@vitessce/biomarker-select 3.6.17 → 3.7.0

package/dist/index.js

@@ -12,7 +12,7 @@ var __privateMethod = (obj, member, method) => (__accessCheck(obj, member, "acce
 var _focused, _cleanup, _setup, _a, _online, _cleanup2, _setup2, _b, _client, _currentQuery, _currentQueryInitialState, _currentResult, _currentResultState, _currentResultOptions, _currentThenable, _selectError, _selectFn, _selectResult, _lastQueryWithDefinedData, _staleTimeoutId, _refetchIntervalId, _currentRefetchInterval, _trackedProps, _QueryObserver_instances, executeFetch_fn, updateStaleTimeout_fn, computeRefetchInterval_fn, updateRefetchInterval_fn, updateTimers_fn, clearStaleTimeout_fn, clearRefetchInterval_fn, updateQuery_fn, notify_fn, _c, _client2, _result, _queries, _options, _observers, _combinedResult, _lastCombine, _lastResult, _observerMatches, _QueriesObserver_instances, trackResult_fn, combineResult_fn, findMatchingObservers_fn, onUpdate_fn, notify_fn2, _d;
 import * as React from "react";
 import React__default, { useContext, forwardRef as forwardRef$1, useRef, useMemo, createContext, createElement, isValidElement, cloneElement, Children, PureComponent, useEffect, useState, useCallback } from "react";
-import { useLoaders, useCoordination, useViewConfigStoreApi, useViewConfig, useSetViewConfig, useMatchingLoader, useColumnNameMapping, useAsyncFunction, useComparisonMetadata, useReady, TitleInfo } from "@vitessce/vit-s";
+import { useLoaders, useCoordinationScopes, useCoordination, useViewConfigStoreApi, useViewConfig, useSetViewConfig, useMatchingLoader, useColumnNameMapping, useAsyncFunction, useComparisonMetadata, useReady, TitleInfo } from "@vitessce/vit-s";
 import * as ReactDOM from "react-dom";
 import ReactDOM__default from "react-dom";
 const ViewType = {
@@ -62101,11 +62101,12 @@ function ScmdUi(props) {
 }
 function BiomarkerSelectSubscriber(props) {
   const {
-    coordinationScopes,
+    coordinationScopes: coordinationScopesRaw,
     stratificationOptions: stratificationOptionsProp
     // TODO: Remove; Get from comparisonMetadata instead
   } = props;
   const loaders = useLoaders();
+  const coordinationScopes = useCoordinationScopes(coordinationScopesRaw);
   const [{
     dataset,
     obsType,
@@ -62254,8 +62255,9 @@ const useStyles$1 = makeStyles()((theme) => ({
 function ComparativeHeadingSubscriber(props) {
   var _a2, _b2;
   const {
-    coordinationScopes
+    coordinationScopes: coordinationScopesRaw
   } = props;
+  const coordinationScopes = useCoordinationScopes(coordinationScopesRaw);
   const [{
     sampleSetSelection,
     featureSelection
@@ -63019,7 +63021,7 @@ const useStyles = makeStyles()(() => ({
 }));
 function SampleSetPairManagerSubscriber(props) {
   const {
-    coordinationScopes,
+    coordinationScopes: coordinationScopesRaw,
     removeGridComponent,
     theme,
     title = "Sample Sets",
@@ -63028,6 +63030,7 @@ function SampleSetPairManagerSubscriber(props) {
   } = props;
   const { classes: classes2 } = useStyles();
   const loaders = useLoaders();
+  const coordinationScopes = useCoordinationScopes(coordinationScopesRaw);
   const [{
     dataset,
     obsType,

package/dist-tsc/BiomarkerSelectSubscriber.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"BiomarkerSelectSubscriber.d.ts","sourceRoot":"","sources":["../src/BiomarkerSelectSubscriber.js"],"names":[],"mappings":"AAiBA;;;;;GAKG;AACH,iDAHG;IAA+F,qBAAqB,EAA5G;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,kBAAkB,EAAE,MAAM,CAAC;QAAC,UAAU,EAAE,CAAC,MAAM,EAAE,EAAE,MAAM,EAAE,CAAC,CAAA;KAAC,EAAE;CACvF,eA0JF"}
+{"version":3,"file":"BiomarkerSelectSubscriber.d.ts","sourceRoot":"","sources":["../src/BiomarkerSelectSubscriber.js"],"names":[],"mappings":"AAkBA;;;;;GAKG;AACH,iDAHG;IAA+F,qBAAqB,EAA5G;QAAE,IAAI,EAAE,MAAM,CAAC;QAAC,kBAAkB,EAAE,MAAM,CAAC;QAAC,UAAU,EAAE,CAAC,MAAM,EAAE,EAAE,MAAM,EAAE,CAAC,CAAA;KAAC,EAAE;CACvF,eA2JF"}

package/dist-tsc/BiomarkerSelectSubscriber.js

@@ -2,7 +2,7 @@ import { jsx as _jsx, Fragment as _Fragment } from "react/jsx-runtime";
 /* eslint-disable max-len */
 /* eslint-disable no-unused-vars */
 import React, { useState, useCallback, useMemo } from 'react';
-import { useAsyncFunction, useViewConfigStoreApi, useSetViewConfig, useViewConfig, useCoordination, useLoaders, useComparisonMetadata, useMatchingLoader, useColumnNameMapping, } from '@vitessce/vit-s';
+import { useAsyncFunction, useViewConfigStoreApi, useSetViewConfig, useViewConfig, useCoordination, useLoaders, useComparisonMetadata, useMatchingLoader, useColumnNameMapping, useCoordinationScopes, } from '@vitessce/vit-s';
 import { AsyncFunctionType, ViewType, COMPONENT_COORDINATION_TYPES, DataType } from '@vitessce/constants-internal';
 import { ScmdUi } from './scmd-ui.js';
 /**
@@ -12,9 +12,10 @@ import { ScmdUi } from './scmd-ui.js';
  * @returns
  */
 export function BiomarkerSelectSubscriber(props) {
-    const { coordinationScopes, stratificationOptions: stratificationOptionsProp, // TODO: Remove; Get from comparisonMetadata instead
+    const { coordinationScopes: coordinationScopesRaw, stratificationOptions: stratificationOptionsProp, // TODO: Remove; Get from comparisonMetadata instead
      } = props;
     const loaders = useLoaders();
+    const coordinationScopes = useCoordinationScopes(coordinationScopesRaw);
     const [{ dataset, obsType, sampleType, sampleSetSelection, featureSelection, }, { setSampleSetSelection, setFeatureSelection, }] = useCoordination(COMPONENT_COORDINATION_TYPES[ViewType.BIOMARKER_SELECT], coordinationScopes);
     const viewConfigStoreApi = useViewConfigStoreApi();
     const viewConfig = useViewConfig();

package/dist-tsc/ComparativeHeadingSubscriber.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"ComparativeHeadingSubscriber.d.ts","sourceRoot":"","sources":["../src/ComparativeHeadingSubscriber.js"],"names":[],"mappings":"AAsCA,sEA8EC"}
+{"version":3,"file":"ComparativeHeadingSubscriber.d.ts","sourceRoot":"","sources":["../src/ComparativeHeadingSubscriber.js"],"names":[],"mappings":"AAuCA,sEAgFC"}

package/dist-tsc/ComparativeHeadingSubscriber.js

@@ -1,6 +1,6 @@
 import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
 import React, { useCallback } from 'react';
-import { useCoordination, } from '@vitessce/vit-s';
+import { useCoordination, useCoordinationScopes, } from '@vitessce/vit-s';
 import { ViewType, COMPONENT_COORDINATION_TYPES } from '@vitessce/constants-internal';
 import { makeStyles } from '@vitessce/styles';
 const useStyles = makeStyles()(theme => ({
@@ -34,7 +34,8 @@ const useStyles = makeStyles()(theme => ({
     },
 }));
 export function ComparativeHeadingSubscriber(props) {
-    const { coordinationScopes, } = props;
+    const { coordinationScopes: coordinationScopesRaw, } = props;
+    const coordinationScopes = useCoordinationScopes(coordinationScopesRaw);
     const [{ sampleSetSelection, featureSelection, }, { setSampleSetSelection, setFeatureSelection, }] = useCoordination(COMPONENT_COORDINATION_TYPES[ViewType.COMPARATIVE_HEADING], coordinationScopes);
     const { classes } = useStyles();
     const swapSampleSets = useCallback(() => {

package/dist-tsc/SampleSetPairManagerSubscriber.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"SampleSetPairManagerSubscriber.d.ts","sourceRoot":"","sources":["../src/SampleSetPairManagerSubscriber.js"],"names":[],"mappings":"AA6BA,wEA4HC"}
+{"version":3,"file":"SampleSetPairManagerSubscriber.d.ts","sourceRoot":"","sources":["../src/SampleSetPairManagerSubscriber.js"],"names":[],"mappings":"AA8BA,wEA6HC"}

package/dist-tsc/SampleSetPairManagerSubscriber.js

@@ -3,7 +3,7 @@ import React, { useMemo, useCallback } from 'react';
 import { isEqual } from 'lodash-es';
 import clsx from 'clsx';
 import { makeStyles } from '@vitessce/styles';
-import { TitleInfo, useReady, useCoordination, useLoaders, useComparisonMetadata, useMatchingLoader, useColumnNameMapping, } from '@vitessce/vit-s';
+import { TitleInfo, useReady, useCoordination, useLoaders, useComparisonMetadata, useMatchingLoader, useColumnNameMapping, useCoordinationScopes, } from '@vitessce/vit-s';
 import { ViewType, DataType, COMPONENT_COORDINATION_TYPES, ViewHelpMapping } from '@vitessce/constants-internal';
 const useStyles = makeStyles()(() => ({
     selectedPair: {
@@ -19,9 +19,10 @@ const useStyles = makeStyles()(() => ({
     },
 }));
 export function SampleSetPairManagerSubscriber(props) {
-    const { coordinationScopes, removeGridComponent, theme, title = 'Sample Sets', closeButtonVisible, helpText = ViewHelpMapping.SAMPLE_SET_PAIR_MANAGER, } = props;
+    const { coordinationScopes: coordinationScopesRaw, removeGridComponent, theme, title = 'Sample Sets', closeButtonVisible, helpText = ViewHelpMapping.SAMPLE_SET_PAIR_MANAGER, } = props;
     const { classes } = useStyles();
     const loaders = useLoaders();
+    const coordinationScopes = useCoordinationScopes(coordinationScopesRaw);
     // Get "props" from the coordination space.
     const [{ dataset, obsType, sampleType, sampleSetSelection, }, { setSampleSetSelection, }] = useCoordination(COMPONENT_COORDINATION_TYPES[ViewType.SAMPLE_SET_PAIR_MANAGER], coordinationScopes);
     const sampleSetsLoader = useMatchingLoader(loaders, dataset, DataType.SAMPLE_SETS, { sampleType });

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/biomarker-select",
-  "version": "3.6.17",
+  "version": "3.7.0",
   "author": "Gehlenborg Lab",
   "homepage": "http://vitessce.io",
   "repository": {
@@ -21,24 +21,24 @@
     "fuse.js": "^7.0.0",
     "d3-dsv": "^1.1.1",
     "clsx": "^1.1.1",
-    "@vitessce/styles": "3.6.17",
-    "@vitessce/constants-internal": "3.6.17",
-    "@vitessce/vit-s": "3.6.17",
-    "@vitessce/types": "3.6.17"
+    "@vitessce/styles": "3.7.0",
+    "@vitessce/constants-internal": "3.7.0",
+    "@vitessce/vit-s": "3.7.0",
+    "@vitessce/types": "3.7.0"
   },
   "devDependencies": {
     "@testing-library/jest-dom": "^6.6.3",
     "@testing-library/react": "^16.3.0",
     "react": "^18.0.0",
     "react-dom": "^18.0.0",
-    "vite": "^6.3.5",
+    "vite": "^7.0.0",
     "vitest": "^3.1.4"
   },
   "peerDependencies": {
     "react": "^16.8.0 || ^17.0.0 || ^18.0.0 || ^19.0.0"
   },
   "scripts": {
-    "bundle": "pnpm exec vite build -c ../../../scripts/vite.config.js",
+    "bundle": "pnpm exec vite build -c ../../../scripts/vite.config.mjs",
     "test": "pnpm exec vitest --run"
   },
   "module": "dist/index.js",

package/src/BiomarkerSelectSubscriber.js

@@ -11,6 +11,7 @@ import {
   useComparisonMetadata,
   useMatchingLoader,
   useColumnNameMapping,
+  useCoordinationScopes,
 } from '@vitessce/vit-s';
 import { AsyncFunctionType, ViewType, COMPONENT_COORDINATION_TYPES, DataType } from '@vitessce/constants-internal';
 import { ScmdUi } from './scmd-ui.js';
@@ -23,11 +24,12 @@ import { ScmdUi } from './scmd-ui.js';
  */
 export function BiomarkerSelectSubscriber(props) {
   const {
-    coordinationScopes,
+    coordinationScopes: coordinationScopesRaw,
     stratificationOptions: stratificationOptionsProp, // TODO: Remove; Get from comparisonMetadata instead
   } = props;
 
   const loaders = useLoaders();
+  const coordinationScopes = useCoordinationScopes(coordinationScopesRaw);
 
   const [{
     dataset,

package/src/ComparativeHeadingSubscriber.js

@@ -1,6 +1,7 @@
 import React, { useCallback } from 'react';
 import {
   useCoordination,
+  useCoordinationScopes,
 } from '@vitessce/vit-s';
 import { ViewType, COMPONENT_COORDINATION_TYPES } from '@vitessce/constants-internal';
 import { makeStyles } from '@vitessce/styles';
@@ -38,9 +39,11 @@ const useStyles = makeStyles()(theme => ({
 
 export function ComparativeHeadingSubscriber(props) {
   const {
-    coordinationScopes,
+    coordinationScopes: coordinationScopesRaw,
   } = props;
 
+  const coordinationScopes = useCoordinationScopes(coordinationScopesRaw);
+
   const [{
     sampleSetSelection,
     featureSelection,

package/src/SampleSetPairManagerSubscriber.js

@@ -10,6 +10,7 @@ import {
   useComparisonMetadata,
   useMatchingLoader,
   useColumnNameMapping,
+  useCoordinationScopes,
 } from '@vitessce/vit-s';
 import { ViewType, DataType, COMPONENT_COORDINATION_TYPES, ViewHelpMapping } from '@vitessce/constants-internal';
 
@@ -29,7 +30,7 @@ const useStyles = makeStyles()(() => ({
 
 export function SampleSetPairManagerSubscriber(props) {
   const {
-    coordinationScopes,
+    coordinationScopes: coordinationScopesRaw,
     removeGridComponent,
     theme,
     title = 'Sample Sets',
@@ -39,6 +40,7 @@ export function SampleSetPairManagerSubscriber(props) {
 
   const { classes } = useStyles();
   const loaders = useLoaders();
+  const coordinationScopes = useCoordinationScopes(coordinationScopesRaw);
 
   // Get "props" from the coordination space.
   const [{