@vitessce/all 3.9.8 → 3.9.9

package/dist/{OrbitControls-BSs_Q5On.js → OrbitControls-22a8bk04.js}

@@ -1,4 +1,4 @@
-import { aG as getDefaultExportFromCjs, aH as Raycaster, W as OrthographicCamera, K as PerspectiveCamera, av as Scene, aI as PCFSoftShadowMap, aJ as VSMShadowMap, aK as PCFShadowMap, aL as BasicShadowMap, aM as NoToneMapping, aN as ACESFilmicToneMapping, e as Vector3, V as Vector2, aO as Clock, aP as WebGLRenderer, aQ as Camera, x as BufferGeometry, r as Material, aR as Layers, a1 as Texture, aC as RGBAFormat, ay as UnsignedByteType, C as Color, aj as _extends, aS as THREE, aT as EventDispatcher, aU as MOUSE, aV as TOUCH, aW as Spherical, Q as Quaternion, an as Ray, ak as Plane } from "./index-gbtRLRj5.js";
+import { aG as getDefaultExportFromCjs, aH as Raycaster, W as OrthographicCamera, K as PerspectiveCamera, av as Scene, aI as PCFSoftShadowMap, aJ as VSMShadowMap, aK as PCFShadowMap, aL as BasicShadowMap, aM as NoToneMapping, aN as ACESFilmicToneMapping, e as Vector3, V as Vector2, aO as Clock, aP as WebGLRenderer, aQ as Camera, x as BufferGeometry, r as Material, aR as Layers, a1 as Texture, aC as RGBAFormat, ay as UnsignedByteType, C as Color, aj as _extends, aS as THREE, aT as EventDispatcher, aU as MOUSE, aV as TOUCH, aW as Spherical, Q as Quaternion, an as Ray, ak as Plane } from "./index-DyvHlPKD.js";
 import * as React from "react";
 import React__default, { useReducer, useRef, useEffect, useLayoutEffect, useDebugValue, useState, useMemo } from "react";
 var constants = { exports: {} };

package/dist/{ReactNeuroglancer-x4EMSEcX.js → ReactNeuroglancer-R9DY-SSe.js}

@@ -1,4 +1,4 @@
-import { aG as getDefaultExportFromCjs, b1 as requireAssign, b2 as require_export, b3 as require_core, b4 as require_fails, b5 as require_toObject, b6 as require_objectKeys, b7 as require_cof, b8 as require_wks, b9 as require_iterators, ba as requireWeb_dom_iterable, bb as requireEs6_string_iterator, bc as require_anObject, bd as require_hide, be as require_ctx, bf as require_toLength, bg as require_global, bh as require_objectDp, bi as require_descriptors, bj as require_isObject, bk as require_objectCreate, bl as require_iterDefine, bm as require_iterStep, bn as require_meta, bo as require_isArray, bp as require_iobject, bq as require_setToStringTag, br as require_aFunction, bs as requireIterator, bt as require_propertyDesc, a_ as commonjsGlobal, bu as requireEs6_symbol, bv as requireDefineProperty, bw as require_toIobject, bx as require_objectGopd, by as require_html, bz as require_domCreate, bA as require_library, bB as requireSymbol, bC as require_objectPie, bD as require_has, bE as require_redefine, bF as require_objectAssign, bG as diffCameraState, ao as jsxRuntimeExports } from "./index-gbtRLRj5.js";
+import { aG as getDefaultExportFromCjs, b1 as requireAssign, b2 as require_export, b3 as require_core, b4 as require_fails, b5 as require_toObject, b6 as require_objectKeys, b7 as require_cof, b8 as require_wks, b9 as require_iterators, ba as requireWeb_dom_iterable, bb as requireEs6_string_iterator, bc as require_anObject, bd as require_hide, be as require_ctx, bf as require_toLength, bg as require_global, bh as require_objectDp, bi as require_descriptors, bj as require_isObject, bk as require_objectCreate, bl as require_iterDefine, bm as require_iterStep, bn as require_meta, bo as require_isArray, bp as require_iobject, bq as require_setToStringTag, br as require_aFunction, bs as requireIterator, bt as require_propertyDesc, a_ as commonjsGlobal, bu as requireEs6_symbol, bv as requireDefineProperty, bw as require_toIobject, bx as require_objectGopd, by as require_html, bz as require_domCreate, bA as require_library, bB as requireSymbol, bC as require_objectPie, bD as require_has, bE as require_redefine, bF as require_objectAssign, bG as diffCameraState, ao as jsxRuntimeExports } from "./index-DyvHlPKD.js";
 import React__default from "react";
 var assignExports = requireAssign();
 const _Object$assign = /* @__PURE__ */ getDefaultExportFromCjs(assignExports);

package/dist/{deflate-CsmxXIPT.js → deflate-LlDFQTvY.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-SxljTded.js";
-import { aX as BaseDecoder } from "./index-gbtRLRj5.js";
+import { aX as BaseDecoder } from "./index-DyvHlPKD.js";
 class DeflateDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return inflate_1(new Uint8Array(buffer)).buffer;

package/dist/{higlass-wSBrpMhX.js → higlass-BsC0wgvT.js}

@@ -1,7 +1,7 @@
 import * as React$7 from "react";
 import React__default, { isValidElement, PureComponent, Component, createElement, createContext, createRef } from "react";
 import ReactDOM__default, { findDOMNode as findDOMNode$1 } from "react-dom";
-import { a_ as commonjsGlobal$1, a$ as requireObjectAssign, aG as getDefaultExportFromCjs$1, b0 as earcut } from "./index-gbtRLRj5.js";
+import { a_ as commonjsGlobal$1, a$ as requireObjectAssign, aG as getDefaultExportFromCjs$1, b0 as earcut } from "./index-DyvHlPKD.js";
 var promise = {};
 var hasRequiredPromise;
 function requirePromise() {

package/dist/{index-BstOXuv0.js → index-CAfSSaWL.js}

@@ -1,7 +1,7 @@
-import { G as Group, M as Matrix4, T as TrianglesDrawMode, a as TriangleFanDrawMode, b as TriangleStripDrawMode, R as REVISION, L as Loader, c as LoaderUtils, F as FileLoader, d as MeshPhysicalMaterial, V as Vector2, C as Color, S as SpotLight, P as PointLight, D as DirectionalLight, e as Vector3, I as InstancedMesh, Q as Quaternion, O as Object3D, f as TextureLoader, g as ImageBitmapLoader, B as BufferAttribute, h as InterleavedBuffer, i as LinearMipmapLinearFilter, N as NearestMipmapLinearFilter, j as LinearMipmapNearestFilter, k as NearestMipmapNearestFilter, l as LinearFilter, m as NearestFilter, n as RepeatWrapping, o as MirroredRepeatWrapping, p as ClampToEdgeWrapping, q as PointsMaterial, r as Material, s as LineBasicMaterial, t as MeshStandardMaterial, u as DoubleSide, v as MeshBasicMaterial, w as PropertyBinding, x as BufferGeometry, y as SkinnedMesh, z as Mesh, A as LineSegments, E as Line$1, H as LineLoop, J as Points, K as PerspectiveCamera, U as MathUtils, W as OrthographicCamera, X as Skeleton, Y as InterpolateDiscrete, Z as InterpolateLinear, _ as AnimationClip, $ as Bone, a0 as InterleavedBufferAttribute, a1 as Texture, a2 as VectorKeyframeTrack, a3 as QuaternionKeyframeTrack, a4 as NumberKeyframeTrack, a5 as FrontSide, a6 as Interpolant, a7 as Box3, a8 as Sphere, a9 as InstancedBufferGeometry, aa as Float32BufferAttribute, ab as InstancedInterleavedBuffer, ac as WireframeGeometry, ad as ShaderMaterial, ae as UniformsUtils, af as UniformsLib, ag as Vector4, ah as Line3, ai as SphereGeometry, aj as _extends, ak as Plane, al as Triangle, am as BackSide, an as Ray$1, ao as jsxRuntimeExports, ap as Matrix3, aq as CoordinationType, ar as Data3DTexture, as as RedFormat, at as FloatType, au as getImageSize, av as Scene } from "./index-gbtRLRj5.js";
+import { G as Group, M as Matrix4, T as TrianglesDrawMode, a as TriangleFanDrawMode, b as TriangleStripDrawMode, R as REVISION, L as Loader, c as LoaderUtils, F as FileLoader, d as MeshPhysicalMaterial, V as Vector2, C as Color, S as SpotLight, P as PointLight, D as DirectionalLight, e as Vector3, I as InstancedMesh, Q as Quaternion, O as Object3D, f as TextureLoader, g as ImageBitmapLoader, B as BufferAttribute, h as InterleavedBuffer, i as LinearMipmapLinearFilter, N as NearestMipmapLinearFilter, j as LinearMipmapNearestFilter, k as NearestMipmapNearestFilter, l as LinearFilter, m as NearestFilter, n as RepeatWrapping, o as MirroredRepeatWrapping, p as ClampToEdgeWrapping, q as PointsMaterial, r as Material, s as LineBasicMaterial, t as MeshStandardMaterial, u as DoubleSide, v as MeshBasicMaterial, w as PropertyBinding, x as BufferGeometry, y as SkinnedMesh, z as Mesh, A as LineSegments, E as Line$1, H as LineLoop, J as Points, K as PerspectiveCamera, U as MathUtils, W as OrthographicCamera, X as Skeleton, Y as InterpolateDiscrete, Z as InterpolateLinear, _ as AnimationClip, $ as Bone, a0 as InterleavedBufferAttribute, a1 as Texture, a2 as VectorKeyframeTrack, a3 as QuaternionKeyframeTrack, a4 as NumberKeyframeTrack, a5 as FrontSide, a6 as Interpolant, a7 as Box3, a8 as Sphere, a9 as InstancedBufferGeometry, aa as Float32BufferAttribute, ab as InstancedInterleavedBuffer, ac as WireframeGeometry, ad as ShaderMaterial, ae as UniformsUtils, af as UniformsLib, ag as Vector4, ah as Line3, ai as SphereGeometry, aj as _extends, ak as Plane, al as Triangle, am as BackSide, an as Ray$1, ao as jsxRuntimeExports, ap as Matrix3, aq as CoordinationType, ar as Data3DTexture, as as RedFormat, at as FloatType, au as getImageSize, av as Scene } from "./index-DyvHlPKD.js";
 import * as React from "react";
 import { useRef, useEffect, useState, forwardRef } from "react";
-import { u as useThree, a as useFrame, c as create, e as extend, b as createPortal, O as OrbitControls, C as Canvas } from "./OrbitControls-BSs_Q5On.js";
+import { u as useThree, a as useFrame, c as create, e as extend, b as createPortal, O as OrbitControls, C as Canvas } from "./OrbitControls-22a8bk04.js";
 const isPromise = (promise) => typeof promise === "object" && typeof promise.then === "function";
 const globalCache = [];
 function shallowEqualArrays(arrA, arrB, equal = (a, b) => a === b) {
@@ -5027,7 +5027,7 @@ const Text = /* @__PURE__ */ React.forwardRef(({
   const {
     Text: TextMeshImpl,
     preloadFont
-  } = suspend(async () => import("./troika-three-text.esm-DK1u2spU.js"), []);
+  } = suspend(async () => import("./troika-three-text.esm-CVOtVmFe.js"), []);
   const invalidate = useThree(({
     invalidate: invalidate2
   }) => invalidate2);

package/dist/{index-BPsHPaJT.js → index-DpX5nUsD.js}

@@ -1,6 +1,6 @@
-import { aw as log, ax as isEqual, ar as Data3DTexture, as as RedFormat, ay as UnsignedByteType, l as LinearFilter, az as RedIntegerFormat, aA as UnsignedIntType, m as NearestFilter, e as Vector3, V as Vector2, ag as Vector4, ae as UniformsUtils, aq as CoordinationType, aB as WebGLMultipleRenderTargets, aC as RGBAFormat, av as Scene, W as OrthographicCamera, ad as ShaderMaterial, z as Mesh, aD as PlaneGeometry, aE as useEventCallback, ao as jsxRuntimeExports, aF as GLSL3, am as BackSide } from "./index-gbtRLRj5.js";
+import { aw as log, ax as isEqual, ar as Data3DTexture, as as RedFormat, ay as UnsignedByteType, l as LinearFilter, az as RedIntegerFormat, aA as UnsignedIntType, m as NearestFilter, e as Vector3, V as Vector2, ag as Vector4, ae as UniformsUtils, aq as CoordinationType, aB as WebGLMultipleRenderTargets, aC as RGBAFormat, av as Scene, W as OrthographicCamera, ad as ShaderMaterial, z as Mesh, aD as PlaneGeometry, aE as useEventCallback, ao as jsxRuntimeExports, aF as GLSL3, am as BackSide } from "./index-DyvHlPKD.js";
 import { useRef, useState, useMemo, useEffect, Suspense } from "react";
-import { u as useThree, a as useFrame, O as OrbitControls, C as Canvas } from "./OrbitControls-BSs_Q5On.js";
+import { u as useThree, a as useFrame, O as OrbitControls, C as Canvas } from "./OrbitControls-22a8bk04.js";
 const LogLevel = {
   INFO: "info",
   WARN: "warn",

package/dist/{index-gbtRLRj5.js → index-DyvHlPKD.js}

@@ -210359,22 +210359,22 @@ async function getDecoder(fileDirectory) {
   const Decoder = await importFn();
   return new Decoder(fileDirectory);
 }
-addDecoder([void 0, 1], () => import("./raw-BDQB9cuz.js").then((m2) => m2.default));
-addDecoder(5, () => import("./lzw-oMC0dlgC.js").then((m2) => m2.default));
+addDecoder([void 0, 1], () => import("./raw-Q9iDQlA8.js").then((m2) => m2.default));
+addDecoder(5, () => import("./lzw-Cbew-c41.js").then((m2) => m2.default));
 addDecoder(6, () => {
   throw new Error("old style JPEG compression is not supported.");
 });
-addDecoder(7, () => import("./jpeg-C7Mxa_R_.js").then((m2) => m2.default));
-addDecoder([8, 32946], () => import("./deflate-CsmxXIPT.js").then((m2) => m2.default));
-addDecoder(32773, () => import("./packbits-C-3XoOot.js").then((m2) => m2.default));
+addDecoder(7, () => import("./jpeg-CIYI21V8.js").then((m2) => m2.default));
+addDecoder([8, 32946], () => import("./deflate-LlDFQTvY.js").then((m2) => m2.default));
+addDecoder(32773, () => import("./packbits-QQ3Kq95W.js").then((m2) => m2.default));
 addDecoder(
   34887,
-  () => import("./lerc-DbIzGgSj.js").then(async (m2) => {
+  () => import("./lerc-BKoJuTs1.js").then(async (m2) => {
     await m2.zstd.init();
     return m2;
   }).then((m2) => m2.default)
 );
-addDecoder(50001, () => import("./webimage-DhNmlhtK.js").then((m2) => m2.default));
+addDecoder(50001, () => import("./webimage-CVAiK7LB.js").then((m2) => m2.default));
 function copyNewSize(array2, width2, height2, samplesPerPixel = 1) {
   return new (Object.getPrototypeOf(array2)).constructor(width2 * height2 * samplesPerPixel);
 }
@@ -254873,12 +254873,12 @@ class ErrorBoundary extends React__default.Component {
   }
 }
 const LazySpatialThree = React__default.lazy(async () => {
-  const { SpatialWrapper: SpatialWrapper2 } = await import("./index-BstOXuv0.js");
+  const { SpatialWrapper: SpatialWrapper2 } = await import("./index-CAfSSaWL.js");
   return { default: SpatialWrapper2 };
 });
 const SpatialThreeAdapter = React__default.forwardRef((props, ref2) => jsxRuntimeExports.jsx("div", { ref: ref2, style: { width: "100%", height: "100%" }, children: jsxRuntimeExports.jsx(ErrorBoundary, { children: jsxRuntimeExports.jsx(Suspense, { fallback: jsxRuntimeExports.jsx("div", { children: "Loading..." }), children: jsxRuntimeExports.jsx(LazySpatialThree, { ...props }) }) }) }));
 const LazySpatialAccelerated = React__default.lazy(async () => {
-  const { SpatialWrapper: SpatialWrapper2 } = await import("./index-BPsHPaJT.js");
+  const { SpatialWrapper: SpatialWrapper2 } = await import("./index-DpX5nUsD.js");
   return { default: SpatialWrapper2 };
 });
 const SpatialAcceleratedAdapter = React__default.forwardRef((props, ref2) => jsxRuntimeExports.jsx("div", { ref: ref2, style: { width: "100%", height: "100%" }, children: jsxRuntimeExports.jsx(ErrorBoundary, { children: jsxRuntimeExports.jsx(Suspense, { fallback: jsxRuntimeExports.jsx("div", { children: "Loading..." }), children: jsxRuntimeExports.jsx(LazySpatialAccelerated, { ...props }) }) }) }));
@@ -264751,7 +264751,7 @@ function PointLayerController(props) {
   const [coloringTabIndex, setColoringTabIndex] = useState(0);
   const { featureIndex } = pointMatrixIndicesData || {};
   const hasSelectedFeatures = Array.isArray(featureSelection) && featureSelection.length > 0;
-  return jsxRuntimeExports.jsxs(Grid$1, { className: lcClasses.layerControllerGrid, children: [jsxRuntimeExports.jsxs(Paper, { elevation: 4, className: lcClasses.layerControllerRoot, children: [jsxRuntimeExports.jsxs(Grid$1, { container: true, direction: "row", justifyContent: "space-between", children: [jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(Button, { onClick: handleVisibleChange, className: menuClasses.imageLayerVisibleButton, "aria-label": "Toggle layer visibility", children: jsxRuntimeExports.jsx(Visibility, {}) }) }), jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(ChannelColorPickerMenu, { theme, color: color2, setColor: setColor2, palette, isStaticColor, isColormap, featureValueColormap, visible }) }), jsxRuntimeExports.jsx(Grid$1, { size: 6, children: jsxRuntimeExports.jsx(Typography, { className: menuClasses.imageLayerName, children: label2 }) }), jsxRuntimeExports.jsx(Grid$1, { size: 2, children: jsxRuntimeExports.jsx(Slider, { value: opacity2, min: 0, max: 1, step: 1e-3, onChange: handleOpacityChange, className: menuClasses.imageLayerOpacitySlider, orientation: "horizontal", "aria-label": `Adjust opacity for layer ${label2}` }) }), jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(PointLayerEllipsisMenu, { featureSelection, obsColorEncoding, setObsColorEncoding, featureValueColormapRange, setFeatureValueColormapRange, tooltipsVisible, setTooltipsVisible, tooltipCrosshairsVisible, setTooltipCrosshairsVisible, legendVisible, setLegendVisible, featureFilterMode, setFeatureFilterMode }) }), jsxRuntimeExports.jsxs(Grid$1, { size: 1, container: true, direction: "row", children: [jsxRuntimeExports.jsx(SvgPoints, { className: classes2.layerTypePointIcon }), null] })] }), loadingDoneFraction < 1 ? jsxRuntimeExports.jsx(Grid$1, { size: 12, container: true, direction: "column", justifyContent: "space-between", className: classes2.pointFeatureControllerGrid, children: jsxRuntimeExports.jsx(LinearProgress, { variant: loadingDoneFraction === 0 ? "indeterminate" : "determinate", value: loadingDoneFraction * 100 }) }) : null, null] }), hasSelectedFeatures ? jsxRuntimeExports.jsxs(jsxRuntimeExports.Fragment, { children: [featureSelection.map((featureName) => jsxRuntimeExports.jsx(LayerPerFeatureController, { theme, featureName, featureColor, setFeatureColor, spatialLayerColor, featureIndex, featureValueColormap, featureSelection, setFeatureSelection, obsColorEncoding, loadingDoneFraction, opacity: opacity2, handleOpacityChange }, featureName)), jsxRuntimeExports.jsx(Grid$1, { className: lcClasses.layerControllerGrid, children: jsxRuntimeExports.jsx(Paper, { elevation: 2, className: lcClasses.layerControllerSubRow, children: jsxRuntimeExports.jsxs(Grid$1, { container: true, direction: "row", justifyContent: "space-between", children: [jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(Button, { onClick: () => setFeatureFilterMode(featureFilterMode === "featureSelection" ? null : "featureSelection"), className: menuClasses.imageLayerVisibleButton, "aria-label": "Toggle visibility of unselected points", children: featureFilterMode === "featureSelection" ? jsxRuntimeExports.jsx(VisibilityOffIcon, {}) : jsxRuntimeExports.jsx(VisibilityIcon, {}) }) }), jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(ChannelColorPickerMenu, { theme, color: getDefaultColor("dark"), setColor: null, isStaticColor: true, isColormap: false, visible: true }) }), jsxRuntimeExports.jsx(Grid$1, { size: 6, children: jsxRuntimeExports.jsx(Typography, { className: menuClasses.imageLayerName, children: "Unselected" }) }), jsxRuntimeExports.jsx(Grid$1, { size: 2, sx: { paddingRight: "12px", overflow: "visible" }, children: jsxRuntimeExports.jsx(Slider, { value: opacity2, min: 0, max: 1, step: 1e-3, onChange: handleOpacityChange, className: menuClasses.imageLayerOpacitySlider, orientation: "horizontal", "aria-label": "Adjust opacity for unselected layer" }) }), jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(SvgPoints, { className: classes2.layerTypePointIcon }) })] }) }) })] }) : null] });
+  return jsxRuntimeExports.jsxs(Grid$1, { className: lcClasses.layerControllerGrid, children: [jsxRuntimeExports.jsxs(Paper, { elevation: 4, className: lcClasses.layerControllerRoot, children: [jsxRuntimeExports.jsxs(Grid$1, { container: true, direction: "row", justifyContent: "space-between", children: [jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(Button, { onClick: handleVisibleChange, className: menuClasses.imageLayerVisibleButton, "aria-label": "Toggle layer visibility", children: jsxRuntimeExports.jsx(Visibility, {}) }) }), jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(ChannelColorPickerMenu, { theme, color: color2, setColor: setColor2, palette, isStaticColor, isColormap, featureValueColormap, visible }) }), jsxRuntimeExports.jsx(Grid$1, { size: 6, children: jsxRuntimeExports.jsx(Typography, { className: menuClasses.imageLayerName, children: label2 }) }), jsxRuntimeExports.jsx(Grid$1, { size: 2, children: jsxRuntimeExports.jsx(Slider, { value: opacity2, min: 0, max: 1, step: 1e-3, onChange: handleOpacityChange, className: menuClasses.imageLayerOpacitySlider, orientation: "horizontal", "aria-label": `Adjust opacity for layer ${label2}` }) }), jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(PointLayerEllipsisMenu, { featureSelection, obsColorEncoding, setObsColorEncoding, featureValueColormapRange, setFeatureValueColormapRange, tooltipsVisible, setTooltipsVisible, tooltipCrosshairsVisible, setTooltipCrosshairsVisible, legendVisible, setLegendVisible, featureFilterMode, setFeatureFilterMode }) }), jsxRuntimeExports.jsxs(Grid$1, { size: 1, container: true, direction: "row", children: [jsxRuntimeExports.jsx(SvgPoints, { className: classes2.layerTypePointIcon }), null] })] }), loadingDoneFraction < 1 ? jsxRuntimeExports.jsx(Grid$1, { size: 12, container: true, direction: "column", justifyContent: "space-between", className: classes2.pointFeatureControllerGrid, children: jsxRuntimeExports.jsx(LinearProgress, { variant: loadingDoneFraction === 0 ? "indeterminate" : "determinate", value: loadingDoneFraction * 100 }) }) : null, null] }), layerPerFeatureForPoints && hasSelectedFeatures ? jsxRuntimeExports.jsxs(jsxRuntimeExports.Fragment, { children: [featureSelection.map((featureName) => jsxRuntimeExports.jsx(LayerPerFeatureController, { theme, featureName, featureColor, setFeatureColor, spatialLayerColor, featureIndex, featureValueColormap, featureSelection, setFeatureSelection, obsColorEncoding, loadingDoneFraction, opacity: opacity2, handleOpacityChange }, featureName)), jsxRuntimeExports.jsx(Grid$1, { className: lcClasses.layerControllerGrid, children: jsxRuntimeExports.jsx(Paper, { elevation: 2, className: lcClasses.layerControllerSubRow, children: jsxRuntimeExports.jsxs(Grid$1, { container: true, direction: "row", justifyContent: "space-between", children: [jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(Button, { onClick: () => setFeatureFilterMode(featureFilterMode === "featureSelection" ? null : "featureSelection"), className: menuClasses.imageLayerVisibleButton, "aria-label": "Toggle visibility of unselected points", children: featureFilterMode === "featureSelection" ? jsxRuntimeExports.jsx(VisibilityOffIcon, {}) : jsxRuntimeExports.jsx(VisibilityIcon, {}) }) }), jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(ChannelColorPickerMenu, { theme, color: getDefaultColor("dark"), setColor: null, isStaticColor: true, isColormap: false, visible: true }) }), jsxRuntimeExports.jsx(Grid$1, { size: 6, children: jsxRuntimeExports.jsx(Typography, { className: menuClasses.imageLayerName, children: "Unselected" }) }), jsxRuntimeExports.jsx(Grid$1, { size: 2, sx: { paddingRight: "12px", overflow: "visible" }, children: jsxRuntimeExports.jsx(Slider, { value: opacity2, min: 0, max: 1, step: 1e-3, onChange: handleOpacityChange, className: menuClasses.imageLayerOpacitySlider, orientation: "horizontal", "aria-label": "Adjust opacity for unselected layer" }) }), jsxRuntimeExports.jsx(Grid$1, { size: 1, children: jsxRuntimeExports.jsx(SvgPoints, { className: classes2.layerTypePointIcon }) })] }) }) })] }) : null] });
 }
 const useStyles$d = makeStyles()(() => ({
   layerTypeSegmentationIcon: {
@@ -268585,7 +268585,7 @@ function HiglassGlobalStyles(props) {
 }
 register({ dataFetcher: ZarrMultivecDataFetcher_default, config: ZarrMultivecDataFetcher_default.config }, { pluginType: "dataFetcher" });
 const LazyHiGlassComponent = React__default.lazy(async () => {
-  const { HiGlassComponent } = await import("./higlass-wSBrpMhX.js");
+  const { HiGlassComponent } = await import("./higlass-BsC0wgvT.js");
   return { default: HiGlassComponent };
 });
 const HG_SIZE = 800;
@@ -271533,7 +271533,7 @@ function NeuroglancerGlobalStyles(props) {
   const { classes: classes2 } = props;
   return jsxRuntimeExports.jsxs(jsxRuntimeExports.Fragment, { children: [jsxRuntimeExports.jsx(GlobalStyles$3, { styles: globalNeuroglancerCss }), jsxRuntimeExports.jsx(ScopedGlobalStyles, { styles: globalNeuroglancerStyles, parentClassName: classes2.neuroglancerWrapper })] });
 }
-const LazyReactNeuroglancer = React__default.lazy(() => import("./ReactNeuroglancer-x4EMSEcX.js"));
+const LazyReactNeuroglancer = React__default.lazy(() => import("./ReactNeuroglancer-R9DY-SSe.js"));
 function createWorker() {
   const worker = new WorkerFactory$1();
   worker.AsyncComputationWorker = WorkerFactory;
@@ -358199,11 +358199,21 @@ class AnnDataSource extends ZarrDataSource {
         categoriesValues = await this.getFlatArrDecompressed(`${prefix2}/${categories}`);
       }
     } else if (encodingType === "categorical") {
-      const { dtype } = await open$1(storeRoot.resolve(`${path2}/categories`), { kind: "array" });
-      if (dtype === "v2:object" || dtype === "|O") {
+      const categoriesZattrs = await this.getJson(`${path2}/categories/.zattrs`);
+      const categoriesEncodingType = categoriesZattrs?.["encoding-type"];
+      if (categoriesEncodingType === "nullable-string-array") {
+        categoriesValues = await this.getFlatArrDecompressed(`${path2}/categories/values`);
+      } else if (categoriesEncodingType === "string-array") {
         categoriesValues = await this.getFlatArrDecompressed(`${path2}/categories`);
+      } else {
+        const { dtype } = await open$1(storeRoot.resolve(`${path2}/categories`), { kind: "array" });
+        if (dtype === "v2:object" || dtype === "|O") {
+          categoriesValues = await this.getFlatArrDecompressed(`${path2}/categories`);
+        }
       }
       codesPath = `${path2}/codes`;
+    } else if (encodingType === "nullable-string-array") {
+      return this.getFlatArrDecompressed(`${path2}/values`);
     } else if (encodingType === "string-array") {
       return this.getFlatArrDecompressed(path2);
     } else {
@@ -360580,7 +360590,7 @@ class SpatialDataObsPointsLoader extends AbstractTwoStepLoader {
     }
     let locations;
     const formatVersion = await this.dataSource.getPointsFormatVersion(path2);
-    if (formatVersion === "0.1") {
+    if (formatVersion === "0.1" || formatVersion === "0.2") {
       locations = await this.dataSource.loadPoints(path2);
     } else {
       throw new UnknownSpatialDataFormatError("Only points format version 0.1 is supported.");
@@ -360599,7 +360609,7 @@ class SpatialDataObsPointsLoader extends AbstractTwoStepLoader {
     }
     let locationsFeatureIndex;
     const formatVersion = await this.dataSource.getPointsFormatVersion(path2);
-    if (formatVersion === "0.1") {
+    if (formatVersion === "0.1" || formatVersion === "0.2") {
       locationsFeatureIndex = await this.dataSource.loadPointsFeatureIds(path2);
     } else {
       throw new UnknownSpatialDataFormatError("Only points format version 0.1 is supported.");
@@ -360611,7 +360621,7 @@ class SpatialDataObsPointsLoader extends AbstractTwoStepLoader {
     const { path: path2, featureIndexColumn, mortonCodeColumn } = this.options;
     let locations;
     const formatVersion = await this.dataSource.getPointsFormatVersion(path2);
-    if (formatVersion === "0.1") {
+    if (formatVersion === "0.1" || formatVersion === "0.2") {
       locations = await this.dataSource.loadPointsInRect(path2, bounds2, signal, featureIndexColumn, mortonCodeColumn);
     } else {
       throw new UnknownSpatialDataFormatError("Only points format version 0.1 is supported.");
@@ -360643,7 +360653,7 @@ class SpatialDataObsPointsLoader extends AbstractTwoStepLoader {
       // and for the presence of morton_code_2d and feature_index columns.
       this.dataSource.supportsLoadPointsInRect(path2, featureIndexColumnName, mortonCodeColumn)
     ]);
-    const isSupportedVersion = formatVersion === "0.1";
+    const isSupportedVersion = formatVersion === "0.1" || formatVersion === "0.2";
     const boundingBox = zattrs?.bounding_box;
     const hasBoundingBox2D = typeof boundingBox?.x_max === "number" && typeof boundingBox?.x_min === "number" && typeof boundingBox?.y_max === "number" && typeof boundingBox?.y_min === "number";
     return isSupportedVersion && hasBoundingBox2D && hasRequiredColumnsAndRowGroupSize;
@@ -370271,7 +370281,7 @@ async function _loadParquetSchemaBytes({ queryClient, store }, parquetPath, part
       if (!tailBytes || tailBytes.length < TAIL_LENGTH) {
         throw new Error(`Failed to load parquet footerLength for ${partZeroPath}`);
       }
-      const footerLength = new DataView(tailBytes.buffer).getInt32(0, true);
+      const footerLength = new DataView(tailBytes.buffer, tailBytes.byteOffset, tailBytes.byteLength).getInt32(0, true);
       const magic = new TextDecoder().decode(tailBytes.slice(4, 8));
       if (magic !== "PAR1") {
         throw new Error("Invalid Parquet file: missing PAR1 magic number");
@@ -377047,7 +377057,7 @@ class SpatialDataPointsSource extends SpatialDataTableSource {
     const zattrs = await this.loadSpatialDataElementAttrs(path2);
     const formatVersion = zattrs.spatialdata_attrs.version;
     const encodingType = zattrs["encoding-type"];
-    if (encodingType === "ngff:points" && !(formatVersion === "0.1")) {
+    if (encodingType === "ngff:points" && !(formatVersion === "0.1" || formatVersion === "0.2")) {
       throw new Error(`Unexpected version for points spatialdata_attrs: ${formatVersion}`);
     }
     return formatVersion;

package/dist/index.js

@@ -1,4 +1,4 @@
-import { bR, bP, bN, bQ, bO, bM, bS } from "./index-gbtRLRj5.js";
+import { bR, bP, bN, bQ, bO, bM, bS } from "./index-DyvHlPKD.js";
 import { useComplexCoordination, useComplexCoordinationSecondary, useCoordination, useCoordinationScopes, useCoordinationScopesBy, useGridItemSize, useMultiCoordinationScopesNonNull, useMultiCoordinationScopesSecondaryNonNull, usePageModeView } from "@vitessce/vit-s";
 export {
   bR as PluginAsyncFunction,

package/dist/{jpeg-C7Mxa_R_.js → jpeg-CIYI21V8.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-gbtRLRj5.js";
+import { aX as BaseDecoder } from "./index-DyvHlPKD.js";
 const dctZigZag = new Int32Array([
   0,
   1,

package/dist/{lerc-DbIzGgSj.js → lerc-BKoJuTs1.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-SxljTded.js";
-import { aG as getDefaultExportFromCjs, aX as BaseDecoder, aY as LercParameters, aZ as LercAddCompression } from "./index-gbtRLRj5.js";
+import { aG as getDefaultExportFromCjs, aX as BaseDecoder, aY as LercParameters, aZ as LercAddCompression } from "./index-DyvHlPKD.js";
 var LercDecode = { exports: {} };
 var hasRequiredLercDecode;
 function requireLercDecode() {

package/dist/{lzw-oMC0dlgC.js → lzw-Cbew-c41.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-gbtRLRj5.js";
+import { aX as BaseDecoder } from "./index-DyvHlPKD.js";
 const MIN_BITS = 9;
 const CLEAR_CODE = 256;
 const EOI_CODE = 257;

package/dist/{packbits-C-3XoOot.js → packbits-QQ3Kq95W.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-gbtRLRj5.js";
+import { aX as BaseDecoder } from "./index-DyvHlPKD.js";
 class PackbitsDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     const dataView = new DataView(buffer);

package/dist/{raw-BDQB9cuz.js → raw-Q9iDQlA8.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-gbtRLRj5.js";
+import { aX as BaseDecoder } from "./index-DyvHlPKD.js";
 class RawDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return buffer;

package/dist/{troika-three-text.esm-DK1u2spU.js → troika-three-text.esm-CVOtVmFe.js}

@@ -1,4 +1,4 @@
-import { bH as MeshDistanceMaterial, bI as MeshDepthMaterial, bJ as RGBADepthPacking, ae as UniformsUtils, bK as ShaderChunk, a9 as InstancedBufferGeometry, a8 as Sphere, a7 as Box3, am as BackSide, u as DoubleSide, z as Mesh, a5 as FrontSide, v as MeshBasicMaterial, C as Color, e as Vector3, M as Matrix4, V as Vector2, ap as Matrix3, ag as Vector4, a1 as Texture, l as LinearFilter, aD as PlaneGeometry, x as BufferGeometry, aa as Float32BufferAttribute, bL as InstancedBufferAttribute } from "./index-gbtRLRj5.js";
+import { bH as MeshDistanceMaterial, bI as MeshDepthMaterial, bJ as RGBADepthPacking, ae as UniformsUtils, bK as ShaderChunk, a9 as InstancedBufferGeometry, a8 as Sphere, a7 as Box3, am as BackSide, u as DoubleSide, z as Mesh, a5 as FrontSide, v as MeshBasicMaterial, C as Color, e as Vector3, M as Matrix4, V as Vector2, ap as Matrix3, ag as Vector4, a1 as Texture, l as LinearFilter, aD as PlaneGeometry, x as BufferGeometry, aa as Float32BufferAttribute, bL as InstancedBufferAttribute } from "./index-DyvHlPKD.js";
 function workerBootstrap() {
   var modules = /* @__PURE__ */ Object.create(null);
   function registerModule(ref, callback) {

package/dist/{webimage-DhNmlhtK.js → webimage-CVAiK7LB.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-gbtRLRj5.js";
+import { aX as BaseDecoder } from "./index-DyvHlPKD.js";
 class WebImageDecoder extends BaseDecoder {
   constructor() {
     super();

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/all",
-  "version": "3.9.8",
+  "version": "3.9.9",
   "author": "HIDIVE Lab at HMS",
   "homepage": "http://vitessce.io",
   "repository": {
@@ -17,38 +17,38 @@
   ],
   "dependencies": {
     "zod": "^3.21.4",
-    "@vitessce/styles": "3.9.8",
-    "@vitessce/error": "3.9.8",
-    "@vitessce/constants-internal": "3.9.8",
-    "@vitessce/csv": "3.9.8",
-    "@vitessce/description": "3.9.8",
-    "@vitessce/abstract": "3.9.8",
-    "@vitessce/feature-list": "3.9.8",
-    "@vitessce/genomic-profiles": "3.9.8",
-    "@vitessce/heatmap": "3.9.8",
-    "@vitessce/glb": "3.9.8",
-    "@vitessce/json": "3.9.8",
-    "@vitessce/layer-controller": "3.9.8",
-    "@vitessce/layer-controller-beta": "3.9.8",
-    "@vitessce/link-controller": "3.9.8",
-    "@vitessce/obs-sets-manager": "3.9.8",
-    "@vitessce/ome-tiff": "3.9.8",
-    "@vitessce/plugins": "3.9.8",
-    "@vitessce/scatterplot-embedding": "3.9.8",
-    "@vitessce/scatterplot-gating": "3.9.8",
-    "@vitessce/schemas": "3.9.8",
-    "@vitessce/spatial": "3.9.8",
-    "@vitessce/status": "3.9.8",
-    "@vitessce/vit-s": "3.9.8",
-    "@vitessce/spatial-beta": "3.9.8",
-    "@vitessce/zarr": "3.9.8",
-    "@vitessce/statistical-plots": "3.9.8",
-    "@vitessce/globals": "3.9.8",
-    "@vitessce/spatial-zarr": "3.9.8",
-    "@vitessce/spatial-three": "3.9.8",
-    "@vitessce/spatial-accelerated": "3.9.8",
-    "@vitessce/neuroglancer": "3.9.8",
-    "@vitessce/biomarker-select": "3.9.8"
+    "@vitessce/styles": "3.9.9",
+    "@vitessce/constants-internal": "3.9.9",
+    "@vitessce/abstract": "3.9.9",
+    "@vitessce/error": "3.9.9",
+    "@vitessce/description": "3.9.9",
+    "@vitessce/genomic-profiles": "3.9.9",
+    "@vitessce/feature-list": "3.9.9",
+    "@vitessce/heatmap": "3.9.9",
+    "@vitessce/glb": "3.9.9",
+    "@vitessce/json": "3.9.9",
+    "@vitessce/layer-controller": "3.9.9",
+    "@vitessce/link-controller": "3.9.9",
+    "@vitessce/csv": "3.9.9",
+    "@vitessce/obs-sets-manager": "3.9.9",
+    "@vitessce/ome-tiff": "3.9.9",
+    "@vitessce/layer-controller-beta": "3.9.9",
+    "@vitessce/plugins": "3.9.9",
+    "@vitessce/scatterplot-embedding": "3.9.9",
+    "@vitessce/spatial-beta": "3.9.9",
+    "@vitessce/schemas": "3.9.9",
+    "@vitessce/spatial": "3.9.9",
+    "@vitessce/statistical-plots": "3.9.9",
+    "@vitessce/status": "3.9.9",
+    "@vitessce/vit-s": "3.9.9",
+    "@vitessce/zarr": "3.9.9",
+    "@vitessce/scatterplot-gating": "3.9.9",
+    "@vitessce/globals": "3.9.9",
+    "@vitessce/spatial-three": "3.9.9",
+    "@vitessce/spatial-zarr": "3.9.9",
+    "@vitessce/spatial-accelerated": "3.9.9",
+    "@vitessce/biomarker-select": "3.9.9",
+    "@vitessce/neuroglancer": "3.9.9"
   },
   "devDependencies": {
     "@types/react": "^18.0.28",