@vitessce/constants-internal 3.9.5 → 3.9.6

package/dist/index.js

@@ -188,6 +188,7 @@ const FileType = {
   // Neuroglancer
   // Precomputed (mesh) format
   OBS_SEGMENTATIONS_NG_PRECOMPUTED: "obsSegmentations.ng-precomputed",
+  OBS_POINTS_NG_ANNOTATIONS: "obsPoints.ng-annotations",
   // New file types to support old file types:
   // - cells.json
   OBS_EMBEDDING_CELLS_JSON: "obsEmbedding.cells.json",
@@ -397,7 +398,7 @@ const ViewHelpMapping = {
   FEATURE_VALUE_HISTOGRAM: "The feature value histogram displays the distribution of values (e.g., expression) for the selected feature (e.g., gene).",
   DOT_PLOT: "The dot plot displays summary information about expression of the selected features (e.g., genes) for each selected observation set (e.g., cell type).",
   FEATURE_BAR_PLOT: "The feature bar plot displays one bar per observation (e.g., cell) along the x-axis, where the value of a selected feature (e.g., gene) is encoded along the y-axis.",
-  NEUROGLANCER: "The Neuroglancer view displays 3d meshes using Neuroglancer developed by Google.",
+  NEUROGLANCER: "This view displays 3D meshes and points using Neuroglancer developed by Google.",
   TREEMAP: "The treemap provides an overview of the current state of sample-level or cell-level selection and filtering.",
   VOLCANO_PLOT: "The volcano plot displays differential expression results. Each data point represents a feature (as opposed to an observation).",
   OBS_SET_COMPOSITION_BAR_PLOT: "The set composition bar plot displays the results of a compositional analysis conducted using the scCODA method (Büttner et al. 2021 Nature Communications).",
@@ -449,6 +450,7 @@ const FILE_TYPE_DATA_TYPE_MAPPING = {
   [FileType.FEATURE_LABELS_MUDATA_ZARR]: DataType.FEATURE_LABELS,
   [FileType.OBS_SEGMENTATIONS_GLB]: DataType.OBS_SEGMENTATIONS,
   [FileType.OBS_SEGMENTATIONS_NG_PRECOMPUTED]: DataType.OBS_SEGMENTATIONS,
+  [FileType.OBS_POINTS_NG_ANNOTATIONS]: DataType.OBS_POINTS,
   [FileType.IMAGE_SPATIALDATA_ZARR]: DataType.IMAGE,
   [FileType.LABELS_SPATIALDATA_ZARR]: DataType.OBS_SEGMENTATIONS,
   [FileType.SHAPES_SPATIALDATA_ZARR]: DataType.OBS_SEGMENTATIONS,
@@ -668,6 +670,8 @@ const AUTO_INDEPENDENT_COORDINATION_TYPES = [
 ];
 const COMPONENT_COORDINATION_TYPES = {
   [ViewType.NEUROGLANCER]: [
+    CoordinationType.META_COORDINATION_SCOPES,
+    CoordinationType.META_COORDINATION_SCOPES_BY,
     CoordinationType.DATASET,
     CoordinationType.SPATIAL_TARGET_X,
     CoordinationType.SPATIAL_TARGET_Y,
@@ -689,7 +693,26 @@ const COMPONENT_COORDINATION_TYPES = {
     CoordinationType.OBS_COLOR_ENCODING,
     CoordinationType.EMBEDDING_TYPE,
     CoordinationType.ADDITIONAL_OBS_SETS,
-    CoordinationType.TOOLTIPS_VISIBLE
+    CoordinationType.TOOLTIPS_VISIBLE,
+    CoordinationType.FILE_UID,
+    CoordinationType.IMAGE_LAYER,
+    CoordinationType.SEGMENTATION_LAYER,
+    CoordinationType.IMAGE_CHANNEL,
+    CoordinationType.SEGMENTATION_CHANNEL,
+    CoordinationType.POINT_LAYER,
+    CoordinationType.FEATURE_COLOR,
+    CoordinationType.FEATURE_FILTER_MODE,
+    CoordinationType.FEATURE_HIGHLIGHT,
+    CoordinationType.FEATURE_SELECTION,
+    CoordinationType.FEATURE_VALUE_COLORMAP,
+    CoordinationType.FEATURE_VALUE_COLORMAP_RANGE,
+    CoordinationType.SPATIAL_LAYER_COLOR,
+    CoordinationType.SPATIAL_LAYER_OPACITY,
+    CoordinationType.SPATIAL_LAYER_VISIBLE,
+    CoordinationType.SPATIAL_CHANNEL_COLOR,
+    CoordinationType.SPATIAL_CHANNEL_OPACITY,
+    CoordinationType.SPATIAL_CHANNEL_VISIBLE,
+    CoordinationType.LEGEND_VISIBLE
   ],
   [ViewType.SCATTERPLOT]: [
     CoordinationType.DATASET,
@@ -1328,10 +1351,10 @@ const COMPONENT_COORDINATION_TYPES = {
   ]
 };
 const note = "This file is autogenerated by .changeset/post-changelog.mjs.";
-const version = "3.9.5";
-const date = "2026-02-23";
+const version = "3.9.6";
+const date = "2026-03-26";
 const branch = "changeset-release/main";
-const hash = "83e3d297";
+const hash = "36296438";
 const version$1 = {
   note,
   version,

package/dist-tsc/constant-relationships.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"constant-relationships.d.ts","sourceRoot":"","sources":["../src/constant-relationships.ts"],"names":[],"mappings":"AAEA;;;;GAIG;AACH,eAAO,MAAM,2BAA2B;;CAuEvC,CAAC;AAEF;;;;GAIG;AACH,eAAO,MAAM,kCAAkC;;CA6D9C,CAAC;AAKF,eAAO,MAAM,oBAAoB;;;;;;;;CAuGhC,CAAC"}
+{"version":3,"file":"constant-relationships.d.ts","sourceRoot":"","sources":["../src/constant-relationships.ts"],"names":[],"mappings":"AAEA;;;;GAIG;AACH,eAAO,MAAM,2BAA2B;;CAwEvC,CAAC;AAEF;;;;GAIG;AACH,eAAO,MAAM,kCAAkC;;CA6D9C,CAAC;AAKF,eAAO,MAAM,oBAAoB;;;;;;;;CAuGhC,CAAC"}

package/dist-tsc/constant-relationships.js

@@ -48,6 +48,7 @@ export const FILE_TYPE_DATA_TYPE_MAPPING = {
     [FileType.FEATURE_LABELS_MUDATA_ZARR]: DataType.FEATURE_LABELS,
     [FileType.OBS_SEGMENTATIONS_GLB]: DataType.OBS_SEGMENTATIONS,
     [FileType.OBS_SEGMENTATIONS_NG_PRECOMPUTED]: DataType.OBS_SEGMENTATIONS,
+    [FileType.OBS_POINTS_NG_ANNOTATIONS]: DataType.OBS_POINTS,
     [FileType.IMAGE_SPATIALDATA_ZARR]: DataType.IMAGE,
     [FileType.LABELS_SPATIALDATA_ZARR]: DataType.OBS_SEGMENTATIONS,
     [FileType.SHAPES_SPATIALDATA_ZARR]: DataType.OBS_SEGMENTATIONS,

package/dist-tsc/constants.d.ts

@@ -167,6 +167,7 @@ export declare const FileType: {
     OBS_SEGMENTATIONS_OME_TIFF: string;
     OBS_SEGMENTATIONS_GLB: string;
     OBS_SEGMENTATIONS_NG_PRECOMPUTED: string;
+    OBS_POINTS_NG_ANNOTATIONS: string;
     OBS_EMBEDDING_CELLS_JSON: string;
     OBS_SEGMENTATIONS_CELLS_JSON: string;
     OBS_LOCATIONS_CELLS_JSON: string;

package/dist-tsc/constants.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"constants.d.ts","sourceRoot":"","sources":["../src/constants.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AACH,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA+BpB,CAAC;AAEF,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;CAmBpB,CAAC;AAEF,eAAO,MAAM,iBAAiB;;;;;;;;;;CAc7B,CAAC;AAEF,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA2JpB,CAAC;AAEF;;;GAGG;AACH,eAAO,MAAM,gBAAgB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA+I5B,CAAC;AAEF,eAAO,MAAM,MAAM;;;;CAIlB,CAAC;AAEF,eAAO,MAAM,eAAe;;;CAG3B,CAAC;AAEF;;;GAGG;AACH,eAAO,MAAM,eAAe;;;;;;;;;;;;;;;;;;;;;;;CAuB3B,CAAC"}
+{"version":3,"file":"constants.d.ts","sourceRoot":"","sources":["../src/constants.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AACH,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA+BpB,CAAC;AAEF,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;CAmBpB,CAAC;AAEF,eAAO,MAAM,iBAAiB;;;;;;;;;;CAc7B,CAAC;AAEF,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA4JpB,CAAC;AAEF;;;GAGG;AACH,eAAO,MAAM,gBAAgB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA+I5B,CAAC;AAEF,eAAO,MAAM,MAAM;;;;CAIlB,CAAC;AAEF,eAAO,MAAM,eAAe;;;CAG3B,CAAC;AAEF;;;GAGG;AACH,eAAO,MAAM,eAAe;;;;;;;;;;;;;;;;;;;;;;;CAuB3B,CAAC"}

package/dist-tsc/constants.js

@@ -184,6 +184,7 @@ export const FileType = {
     // Neuroglancer
     // Precomputed (mesh) format
     OBS_SEGMENTATIONS_NG_PRECOMPUTED: 'obsSegmentations.ng-precomputed',
+    OBS_POINTS_NG_ANNOTATIONS: 'obsPoints.ng-annotations',
     // New file types to support old file types:
     // - cells.json
     OBS_EMBEDDING_CELLS_JSON: 'obsEmbedding.cells.json',
@@ -394,7 +395,7 @@ export const ViewHelpMapping = {
     FEATURE_VALUE_HISTOGRAM: 'The feature value histogram displays the distribution of values (e.g., expression) for the selected feature (e.g., gene).',
     DOT_PLOT: 'The dot plot displays summary information about expression of the selected features (e.g., genes) for each selected observation set (e.g., cell type).',
     FEATURE_BAR_PLOT: 'The feature bar plot displays one bar per observation (e.g., cell) along the x-axis, where the value of a selected feature (e.g., gene) is encoded along the y-axis.',
-    NEUROGLANCER: 'The Neuroglancer view displays 3d meshes using Neuroglancer developed by Google.',
+    NEUROGLANCER: 'This view displays 3D meshes and points using Neuroglancer developed by Google.',
     TREEMAP: 'The treemap provides an overview of the current state of sample-level or cell-level selection and filtering.',
     VOLCANO_PLOT: 'The volcano plot displays differential expression results. Each data point represents a feature (as opposed to an observation).',
     OBS_SET_COMPOSITION_BAR_PLOT: 'The set composition bar plot displays the results of a compositional analysis conducted using the scCODA method (Büttner et al. 2021 Nature Communications).',

package/dist-tsc/coordination.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"coordination.d.ts","sourceRoot":"","sources":["../src/coordination.ts"],"names":[],"mappings":"AASA,eAAO,MAAM,mCAAmC,UA0B/C,CAAC;AAEF;;;;;;;KAOK;AACL,eAAO,MAAM,4BAA4B;;;CAqpBxC,CAAC"}
+{"version":3,"file":"coordination.d.ts","sourceRoot":"","sources":["../src/coordination.ts"],"names":[],"mappings":"AASA,eAAO,MAAM,mCAAmC,UA0B/C,CAAC;AAEF;;;;;;;KAOK;AACL,eAAO,MAAM,4BAA4B;;;CAyqBxC,CAAC"}

package/dist-tsc/coordination.js

@@ -43,6 +43,8 @@ export const AUTO_INDEPENDENT_COORDINATION_TYPES = [
    */
 export const COMPONENT_COORDINATION_TYPES = {
     [ViewType.NEUROGLANCER]: [
+        CoordinationType.META_COORDINATION_SCOPES,
+        CoordinationType.META_COORDINATION_SCOPES_BY,
         CoordinationType.DATASET,
         CoordinationType.SPATIAL_TARGET_X,
         CoordinationType.SPATIAL_TARGET_Y,
@@ -65,6 +67,25 @@ export const COMPONENT_COORDINATION_TYPES = {
         CoordinationType.EMBEDDING_TYPE,
         CoordinationType.ADDITIONAL_OBS_SETS,
         CoordinationType.TOOLTIPS_VISIBLE,
+        CoordinationType.FILE_UID,
+        CoordinationType.IMAGE_LAYER,
+        CoordinationType.SEGMENTATION_LAYER,
+        CoordinationType.IMAGE_CHANNEL,
+        CoordinationType.SEGMENTATION_CHANNEL,
+        CoordinationType.POINT_LAYER,
+        CoordinationType.FEATURE_COLOR,
+        CoordinationType.FEATURE_FILTER_MODE,
+        CoordinationType.FEATURE_HIGHLIGHT,
+        CoordinationType.FEATURE_SELECTION,
+        CoordinationType.FEATURE_VALUE_COLORMAP,
+        CoordinationType.FEATURE_VALUE_COLORMAP_RANGE,
+        CoordinationType.SPATIAL_LAYER_COLOR,
+        CoordinationType.SPATIAL_LAYER_OPACITY,
+        CoordinationType.SPATIAL_LAYER_VISIBLE,
+        CoordinationType.SPATIAL_CHANNEL_COLOR,
+        CoordinationType.SPATIAL_CHANNEL_OPACITY,
+        CoordinationType.SPATIAL_CHANNEL_VISIBLE,
+        CoordinationType.LEGEND_VISIBLE,
     ],
     [ViewType.SCATTERPLOT]: [
         CoordinationType.DATASET,

package/dist-tsc/version.json

@@ -1,7 +1,7 @@
 {
     "note": "This file is autogenerated by .changeset/post-changelog.mjs.",
-    "version": "3.9.5",
-    "date": "2026-02-23",
+    "version": "3.9.6",
+    "date": "2026-03-26",
     "branch": "changeset-release/main",
-    "hash": "83e3d297"
+    "hash": "36296438"
 }

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/constants-internal",
-  "version": "3.9.5",
+  "version": "3.9.6",
   "author": "HIDIVE Lab at HMS",
   "homepage": "http://vitessce.io",
   "repository": {

package/src/constant-relationships.ts

@@ -49,6 +49,7 @@ export const FILE_TYPE_DATA_TYPE_MAPPING = {
   [FileType.FEATURE_LABELS_MUDATA_ZARR]: DataType.FEATURE_LABELS,
   [FileType.OBS_SEGMENTATIONS_GLB]: DataType.OBS_SEGMENTATIONS,
   [FileType.OBS_SEGMENTATIONS_NG_PRECOMPUTED]: DataType.OBS_SEGMENTATIONS,
+  [FileType.OBS_POINTS_NG_ANNOTATIONS]: DataType.OBS_POINTS,
 
   [FileType.IMAGE_SPATIALDATA_ZARR]: DataType.IMAGE,
   [FileType.LABELS_SPATIALDATA_ZARR]: DataType.OBS_SEGMENTATIONS,

package/src/constants.ts

@@ -196,6 +196,7 @@ export const FileType = {
   // Neuroglancer
   // Precomputed (mesh) format
   OBS_SEGMENTATIONS_NG_PRECOMPUTED: 'obsSegmentations.ng-precomputed',
+  OBS_POINTS_NG_ANNOTATIONS: 'obsPoints.ng-annotations',
   // New file types to support old file types:
   // - cells.json
   OBS_EMBEDDING_CELLS_JSON: 'obsEmbedding.cells.json',
@@ -410,7 +411,7 @@ export const ViewHelpMapping = {
   FEATURE_VALUE_HISTOGRAM: 'The feature value histogram displays the distribution of values (e.g., expression) for the selected feature (e.g., gene).',
   DOT_PLOT: 'The dot plot displays summary information about expression of the selected features (e.g., genes) for each selected observation set (e.g., cell type).',
   FEATURE_BAR_PLOT: 'The feature bar plot displays one bar per observation (e.g., cell) along the x-axis, where the value of a selected feature (e.g., gene) is encoded along the y-axis.',
-  NEUROGLANCER: 'The Neuroglancer view displays 3d meshes using Neuroglancer developed by Google.',
+  NEUROGLANCER: 'This view displays 3D meshes and points using Neuroglancer developed by Google.',
   TREEMAP: 'The treemap provides an overview of the current state of sample-level or cell-level selection and filtering.',
   VOLCANO_PLOT: 'The volcano plot displays differential expression results. Each data point represents a feature (as opposed to an observation).',
   OBS_SET_COMPOSITION_BAR_PLOT: 'The set composition bar plot displays the results of a compositional analysis conducted using the scCODA method (Büttner et al. 2021 Nature Communications).',

package/src/coordination.ts

@@ -45,6 +45,8 @@ export const AUTO_INDEPENDENT_COORDINATION_TYPES = [
    */
 export const COMPONENT_COORDINATION_TYPES = {
   [ViewType.NEUROGLANCER]: [
+    CoordinationType.META_COORDINATION_SCOPES,
+    CoordinationType.META_COORDINATION_SCOPES_BY,
     CoordinationType.DATASET,
     CoordinationType.SPATIAL_TARGET_X,
     CoordinationType.SPATIAL_TARGET_Y,
@@ -67,7 +69,25 @@ export const COMPONENT_COORDINATION_TYPES = {
     CoordinationType.EMBEDDING_TYPE,
     CoordinationType.ADDITIONAL_OBS_SETS,
     CoordinationType.TOOLTIPS_VISIBLE,
-
+    CoordinationType.FILE_UID,
+    CoordinationType.IMAGE_LAYER,
+    CoordinationType.SEGMENTATION_LAYER,
+    CoordinationType.IMAGE_CHANNEL,
+    CoordinationType.SEGMENTATION_CHANNEL,
+    CoordinationType.POINT_LAYER,
+    CoordinationType.FEATURE_COLOR,
+    CoordinationType.FEATURE_FILTER_MODE,
+    CoordinationType.FEATURE_HIGHLIGHT,
+    CoordinationType.FEATURE_SELECTION,
+    CoordinationType.FEATURE_VALUE_COLORMAP,
+    CoordinationType.FEATURE_VALUE_COLORMAP_RANGE,
+    CoordinationType.SPATIAL_LAYER_COLOR,
+    CoordinationType.SPATIAL_LAYER_OPACITY,
+    CoordinationType.SPATIAL_LAYER_VISIBLE,
+    CoordinationType.SPATIAL_CHANNEL_COLOR,
+    CoordinationType.SPATIAL_CHANNEL_OPACITY,
+    CoordinationType.SPATIAL_CHANNEL_VISIBLE,
+    CoordinationType.LEGEND_VISIBLE,
   ],
   [ViewType.SCATTERPLOT]: [
     CoordinationType.DATASET,

package/src/version.json

@@ -1,7 +1,7 @@
 {
   "note": "This file is autogenerated by .changeset/post-changelog.mjs.",
-  "version": "3.9.5",
-  "date": "2026-02-23",
+  "version": "3.9.6",
+  "date": "2026-03-26",
   "branch": "changeset-release/main",
-  "hash": "83e3d297"
+  "hash": "36296438"
 }