@vitessce/config 3.4.6 → 3.4.7
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/dist/index.js
CHANGED
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@@ -169,6 +169,7 @@ const CoordinationType = {
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GATING_FEATURE_SELECTION_X: "gatingFeatureSelectionX",
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GATING_FEATURE_SELECTION_Y: "gatingFeatureSelectionY",
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FEATURE_VALUE_TRANSFORM_COEFFICIENT: "featureValueTransformCoefficient",
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+
FEATURE_VALUE_POSITIVITY_THRESHOLD: "featureValuePositivityThreshold",
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TOOLTIPS_VISIBLE: "tooltipsVisible",
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FILE_UID: "fileUid",
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IMAGE_LAYER: "imageLayer",
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@@ -216,7 +217,14 @@ const CoordinationType = {
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SPATIAL_CHANNEL_LABEL_SIZE: "spatialChannelLabelSize",
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// Multi-sample / comparative
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SAMPLE_TYPE: "sampleType",
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-
SAMPLE_SET_SELECTION: "sampleSetSelection"
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+
SAMPLE_SET_SELECTION: "sampleSetSelection",
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SAMPLE_SET_COLOR: "sampleSetColor",
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EMBEDDING_POINTS_VISIBLE: "embeddingPointsVisible",
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EMBEDDING_CONTOURS_VISIBLE: "embeddingContoursVisible",
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EMBEDDING_CONTOURS_FILLED: "embeddingContoursFilled",
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EMBEDDING_CONTOUR_PERCENTILES: "embeddingContourPercentiles",
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CONTOUR_COLOR_ENCODING: "contourColorEncoding",
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CONTOUR_COLOR: "contourColor"
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};
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var commonjsGlobal = typeof globalThis !== "undefined" ? globalThis : typeof window !== "undefined" ? window : typeof global !== "undefined" ? global : typeof self !== "undefined" ? self : {};
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function getDefaultExportFromCjs(x) {
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@@ -1706,7 +1714,7 @@ class AnndataZarrAutoConfig extends AbstractAutoConfig {
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"/obs/.zattrs",
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"/X/.zarray",
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"/X/data/.zarray"
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-
// for https://
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+
// for https://data-1.vitessce.io/0.0.33/main/human-lymph-node-10x-visium/human_lymph_node_10x_visium.h5ad.zarr
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];
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const getObsmKey = (url) => {
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const obsmKeyStartIndex = `${this.fileUrl}/`.length;
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@@ -138,7 +138,7 @@ class AnndataZarrAutoConfig extends AbstractAutoConfig {
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});
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// if length of path is 1, storing the value as an array doesn't work
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// es-lint-disable-next-line max-len
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-
// Example: https://
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+
// Example: https://data-1.vitessce.io/0.0.33/main/human-lymph-node-10x-visium/human_lymph_node_10x_visium.h5ad.zarr
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options.obsSets = options.obsSets?.map((obsSet) => {
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if (obsSet.path.length === 1) {
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return {
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@@ -228,7 +228,7 @@ class AnndataZarrAutoConfig extends AbstractAutoConfig {
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'/obsm/X_segmentations/.zarray',
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'/obs/.zattrs',
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'/X/.zarray',
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-
'/X/data/.zarray', // for https://
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+
'/X/data/.zarray', // for https://data-1.vitessce.io/0.0.33/main/human-lymph-node-10x-visium/human_lymph_node_10x_visium.h5ad.zarr
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];
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const getObsmKey = (url) => {
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// Get the substring "X_pca" from a URL like
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"VitessceConfig.d.ts","sourceRoot":"","sources":["../src/VitessceConfig.js"],"names":[],"mappings":"AA0XA;;;;;GAKG;AACH,kCAJe,CAAC,kBAAkB,GAAC,yBAAyB,GAAC,yBAAyB,CAAC,
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1
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+
{"version":3,"file":"VitessceConfig.d.ts","sourceRoot":"","sources":["../src/VitessceConfig.js"],"names":[],"mappings":"AA0XA;;;;;GAKG;AACH,kCAJe,CAAC,kBAAkB,GAAC,yBAAyB,GAAC,yBAAyB,CAAC,EAAA,GAE1E,yBAAyB,CAKrC;AAED;;;;;GAKG;AACH,kCAJe,CAAC,kBAAkB,GAAC,yBAAyB,GAAC,yBAAyB,CAAC,EAAA,GAE1E,yBAAyB,CAKrC;AAsBD,kDAEC;AA8kBD;;;;EAiBC;AAjgCD;;GAEG;AACH;IACE;;;;;;;;OAQG;IACH,iBAPW,MAAM,YAEN,MAAM,oCACN,MAAM,GAAC,KAAK,GAAC,IAAI,EAW3B;IANC;;;;;MAKC;IAGH;;OAEG;IACH,UAFa,MAAM,CAIlB;CACF;AAED;;GAEG;AACH;IACE;;;;;OAKG;IACH,iBAJW,MAAM,QACN,MAAM,eACN,MAAM,EAShB;IANC;;;;;MAKC;IAGH;;;;;;;;;;OAUG;IACH,gBARG;QAAiC,GAAG,EAA5B,MAAM,GAAC,SAAS;QACD,QAAQ,EAAvB,MAAM;QACmB,kBAAkB,EAA3C,MAAM,GAAC,SAAS;QACe,OAAO,EAAtC,MAAM,GAAC,KAAK,GAAC,SAAS;KAG9B,mBAAU,qBAAqB,CA6BjC;IAED;;OAEG;IACH,UAFa,MAAM,CAOlB;CACF;AA0ID;;GAEG;AACH;IACE;;;;;;;;;OASG;IACH,uBARW,MAAM,sBACN,MAAM,KAEN,MAAM,KACN,MAAM,KACN,MAAM,KACN,MAAM,EAYhB;IATC;;;;;;;;MAQC;IAGH;;;;;OAKG;IACH,yBAJe,+BAA+B,EAAA,GAEjC,kBAAkB,CAQ9B;IAED;;;;;OAKG;IACH,gCAJW,MAAM,GAEJ,kBAAkB,CAiB9B;IAED;;;;OAIG;IACH,+BAHW,mCAAmC,GACjC,kBAAkB,CAe9B;IAED;;;;;;;QAOI;IACJ,WANY,MAAM,KACN,MAAM,KACN,MAAM,KACN,MAAM,GACJ,kBAAkB,CAS/B;IAED;;;OAGG;IACH,sBAFa,kBAAkB,CAQ9B;IAED;;OAEG;IACH,UAFa,MAAM,CAIlB;CACF;AAED;;GAEG;AACH;IACE,wBAEC;IADC,WAAkB;CAErB;AAED;;GAEG;AACH;IACE,wBAEC;IADC,WAAkB;CAErB;AAgDD;;GAEG;AACH;IACE;;;;;OAKG;IACH,mBAJW,MAAM,UACN,MAAM,WACN,CAAC,GAAG,CAAC,EAMf;IAHC,cAAkB;IAClB,eAAoB;IACpB,cAAoB;IAGtB;;;;OAIG;IACH,iBAHW,GAAG,GACD,+BAA+B,CAK3C;CACF;AAED;;;;GAIG;AACH;IACE;;;;OAIG;IACH,uBAHW,MAAM,eACN,MAAM,EAWhB;IARC,2CAGC;IACD,6CAGC;IAGH;;;;;OAKG;IACH,yBAJe,+BAA+B,EAAA,GAEjC,mCAAmC,CAU/C;IAED;;;;;;OAMG;IACH,gCAJW,MAAM,GAEJ,kBAAkB,CAiB9B;CACF;AAED;;GAEG;AACH;IAscE;;;;;;OAMG;IACH,wBAJW,MAAM,GACJ,cAAc,CAiC1B;IA1eD;;;;;;OAMG;IACH,oBAJG;QAAuB,aAAa,EAA5B,MAAM;QACS,IAAI,EAAnB,MAAM;QACmB,WAAW,EAApC,MAAM,GAAC,SAAS;KAC1B,kBAmCA;IAVC;;;;;;;;MAQC;IACD,kBAAgC;IAGlC;;;;;;;;OAQG;IACH,kBAPW,MAAM,gBACN,MAAM,YAEd;QAAwB,GAAG,EAAnB,MAAM;KAEd,GAAU,qBAAqB,CAWjC;IAED;;;;;;;;;;;;;OAaG;IACH,iBAZW,qBAAqB,aAErB,MAAM,WAEd;QAAwB,CAAC,EAAjB,MAAM;QACU,CAAC,EAAjB,MAAM;QACU,CAAC,EAAjB,MAAM;QACU,CAAC,EAAjB,MAAM;QACU,OAAO,EAAvB,MAAM;KAEd,GAAU,kBAAkB,CAmC9B;IAED;;;;;OAKG;IACH,yBAHc,MAAM,EAAA,GACP,+BAA+B,EAAE,CAmB7C;IAED;;;;OAIG;IACH,uBAFa,mCAAmC,CA4B/C;IAED;;;;;;;;;;;;OAYG;IACH,+BATW,MAAM,GAKJ,MAAM,CAuIlB;IAED;;;;;;;OAOG;IACH,iBANW,kBAAkB,EAAE,UACpB,MAAM,EAAE,YACR,GAAG,EAAE,GAEH,cAAc,CAe1B;IAED;;;;;;;;;;;;;;;OAeG;IACH,yBAbW,kBAAkB,EAAE,SACpB,MAAM,YAKN,MAAM,GAAC,IAAI,GAKT,cAAc,CAyB1B;IAED;;;;;;;;OAQG;IACH,4BALW,MAAM,UACN,MAAM,UACN,GAAG,GACD,+BAA+B,CAS3C;IAED;;;;;OAKG;IACH,mBAJW,kBAAkB,GAAC,yBAAyB,GAAC,yBAAyB,GAEpE,cAAc,CA0B1B;IAED;;;OAGG;IACH,UAFa,MAAM,CAmBlB;CAwCF;AAhmBD;IACE,wBAGC;IAFC,WAAkB;IAClB,iBAAuB;IAGzB,qCAEC;IAED,iBAEC;IAED,oBAEC;CACF"}
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package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@vitessce/config",
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-
"version": "3.4.
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"version": "3.4.7",
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"author": "Gehlenborg Lab",
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"homepage": "http://vitessce.io",
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"repository": {
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@@ -16,8 +16,8 @@
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"dist-tsc"
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],
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"dependencies": {
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"@vitessce/
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"@vitessce/
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"@vitessce/constants-internal": "3.4.7",
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"@vitessce/utils": "3.4.7"
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},
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"scripts": {
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"bundle": "pnpm exec vite build -c ../../scripts/vite.config.js",
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@@ -165,7 +165,7 @@ class AnndataZarrAutoConfig extends AbstractAutoConfig {
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// if length of path is 1, storing the value as an array doesn't work
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// es-lint-disable-next-line max-len
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-
// Example: https://
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// Example: https://data-1.vitessce.io/0.0.33/main/human-lymph-node-10x-visium/human_lymph_node_10x_visium.h5ad.zarr
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options.obsSets = options.obsSets?.map((obsSet) => {
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if (obsSet.path.length === 1) {
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return {
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@@ -270,7 +270,7 @@ class AnndataZarrAutoConfig extends AbstractAutoConfig {
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'/obsm/X_segmentations/.zarray',
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'/obs/.zattrs',
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'/X/.zarray',
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-
'/X/data/.zarray', // for https://
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'/X/data/.zarray', // for https://data-1.vitessce.io/0.0.33/main/human-lymph-node-10x-visium/human_lymph_node_10x_visium.h5ad.zarr
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];
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const getObsmKey = (url) => {
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