@vitessce/all 4.0.6 → 4.0.8

package/dist/{GeometryAndMeshXR-C6kmHlO-.js → GeometryAndMeshXR-Caba1QEa.js}

@@ -3,8 +3,7 @@ import { useRef, useEffect, useState } from "react";
 import { useThree, useFrame } from "@react-three/fiber";
 import { Bvh } from "@react-three/drei";
 import { Matrix4, Vector3, Box3, FrontSide } from "three";
-import { g as getXRModule, i as isValidGeometrySize, M as MeasureLine, s as stringifyLineData } from "./index-DG1OhQF2.js";
-const { useXR, useXRInputSourceState } = getXRModule();
+import { g as getXRModule, i as isValidGeometrySize, M as MeasureLine, s as stringifyLineData } from "./index-B8xbImKw.js";
 function getHandJoint(hand, jointName) {
   return hand.get(jointName);
 }
@@ -27,6 +26,7 @@ function isPinching(hand, frame, refSpace, threshold = 0.02) {
   return thumbPos.distanceTo(indexPos) < threshold;
 }
 function GeometryAndMeshXR(props) {
+  const { useXR, useXRInputSourceState } = getXRModule();
   const { segmentationGroup, segmentationSettings, segmentationSceneScale, renderingSettings, materialRef, highlightEntity, setObsHighlight } = props;
   const model = useRef(null);
   const distanceRef = useRef(null);

package/dist/{ReactNeuroglancer-B-IYc5NJ.js → ReactNeuroglancer-Cm_ERWOf.js}

@@ -1,6 +1,6 @@
 import { jsx, jsxs } from "react/jsx-runtime";
 import React__default from "react";
-import { a as getDefaultExportFromCjs, d as requireAssign, f as require_export, h as require_core, j as require_fails, k as require_toObject, m as require_objectKeys, n as require_cof, o as require_wks, p as require_iterators, q as requireWeb_dom_iterable, s as requireEs6_string_iterator, t as require_anObject, v as require_hide, w as require_ctx, x as require_toLength, y as require_global, z as require_objectDp, A as require_descriptors, D as require_isObject, E as require_objectCreate, F as require_iterDefine, G as require_iterStep, H as require_meta, I as require_isArray, J as require_iobject, K as require_setToStringTag, M as require_aFunction, N as requireIterator, O as require_propertyDesc, c as commonjsGlobal, P as requireEs6_symbol, Q as requireDefineProperty, R as require_toIobject, S as require_objectGopd, T as require_html, U as require_domCreate, V as require_library, W as requireSymbol, X as require_objectPie, Y as require_has, Z as require_redefine, _ as require_objectAssign, $ as GREY_HEX, a0 as diffCameraState } from "./index-Bmbsroxo.js";
+import { a as getDefaultExportFromCjs, d as requireAssign, f as require_export, h as require_core, j as require_fails, k as require_toObject, m as require_objectKeys, n as require_cof, o as require_wks, p as require_iterators, q as requireWeb_dom_iterable, s as requireEs6_string_iterator, t as require_anObject, v as require_hide, w as require_ctx, x as require_toLength, y as require_global, z as require_objectDp, A as require_descriptors, D as require_isObject, E as require_objectCreate, F as require_iterDefine, G as require_iterStep, H as require_meta, I as require_isArray, J as require_iobject, K as require_setToStringTag, M as require_aFunction, N as requireIterator, O as require_propertyDesc, c as commonjsGlobal, P as requireEs6_symbol, Q as requireDefineProperty, R as require_toIobject, S as require_objectGopd, T as require_html, U as require_domCreate, V as require_library, W as requireSymbol, X as require_objectPie, Y as require_has, Z as require_redefine, _ as require_objectAssign, $ as GREY_HEX, a0 as diffCameraState } from "./index-CzTdHRMx.js";
 var assignExports = requireAssign();
 const _Object$assign = /* @__PURE__ */ getDefaultExportFromCjs(assignExports);
 var es6_object_keys = {};
@@ -4648,7 +4648,7 @@ const annotationPropertyTypeHandlers = {
   },
   "int8": {
     serializedBytes() {
-      return 2;
+      return 1;
     },
     alignment() {
       return 1;
@@ -12163,17 +12163,21 @@ function updateFixedCurPositionInChunks(tsource, globalPosition, localPosition)
   const curPositionInChunks = tsource.curPositionInChunks, fixedPositionWithinChunk = tsource.fixedPositionWithinChunk;
   const nonDisplayLowerClipBound = tsource.nonDisplayLowerClipBound, nonDisplayUpperClipBound = tsource.nonDisplayUpperClipBound;
   var _tsource$source$spec = tsource.source.spec;
-  const rank = _tsource$source$spec.rank, chunkDataSize = _tsource$source$spec.chunkDataSize;
+  const rank = _tsource$source$spec.rank, chunkDataSize = _tsource$source$spec.chunkDataSize, lowerChunkBound = _tsource$source$spec.lowerChunkBound, upperChunkBound = _tsource$source$spec.upperChunkBound;
   if (!getChunkPositionFromCombinedGlobalLocalPositions(curPositionInChunks, globalPosition, localPosition, tsource.layerRank, tsource.fixedLayerToChunkTransform)) {
     return false;
   }
+  const EPSILON2 = 1e-3;
   for (let chunkDim = 0; chunkDim < rank; ++chunkDim) {
     const x = curPositionInChunks[chunkDim];
-    if (x < nonDisplayLowerClipBound[chunkDim] || x >= nonDisplayUpperClipBound[chunkDim]) {
+    if (x < nonDisplayLowerClipBound[chunkDim] - EPSILON2 || x > nonDisplayUpperClipBound[chunkDim] + EPSILON2) {
       return false;
     }
     const chunkSize = chunkDataSize[chunkDim];
-    const chunk = curPositionInChunks[chunkDim] = Math.floor(x / chunkSize);
+    const chunk = curPositionInChunks[chunkDim] = Math.min(
+      upperChunkBound[chunkDim] - 1,
+      Math.max(lowerChunkBound[chunkDim], Math.floor(x / chunkSize))
+    );
     fixedPositionWithinChunk[chunkDim] = x - chunk * chunkSize;
   }
   return true;

package/dist/{XREnterButton-YHfoEyJU.js → XREnterButton-C7Q7e8rD.js}

@@ -1,6 +1,6 @@
 import { jsx } from "react/jsx-runtime";
 import { useState, useEffect } from "react";
-import { x as xrStore } from "./xrStore-CIMJKmPR.js";
+import { g as getXrStore } from "./xrStore--BrpHLm6.js";
 function XREnterButton() {
   const [supported, setSupported] = useState(false);
   const [entered, setEntered] = useState(false);
@@ -18,7 +18,7 @@ function XREnterButton() {
     };
   }, []);
   useEffect(() => {
-    const unsubscribe = xrStore.subscribe((state) => {
+    const unsubscribe = getXrStore().subscribe((state) => {
       setEntered(state.session != null);
     });
     return unsubscribe;
@@ -27,11 +27,11 @@ function XREnterButton() {
     return null;
   const handleClick = () => {
     if (entered) {
-      const { session } = xrStore.getState();
+      const { session } = getXrStore().getState();
       if (session)
         session.end();
     } else {
-      xrStore.enterAR();
+      getXrStore().enterAR();
     }
   };
   return jsx("button", { type: "button", onClick: handleClick, style: {

package/dist/{XRSceneComponents-TgABwiay.js → XRSceneComponents-Dgayh6-j.js}

@@ -1,12 +1,12 @@
 import { jsxs, Fragment, jsx } from "react/jsx-runtime";
 import { useRef } from "react";
 import { useThree, useFrame } from "@react-three/fiber";
-import { g as getXRModule } from "./index-DG1OhQF2.js";
-const { useXRInputSourceState } = getXRModule();
+import { g as getXRModule } from "./index-B8xbImKw.js";
 function getHandJoint(hand, jointName) {
   return hand.get(jointName);
 }
 function HandBbox() {
+  const { useXRInputSourceState } = getXRModule();
   const rightHand = useXRInputSourceState("hand", "right");
   const leftHand = useXRInputSourceState("hand", "left");
   const rightTipRef = useRef(null);
@@ -39,8 +39,8 @@ function HandBbox() {
   });
   return jsxs(Fragment, { children: [jsxs("mesh", { name: "leftTipBbox", ref: leftTipRef, children: [jsx("boxGeometry", { args: [0.02, 0.02, 0.02] }), jsx("meshStandardMaterial", { color: "blue", transparent: true, opacity: 0 })] }), jsxs("mesh", { name: "rightTipBbox", ref: rightTipRef, children: [jsx("boxGeometry", { args: [0.02, 0.02, 0.02] }), jsx("meshStandardMaterial", { color: "orange", transparent: true, opacity: 0 })] })] });
 }
-const { useXR } = getXRModule();
 function HandDecorate() {
+  const { useXR } = getXRModule();
   const session = useXR((state) => state.session);
   const { scene } = useThree();
   useFrame(() => {

package/dist/XRWrapper-BrRGN2E4.js

@@ -0,0 +1,10 @@
+import { jsx } from "react/jsx-runtime";
+import { g as getXRModule } from "./index-B8xbImKw.js";
+import { g as getXrStore } from "./xrStore--BrpHLm6.js";
+function XRWrapper({ children }) {
+  const { XR } = getXRModule();
+  return jsx(XR, { store: getXrStore(), children });
+}
+export {
+  XRWrapper as default
+};

package/dist/{deflate-B29mmhfD.js → deflate-D1RcEgtg.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-SxljTded.js";
-import { B as BaseDecoder } from "./index-Bmbsroxo.js";
+import { B as BaseDecoder } from "./index-CzTdHRMx.js";
 class DeflateDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return inflate_1(new Uint8Array(buffer)).buffer;

package/dist/{higlass-CfCaZOam.js → higlass-BLYM2C4s.js}

@@ -1,6 +1,6 @@
 import * as React from "react";
 import React__default, { createContext, isValidElement, PureComponent, Component, useMemo, useState, useRef, useEffect, useCallback, memo, useContext, useReducer, useLayoutEffect } from "react";
-import { r as requireObjectAssign, a as getDefaultExportFromCjs$1, c as commonjsGlobal, e as earcut } from "./index-Bmbsroxo.js";
+import { r as requireObjectAssign, a as getDefaultExportFromCjs$1, c as commonjsGlobal, e as earcut } from "./index-CzTdHRMx.js";
 import ReactDOM__default, { unstable_batchedUpdates, createPortal } from "react-dom";
 import { jsx, jsxs } from "react/jsx-runtime";
 function finallyConstructor(callback) {

package/dist/{index-DG1OhQF2.js → index-B8xbImKw.js}

@@ -3,7 +3,7 @@ import React__default, { useRef, useState, useEffect, Suspense, forwardRef } fro
 import { Canvas } from "@react-three/fiber";
 import { Center, Text, Line, Bvh, OrbitControls } from "@react-three/drei";
 import { Matrix3, Matrix4, Vector3, Vector2, UniformsUtils, Data3DTexture, RedFormat, FloatType, LinearFilter, FrontSide, Scene, Group, MeshPhysicalMaterial, MeshBasicMaterial, MeshStandardMaterial, BackSide } from "three";
-import { C as CoordinationType, g as getImageSize } from "./index-Bmbsroxo.js";
+import { C as CoordinationType, g as getImageSize } from "./index-CzTdHRMx.js";
 function MeasureLine({ currentLine, scale }) {
   const textRef = useRef(null);
   return jsxs("group", { children: [jsx(Center, { bottom: true, right: true, position: [currentLine.midPoint.x, currentLine.midPoint.y, currentLine.midPoint.z], rotation: [0, 0, 0], children: jsx(Text, { color: "gray", scale: 0.05, ref: textRef, children: `${(currentLine.startPoint.distanceTo(currentLine.endPoint) * scale).toFixed(2)} µm` }) }), jsx(Line, {
@@ -945,8 +945,8 @@ function GeometryAndMesh(props) {
     setObsHighlight(e.object.name);
   }, onPointerOut: () => setObsHighlight(null) }) })] }) : null, renderingSettings.uniforms && renderingSettings.shader && renderingSettings.meshScale && renderingSettings.geometrySize ? jsx("group", { children: jsxs("mesh", { scale: renderingSettings.meshScale, ref: materialRef, children: [jsx("boxGeometry", { args: renderingSettings.geometrySize }), jsx("shaderMaterial", { customProgramCacheKey: () => "1", side: FrontSide, uniforms: renderingSettings.uniforms, needsUpdate: true, transparent: true, vertexShader: renderingSettings.shader.vertexShader, fragmentShader: renderingSettings.shader.fragmentShader })] }) }) : null] }), jsx("group", { name: "lines", children: lines.map((object) => jsx(MeasureLine, { currentLine: object, scale: 1 }, stringifyLineData(object))) })] });
 }
-const LazyGeometryAndMeshXR = React__default.lazy(() => import("./GeometryAndMeshXR-C6kmHlO-.js").catch(() => ({ default: GeometryAndMesh })));
-const LazyXRSceneComponents = React__default.lazy(() => import("./XRSceneComponents-TgABwiay.js").catch(() => ({ default: () => null })));
+const LazyGeometryAndMeshXR = React__default.lazy(() => import("./GeometryAndMeshXR-Caba1QEa.js").catch(() => ({ default: GeometryAndMesh })));
+const LazyXRSceneComponents = React__default.lazy(() => import("./XRSceneComponents-Dgayh6-j.js").catch(() => ({ default: () => null })));
 function SpatialThree(props) {
   const materialRef = useRef(null);
   const orbitRef = useRef(null);
@@ -1303,13 +1303,13 @@ function getXRModule() {
 }
 const LazyXRWrapper = React__default.lazy(
   // eslint-disable-next-line implicit-arrow-linebreak, function-paren-newline
-  () => import("./XRWrapper-5X3Se-wN.js").catch(() => ({
+  () => import("./XRWrapper-BrRGN2E4.js").catch(() => ({
     default: ({ children }) => children
   }))
 );
 const LazyXREnterButton = React__default.lazy(
   // eslint-disable-next-line implicit-arrow-linebreak, function-paren-newline
-  () => import("./XREnterButton-YHfoEyJU.js").catch(() => ({
+  () => import("./XREnterButton-C7Q7e8rD.js").catch(() => ({
     default: () => null
   }))
 );

package/dist/{index-C8W5iPqT.js → index-Bub8madF.js}

@@ -4,7 +4,7 @@ import { useThree, useFrame, Canvas } from "@react-three/fiber";
 import { OrbitControls } from "@react-three/drei";
 import * as THREE from "three";
 import { Data3DTexture, RedFormat, UnsignedByteType, LinearFilter, RedIntegerFormat, UnsignedIntType, NearestFilter, Vector3, Vector2, Vector4, UniformsUtils } from "three";
-import { l as log, i as isEqual, C as CoordinationType, u as useEventCallback } from "./index-Bmbsroxo.js";
+import { l as log, i as isEqual, C as CoordinationType, u as useEventCallback } from "./index-CzTdHRMx.js";
 const LogLevel = {
   INFO: "info",
   WARN: "warn",