@vitessce/heatmap 3.3.6 → 3.3.8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/{deflate-20721e5b.js → deflate-75c74002.js} +1 -1
- package/dist/{index-18e85616.js → index-c4ad73b8.js} +44 -10
- package/dist/index.js +1 -1
- package/dist/{jpeg-5104bd7b.js → jpeg-28dd50f3.js} +1 -1
- package/dist/{lerc-352d4a39.js → lerc-13f7a96a.js} +1 -1
- package/dist/{lzw-c8a11762.js → lzw-924f5d1f.js} +1 -1
- package/dist/{packbits-c1ce7870.js → packbits-9d1372b3.js} +1 -1
- package/dist/{raw-281b8e76.js → raw-73c6e451.js} +1 -1
- package/dist/{webimage-8edff4f0.js → webimage-d888986b.js} +1 -1
- package/package.json +9 -9
|
@@ -10915,11 +10915,14 @@ const DataType$2 = {
|
|
|
10915
10915
|
GENOMIC_PROFILES: "genomic-profiles",
|
|
10916
10916
|
OBS_SPOTS: "obsSpots",
|
|
10917
10917
|
OBS_POINTS: "obsPoints",
|
|
10918
|
-
OBS_LOCATIONS: "obsLocations"
|
|
10918
|
+
OBS_LOCATIONS: "obsLocations",
|
|
10919
|
+
SAMPLE_SETS: "sampleSets",
|
|
10920
|
+
SAMPLE_EDGES: "sampleEdges"
|
|
10919
10921
|
};
|
|
10920
10922
|
const FileType$1 = {
|
|
10921
10923
|
// Joint file types
|
|
10922
10924
|
ANNDATA_ZARR: "anndata.zarr",
|
|
10925
|
+
ANNDATA_ZARR_ZIP: "anndata.zarr.zip",
|
|
10923
10926
|
SPATIALDATA_ZARR: "spatialdata.zarr",
|
|
10924
10927
|
// Atomic file types
|
|
10925
10928
|
OBS_EMBEDDING_CSV: "obsEmbedding.csv",
|
|
@@ -10932,6 +10935,7 @@ const FileType$1 = {
|
|
|
10932
10935
|
OBS_SEGMENTATIONS_JSON: "obsSegmentations.json",
|
|
10933
10936
|
OBS_SETS_CSV: "obsSets.csv",
|
|
10934
10937
|
OBS_SETS_JSON: "obsSets.json",
|
|
10938
|
+
SAMPLE_SETS_CSV: "sampleSets.csv",
|
|
10935
10939
|
// OME-Zarr
|
|
10936
10940
|
IMAGE_OME_ZARR: "image.ome-zarr",
|
|
10937
10941
|
OBS_SEGMENTATIONS_OME_ZARR: "obsSegmentations.ome-zarr",
|
|
@@ -10946,6 +10950,19 @@ const FileType$1 = {
|
|
|
10946
10950
|
OBS_SEGMENTATIONS_ANNDATA_ZARR: "obsSegmentations.anndata.zarr",
|
|
10947
10951
|
OBS_LABELS_ANNDATA_ZARR: "obsLabels.anndata.zarr",
|
|
10948
10952
|
FEATURE_LABELS_ANNDATA_ZARR: "featureLabels.anndata.zarr",
|
|
10953
|
+
SAMPLE_EDGES_ANNDATA_ZARR: "sampleEdges.anndata.zarr",
|
|
10954
|
+
// AnnData - zipped
|
|
10955
|
+
OBS_FEATURE_MATRIX_ANNDATA_ZARR_ZIP: "obsFeatureMatrix.anndata.zarr.zip",
|
|
10956
|
+
OBS_FEATURE_COLUMNS_ANNDATA_ZARR_ZIP: "obsFeatureColumns.anndata.zarr.zip",
|
|
10957
|
+
OBS_SETS_ANNDATA_ZARR_ZIP: "obsSets.anndata.zarr.zip",
|
|
10958
|
+
OBS_EMBEDDING_ANNDATA_ZARR_ZIP: "obsEmbedding.anndata.zarr.zip",
|
|
10959
|
+
OBS_SPOTS_ANNDATA_ZARR_ZIP: "obsSpots.anndata.zarr.zip",
|
|
10960
|
+
OBS_POINTS_ANNDATA_ZARR_ZIP: "obsPoints.anndata.zarr.zip",
|
|
10961
|
+
OBS_LOCATIONS_ANNDATA_ZARR_ZIP: "obsLocations.anndata.zarr.zip",
|
|
10962
|
+
OBS_SEGMENTATIONS_ANNDATA_ZARR_ZIP: "obsSegmentations.anndata.zarr.zip",
|
|
10963
|
+
OBS_LABELS_ANNDATA_ZARR_ZIP: "obsLabels.anndata.zarr.zip",
|
|
10964
|
+
FEATURE_LABELS_ANNDATA_ZARR_ZIP: "featureLabels.anndata.zarr.zip",
|
|
10965
|
+
SAMPLE_EDGES_ANNDATA_ZARR_ZIP: "sampleEdges.anndata.zarr.zip",
|
|
10949
10966
|
// SpatialData
|
|
10950
10967
|
IMAGE_SPATIALDATA_ZARR: "image.spatialdata.zarr",
|
|
10951
10968
|
LABELS_SPATIALDATA_ZARR: "labels.spatialdata.zarr",
|
|
@@ -10953,6 +10970,7 @@ const FileType$1 = {
|
|
|
10953
10970
|
OBS_FEATURE_MATRIX_SPATIALDATA_ZARR: "obsFeatureMatrix.spatialdata.zarr",
|
|
10954
10971
|
OBS_SETS_SPATIALDATA_ZARR: "obsSets.spatialdata.zarr",
|
|
10955
10972
|
OBS_SPOTS_SPATIALDATA_ZARR: "obsSpots.spatialdata.zarr",
|
|
10973
|
+
FEATURE_LABELS_SPATIALDATA_ZARR: "featureLabels.spatialdata.zarr",
|
|
10956
10974
|
// TODO:
|
|
10957
10975
|
// OBS_POINTS_SPATIALDATA_ZARR: 'obsPoints.spatialdata.zarr',
|
|
10958
10976
|
// OBS_LOCATIONS_SPATIALDATA_ZARR: 'obsLocations.spatialdata.zarr',
|
|
@@ -11109,7 +11127,10 @@ const CoordinationType$1 = {
|
|
|
11109
11127
|
LEGEND_VISIBLE: "legendVisible",
|
|
11110
11128
|
SPATIAL_CHANNEL_LABELS_VISIBLE: "spatialChannelLabelsVisible",
|
|
11111
11129
|
SPATIAL_CHANNEL_LABELS_ORIENTATION: "spatialChannelLabelsOrientation",
|
|
11112
|
-
SPATIAL_CHANNEL_LABEL_SIZE: "spatialChannelLabelSize"
|
|
11130
|
+
SPATIAL_CHANNEL_LABEL_SIZE: "spatialChannelLabelSize",
|
|
11131
|
+
// Multi-sample / comparative
|
|
11132
|
+
SAMPLE_TYPE: "sampleType",
|
|
11133
|
+
SAMPLE_SET_SELECTION: "sampleSetSelection"
|
|
11113
11134
|
};
|
|
11114
11135
|
const COMPONENT_COORDINATION_TYPES = {
|
|
11115
11136
|
[ViewType$1.SCATTERPLOT]: [
|
|
@@ -11357,7 +11378,9 @@ const COMPONENT_COORDINATION_TYPES = {
|
|
|
11357
11378
|
CoordinationType$1.OBS_SET_SELECTION,
|
|
11358
11379
|
CoordinationType$1.OBS_SET_HIGHLIGHT,
|
|
11359
11380
|
CoordinationType$1.OBS_SET_COLOR,
|
|
11360
|
-
CoordinationType$1.ADDITIONAL_OBS_SETS
|
|
11381
|
+
CoordinationType$1.ADDITIONAL_OBS_SETS,
|
|
11382
|
+
CoordinationType$1.SAMPLE_TYPE,
|
|
11383
|
+
CoordinationType$1.SAMPLE_SET_SELECTION
|
|
11361
11384
|
],
|
|
11362
11385
|
[ViewType$1.FEATURE_VALUE_HISTOGRAM]: [
|
|
11363
11386
|
CoordinationType$1.DATASET,
|
|
@@ -11836,6 +11859,17 @@ z.object({
|
|
|
11836
11859
|
scoreColumn: z.string().optional()
|
|
11837
11860
|
}))
|
|
11838
11861
|
});
|
|
11862
|
+
z.object({
|
|
11863
|
+
sampleIndex: z.string(),
|
|
11864
|
+
sampleSets: z.array(z.object({
|
|
11865
|
+
name: z.string(),
|
|
11866
|
+
column: z.union([
|
|
11867
|
+
z.string(),
|
|
11868
|
+
z.array(z.string())
|
|
11869
|
+
]),
|
|
11870
|
+
scoreColumn: z.string().optional()
|
|
11871
|
+
}))
|
|
11872
|
+
});
|
|
11839
11873
|
z.object({
|
|
11840
11874
|
obsLabels: z.union([
|
|
11841
11875
|
annDataObsLabels,
|
|
@@ -132648,16 +132682,16 @@ function addDecoder(cases, importFn) {
|
|
|
132648
132682
|
}
|
|
132649
132683
|
cases.forEach((c) => registry$1.set(c, importFn));
|
|
132650
132684
|
}
|
|
132651
|
-
addDecoder([void 0, 1], () => import("./raw-
|
|
132652
|
-
addDecoder(5, () => import("./lzw-
|
|
132685
|
+
addDecoder([void 0, 1], () => import("./raw-73c6e451.js").then((m) => m.default));
|
|
132686
|
+
addDecoder(5, () => import("./lzw-924f5d1f.js").then((m) => m.default));
|
|
132653
132687
|
addDecoder(6, () => {
|
|
132654
132688
|
throw new Error("old style JPEG compression is not supported.");
|
|
132655
132689
|
});
|
|
132656
|
-
addDecoder(7, () => import("./jpeg-
|
|
132657
|
-
addDecoder([8, 32946], () => import("./deflate-
|
|
132658
|
-
addDecoder(32773, () => import("./packbits-
|
|
132659
|
-
addDecoder(34887, () => import("./lerc-
|
|
132660
|
-
addDecoder(50001, () => import("./webimage-
|
|
132690
|
+
addDecoder(7, () => import("./jpeg-28dd50f3.js").then((m) => m.default));
|
|
132691
|
+
addDecoder([8, 32946], () => import("./deflate-75c74002.js").then((m) => m.default));
|
|
132692
|
+
addDecoder(32773, () => import("./packbits-9d1372b3.js").then((m) => m.default));
|
|
132693
|
+
addDecoder(34887, () => import("./lerc-13f7a96a.js").then((m) => m.default));
|
|
132694
|
+
addDecoder(50001, () => import("./webimage-d888986b.js").then((m) => m.default));
|
|
132661
132695
|
function decodeRowAcc(row, stride) {
|
|
132662
132696
|
let length2 = row.length - stride;
|
|
132663
132697
|
let offset5 = 0;
|
package/dist/index.js
CHANGED
|
@@ -1,5 +1,5 @@
|
|
|
1
1
|
import { i as inflate_1 } from "./pako.esm-68f84e2a.js";
|
|
2
|
-
import { g as getDefaultExportFromCjs, B as BaseDecoder } from "./index-
|
|
2
|
+
import { g as getDefaultExportFromCjs, B as BaseDecoder } from "./index-c4ad73b8.js";
|
|
3
3
|
import "react";
|
|
4
4
|
import "@vitessce/vit-s";
|
|
5
5
|
import "react-dom";
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@vitessce/heatmap",
|
|
3
|
-
"version": "3.3.
|
|
3
|
+
"version": "3.3.8",
|
|
4
4
|
"author": "Gehlenborg Lab",
|
|
5
5
|
"homepage": "http://vitessce.io",
|
|
6
6
|
"repository": {
|
|
@@ -20,14 +20,14 @@
|
|
|
20
20
|
"lodash-es": "^4.17.21",
|
|
21
21
|
"uuid": "^9.0.0",
|
|
22
22
|
"react-aria": "^3.28.0",
|
|
23
|
-
"@vitessce/constants-internal": "3.3.
|
|
24
|
-
"@vitessce/
|
|
25
|
-
"@vitessce/
|
|
26
|
-
"@vitessce/
|
|
27
|
-
"@vitessce/tooltip": "3.3.
|
|
28
|
-
"@vitessce/
|
|
29
|
-
"@vitessce/
|
|
30
|
-
"@vitessce/
|
|
23
|
+
"@vitessce/constants-internal": "3.3.8",
|
|
24
|
+
"@vitessce/gl": "3.3.8",
|
|
25
|
+
"@vitessce/legend": "3.3.8",
|
|
26
|
+
"@vitessce/sets-utils": "3.3.8",
|
|
27
|
+
"@vitessce/tooltip": "3.3.8",
|
|
28
|
+
"@vitessce/vit-s": "3.3.8",
|
|
29
|
+
"@vitessce/workers": "3.3.8",
|
|
30
|
+
"@vitessce/utils": "3.3.8"
|
|
31
31
|
},
|
|
32
32
|
"devDependencies": {
|
|
33
33
|
"@testing-library/jest-dom": "^5.16.4",
|