@vitessce/constants-internal 3.6.2 → 3.6.4

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Files changed (11) hide show
  1. package/dist/index.js +34 -3
  2. package/dist-tsc/constant-relationships.d.ts.map +1 -1
  3. package/dist-tsc/constant-relationships.js +22 -0
  4. package/dist-tsc/constants.d.ts +8 -0
  5. package/dist-tsc/constants.d.ts.map +1 -1
  6. package/dist-tsc/constants.js +9 -0
  7. package/dist-tsc/version.json +3 -3
  8. package/package.json +1 -1
  9. package/src/constant-relationships.ts +23 -0
  10. package/src/constants.ts +10 -0
  11. package/src/version.json +3 -3
package/dist/index.js CHANGED
@@ -76,6 +76,7 @@ const FileType = {
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  ANNDATA_ZARR_ZIP: "anndata.zarr.zip",
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  ANNDATA_H5AD: "anndata.h5ad",
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  SPATIALDATA_ZARR: "spatialdata.zarr",
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+ SPATIALDATA_ZARR_ZIP: "spatialdata.zarr.zip",
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  // Atomic file types
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  OBS_EMBEDDING_CSV: "obsEmbedding.csv",
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  OBS_SPOTS_CSV: "obsSpots.csv",
@@ -156,6 +157,14 @@ const FileType = {
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  // TODO:
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  // OBS_POINTS_SPATIALDATA_ZARR: 'obsPoints.spatialdata.zarr',
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  // OBS_LOCATIONS_SPATIALDATA_ZARR: 'obsLocations.spatialdata.zarr',
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+ // SpatialData - zipped
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+ IMAGE_SPATIALDATA_ZARR_ZIP: "image.spatialdata.zarr.zip",
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+ LABELS_SPATIALDATA_ZARR_ZIP: "labels.spatialdata.zarr.zip",
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+ SHAPES_SPATIALDATA_ZARR_ZIP: "shapes.spatialdata.zarr.zip",
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+ OBS_FEATURE_MATRIX_SPATIALDATA_ZARR_ZIP: "obsFeatureMatrix.spatialdata.zarr.zip",
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+ OBS_SETS_SPATIALDATA_ZARR_ZIP: "obsSets.spatialdata.zarr.zip",
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+ OBS_SPOTS_SPATIALDATA_ZARR_ZIP: "obsSpots.spatialdata.zarr.zip",
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+ FEATURE_LABELS_SPATIALDATA_ZARR_ZIP: "featureLabels.spatialdata.zarr.zip",
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  // MuData
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  OBS_FEATURE_MATRIX_MUDATA_ZARR: "obsFeatureMatrix.mudata.zarr",
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  OBS_SETS_MUDATA_ZARR: "obsSets.mudata.zarr",
@@ -586,6 +595,28 @@ const ALT_ZARR_STORE_TYPES = {
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  },
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  [FileType.OBS_SEGMENTATIONS_OME_ZARR]: {
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  zip: FileType.OBS_SEGMENTATIONS_OME_ZARR_ZIP
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+ },
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+ // For SpatialData:
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+ [FileType.IMAGE_SPATIALDATA_ZARR]: {
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+ zip: FileType.IMAGE_SPATIALDATA_ZARR_ZIP
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+ },
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+ [FileType.LABELS_SPATIALDATA_ZARR]: {
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+ zip: FileType.LABELS_SPATIALDATA_ZARR_ZIP
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+ },
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+ [FileType.SHAPES_SPATIALDATA_ZARR]: {
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+ zip: FileType.SHAPES_SPATIALDATA_ZARR_ZIP
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+ },
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+ [FileType.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR]: {
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+ zip: FileType.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR_ZIP
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+ },
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+ [FileType.OBS_SETS_SPATIALDATA_ZARR]: {
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+ zip: FileType.OBS_SETS_SPATIALDATA_ZARR_ZIP
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+ },
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+ [FileType.OBS_SPOTS_SPATIALDATA_ZARR]: {
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+ zip: FileType.OBS_SPOTS_SPATIALDATA_ZARR_ZIP
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+ },
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+ [FileType.FEATURE_LABELS_SPATIALDATA_ZARR]: {
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+ zip: FileType.FEATURE_LABELS_SPATIALDATA_ZARR_ZIP
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  }
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  };
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  const AUTO_INDEPENDENT_COORDINATION_TYPES = [
@@ -1261,10 +1292,10 @@ const COMPONENT_COORDINATION_TYPES = {
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  ]
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  };
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  const note = "This file is autogenerated by .changeset/post-changelog.mjs.";
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- const version = "3.6.2";
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- const date = "2025-06-03";
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+ const version = "3.6.4";
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+ const date = "2025-07-02";
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  const branch = "changeset-release/main";
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- const hash = "a638552d";
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+ const hash = "69483719";
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  const version$1 = {
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  note,
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  version,
package/dist-tsc/constant-relationships.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"constant-relationships.d.ts","sourceRoot":"","sources":["../src/constant-relationships.ts"],"names":[],"mappings":"AAEA;;;;GAIG;AACH,eAAO,MAAM,2BAA2B;;CAoEvC,CAAC;AAEF;;;;GAIG;AACH,eAAO,MAAM,kCAAkC;;CA6D9C,CAAC;AAKF,eAAO,MAAM,oBAAoB;;;;;;;;CA0EhC,CAAC"}
1
+ {"version":3,"file":"constant-relationships.d.ts","sourceRoot":"","sources":["../src/constant-relationships.ts"],"names":[],"mappings":"AAEA;;;;GAIG;AACH,eAAO,MAAM,2BAA2B;;CAoEvC,CAAC;AAEF;;;;GAIG;AACH,eAAO,MAAM,kCAAkC;;CA6D9C,CAAC;AAKF,eAAO,MAAM,oBAAoB;;;;;;;;CAiGhC,CAAC"}
package/dist-tsc/constant-relationships.js CHANGED
@@ -214,4 +214,26 @@ export const ALT_ZARR_STORE_TYPES = {
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  [FileType.OBS_SEGMENTATIONS_OME_ZARR]: {
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  zip: FileType.OBS_SEGMENTATIONS_OME_ZARR_ZIP,
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  },
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+ // For SpatialData:
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+ [FileType.IMAGE_SPATIALDATA_ZARR]: {
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+ zip: FileType.IMAGE_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.LABELS_SPATIALDATA_ZARR]: {
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+ zip: FileType.LABELS_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.SHAPES_SPATIALDATA_ZARR]: {
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+ zip: FileType.SHAPES_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR]: {
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+ zip: FileType.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.OBS_SETS_SPATIALDATA_ZARR]: {
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+ zip: FileType.OBS_SETS_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.OBS_SPOTS_SPATIALDATA_ZARR]: {
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+ zip: FileType.OBS_SPOTS_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.FEATURE_LABELS_SPATIALDATA_ZARR]: {
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+ zip: FileType.FEATURE_LABELS_SPATIALDATA_ZARR_ZIP,
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+ },
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  };
package/dist-tsc/constants.d.ts CHANGED
@@ -69,6 +69,7 @@ export declare const FileType: {
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  ANNDATA_ZARR_ZIP: string;
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  ANNDATA_H5AD: string;
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  SPATIALDATA_ZARR: string;
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+ SPATIALDATA_ZARR_ZIP: string;
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  OBS_EMBEDDING_CSV: string;
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  OBS_SPOTS_CSV: string;
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  OBS_POINTS_CSV: string;
@@ -139,6 +140,13 @@ export declare const FileType: {
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  OBS_SETS_SPATIALDATA_ZARR: string;
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  OBS_SPOTS_SPATIALDATA_ZARR: string;
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  FEATURE_LABELS_SPATIALDATA_ZARR: string;
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+ IMAGE_SPATIALDATA_ZARR_ZIP: string;
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+ LABELS_SPATIALDATA_ZARR_ZIP: string;
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+ SHAPES_SPATIALDATA_ZARR_ZIP: string;
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+ OBS_FEATURE_MATRIX_SPATIALDATA_ZARR_ZIP: string;
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+ OBS_SETS_SPATIALDATA_ZARR_ZIP: string;
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+ OBS_SPOTS_SPATIALDATA_ZARR_ZIP: string;
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+ FEATURE_LABELS_SPATIALDATA_ZARR_ZIP: string;
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  OBS_FEATURE_MATRIX_MUDATA_ZARR: string;
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  OBS_SETS_MUDATA_ZARR: string;
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  OBS_EMBEDDING_MUDATA_ZARR: string;
package/dist-tsc/constants.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"constants.d.ts","sourceRoot":"","sources":["../src/constants.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AACH,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA6BpB,CAAC;AAEF,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;CAmBpB,CAAC;AAEF,eAAO,MAAM,iBAAiB;;;;;;;;;;CAc7B,CAAC;AAEF,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA4IpB,CAAC;AAEF;;;GAGG;AACH,eAAO,MAAM,gBAAgB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA4I5B,CAAC;AAEF,eAAO,MAAM,MAAM;;;;CAIlB,CAAC;AAEF,eAAO,MAAM,eAAe;;;CAG3B,CAAC;AAEF;;;GAGG;AACH,eAAO,MAAM,eAAe;;;;;;;;;;;;;;;;;;;;;;;CAuB3B,CAAC"}
1
+ {"version":3,"file":"constants.d.ts","sourceRoot":"","sources":["../src/constants.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AACH,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA6BpB,CAAC;AAEF,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;CAmBpB,CAAC;AAEF,eAAO,MAAM,iBAAiB;;;;;;;;;;CAc7B,CAAC;AAEF,eAAO,MAAM,QAAQ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CAsJpB,CAAC;AAEF;;;GAGG;AACH,eAAO,MAAM,gBAAgB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA4I5B,CAAC;AAEF,eAAO,MAAM,MAAM;;;;CAIlB,CAAC;AAEF,eAAO,MAAM,eAAe;;;CAG3B,CAAC;AAEF;;;GAGG;AACH,eAAO,MAAM,eAAe;;;;;;;;;;;;;;;;;;;;;;;CAuB3B,CAAC"}
package/dist-tsc/constants.js CHANGED
@@ -72,6 +72,7 @@ export const FileType = {
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  ANNDATA_ZARR_ZIP: 'anndata.zarr.zip',
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  ANNDATA_H5AD: 'anndata.h5ad',
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  SPATIALDATA_ZARR: 'spatialdata.zarr',
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+ SPATIALDATA_ZARR_ZIP: 'spatialdata.zarr.zip',
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  // Atomic file types
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  OBS_EMBEDDING_CSV: 'obsEmbedding.csv',
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  OBS_SPOTS_CSV: 'obsSpots.csv',
@@ -152,6 +153,14 @@ export const FileType = {
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  // TODO:
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  // OBS_POINTS_SPATIALDATA_ZARR: 'obsPoints.spatialdata.zarr',
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  // OBS_LOCATIONS_SPATIALDATA_ZARR: 'obsLocations.spatialdata.zarr',
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+ // SpatialData - zipped
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+ IMAGE_SPATIALDATA_ZARR_ZIP: 'image.spatialdata.zarr.zip',
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+ LABELS_SPATIALDATA_ZARR_ZIP: 'labels.spatialdata.zarr.zip',
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+ SHAPES_SPATIALDATA_ZARR_ZIP: 'shapes.spatialdata.zarr.zip',
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+ OBS_FEATURE_MATRIX_SPATIALDATA_ZARR_ZIP: 'obsFeatureMatrix.spatialdata.zarr.zip',
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+ OBS_SETS_SPATIALDATA_ZARR_ZIP: 'obsSets.spatialdata.zarr.zip',
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+ OBS_SPOTS_SPATIALDATA_ZARR_ZIP: 'obsSpots.spatialdata.zarr.zip',
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+ FEATURE_LABELS_SPATIALDATA_ZARR_ZIP: 'featureLabels.spatialdata.zarr.zip',
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  // MuData
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  OBS_FEATURE_MATRIX_MUDATA_ZARR: 'obsFeatureMatrix.mudata.zarr',
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  OBS_SETS_MUDATA_ZARR: 'obsSets.mudata.zarr',
package/dist-tsc/version.json CHANGED
@@ -1,7 +1,7 @@
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  {
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  "note": "This file is autogenerated by .changeset/post-changelog.mjs.",
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- "version": "3.6.2",
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- "date": "2025-06-03",
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+ "version": "3.6.4",
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+ "date": "2025-07-02",
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  "branch": "changeset-release/main",
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- "hash": "a638552d"
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+ "hash": "69483719"
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  }
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@vitessce/constants-internal",
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- "version": "3.6.2",
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+ "version": "3.6.4",
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  "author": "HIDIVE Lab at HMS",
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  "homepage": "http://vitessce.io",
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  "repository": {
package/src/constant-relationships.ts CHANGED
@@ -220,4 +220,27 @@ export const ALT_ZARR_STORE_TYPES = {
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  [FileType.OBS_SEGMENTATIONS_OME_ZARR]: {
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  zip: FileType.OBS_SEGMENTATIONS_OME_ZARR_ZIP,
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  },
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+
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+ // For SpatialData:
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+ [FileType.IMAGE_SPATIALDATA_ZARR]: {
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+ zip: FileType.IMAGE_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.LABELS_SPATIALDATA_ZARR]: {
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+ zip: FileType.LABELS_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.SHAPES_SPATIALDATA_ZARR]: {
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+ zip: FileType.SHAPES_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR]: {
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+ zip: FileType.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.OBS_SETS_SPATIALDATA_ZARR]: {
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+ zip: FileType.OBS_SETS_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.OBS_SPOTS_SPATIALDATA_ZARR]: {
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+ zip: FileType.OBS_SPOTS_SPATIALDATA_ZARR_ZIP,
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+ },
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+ [FileType.FEATURE_LABELS_SPATIALDATA_ZARR]: {
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+ zip: FileType.FEATURE_LABELS_SPATIALDATA_ZARR_ZIP,
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+ },
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  };
package/src/constants.ts CHANGED
@@ -77,6 +77,7 @@ export const FileType = {
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  ANNDATA_ZARR_ZIP: 'anndata.zarr.zip',
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  ANNDATA_H5AD: 'anndata.h5ad',
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  SPATIALDATA_ZARR: 'spatialdata.zarr',
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+ SPATIALDATA_ZARR_ZIP: 'spatialdata.zarr.zip',
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  // Atomic file types
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  OBS_EMBEDDING_CSV: 'obsEmbedding.csv',
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  OBS_SPOTS_CSV: 'obsSpots.csv',
@@ -162,6 +163,15 @@ export const FileType = {
162
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  // TODO:
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  // OBS_POINTS_SPATIALDATA_ZARR: 'obsPoints.spatialdata.zarr',
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  // OBS_LOCATIONS_SPATIALDATA_ZARR: 'obsLocations.spatialdata.zarr',
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+
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+ // SpatialData - zipped
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+ IMAGE_SPATIALDATA_ZARR_ZIP: 'image.spatialdata.zarr.zip',
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+ LABELS_SPATIALDATA_ZARR_ZIP: 'labels.spatialdata.zarr.zip',
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+ SHAPES_SPATIALDATA_ZARR_ZIP: 'shapes.spatialdata.zarr.zip',
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+ OBS_FEATURE_MATRIX_SPATIALDATA_ZARR_ZIP: 'obsFeatureMatrix.spatialdata.zarr.zip',
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+ OBS_SETS_SPATIALDATA_ZARR_ZIP: 'obsSets.spatialdata.zarr.zip',
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+ OBS_SPOTS_SPATIALDATA_ZARR_ZIP: 'obsSpots.spatialdata.zarr.zip',
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+ FEATURE_LABELS_SPATIALDATA_ZARR_ZIP: 'featureLabels.spatialdata.zarr.zip',
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  // MuData
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  OBS_FEATURE_MATRIX_MUDATA_ZARR: 'obsFeatureMatrix.mudata.zarr',
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  OBS_SETS_MUDATA_ZARR: 'obsSets.mudata.zarr',
package/src/version.json CHANGED
@@ -1,7 +1,7 @@
1
1
  {
2
2
  "note": "This file is autogenerated by .changeset/post-changelog.mjs.",
3
- "version": "3.6.2",
4
- "date": "2025-06-03",
3
+ "version": "3.6.4",
4
+ "date": "2025-07-02",
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5
  "branch": "changeset-release/main",
6
- "hash": "a638552d"
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+ "hash": "69483719"
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  }