@vitessce/neuroglancer 3.9.0 → 3.9.2

package/dist/{ReactNeuroglancer-C3H4HHzG.js → ReactNeuroglancer-DTI8FUjG.js}

@@ -2,7 +2,7 @@ var __defProp = Object.defineProperty;
 var __defNormalProp = (obj, key, value) => key in obj ? __defProp(obj, key, { enumerable: true, configurable: true, writable: true, value }) : obj[key] = value;
 var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "symbol" ? key + "" : key, value);
 import React__default from "react";
-import { g as getDefaultExportFromCjs, c as commonjsGlobal, d as diffCameraState } from "./index-DK1BA3pP.js";
+import { g as getDefaultExportFromCjs, c as commonjsGlobal, d as diffCameraState } from "./index-C5ptEhQz.js";
 var es6_object_assign = {};
 var _global = { exports: {} };
 var hasRequired_global;

package/dist/{index-DK1BA3pP.js → index-C5ptEhQz.js}

@@ -10400,7 +10400,9 @@ const obsSegmentationsSpatialdataSchema = z.object({
 const obsPointsSpatialdataSchema = z.object({
   path: z.string().describe("The path to the point data."),
   tablePath: z.string().optional().describe("The path to a table which annotates the points. If available but not specified, the spot identifiers may not be aligned with associated tabular data as expected."),
-  coordinateSystem: z.string().optional().describe('The name of a coordinate transformation output used to transform the image. If not provided, the "global" coordinate system is assumed.')
+  coordinateSystem: z.string().optional().describe('The name of a coordinate transformation output used to transform the image. If not provided, the "global" coordinate system is assumed.'),
+  featureIndexColumn: z.string().optional().describe("The name of the column in the table which contains the feature (e.g., gene) indices associated with each point (aligned with the table var.index dataframe column)."),
+  mortonCodeColumn: z.string().optional().describe('The name of the column in the table which contains the Morton codes for each point, used for efficient spatial querying. If not provided, Vitessce will assume the default column name "morton_code_2d".')
 });
 z.object({
   path: z.string(),
@@ -25396,21 +25398,20 @@ Popper.Utils = (typeof window !== "undefined" ? window : global).PopperUtils;
 Popper.placements = placements;
 Popper.Defaults = Defaults;
 function createChainedFunction(...funcs) {
-  return funcs.reduce((acc, func) => {
-    if (func == null) {
-      return acc;
-    }
-    {
-      if (typeof func !== "function") {
-        console.error("Material-UI: Invalid Argument Type, must only provide functions, undefined, or null.");
+  return funcs.reduce(
+    (acc, func) => {
+      if (func == null) {
+        return acc;
       }
+      return function chainedFunction(...args) {
+        acc.apply(this, args);
+        func.apply(this, args);
+      };
+    },
+    // eslint-disable-next-line @typescript-eslint/no-empty-function
+    () => {
     }
-    return function chainedFunction(...args) {
-      acc.apply(this, args);
-      func.apply(this, args);
-    };
-  }, () => {
-  });
+  );
 }
 function setRef(ref, value) {
   if (typeof ref === "function") {
@@ -25449,7 +25450,7 @@ function flipPlacement(placement, theme) {
   }
 }
 function getAnchorEl(anchorEl) {
-  return typeof anchorEl === "function" ? anchorEl() : anchorEl;
+  return typeof anchorEl === "function" ? anchorEl(document.body) : anchorEl;
 }
 const useEnhancedEffect = typeof window !== "undefined" ? React$1.useLayoutEffect : React$1.useEffect;
 const defaultPopperOptions = {};
@@ -25479,25 +25480,18 @@ React$1.forwardRef((props, ref) => {
     }
     if (popperRef.current) {
       popperRef.current.destroy();
-      handlePopperRefRef.current(null);
+      if (handlePopperRefRef.current) {
+        setRef(handlePopperRefRef.current, null);
+      }
     }
     const handlePopperUpdate = (data) => {
       setPlacement(data.placement);
     };
-    const resolvedAnchorEl = getAnchorEl(anchorEl);
-    {
-      if (resolvedAnchorEl && resolvedAnchorEl.nodeType === 1) {
-        const box = resolvedAnchorEl.getBoundingClientRect();
-        if (box.top === 0 && box.left === 0 && box.right === 0 && box.bottom === 0) {
-          console.warn([
-            "Material-UI: The `anchorEl` prop provided to the component is invalid.",
-            "The anchor element should be part of the document layout.",
-            "Make sure the element is present in the document or that it's not display none."
-          ].join("\n"));
-        }
-      }
+    const anchorElement = getAnchorEl(anchorEl);
+    if (!anchorElement) {
+      return;
     }
-    const popper = new Popper(getAnchorEl(anchorEl), tooltipRef.current, {
+    const popper = new Popper(anchorElement, tooltipRef.current, {
       placement: rtlPlacement,
       ...popperOptions,
       modifiers: {
@@ -25515,7 +25509,9 @@ React$1.forwardRef((props, ref) => {
       onCreate: createChainedFunction(handlePopperUpdate, popperOptions.onCreate),
       onUpdate: createChainedFunction(handlePopperUpdate, popperOptions.onUpdate)
     });
-    handlePopperRefRef.current(popper);
+    if (handlePopperRefRef.current) {
+      setRef(handlePopperRefRef.current, popper);
+    }
   }, [anchorEl, disablePortal, modifiers2, open, rtlPlacement, popperOptions]);
   const handleRef = React$1.useCallback((node2) => {
     setRef(ownRef, node2);
@@ -25529,7 +25525,9 @@ React$1.forwardRef((props, ref) => {
       return;
     }
     popperRef.current.destroy();
-    handlePopperRefRef.current(null);
+    if (handlePopperRefRef.current) {
+      setRef(handlePopperRefRef.current, null);
+    }
   };
   const handleExited = () => {
     setExited(true);
@@ -25560,7 +25558,7 @@ React$1.forwardRef((props, ref) => {
     // Fix Popper.js display issue
     top: 0,
     left: 0,
-    display: !open && keepMounted && !transition ? "none" : null,
+    display: !open && keepMounted && !transition ? "none" : void 0,
     ...style2
   }, children: typeof children === "function" ? children(childProps) : children }) });
 });
@@ -25575,7 +25573,7 @@ function ScopedGlobalStyles(props) {
   const component = useMemo(() => {
     const computedStyles = prependParentClassName(styles, parentClassName);
     return jsxRuntimeExports.jsx(GlobalStyles, { styles: computedStyles });
-  }, [parentClassName]);
+  }, [parentClassName, styles]);
   return component;
 }
 const useStyles = makeStyles()(() => ({
@@ -28200,7 +28198,7 @@ function NeuroglancerGlobalStyles(props) {
     }
   ));
 }
-const LazyReactNeuroglancer = React__default.lazy(() => import("./ReactNeuroglancer-C3H4HHzG.js"));
+const LazyReactNeuroglancer = React__default.lazy(() => import("./ReactNeuroglancer-DTI8FUjG.js"));
 function createWorker() {
   return new WorkerFactory();
 }

package/dist/index.js

@@ -1,4 +1,4 @@
-import { N } from "./index-DK1BA3pP.js";
+import { N } from "./index-C5ptEhQz.js";
 export {
   N as NeuroglancerSubscriber
 };

package/dist-tsc/styles.d.ts

@@ -1,4 +1,4 @@
-export function NeuroglancerGlobalStyles(props: any): import(".pnpm/@types+react@19.1.6/node_modules/@types/react").JSX.Element;
+export function NeuroglancerGlobalStyles(props: any): import("react").JSX.Element;
 export const useStyles: (params: void, muiStyleOverridesParams?: {
     props: Record<string, unknown>;
     ownerState?: Record<string, unknown> | undefined;

package/dist-tsc/styles.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"styles.d.ts","sourceRoot":"","sources":["../src/styles.js"],"names":[],"mappings":"AAqkFA,gIAcC;AA/kFD;;cAiBe,CAAC;;;kBAIP,eAAsB;gBAChB,WAAU;eAAsB,WACvC;EAlBJ"}
+{"version":3,"file":"styles.d.ts","sourceRoot":"","sources":["../src/styles.js"],"names":[],"mappings":"AAqkFA,kFAcC;AA/kFD;;cAiBe,CAAC;;;kBAIP,eAAsB;gBAChB,WAAU;eAAsB,WACvC;EAlBJ"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/neuroglancer",
-  "version": "3.9.0",
+  "version": "3.9.2",
   "author": "Gehlenborg Lab",
   "homepage": "http://vitessce.io",
   "repository": {
@@ -20,13 +20,13 @@
     "lodash-es": "^4.17.21",
     "three": "^0.154.0",
     "react": "18.3.1",
-    "@vitessce/neuroglancer-workers": "3.9.0",
-    "@vitessce/constants-internal": "3.9.0",
-    "@vitessce/vit-s": "3.9.0",
-    "@vitessce/sets-utils": "3.9.0",
-    "@vitessce/styles": "3.9.0",
-    "@vitessce/utils": "3.9.0",
-    "@vitessce/tooltip": "3.9.0"
+    "@vitessce/neuroglancer-workers": "3.9.2",
+    "@vitessce/constants-internal": "3.9.2",
+    "@vitessce/styles": "3.9.2",
+    "@vitessce/vit-s": "3.9.2",
+    "@vitessce/sets-utils": "3.9.2",
+    "@vitessce/utils": "3.9.2",
+    "@vitessce/tooltip": "3.9.2"
   },
   "devDependencies": {
     "@testing-library/jest-dom": "^6.6.3",