@vitessce/all 3.9.5 → 3.9.7

package/dist/index.js

@@ -1,4 +1,4 @@
-import { bR, bP, bN, bQ, bO, bM, bS } from "./index-CJ0WrLWz.js";
+import { bR, bP, bN, bQ, bO, bM, bS } from "./index-C_0Ni_kA.js";
 import { useComplexCoordination, useComplexCoordinationSecondary, useCoordination, useCoordinationScopes, useCoordinationScopesBy, useGridItemSize, useMultiCoordinationScopesNonNull, useMultiCoordinationScopesSecondaryNonNull, usePageModeView } from "@vitessce/vit-s";
 export {
   bR as PluginAsyncFunction,

package/dist/{jpeg-BpDeSW3W.js → jpeg-Bx2qADwx.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-CJ0WrLWz.js";
+import { aX as BaseDecoder } from "./index-C_0Ni_kA.js";
 const dctZigZag = new Int32Array([
   0,
   1,

package/dist/{lerc-ed9YjGeI.js → lerc-BVprPTmk.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-SxljTded.js";
-import { aG as getDefaultExportFromCjs, aX as BaseDecoder, aY as LercParameters, aZ as LercAddCompression } from "./index-CJ0WrLWz.js";
+import { aG as getDefaultExportFromCjs, aX as BaseDecoder, aY as LercParameters, aZ as LercAddCompression } from "./index-C_0Ni_kA.js";
 var LercDecode = { exports: {} };
 var hasRequiredLercDecode;
 function requireLercDecode() {

package/dist/{lzw-7E8bYZIo.js → lzw-xRmfciyv.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-CJ0WrLWz.js";
+import { aX as BaseDecoder } from "./index-C_0Ni_kA.js";
 const MIN_BITS = 9;
 const CLEAR_CODE = 256;
 const EOI_CODE = 257;

package/dist/{packbits-COn2hgkH.js → packbits-DymgLbq7.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-CJ0WrLWz.js";
+import { aX as BaseDecoder } from "./index-C_0Ni_kA.js";
 class PackbitsDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     const dataView = new DataView(buffer);

package/dist/{raw-C5vEl2Zl.js → raw-BHe10UqL.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-CJ0WrLWz.js";
+import { aX as BaseDecoder } from "./index-C_0Ni_kA.js";
 class RawDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return buffer;

package/dist/{troika-three-text.esm-Bn837OOO.js → troika-three-text.esm-C_yrtgNH.js}

@@ -1,4 +1,4 @@
-import { bH as MeshDistanceMaterial, bI as MeshDepthMaterial, bJ as RGBADepthPacking, ae as UniformsUtils, bK as ShaderChunk, a9 as InstancedBufferGeometry, a8 as Sphere, a7 as Box3, am as BackSide, u as DoubleSide, z as Mesh, a5 as FrontSide, v as MeshBasicMaterial, C as Color, e as Vector3, M as Matrix4, V as Vector2, ap as Matrix3, ag as Vector4, a1 as Texture, l as LinearFilter, aD as PlaneGeometry, x as BufferGeometry, aa as Float32BufferAttribute, bL as InstancedBufferAttribute } from "./index-CJ0WrLWz.js";
+import { bH as MeshDistanceMaterial, bI as MeshDepthMaterial, bJ as RGBADepthPacking, ae as UniformsUtils, bK as ShaderChunk, a9 as InstancedBufferGeometry, a8 as Sphere, a7 as Box3, am as BackSide, u as DoubleSide, z as Mesh, a5 as FrontSide, v as MeshBasicMaterial, C as Color, e as Vector3, M as Matrix4, V as Vector2, ap as Matrix3, ag as Vector4, a1 as Texture, l as LinearFilter, aD as PlaneGeometry, x as BufferGeometry, aa as Float32BufferAttribute, bL as InstancedBufferAttribute } from "./index-C_0Ni_kA.js";
 function workerBootstrap() {
   var modules = /* @__PURE__ */ Object.create(null);
   function registerModule(ref, callback) {

package/dist/{webimage-f_OnujWl.js → webimage-DBDXmZdm.js}

@@ -1,4 +1,4 @@
-import { aX as BaseDecoder } from "./index-CJ0WrLWz.js";
+import { aX as BaseDecoder } from "./index-C_0Ni_kA.js";
 class WebImageDecoder extends BaseDecoder {
   constructor() {
     super();

package/dist-tsc/base-plugins.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"base-plugins.d.ts","sourceRoot":"","sources":["../src/base-plugins.ts"],"names":[],"mappings":"AAWA,OAAO,EACL,cAAc,EACd,mBAAmB,EACnB,cAAc,EACd,sBAAsB,EACtB,mBAAmB,EACpB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,UAAU,EACV,UAAU,EACX,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EACL,CAAC,EAsDF,MAAM,mBAAmB,CAAC;AAqL3B,eAAO,MAAM,aAAa,kBA+BzB,CAAC;AAEF,eAAO,MAAM,aAAa,wDA6EzB,CAAC;AAEF,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;yBA2FoC,CAAA;gCAC9C,CAAC;;;yBAGF,CAAC;gCAEa,CAAC;;;;;;;;;;;;;;;;iBAapB,CAAC;;;;iBAMP,CAAC;;;;;;;YAWW,CAAC;;;YAGX,CAAC;;;;;;;YAKsD,CAAC;;;YAClC,CAAC;;;;;;;YAMkB,CAAC;;;YAEtC,CAAC;;;;;;;;;;;;;;YAWI,CAAC;;;YAGd,CAAC;;;;;;;;YAMA,CAAC;;;;YAGkB,CAAC;;;;;;;;;;;;;;;;;;;;;;;;yBAyBxB,CAAC;gCAED,CAAH;;;;;;;;iBAQG,CAAC;;;;YACgB,CAAC;;;;YACI,CAAC;;;;YACO,CAAC;;;;;;;YAEhC,CAAC;;;;YACa,CAAC;;;;;;;;;;;;;;;;;;;;yBAIiE,CAAC;gCACvD,CAAC;;;;;;;;iBAE8C,CAAC;;;;YACK,CAAC;;;;YACQ,CAAC;;;;YAClC,CAAC;;;;;;;YACoC,CAAC;;;;YACzB,CAAC;;;;;;;;;;;wBAiEo7C,CAAC;;;wBAA6E,CAAC;;;;;;;;iBAAwR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;;;iBAA+X,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;;;;;;;;yBAAkZ,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;yBAA8E,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;;;;;iBAAgR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;;;;;qBAAygB,CAAC;;;;qBAA2J,CAAC;;;;;;qBAAsN,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;qBAA0K,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;;;YAAoP,CAAC;;;YAAmE,CAAC;;;;;;;;YAAuR,CAAC;;;;YAAkG,CAAC;;;;;;;;;;;;;;;;;;;;;;wBAAmoB,CAAC;;;;iBAAyG,CAAC;wBAA8C,CAAC;;;;iBAAkG,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;;yBAAiH,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;iBAAiG,CAAC;wBAA8C,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;YAAgG,CAAC;;;;YAAmG,CAAC;;;;;;;;;;;;wBAA6R,CAAC;;;;iBAAyG,CAAC;wBAA8C,CAAC;;;;iBAAkG,CAAC;wBAA8C,CAAC;0BAAgD,CAAC;wBAA8C,CAAC;;;;yBAAiH,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;iBAAiG,CAAC;wBAA8C,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;YAAgG,CAAC;;;;YAAmG,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;sBAxjB3rS,CAAC;;;;;qBAG2B,CAAC;qBACpB,CAAC;;;;;;;;;qBAGsB,CAAC;6BACD,CAAC;;sBAClC,CAAC;;;;;qBAMQ,CAAC;qBAEL,CAAC;;;;;;;;;qBAWX,CAAC;6BAEM,CAAC;;;;;;;;;;;;;kBAuBQ,CAAC;mBAEjB,CAAA;gBAGY,CAAC;gBACK,CAAC;uBAElB,CAAC;iBACc,CAAC;oBAEb,CAAC;oBACS,CAAC;qBAEP,CAAC;;kBAEL,CAAC;mBACc,CAAC;gBAEb,CAAC;gBACM,CAAC;uBAIpB,CAAF;iBACqB,CAAC;oBACI,CAAC;oBAItB,CAAC;qBAEiB,CAAC;;;;;;gBAMV,CAAC;sBACD,CAAC;;;;;qBAOV,CAAC;qBAEJ,CAAD;;;;;;;;;qBAagB,CAAC;6BAGN,CAAC;;mBAEA,CAAC;kBACZ,CAAC;mBAED,CAAA;gBAEU,CAAC;gBAER,CAAC;uBAED,CAAC;iBAEF,CAAC;oBACa,CAAC;oBACgB,CAAC;qBAGlC,CAAA;;;;;;gBAMF,CAAC;sBAA0B,CAAC;;;;;qBAMF,CAAC;qBAA4C,CAAC;;;;;;;;;qBAIhC,CAAC;6BAAoD,CAAC;;mBAE5C,CAAC;kBAAsB,CAAC;mBAC3C,CAAC;gBACN,CAAC;gBAAsC,CAAC;uBAA6C,CAAC;iBAAuC,CAAC;oBAC9I,CAAC;oBACT,CAAC;qBACqB,CAAA;;;;;;;;;gBAIS,CAAC;sBAA2B,CAAA;;;;;qBAII,CAAC;qBAA4C,CAAC;;;;;;;;;qBAQ9C,CAAC;6BAClB,CAAC;;mBACf,CAAC;kBAC7B,CAAC;mBAAyC,CAAC;gBACF,CAAC;gBACxB,CAAC;uBACR,CAAC;iBAAuC,CAAC;oBACpB,CAAC;oBAC5B,CAAC;qBAA2C,CAAC;;;;;;;;;;;gBAInB,CAAC;sBAA0B,CAAC;;;;;qBAI/D,CAAD;qBAA4C,CAAC;;;;;;;;;qBAIhB,CAAC;6BACzB,CAAC;;mBACJ,CAAC;kBAAsB,CAAC;mBACtB,CAAC;gBACF,CAAC;gBAAsC,CAAC;uBAC/B,CAAC;iBAAuC,CAAC;oBACxC,CAAC;oBAA0C,CAAC;qBACjD,CAAC;;;;;;;;;;;;;;OAoGT,CAAC;AAIF,eAAO,MAAM,qBAAqB;;;;;;;;aApXtB,CAAC;cAGX,CAAD;eAES,CAAC;;;aAIH,CAAC;cAEP,CAAF;eACgB,CAAC;;;;;;;;;;;;;;;;;;;aAgCd,CAAC;cACQ,CAAC;eACW,CAAC;;;;;;;;;;;;;;;;;;;aAqBe,CAAC;cACjB,CAAC;eACzB,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;aArEW,CAAC;cAGX,CAAD;eAES,CAAC;;;aAIH,CAAC;cAEP,CAAF;eACgB,CAAC;;;;;;;;;;;;;;;;;;;aAgCd,CAAC;cACQ,CAAC;eACW,CAAC;;;;;;;;;;;;;;;;;;;aAqBe,CAAC;cACjB,CAAC;eACzB,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;kzBA8iBA,CAAC;AAEF,eAAO,MAAM,kBAAkB,uBAK9B,CAAC"}

package/dist-tsc/base-plugins.js

@@ -1,6 +1,6 @@
 import { FileType, DataType, ViewType, CoordinationType, AsyncFunctionType, COMPONENT_COORDINATION_TYPES, ALT_ZARR_STORE_TYPES, } from '@vitessce/constants-internal';
 import { PluginFileType, PluginJointFileType, PluginViewType, PluginCoordinationType, PluginAsyncFunction, } from '@vitessce/plugins';
-import { z, obsEmbeddingCsvSchema, obsSetsCsvSchema, obsSpotsCsvSchema, obsPointsCsvSchema, obsLocationsCsvSchema, obsLabelsCsvSchema, featureLabelsCsvSchema, sampleSetsCsvSchema, obsSetsAnndataSchema, sampleSetsAnndataSchema, obsEmbeddingAnndataSchema, obsSpotsAnndataSchema, obsPointsAnndataSchema, obsLocationsAnndataSchema, obsLabelsAnndataSchema, obsFeatureMatrixAnndataSchema, obsFeatureColumnsAnndataSchema, obsSegmentationsAnndataSchema, featureLabelsAnndataSchema, sampleEdgesAnndataSchema, comparisonMetadataAnndataSchema, featureStatsAnndataSchema, featureSetStatsAnndataSchema, obsSetStatsAnndataSchema, rasterJsonSchema, anndataZarrSchema, anndataH5adSchema, spatialdataZarrSchema, anndataCellsZarrSchema, anndataCellSetsZarrSchema, anndataExpressionMatrixZarrSchema, cellsJsonSchema, imageOmeZarrSchema, imageOmeTiffSchema, imageSpatialdataSchema, obsSegmentationsOmeTiffSchema, obsSegmentationsOmeZarrSchema, obsSegmentationsSpatialdataSchema, obsFeatureMatrixSpatialdataSchema, obsSpotsSpatialdataSchema, obsPointsSpatialdataSchema, obsSetsSpatialdataSchema, obsEmbeddingSpatialdataSchema, obsSetPath, rgbArray, obsSetsSchema, imageLayerObj, cellsLayerObj, neighborhoodsLayerObj, moleculesLayerObj, meshGlbSchema, ngSchema, } from '@vitessce/schemas';
+import { z, obsEmbeddingCsvSchema, obsSetsCsvSchema, obsSpotsCsvSchema, obsPointsCsvSchema, obsLocationsCsvSchema, obsLabelsCsvSchema, featureLabelsCsvSchema, sampleSetsCsvSchema, obsSetsAnndataSchema, sampleSetsAnndataSchema, obsEmbeddingAnndataSchema, obsSpotsAnndataSchema, obsPointsAnndataSchema, obsLocationsAnndataSchema, obsLabelsAnndataSchema, obsFeatureMatrixAnndataSchema, obsFeatureColumnsAnndataSchema, obsSegmentationsAnndataSchema, featureLabelsAnndataSchema, sampleEdgesAnndataSchema, comparisonMetadataAnndataSchema, featureStatsAnndataSchema, featureSetStatsAnndataSchema, obsSetStatsAnndataSchema, rasterJsonSchema, anndataZarrSchema, anndataH5adSchema, spatialdataZarrSchema, anndataCellsZarrSchema, anndataCellSetsZarrSchema, anndataExpressionMatrixZarrSchema, cellsJsonSchema, imageOmeZarrSchema, imageOmeTiffSchema, imageSpatialdataSchema, obsSegmentationsOmeTiffSchema, obsSegmentationsOmeZarrSchema, obsSegmentationsSpatialdataSchema, obsFeatureMatrixSpatialdataSchema, obsSpotsSpatialdataSchema, obsPointsSpatialdataSchema, obsSetsSpatialdataSchema, obsEmbeddingSpatialdataSchema, obsSetPath, rgbArray, obsSetsSchema, imageLayerObj, cellsLayerObj, neighborhoodsLayerObj, moleculesLayerObj, meshGlbSchema, ngPrecomputedMeshSchema, ngPointAnnotationSchema, } from '@vitessce/schemas';
 // Register view type plugins
 import { DescriptionSubscriber } from '@vitessce/description';
 import { ObsSetsManagerSubscriber } from '@vitessce/obs-sets-manager';
@@ -39,7 +39,7 @@ OmeZarrLoader, OmeZarrAsObsSegmentationsLoader,
 // SpatialData
 SpatialDataTableSource, SpatialDataShapesSource, SpatialDataPointsSource, SpatialDataImageLoader, SpatialDataLabelsLoader, SpatialDataObsSpotsLoader, SpatialDataObsPointsLoader, SpatialDataObsSegmentationsLoader, SpatialDataObsSetsLoader, SpatialDataObsEmbeddingLoader, SpatialDataFeatureLabelsLoader, 
 // NG precomputed
-NgPrecomputedMeshSource, NgPrecomputedMeshLoader, } from '@vitessce/spatial-zarr';
+NgPassthroughSource, NgPrecomputedMeshLoader, NgAnnotationPointsLoader, } from '@vitessce/spatial-zarr';
 import { OmeTiffAsObsSegmentationsLoader, OmeTiffLoader, OmeTiffSource, } from '@vitessce/ome-tiff';
 import { GlbSource, GlbLoader, } from '@vitessce/glb';
 // Joint file types
@@ -160,7 +160,8 @@ export const baseFileTypes = [
     ...makeZarrFileTypes(FileType.OBS_EMBEDDING_SPATIALDATA_ZARR, DataType.OBS_EMBEDDING, SpatialDataObsEmbeddingLoader, SpatialDataTableSource, obsEmbeddingSpatialdataSchema),
     ...makeZarrFileTypes(FileType.FEATURE_LABELS_SPATIALDATA_ZARR, DataType.FEATURE_LABELS, SpatialDataFeatureLabelsLoader, SpatialDataTableSource, featureLabelsAnndataSchema),
     makeFileType(FileType.OBS_SEGMENTATIONS_GLB, DataType.OBS_SEGMENTATIONS, GlbLoader, GlbSource, meshGlbSchema),
-    makeFileType(FileType.OBS_SEGMENTATIONS_NG_PRECOMPUTED, DataType.OBS_SEGMENTATIONS, NgPrecomputedMeshLoader, NgPrecomputedMeshSource, ngSchema),
+    makeFileType(FileType.OBS_SEGMENTATIONS_NG_PRECOMPUTED, DataType.OBS_SEGMENTATIONS, NgPrecomputedMeshLoader, NgPassthroughSource, ngPrecomputedMeshSchema),
+    makeFileType(FileType.OBS_POINTS_NG_ANNOTATIONS, DataType.OBS_POINTS, NgAnnotationPointsLoader, NgPassthroughSource, ngPointAnnotationSchema),
     // All legacy file types
     makeFileType(FileType.OBS_FEATURE_MATRIX_EXPRESSION_MATRIX_ZARR, DataType.OBS_FEATURE_MATRIX, MatrixZarrAsObsFeatureMatrixLoader, ZarrDataSource, z.null()),
     makeFileType(FileType.IMAGE_RASTER_JSON, DataType.IMAGE, RasterJsonAsImageLoader, JsonSource, rasterJsonSchema),

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/all",
-  "version": "3.9.5",
+  "version": "3.9.7",
   "author": "HIDIVE Lab at HMS",
   "homepage": "http://vitessce.io",
   "repository": {
@@ -17,38 +17,38 @@
   ],
   "dependencies": {
     "zod": "^3.21.4",
-    "@vitessce/styles": "3.9.5",
-    "@vitessce/constants-internal": "3.9.5",
-    "@vitessce/abstract": "3.9.5",
-    "@vitessce/error": "3.9.5",
-    "@vitessce/csv": "3.9.5",
-    "@vitessce/feature-list": "3.9.5",
-    "@vitessce/description": "3.9.5",
-    "@vitessce/heatmap": "3.9.5",
-    "@vitessce/genomic-profiles": "3.9.5",
-    "@vitessce/glb": "3.9.5",
-    "@vitessce/json": "3.9.5",
-    "@vitessce/layer-controller": "3.9.5",
-    "@vitessce/layer-controller-beta": "3.9.5",
-    "@vitessce/link-controller": "3.9.5",
-    "@vitessce/ome-tiff": "3.9.5",
-    "@vitessce/obs-sets-manager": "3.9.5",
-    "@vitessce/scatterplot-embedding": "3.9.5",
-    "@vitessce/scatterplot-gating": "3.9.5",
-    "@vitessce/plugins": "3.9.5",
-    "@vitessce/schemas": "3.9.5",
-    "@vitessce/spatial-beta": "3.9.5",
-    "@vitessce/statistical-plots": "3.9.5",
-    "@vitessce/vit-s": "3.9.5",
-    "@vitessce/spatial": "3.9.5",
-    "@vitessce/status": "3.9.5",
-    "@vitessce/zarr": "3.9.5",
-    "@vitessce/spatial-zarr": "3.9.5",
-    "@vitessce/globals": "3.9.5",
-    "@vitessce/spatial-accelerated": "3.9.5",
-    "@vitessce/spatial-three": "3.9.5",
-    "@vitessce/biomarker-select": "3.9.5",
-    "@vitessce/neuroglancer": "3.9.5"
+    "@vitessce/styles": "3.9.7",
+    "@vitessce/csv": "3.9.7",
+    "@vitessce/error": "3.9.7",
+    "@vitessce/description": "3.9.7",
+    "@vitessce/constants-internal": "3.9.7",
+    "@vitessce/feature-list": "3.9.7",
+    "@vitessce/genomic-profiles": "3.9.7",
+    "@vitessce/abstract": "3.9.7",
+    "@vitessce/heatmap": "3.9.7",
+    "@vitessce/glb": "3.9.7",
+    "@vitessce/json": "3.9.7",
+    "@vitessce/layer-controller": "3.9.7",
+    "@vitessce/layer-controller-beta": "3.9.7",
+    "@vitessce/link-controller": "3.9.7",
+    "@vitessce/obs-sets-manager": "3.9.7",
+    "@vitessce/plugins": "3.9.7",
+    "@vitessce/ome-tiff": "3.9.7",
+    "@vitessce/scatterplot-embedding": "3.9.7",
+    "@vitessce/scatterplot-gating": "3.9.7",
+    "@vitessce/schemas": "3.9.7",
+    "@vitessce/spatial-beta": "3.9.7",
+    "@vitessce/spatial": "3.9.7",
+    "@vitessce/statistical-plots": "3.9.7",
+    "@vitessce/status": "3.9.7",
+    "@vitessce/zarr": "3.9.7",
+    "@vitessce/vit-s": "3.9.7",
+    "@vitessce/globals": "3.9.7",
+    "@vitessce/spatial-three": "3.9.7",
+    "@vitessce/spatial-zarr": "3.9.7",
+    "@vitessce/biomarker-select": "3.9.7",
+    "@vitessce/spatial-accelerated": "3.9.7",
+    "@vitessce/neuroglancer": "3.9.7"
   },
   "devDependencies": {
     "@types/react": "^18.0.28",

package/src/base-plugins.ts

@@ -73,7 +73,8 @@ import {
   neighborhoodsLayerObj,
   moleculesLayerObj,
   meshGlbSchema,
-  ngSchema,
+  ngPrecomputedMeshSchema,
+  ngPointAnnotationSchema,
 } from '@vitessce/schemas';
 
 // Register view type plugins
@@ -183,8 +184,9 @@ import {
   SpatialDataObsEmbeddingLoader,
   SpatialDataFeatureLabelsLoader,
   // NG precomputed
-  NgPrecomputedMeshSource,
+  NgPassthroughSource,
   NgPrecomputedMeshLoader,
+  NgAnnotationPointsLoader,
 } from '@vitessce/spatial-zarr';
 
 import {
@@ -346,7 +348,9 @@ export const baseFileTypes = [
   ...makeZarrFileTypes(FileType.FEATURE_LABELS_SPATIALDATA_ZARR, DataType.FEATURE_LABELS, SpatialDataFeatureLabelsLoader, SpatialDataTableSource, featureLabelsAnndataSchema),
 
   makeFileType(FileType.OBS_SEGMENTATIONS_GLB, DataType.OBS_SEGMENTATIONS, GlbLoader, GlbSource, meshGlbSchema),
-  makeFileType(FileType.OBS_SEGMENTATIONS_NG_PRECOMPUTED, DataType.OBS_SEGMENTATIONS, NgPrecomputedMeshLoader, NgPrecomputedMeshSource, ngSchema),
+  makeFileType(FileType.OBS_SEGMENTATIONS_NG_PRECOMPUTED, DataType.OBS_SEGMENTATIONS, NgPrecomputedMeshLoader, NgPassthroughSource, ngPrecomputedMeshSchema),
+  makeFileType(FileType.OBS_POINTS_NG_ANNOTATIONS, DataType.OBS_POINTS, NgAnnotationPointsLoader, NgPassthroughSource, ngPointAnnotationSchema),
+
   // All legacy file types
   makeFileType(FileType.OBS_FEATURE_MATRIX_EXPRESSION_MATRIX_ZARR, DataType.OBS_FEATURE_MATRIX, MatrixZarrAsObsFeatureMatrixLoader, ZarrDataSource, z.null()),
   makeFileType(FileType.IMAGE_RASTER_JSON, DataType.IMAGE, RasterJsonAsImageLoader, JsonSource, rasterJsonSchema),