@vitessce/all 3.9.5 → 4.0.0-test.0

package/dist/index.js

@@ -1,12 +1,12 @@
-import { bR, bP, bN, bQ, bO, bM, bS } from "./index-CJ0WrLWz.js";
+import { a5, a3, a1, a4, a2, a0, a6 } from "./index-5W6nu-ix.js";
 import { useComplexCoordination, useComplexCoordinationSecondary, useCoordination, useCoordinationScopes, useCoordinationScopesBy, useGridItemSize, useMultiCoordinationScopesNonNull, useMultiCoordinationScopesSecondaryNonNull, usePageModeView } from "@vitessce/vit-s";
 export {
-  bR as PluginAsyncFunction,
-  bP as PluginCoordinationType,
-  bN as PluginFileType,
-  bQ as PluginJointFileType,
-  bO as PluginViewType,
-  bM as Vitessce,
+  a5 as PluginAsyncFunction,
+  a3 as PluginCoordinationType,
+  a1 as PluginFileType,
+  a4 as PluginJointFileType,
+  a2 as PluginViewType,
+  a0 as Vitessce,
   useComplexCoordination,
   useComplexCoordinationSecondary,
   useCoordination,
@@ -16,5 +16,5 @@ export {
   useMultiCoordinationScopesNonNull,
   useMultiCoordinationScopesSecondaryNonNull,
   usePageModeView,
-  bS as z
+  a6 as z
 };

package/dist/{jpeg-BpDeSW3W.js → jpeg-fpomMAyh.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-CJ0WrLWz.js";
+import { B as BaseDecoder } from "./index-5W6nu-ix.js";
 const dctZigZag = new Int32Array([
   0,
   1,

package/dist/{lerc-ed9YjGeI.js → lerc-5t7sN-sd.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-SxljTded.js";
-import { aG as getDefaultExportFromCjs, aX as BaseDecoder, aY as LercParameters, aZ as LercAddCompression } from "./index-CJ0WrLWz.js";
+import { a as getDefaultExportFromCjs, B as BaseDecoder, L as LercParameters, b as LercAddCompression } from "./index-5W6nu-ix.js";
 var LercDecode = { exports: {} };
 var hasRequiredLercDecode;
 function requireLercDecode() {

package/dist/{lzw-7E8bYZIo.js → lzw-CC_Aw25a.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-CJ0WrLWz.js";
+import { B as BaseDecoder } from "./index-5W6nu-ix.js";
 const MIN_BITS = 9;
 const CLEAR_CODE = 256;
 const EOI_CODE = 257;

package/dist/{packbits-COn2hgkH.js → packbits-VBSAsHuN.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-CJ0WrLWz.js";
+import { B as BaseDecoder } from "./index-5W6nu-ix.js";
 class PackbitsDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     const dataView = new DataView(buffer);

package/dist/{raw-C5vEl2Zl.js → raw-DK74vK-V.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-CJ0WrLWz.js";
+import { B as BaseDecoder } from "./index-5W6nu-ix.js";
 class RawDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return buffer;

package/dist/{webimage-f_OnujWl.js → webimage-BdYU0dUW.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-CJ0WrLWz.js";
+import { B as BaseDecoder } from "./index-5W6nu-ix.js";
 class WebImageDecoder extends BaseDecoder {
   constructor() {
     super();

package/dist/xrStore-BymedRtx.js

@@ -0,0 +1,8 @@
+import { createXRStore } from "@react-three/xr";
+const xrStore = createXRStore({
+  handTracking: true,
+  emulate: false
+});
+export {
+  xrStore as x
+};

package/dist-tsc/base-plugins.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"base-plugins.d.ts","sourceRoot":"","sources":["../src/base-plugins.ts"],"names":[],"mappings":"AAWA,OAAO,EACL,cAAc,EACd,mBAAmB,EACnB,cAAc,EACd,sBAAsB,EACtB,mBAAmB,EACpB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,UAAU,EACV,UAAU,EACX,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EACL,CAAC,EAqDF,MAAM,mBAAmB,CAAC;AAoL3B,eAAO,MAAM,aAAa,kBA+BzB,CAAC;AAEF,eAAO,MAAM,aAAa,wDA2EzB,CAAC;AAEF,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;yBA6GhB,CAAC;gCAAuD,CAAA;;;yBAE/C,CAAC;gCAGf,CAAC;;;;;;;;;;;;;;;;iBAqBmC,CAAC;;;;iBACsC,CAAC;;;;;;;YAQhF,CAAH;;;YAEO,CAAC;;;;;;;YAQmB,CAAC;;;YAAmE,CAAC;;;;;;;YAM7B,CAAC;;;YAAmE,CAAC;;;;;;;;;;;;;;YAiBpI,CAAC;;;YAIJ,CAAC;;;;;;;;YAUqB,CAAC;;;;YAKvB,CAAC;;;;;;;;;;;;;;;;;;;;;;;;yBAUO,CAAC;gCAAsD,CAAC;;;;;;;;iBAGrC,CAAC;;;;YACG,CAAC;;;;YACD,CAAC;;;;YACA,CAAC;;;;;;;YACuD,CAAC;;;;YAEzF,CAAC;;;;;;;;;;;;;;;;;;;;yBAIG,CAAC;gCAAsD,CAAC;;;;;;;;iBAEmB,CAAC;;;;YACK,CAAC;;;;YACxB,CAAC;;;;YAC/B,CAAC;;;;;;;YAE9B,CAAC;;;;YACe,CAAC;;;;;;;;;;;wBA0DsnE,CAAC;;;wBAA6E,CAAC;;;;;;;;iBAAwR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;;;iBAA+X,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;;;;;;;;yBAAkZ,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;yBAA8E,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;;;;;iBAAgR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;;;;;qBAAygB,CAAC;;;;qBAA2J,CAAC;;;;;;qBAAsN,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;qBAA0K,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;;;YAAoP,CAAC;;;YAAmE,CAAC;;;;;;;;YAAuR,CAAC;;;;YAAkG,CAAC;;;;;;;;;;;;;;;;;;;;;;wBAAmoB,CAAC;;;;iBAAyG,CAAC;wBAA8C,CAAC;;;;iBAAkG,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;;yBAAiH,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;iBAAiG,CAAC;wBAA8C,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;YAAgG,CAAC;;;;YAAmG,CAAC;;;;;;;;;;;;wBAA6R,CAAC;;;;iBAAyG,CAAC;wBAA8C,CAAC;;;;iBAAkG,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;;yBAAiH,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;iBAAiG,CAAC;wBAA8C,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;YAAgG,CAAC;;;;YAAmG,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;sBApjB11T,CAAC;;;;;qBAGkB,CAAC;qBAA4C,CAAC;;;;;;;;;qBAI/B,CAAC;6BAAoD,CAAC;;sBAClC,CAAC;;;;;qBAQzC,CAAC;qBAEZ,CAAC;;;;;;;;;qBAWD,CAAC;6BAEK,CAAC;;;;;;;;;;;;;kBAuBH,CAAA;mBAGE,CAAC;gBACkB,CAAC;gBAEzB,CAAC;uBAEH,CAAF;iBACU,CAAC;oBACS,CAAC;oBAER,CAAC;qBAEZ,CAAF;;kBAC0B,CAAC;mBAEvB,CAAC;gBACmB,CAAC;gBAGlB,CAAC;uBAEe,CAAC;iBACC,CAAC;oBAIrB,CAAA;oBAEgB,CAAC;qBAET,CAAC;;;;;;gBAMZ,CAAD;sBAA0B,CAAC;;;;;qBAOR,CAAC;qBAGjB,CAAC;;;;;;;;;qBAaoB,CAAC;6BAEZ,CAAC;;mBAGb,CAAC;kBACD,CAAC;mBACuB,CAAC;gBAGhB,CAAC;gBACa,CAAC;uBAGxB,CAAA;iBACa,CAAC;oBAEd,CAAF;oBAEE,CAAA;qBACa,CAAC;;;;;;gBAMW,CAAA;sBAG3B,CADC;;;;;qBAE2F,CAAC;qBAG1D,CAAC;;;;;;;;;qBAEpC,CAAC;6BACkD,CAAC;;mBACpB,CAAC;kBAAsB,CAAC;mBAChB,CAAC;gBAAmD,CAAC;gBAAsC,CAAC;uBAA6C,CAAC;iBACjJ,CAAC;oBAE9B,CAAD;oBAA0C,CAAC;qBAC5C,CAAA;;;;;;;;;gBAIkC,CAAC;sBAA0B,CAAC;;;;;qBAK9D,CAAA;qBAIK,CAAC;;;;;;;;;qBAGqD,CAAC;6BAC3B,CAAC;;mBACa,CAAC;kBAC/B,CAAC;mBAClB,CAAF;gBAAmD,CAAC;gBACd,CAAA;uBACjB,CAAC;iBAAuC,CAAC;oBAC5B,CAAC;oBAA0C,CAAC;qBACpC,CAAC;;;;;;;;;;;gBAIrB,CAAC;sBAA0B,CAAC;;;;;qBAItC,CAAC;qBAA4C,CAAC;;;;;;;;;qBAIvC,CAAC;6BAChB,CAAC;;mBACC,CAAC;kBAAsB,CAAC;mBACZ,CAAC;gBAAmD,CAAC;gBACtC,CAAC;uBAA6C,CAAC;iBAC3C,CAAC;oBAA0C,CAAC;oBAClD,CAAC;qBAA2C,CAAC;;;;;;;;;;;;;;OAkG3E,CAAC;AAIF,eAAO,MAAM,qBAAqB;;;;;;;;aAhXtB,CAAC;cAGX,CAAD;eAES,CAAC;;;aAIH,CAAC;cAEP,CAAF;eACgB,CAAC;;;;;;;;;;;;;;;;;;;aAgCd,CAAC;cACQ,CAAC;eACW,CAAC;;;;;;;;;;;;;;;;;;;aAqBE,CAAC;cAC1B,CAAC;eAAuC,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;aApE/B,CAAC;cAGX,CAAD;eAES,CAAC;;;aAIH,CAAC;cAEP,CAAF;eACgB,CAAC;;;;;;;;;;;;;;;;;;;aAgCd,CAAC;cACQ,CAAC;eACW,CAAC;;;;;;;;;;;;;;;;;;;aAqBE,CAAC;cAC1B,CAAC;eAAuC,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;kzBA2iB1C,CAAC;AAEF,eAAO,MAAM,kBAAkB,uBAK9B,CAAC"}
+{"version":3,"file":"base-plugins.d.ts","sourceRoot":"","sources":["../src/base-plugins.ts"],"names":[],"mappings":"AAWA,OAAO,EACL,cAAc,EACd,mBAAmB,EACnB,cAAc,EACd,sBAAsB,EACtB,mBAAmB,EACpB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,UAAU,EACV,UAAU,EACX,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EACL,CAAC,EAsDF,MAAM,mBAAmB,CAAC;AAqL3B,eAAO,MAAM,aAAa,kBA+BzB,CAAC;AAEF,eAAO,MAAM,aAAa,wDA6EzB,CAAC;AAEF,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;yBA2FoC,CAAA;gCAC9C,CAAC;;;yBAGF,CAAC;gCAEa,CAAC;;;;;;;;;;;;;;;;iBAapB,CAAC;;;;iBAMP,CAAC;;;;;;;YAWW,CAAC;;;YAGX,CAAC;;;;;;;YAKsD,CAAC;;;YAClC,CAAC;;;;;;;YAMkB,CAAC;;;YAEtC,CAAC;;;;;;;;;;;;;;YAWI,CAAC;;;YAGd,CAAC;;;;;;;;YAMA,CAAC;;;;YAGkB,CAAC;;;;;;;;;;;;;;;;;;;;;;;;yBAyBxB,CAAC;gCAED,CAAH;;;;;;;;iBAQG,CAAC;;;;YACgB,CAAC;;;;YACI,CAAC;;;;YACO,CAAC;;;;;;;YAEhC,CAAC;;;;YACa,CAAC;;;;;;;;;;;;;;;;;;;;yBAIiE,CAAC;gCACvD,CAAC;;;;;;;;iBAE8C,CAAC;;;;YACK,CAAC;;;;YACQ,CAAC;;;;YAClC,CAAC;;;;;;;YACoC,CAAC;;;;YACzB,CAAC;;;;;;;;;;;wBAiEo7C,CAAC;;;wBAA6E,CAAC;;;;;;;;iBAAwR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;;;iBAA+X,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;;;;;;;;yBAAkZ,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;yBAA8E,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;;;;;iBAAgR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;;;;;qBAAygB,CAAC;;;;qBAA2J,CAAC;;;;;;qBAAsN,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;qBAA0K,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;;;YAAoP,CAAC;;;YAAmE,CAAC;;;;;;;;YAAuR,CAAC;;;;YAAkG,CAAC;;;;;;;;;;;;;;;;;;;;;;wBAAmoB,CAAC;;;;iBAAyG,CAAC;wBAA8C,CAAC;;;;iBAAkG,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;;yBAAiH,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;iBAAiG,CAAC;wBAA8C,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;YAAgG,CAAC;;;;YAAmG,CAAC;;;;;;;;;;;;wBAA6R,CAAC;;;;iBAAyG,CAAC;wBAA8C,CAAC;;;;iBAAkG,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;;yBAAiH,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;iBAAiG,CAAC;wBAA8C,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;YAAgG,CAAC;;;;YAAmG,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;sBAxjB3rS,CAAC;;;;;qBAG2B,CAAC;qBACpB,CAAC;;;;;;;;;qBAGsB,CAAC;6BACD,CAAC;;sBAClC,CAAC;;;;;qBAMQ,CAAC;qBAEL,CAAC;;;;;;;;;qBAWX,CAAC;6BAEM,CAAC;;;;;;;;;;;;;kBAuBQ,CAAC;mBAEjB,CAAA;gBAGY,CAAC;gBACK,CAAC;uBAElB,CAAC;iBACc,CAAC;oBAEb,CAAC;oBACS,CAAC;qBAEP,CAAC;;kBAEL,CAAC;mBACc,CAAC;gBAEb,CAAC;gBACM,CAAC;uBAIpB,CAAF;iBACqB,CAAC;oBACI,CAAC;oBAItB,CAAC;qBAEiB,CAAC;;;;;;gBAMV,CAAC;sBACD,CAAC;;;;;qBAOV,CAAC;qBAEJ,CAAD;;;;;;;;;qBAagB,CAAC;6BAGN,CAAC;;mBAEA,CAAC;kBACZ,CAAC;mBAED,CAAA;gBAEU,CAAC;gBAER,CAAC;uBAED,CAAC;iBAEF,CAAC;oBACa,CAAC;oBACgB,CAAC;qBAGlC,CAAA;;;;;;gBAMF,CAAC;sBAA0B,CAAC;;;;;qBAMF,CAAC;qBAA4C,CAAC;;;;;;;;;qBAIhC,CAAC;6BAAoD,CAAC;;mBAE5C,CAAC;kBAAsB,CAAC;mBAC3C,CAAC;gBACN,CAAC;gBAAsC,CAAC;uBAA6C,CAAC;iBAAuC,CAAC;oBAC9I,CAAC;oBACT,CAAC;qBACqB,CAAA;;;;;;;;;gBAIS,CAAC;sBAA2B,CAAA;;;;;qBAII,CAAC;qBAA4C,CAAC;;;;;;;;;qBAQ9C,CAAC;6BAClB,CAAC;;mBACf,CAAC;kBAC7B,CAAC;mBAAyC,CAAC;gBACF,CAAC;gBACxB,CAAC;uBACR,CAAC;iBAAuC,CAAC;oBACpB,CAAC;oBAC5B,CAAC;qBAA2C,CAAC;;;;;;;;;;;gBAInB,CAAC;sBAA0B,CAAC;;;;;qBAI/D,CAAD;qBAA4C,CAAC;;;;;;;;;qBAIhB,CAAC;6BACzB,CAAC;;mBACJ,CAAC;kBAAsB,CAAC;mBACtB,CAAC;gBACF,CAAC;gBAAsC,CAAC;uBAC/B,CAAC;iBAAuC,CAAC;oBACxC,CAAC;oBAA0C,CAAC;qBACjD,CAAC;;;;;;;;;;;;;;OAoGT,CAAC;AAIF,eAAO,MAAM,qBAAqB;;;;;;;;aApXtB,CAAC;cAGX,CAAD;eAES,CAAC;;;aAIH,CAAC;cAEP,CAAF;eACgB,CAAC;;;;;;;;;;;;;;;;;;;aAgCd,CAAC;cACQ,CAAC;eACW,CAAC;;;;;;;;;;;;;;;;;;;aAqBe,CAAC;cACjB,CAAC;eACzB,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;aArEW,CAAC;cAGX,CAAD;eAES,CAAC;;;aAIH,CAAC;cAEP,CAAF;eACgB,CAAC;;;;;;;;;;;;;;;;;;;aAgCd,CAAC;cACQ,CAAC;eACW,CAAC;;;;;;;;;;;;;;;;;;;aAqBe,CAAC;cACjB,CAAC;eACzB,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;kzBA8iBA,CAAC;AAEF,eAAO,MAAM,kBAAkB,uBAK9B,CAAC"}

package/dist-tsc/base-plugins.js

@@ -1,6 +1,6 @@
 import { FileType, DataType, ViewType, CoordinationType, AsyncFunctionType, COMPONENT_COORDINATION_TYPES, ALT_ZARR_STORE_TYPES, } from '@vitessce/constants-internal';
 import { PluginFileType, PluginJointFileType, PluginViewType, PluginCoordinationType, PluginAsyncFunction, } from '@vitessce/plugins';
-import { z, obsEmbeddingCsvSchema, obsSetsCsvSchema, obsSpotsCsvSchema, obsPointsCsvSchema, obsLocationsCsvSchema, obsLabelsCsvSchema, featureLabelsCsvSchema, sampleSetsCsvSchema, obsSetsAnndataSchema, sampleSetsAnndataSchema, obsEmbeddingAnndataSchema, obsSpotsAnndataSchema, obsPointsAnndataSchema, obsLocationsAnndataSchema, obsLabelsAnndataSchema, obsFeatureMatrixAnndataSchema, obsFeatureColumnsAnndataSchema, obsSegmentationsAnndataSchema, featureLabelsAnndataSchema, sampleEdgesAnndataSchema, comparisonMetadataAnndataSchema, featureStatsAnndataSchema, featureSetStatsAnndataSchema, obsSetStatsAnndataSchema, rasterJsonSchema, anndataZarrSchema, anndataH5adSchema, spatialdataZarrSchema, anndataCellsZarrSchema, anndataCellSetsZarrSchema, anndataExpressionMatrixZarrSchema, cellsJsonSchema, imageOmeZarrSchema, imageOmeTiffSchema, imageSpatialdataSchema, obsSegmentationsOmeTiffSchema, obsSegmentationsOmeZarrSchema, obsSegmentationsSpatialdataSchema, obsFeatureMatrixSpatialdataSchema, obsSpotsSpatialdataSchema, obsPointsSpatialdataSchema, obsSetsSpatialdataSchema, obsEmbeddingSpatialdataSchema, obsSetPath, rgbArray, obsSetsSchema, imageLayerObj, cellsLayerObj, neighborhoodsLayerObj, moleculesLayerObj, meshGlbSchema, ngSchema, } from '@vitessce/schemas';
+import { z, obsEmbeddingCsvSchema, obsSetsCsvSchema, obsSpotsCsvSchema, obsPointsCsvSchema, obsLocationsCsvSchema, obsLabelsCsvSchema, featureLabelsCsvSchema, sampleSetsCsvSchema, obsSetsAnndataSchema, sampleSetsAnndataSchema, obsEmbeddingAnndataSchema, obsSpotsAnndataSchema, obsPointsAnndataSchema, obsLocationsAnndataSchema, obsLabelsAnndataSchema, obsFeatureMatrixAnndataSchema, obsFeatureColumnsAnndataSchema, obsSegmentationsAnndataSchema, featureLabelsAnndataSchema, sampleEdgesAnndataSchema, comparisonMetadataAnndataSchema, featureStatsAnndataSchema, featureSetStatsAnndataSchema, obsSetStatsAnndataSchema, rasterJsonSchema, anndataZarrSchema, anndataH5adSchema, spatialdataZarrSchema, anndataCellsZarrSchema, anndataCellSetsZarrSchema, anndataExpressionMatrixZarrSchema, cellsJsonSchema, imageOmeZarrSchema, imageOmeTiffSchema, imageSpatialdataSchema, obsSegmentationsOmeTiffSchema, obsSegmentationsOmeZarrSchema, obsSegmentationsSpatialdataSchema, obsFeatureMatrixSpatialdataSchema, obsSpotsSpatialdataSchema, obsPointsSpatialdataSchema, obsSetsSpatialdataSchema, obsEmbeddingSpatialdataSchema, obsSetPath, rgbArray, obsSetsSchema, imageLayerObj, cellsLayerObj, neighborhoodsLayerObj, moleculesLayerObj, meshGlbSchema, ngPrecomputedMeshSchema, ngPointAnnotationSchema, } from '@vitessce/schemas';
 // Register view type plugins
 import { DescriptionSubscriber } from '@vitessce/description';
 import { ObsSetsManagerSubscriber } from '@vitessce/obs-sets-manager';
@@ -39,7 +39,7 @@ OmeZarrLoader, OmeZarrAsObsSegmentationsLoader,
 // SpatialData
 SpatialDataTableSource, SpatialDataShapesSource, SpatialDataPointsSource, SpatialDataImageLoader, SpatialDataLabelsLoader, SpatialDataObsSpotsLoader, SpatialDataObsPointsLoader, SpatialDataObsSegmentationsLoader, SpatialDataObsSetsLoader, SpatialDataObsEmbeddingLoader, SpatialDataFeatureLabelsLoader, 
 // NG precomputed
-NgPrecomputedMeshSource, NgPrecomputedMeshLoader, } from '@vitessce/spatial-zarr';
+NgPassthroughSource, NgPrecomputedMeshLoader, NgAnnotationPointsLoader, } from '@vitessce/spatial-zarr';
 import { OmeTiffAsObsSegmentationsLoader, OmeTiffLoader, OmeTiffSource, } from '@vitessce/ome-tiff';
 import { GlbSource, GlbLoader, } from '@vitessce/glb';
 // Joint file types
@@ -160,7 +160,8 @@ export const baseFileTypes = [
     ...makeZarrFileTypes(FileType.OBS_EMBEDDING_SPATIALDATA_ZARR, DataType.OBS_EMBEDDING, SpatialDataObsEmbeddingLoader, SpatialDataTableSource, obsEmbeddingSpatialdataSchema),
     ...makeZarrFileTypes(FileType.FEATURE_LABELS_SPATIALDATA_ZARR, DataType.FEATURE_LABELS, SpatialDataFeatureLabelsLoader, SpatialDataTableSource, featureLabelsAnndataSchema),
     makeFileType(FileType.OBS_SEGMENTATIONS_GLB, DataType.OBS_SEGMENTATIONS, GlbLoader, GlbSource, meshGlbSchema),
-    makeFileType(FileType.OBS_SEGMENTATIONS_NG_PRECOMPUTED, DataType.OBS_SEGMENTATIONS, NgPrecomputedMeshLoader, NgPrecomputedMeshSource, ngSchema),
+    makeFileType(FileType.OBS_SEGMENTATIONS_NG_PRECOMPUTED, DataType.OBS_SEGMENTATIONS, NgPrecomputedMeshLoader, NgPassthroughSource, ngPrecomputedMeshSchema),
+    makeFileType(FileType.OBS_POINTS_NG_ANNOTATIONS, DataType.OBS_POINTS, NgAnnotationPointsLoader, NgPassthroughSource, ngPointAnnotationSchema),
     // All legacy file types
     makeFileType(FileType.OBS_FEATURE_MATRIX_EXPRESSION_MATRIX_ZARR, DataType.OBS_FEATURE_MATRIX, MatrixZarrAsObsFeatureMatrixLoader, ZarrDataSource, z.null()),
     makeFileType(FileType.IMAGE_RASTER_JSON, DataType.IMAGE, RasterJsonAsImageLoader, JsonSource, rasterJsonSchema),

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/all",
-  "version": "3.9.5",
+  "version": "4.0.0-test.0",
   "author": "HIDIVE Lab at HMS",
   "homepage": "http://vitessce.io",
   "repository": {
@@ -17,46 +17,64 @@
   ],
   "dependencies": {
     "zod": "^3.21.4",
-    "@vitessce/styles": "3.9.5",
-    "@vitessce/constants-internal": "3.9.5",
-    "@vitessce/abstract": "3.9.5",
-    "@vitessce/error": "3.9.5",
-    "@vitessce/csv": "3.9.5",
-    "@vitessce/feature-list": "3.9.5",
-    "@vitessce/description": "3.9.5",
-    "@vitessce/heatmap": "3.9.5",
-    "@vitessce/genomic-profiles": "3.9.5",
-    "@vitessce/glb": "3.9.5",
-    "@vitessce/json": "3.9.5",
-    "@vitessce/layer-controller": "3.9.5",
-    "@vitessce/layer-controller-beta": "3.9.5",
-    "@vitessce/link-controller": "3.9.5",
-    "@vitessce/ome-tiff": "3.9.5",
-    "@vitessce/obs-sets-manager": "3.9.5",
-    "@vitessce/scatterplot-embedding": "3.9.5",
-    "@vitessce/scatterplot-gating": "3.9.5",
-    "@vitessce/plugins": "3.9.5",
-    "@vitessce/schemas": "3.9.5",
-    "@vitessce/spatial-beta": "3.9.5",
-    "@vitessce/statistical-plots": "3.9.5",
-    "@vitessce/vit-s": "3.9.5",
-    "@vitessce/spatial": "3.9.5",
-    "@vitessce/status": "3.9.5",
-    "@vitessce/zarr": "3.9.5",
-    "@vitessce/spatial-zarr": "3.9.5",
-    "@vitessce/globals": "3.9.5",
-    "@vitessce/spatial-accelerated": "3.9.5",
-    "@vitessce/spatial-three": "3.9.5",
-    "@vitessce/biomarker-select": "3.9.5",
-    "@vitessce/neuroglancer": "3.9.5"
+    "@vitessce/constants-internal": "4.0.0-test.0",
+    "@vitessce/error": "4.0.0-test.0",
+    "@vitessce/csv": "4.0.0-test.0",
+    "@vitessce/styles": "4.0.0-test.0",
+    "@vitessce/genomic-profiles": "4.0.0-test.0",
+    "@vitessce/description": "4.0.0-test.0",
+    "@vitessce/abstract": "4.0.0-test.0",
+    "@vitessce/heatmap": "4.0.0-test.0",
+    "@vitessce/feature-list": "4.0.0-test.0",
+    "@vitessce/glb": "4.0.0-test.0",
+    "@vitessce/json": "4.0.0-test.0",
+    "@vitessce/layer-controller-beta": "4.0.0-test.0",
+    "@vitessce/link-controller": "4.0.0-test.0",
+    "@vitessce/ome-tiff": "4.0.0-test.0",
+    "@vitessce/plugins": "4.0.0-test.0",
+    "@vitessce/layer-controller": "4.0.0-test.0",
+    "@vitessce/obs-sets-manager": "4.0.0-test.0",
+    "@vitessce/spatial-beta": "4.0.0-test.0",
+    "@vitessce/statistical-plots": "4.0.0-test.0",
+    "@vitessce/scatterplot-embedding": "4.0.0-test.0",
+    "@vitessce/schemas": "4.0.0-test.0",
+    "@vitessce/scatterplot-gating": "4.0.0-test.0",
+    "@vitessce/vit-s": "4.0.0-test.0",
+    "@vitessce/globals": "4.0.0-test.0",
+    "@vitessce/spatial": "4.0.0-test.0",
+    "@vitessce/status": "4.0.0-test.0",
+    "@vitessce/spatial-zarr": "4.0.0-test.0",
+    "@vitessce/zarr": "4.0.0-test.0",
+    "@vitessce/spatial-three": "4.0.0-test.0",
+    "@vitessce/spatial-accelerated": "4.0.0-test.0",
+    "@vitessce/neuroglancer": "4.0.0-test.0",
+    "@vitessce/biomarker-select": "4.0.0-test.0"
   },
   "devDependencies": {
-    "@types/react": "^18.0.28",
-    "react": "18.3.1",
+    "@types/react": "^19.0.0",
+    "react": "19.1.0",
     "vitest": "^3.1.4"
   },
   "peerDependencies": {
-    "react": "^16.8.0 || ^17.0.0 || ^18.0.0 || ^19.0.0"
+    "react": "^18.0.0 || ^19.0.0",
+    "@react-three/fiber": "^8.0.0 || ^9.0.0",
+    "@react-three/drei": "^9.0.0 || ^10.0.0",
+    "three": ">=0.159.0",
+    "@react-three/xr": "^6.0.0"
+  },
+  "peerDependenciesMeta": {
+    "@react-three/fiber": {
+      "optional": true
+    },
+    "@react-three/drei": {
+      "optional": true
+    },
+    "@react-three/xr": {
+      "optional": true
+    },
+    "three": {
+      "optional": true
+    }
   },
   "scripts": {
     "start": "pnpm -C ../../../ run start-tsc",

package/src/base-plugins.ts

@@ -73,7 +73,8 @@ import {
   neighborhoodsLayerObj,
   moleculesLayerObj,
   meshGlbSchema,
-  ngSchema,
+  ngPrecomputedMeshSchema,
+  ngPointAnnotationSchema,
 } from '@vitessce/schemas';
 
 // Register view type plugins
@@ -183,8 +184,9 @@ import {
   SpatialDataObsEmbeddingLoader,
   SpatialDataFeatureLabelsLoader,
   // NG precomputed
-  NgPrecomputedMeshSource,
+  NgPassthroughSource,
   NgPrecomputedMeshLoader,
+  NgAnnotationPointsLoader,
 } from '@vitessce/spatial-zarr';
 
 import {
@@ -346,7 +348,9 @@ export const baseFileTypes = [
   ...makeZarrFileTypes(FileType.FEATURE_LABELS_SPATIALDATA_ZARR, DataType.FEATURE_LABELS, SpatialDataFeatureLabelsLoader, SpatialDataTableSource, featureLabelsAnndataSchema),
 
   makeFileType(FileType.OBS_SEGMENTATIONS_GLB, DataType.OBS_SEGMENTATIONS, GlbLoader, GlbSource, meshGlbSchema),
-  makeFileType(FileType.OBS_SEGMENTATIONS_NG_PRECOMPUTED, DataType.OBS_SEGMENTATIONS, NgPrecomputedMeshLoader, NgPrecomputedMeshSource, ngSchema),
+  makeFileType(FileType.OBS_SEGMENTATIONS_NG_PRECOMPUTED, DataType.OBS_SEGMENTATIONS, NgPrecomputedMeshLoader, NgPassthroughSource, ngPrecomputedMeshSchema),
+  makeFileType(FileType.OBS_POINTS_NG_ANNOTATIONS, DataType.OBS_POINTS, NgAnnotationPointsLoader, NgPassthroughSource, ngPointAnnotationSchema),
+
   // All legacy file types
   makeFileType(FileType.OBS_FEATURE_MATRIX_EXPRESSION_MATRIX_ZARR, DataType.OBS_FEATURE_MATRIX, MatrixZarrAsObsFeatureMatrixLoader, ZarrDataSource, z.null()),
   makeFileType(FileType.IMAGE_RASTER_JSON, DataType.IMAGE, RasterJsonAsImageLoader, JsonSource, rasterJsonSchema),