@vitessce/config 3.3.6 → 3.3.7

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Files changed (2) hide show
  1. package/dist/index.js +20 -1
  2. package/package.json +3 -3
package/dist/index.js CHANGED
@@ -1,6 +1,7 @@
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  const FileType = {
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  // Joint file types
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  ANNDATA_ZARR: "anndata.zarr",
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+ ANNDATA_ZARR_ZIP: "anndata.zarr.zip",
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  SPATIALDATA_ZARR: "spatialdata.zarr",
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  // Atomic file types
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  OBS_EMBEDDING_CSV: "obsEmbedding.csv",
@@ -13,6 +14,7 @@ const FileType = {
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  OBS_SEGMENTATIONS_JSON: "obsSegmentations.json",
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  OBS_SETS_CSV: "obsSets.csv",
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  OBS_SETS_JSON: "obsSets.json",
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+ SAMPLE_SETS_CSV: "sampleSets.csv",
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  // OME-Zarr
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  IMAGE_OME_ZARR: "image.ome-zarr",
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  OBS_SEGMENTATIONS_OME_ZARR: "obsSegmentations.ome-zarr",
@@ -27,6 +29,19 @@ const FileType = {
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  OBS_SEGMENTATIONS_ANNDATA_ZARR: "obsSegmentations.anndata.zarr",
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  OBS_LABELS_ANNDATA_ZARR: "obsLabels.anndata.zarr",
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  FEATURE_LABELS_ANNDATA_ZARR: "featureLabels.anndata.zarr",
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+ SAMPLE_EDGES_ANNDATA_ZARR: "sampleEdges.anndata.zarr",
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+ // AnnData - zipped
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+ OBS_FEATURE_MATRIX_ANNDATA_ZARR_ZIP: "obsFeatureMatrix.anndata.zarr.zip",
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+ OBS_FEATURE_COLUMNS_ANNDATA_ZARR_ZIP: "obsFeatureColumns.anndata.zarr.zip",
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+ OBS_SETS_ANNDATA_ZARR_ZIP: "obsSets.anndata.zarr.zip",
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+ OBS_EMBEDDING_ANNDATA_ZARR_ZIP: "obsEmbedding.anndata.zarr.zip",
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+ OBS_SPOTS_ANNDATA_ZARR_ZIP: "obsSpots.anndata.zarr.zip",
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+ OBS_POINTS_ANNDATA_ZARR_ZIP: "obsPoints.anndata.zarr.zip",
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+ OBS_LOCATIONS_ANNDATA_ZARR_ZIP: "obsLocations.anndata.zarr.zip",
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+ OBS_SEGMENTATIONS_ANNDATA_ZARR_ZIP: "obsSegmentations.anndata.zarr.zip",
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+ OBS_LABELS_ANNDATA_ZARR_ZIP: "obsLabels.anndata.zarr.zip",
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+ FEATURE_LABELS_ANNDATA_ZARR_ZIP: "featureLabels.anndata.zarr.zip",
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+ SAMPLE_EDGES_ANNDATA_ZARR_ZIP: "sampleEdges.anndata.zarr.zip",
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  // SpatialData
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  IMAGE_SPATIALDATA_ZARR: "image.spatialdata.zarr",
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  LABELS_SPATIALDATA_ZARR: "labels.spatialdata.zarr",
@@ -34,6 +49,7 @@ const FileType = {
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  OBS_FEATURE_MATRIX_SPATIALDATA_ZARR: "obsFeatureMatrix.spatialdata.zarr",
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  OBS_SETS_SPATIALDATA_ZARR: "obsSets.spatialdata.zarr",
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  OBS_SPOTS_SPATIALDATA_ZARR: "obsSpots.spatialdata.zarr",
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+ FEATURE_LABELS_SPATIALDATA_ZARR: "featureLabels.spatialdata.zarr",
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  // TODO:
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  // OBS_POINTS_SPATIALDATA_ZARR: 'obsPoints.spatialdata.zarr',
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  // OBS_LOCATIONS_SPATIALDATA_ZARR: 'obsLocations.spatialdata.zarr',
@@ -190,7 +206,10 @@ const CoordinationType = {
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  LEGEND_VISIBLE: "legendVisible",
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  SPATIAL_CHANNEL_LABELS_VISIBLE: "spatialChannelLabelsVisible",
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  SPATIAL_CHANNEL_LABELS_ORIENTATION: "spatialChannelLabelsOrientation",
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- SPATIAL_CHANNEL_LABEL_SIZE: "spatialChannelLabelSize"
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+ SPATIAL_CHANNEL_LABEL_SIZE: "spatialChannelLabelSize",
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+ // Multi-sample / comparative
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+ SAMPLE_TYPE: "sampleType",
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+ SAMPLE_SET_SELECTION: "sampleSetSelection"
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  };
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  var commonjsGlobal = typeof globalThis !== "undefined" ? globalThis : typeof window !== "undefined" ? window : typeof global !== "undefined" ? global : typeof self !== "undefined" ? self : {};
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  function getDefaultExportFromCjs(x) {
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@vitessce/config",
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- "version": "3.3.6",
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+ "version": "3.3.7",
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  "author": "Gehlenborg Lab",
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  "homepage": "http://vitessce.io",
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  "repository": {
@@ -16,8 +16,8 @@
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  "dist-tsc"
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  ],
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  "dependencies": {
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- "@vitessce/constants-internal": "3.3.6",
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- "@vitessce/utils": "3.3.6"
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+ "@vitessce/utils": "3.3.7",
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+ "@vitessce/constants-internal": "3.3.7"
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  },
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  "scripts": {
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  "bundle": "pnpm exec vite build -c ../../scripts/vite.config.js",