@vitessce/config 3.6.18 → 3.7.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/index.js +7 -10
- package/package.json +6 -6
package/dist/index.js
CHANGED
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@@ -773,12 +773,11 @@ class VitessceConfigDataset {
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}
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function useCoordinationByObjectHelper(scopes, coordinationScopes, coordinationScopesBy) {
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function processLevel(parentType, parentScope, levelType, levelVal) {
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776
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-
var _a, _b;
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if (Array.isArray(levelVal)) {
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coordinationScopesBy[parentType] = {
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...coordinationScopesBy[parentType] || {},
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[levelType]: {
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-
...
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+
...coordinationScopesBy[parentType]?.[levelType] || {},
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[parentScope.cScope]: levelVal.map((childVal) => childVal.scope.cScope)
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}
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};
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@@ -796,7 +795,7 @@ function useCoordinationByObjectHelper(scopes, coordinationScopes, coordinationS
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coordinationScopesBy[parentType] = {
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...coordinationScopesBy[parentType] || {},
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[levelType]: {
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-
...
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+
...coordinationScopesBy[parentType]?.[levelType] || {},
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[parentScope.cScope]: levelVal.scope.cScope
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}
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};
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@@ -1649,7 +1648,6 @@ class AnndataZarrAutoConfig extends AbstractAutoConfig {
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this.metadataSummary = {};
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}
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async composeFileConfig() {
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-
var _a;
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this.metadataSummary = await this.setMetadataSummary();
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const options = {
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obsEmbedding: [],
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@@ -1704,7 +1702,7 @@ class AnndataZarrAutoConfig extends AbstractAutoConfig {
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}
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});
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});
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1707
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-
options.obsSets =
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+
options.obsSets = options.obsSets?.map((obsSet) => {
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if (obsSet.path.length === 1) {
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return {
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...obsSet,
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@@ -2046,10 +2044,9 @@ function getHintOptions(fileUrls) {
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}
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});
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const datasetType = Object.keys(fileTypes).sort().join(",");
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2049
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-
return
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return HINT_TYPE_TO_FILE_TYPE_MAP?.[datasetType] || [];
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}
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async function generateConfig(fileUrls, hintTitle = null) {
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-
var _a;
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const vc = new VitessceConfig({
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schemaVersion: "1.0.15",
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name: "An automatically generated config. Adjust values and add layout components if needed.",
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@@ -2057,17 +2054,17 @@ async function generateConfig(fileUrls, hintTitle = null) {
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});
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const allViews = [];
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const dataset = vc.addDataset("An automatically generated view config for dataset. Adjust values and add layout components if needed.");
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const hintsConfig = !hintTitle ? { views: {} } : HINTS_CONFIG
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const hintsConfig = !hintTitle ? { views: {} } : HINTS_CONFIG?.[hintTitle];
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if (!hintsConfig) {
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throw new Error(`Hints config not found for the supplied hint: ${hintTitle}.`);
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}
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-
const useHints =
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const useHints = Object.keys(hintsConfig?.views)?.length > 0;
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fileUrls.forEach((url) => {
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allViews.push(generateViewDefinition(url, vc, dataset, hintsConfig));
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});
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return Promise.all(allViews).then((views) => {
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const flattenedViews = views.flat();
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-
if (hintsConfig
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if (hintsConfig?.coordinationSpaceRequired) {
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insertCoordinationSpaceForSpatial(flattenedViews, vc);
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}
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if (!useHints) {
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package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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1
1
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{
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"name": "@vitessce/config",
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"version": "3.
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"version": "3.7.1",
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"author": "HIDIVE Lab at HMS",
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"homepage": "http://vitessce.io",
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"repository": {
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@@ -17,13 +17,13 @@
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],
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"dependencies": {
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"zarrita": "0.5.3",
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"@vitessce/constants-internal": "3.
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"@vitessce/utils": "3.
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"@vitessce/globals": "3.
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"@vitessce/zarr-utils": "3.
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"@vitessce/constants-internal": "3.7.1",
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"@vitessce/utils": "3.7.1",
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"@vitessce/globals": "3.7.1",
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"@vitessce/zarr-utils": "3.7.1"
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},
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"scripts": {
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"bundle": "pnpm exec vite build -c ../../scripts/vite.config.
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"bundle": "pnpm exec vite build -c ../../scripts/vite.config.mjs",
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"test": "pnpm exec vitest --run"
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},
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"module": "dist/index.js",
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