@vitessce/all 3.6.6 → 3.6.7
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/{ReactNeuroglancer-CRsoM-3K.js → ReactNeuroglancer-ByNTvs8S.js} +1 -1
- package/dist/{deflate-DJ9B6brl.js → deflate-DeB7w2U5.js} +1 -1
- package/dist/{higlass-5knyvxVO.js → higlass-CDi6EYpj.js} +1 -1
- package/dist/{index-pdSpwbGV.js → index-CtqCS3uD.js} +2 -2
- package/dist/{index-DYlK7EWv.js → index-DC7r29QD.js} +22 -17
- package/dist/index.js +1 -1
- package/dist/{jpeg-DyRJl_kr.js → jpeg-DNI-WseC.js} +1 -1
- package/dist/{lerc-CrZZtbeg.js → lerc-DxNR6M7w.js} +1 -1
- package/dist/{lzw-BUi4QaSY.js → lzw-KwO5Ne_b.js} +1 -1
- package/dist/{packbits-CF7Rjdcd.js → packbits-XVxuFt5L.js} +1 -1
- package/dist/{raw-BXkfQzOV.js → raw-DwJw-iyd.js} +1 -1
- package/dist/{troika-three-text.esm-CfbCff4s.js → troika-three-text.esm-DEclBFBv.js} +1 -1
- package/dist/{webimage-BUJ4i07y.js → webimage-CJom0KqV.js} +1 -1
- package/package.json +31 -31
@@ -1,4 +1,4 @@
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import { g as getDefaultExportFromCjs, aV as requireAssign, aW as require_export, aX as require_core, aY as require_fails, aZ as require_toObject, a_ as require_objectKeys, a$ as require_cof, b0 as require_wks, b1 as require_iterators, b2 as requireWeb_dom_iterable, b3 as requireEs6_string_iterator, b4 as require_anObject, b5 as require_hide, b6 as require_ctx, b7 as require_toLength, b8 as require_global, b9 as require_objectDp, ba as require_descriptors, bb as require_isObject, bc as require_objectCreate, bd as require_iterDefine, be as require_iterStep, bf as require_meta, bg as require_isArray, bh as require_iobject, bi as require_setToStringTag, bj as require_aFunction, bk as requireIterator, bl as require_propertyDesc, aS as commonjsGlobal, bm as requireEs6_symbol, bn as requireDefineProperty, bo as require_toIobject, bp as require_objectGopd, bq as require_html, br as require_domCreate, bs as require_library, bt as requireSymbol, bu as require_objectPie, bv as require_has, bw as require_redefine, bx as require_objectAssign, by as getAugmentedNamespace, bz as requirePropTypes, aI as jsxRuntimeExports } from "./index-
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import { g as getDefaultExportFromCjs, aV as requireAssign, aW as require_export, aX as require_core, aY as require_fails, aZ as require_toObject, a_ as require_objectKeys, a$ as require_cof, b0 as require_wks, b1 as require_iterators, b2 as requireWeb_dom_iterable, b3 as requireEs6_string_iterator, b4 as require_anObject, b5 as require_hide, b6 as require_ctx, b7 as require_toLength, b8 as require_global, b9 as require_objectDp, ba as require_descriptors, bb as require_isObject, bc as require_objectCreate, bd as require_iterDefine, be as require_iterStep, bf as require_meta, bg as require_isArray, bh as require_iobject, bi as require_setToStringTag, bj as require_aFunction, bk as requireIterator, bl as require_propertyDesc, aS as commonjsGlobal, bm as requireEs6_symbol, bn as requireDefineProperty, bo as require_toIobject, bp as require_objectGopd, bq as require_html, br as require_domCreate, bs as require_library, bt as requireSymbol, bu as require_objectPie, bv as require_has, bw as require_redefine, bx as require_objectAssign, by as getAugmentedNamespace, bz as requirePropTypes, aI as jsxRuntimeExports } from "./index-DC7r29QD.js";
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import React__default from "react";
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var lib = {};
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var assignExports = requireAssign();
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@@ -1,5 +1,5 @@
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import { i as inflate_1 } from "./pako.esm-SxljTded.js";
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import { aP as BaseDecoder } from "./index-
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import { aP as BaseDecoder } from "./index-DC7r29QD.js";
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class DeflateDecoder extends BaseDecoder {
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decodeBlock(buffer) {
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return inflate_1(new Uint8Array(buffer)).buffer;
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@@ -1,7 +1,7 @@
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import * as React$7 from "react";
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import React__default, { isValidElement, PureComponent, Component, createElement, createContext, createRef } from "react";
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import ReactDOM__default, { findDOMNode as findDOMNode$1 } from "react-dom";
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import { aS as commonjsGlobal$1, aT as requireObjectAssign, g as getDefaultExportFromCjs$1, aU as earcut } from "./index-
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import { aS as commonjsGlobal$1, aT as requireObjectAssign, g as getDefaultExportFromCjs$1, aU as earcut } from "./index-DC7r29QD.js";
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var promise = {};
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var hasRequiredPromise;
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function requirePromise() {
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@@ -1,4 +1,4 @@
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import { g as getDefaultExportFromCjs, R as Raycaster, O as OrthographicCamera, P as PerspectiveCamera, S as Scene, a as PCFSoftShadowMap, V as VSMShadowMap, b as PCFShadowMap, B as BasicShadowMap, N as NoToneMapping, A as ACESFilmicToneMapping, c as Vector3, d as Vector2, C as Clock, W as WebGLRenderer, e as Camera, f as BufferGeometry, M as Material, L as Layers, T as Texture, h as RGBAFormat, U as UnsignedByteType, i as Color, _ as _extends, j as THREE, G as Group, k as Matrix4, l as TrianglesDrawMode, m as TriangleFanDrawMode, n as TriangleStripDrawMode, o as REVISION, E as EventDispatcher, p as MOUSE, q as TOUCH, r as Spherical, Q as Quaternion, s as Ray$1, t as Plane, u as Loader, v as LoaderUtils, F as FileLoader, w as MeshPhysicalMaterial, x as SpotLight, y as PointLight, D as DirectionalLight, I as InstancedMesh, z as Object3D, H as TextureLoader, J as ImageBitmapLoader, K as BufferAttribute, X as InterleavedBuffer, Y as LinearMipmapLinearFilter, Z as NearestMipmapLinearFilter, $ as LinearMipmapNearestFilter, a0 as NearestMipmapNearestFilter, a1 as LinearFilter, a2 as NearestFilter, a3 as RepeatWrapping, a4 as MirroredRepeatWrapping, a5 as ClampToEdgeWrapping, a6 as PointsMaterial, a7 as LineBasicMaterial, a8 as MeshStandardMaterial, a9 as DoubleSide, aa as MeshBasicMaterial, ab as PropertyBinding, ac as SkinnedMesh, ad as Mesh, ae as LineSegments, af as Line$1, ag as LineLoop, ah as Points, ai as MathUtils, aj as Skeleton, ak as InterpolateDiscrete, al as InterpolateLinear, am as AnimationClip, an as Bone, ao as InterleavedBufferAttribute, ap as VectorKeyframeTrack, aq as QuaternionKeyframeTrack, ar as NumberKeyframeTrack, as as FrontSide, at as Interpolant, au as Box3, av as Sphere, aw as InstancedBufferGeometry, ax as Float32BufferAttribute, ay as InstancedInterleavedBuffer, az as WireframeGeometry, aA as ShaderMaterial, aB as UniformsUtils, aC as UniformsLib, aD as Vector4, aE as Line3, aF as SphereGeometry, aG as Triangle, aH as BackSide, aI as jsxRuntimeExports, aJ as Matrix3, aK as CoordinationType, aL as Data3DTexture, aM as RedFormat, aN as FloatType, aO as getImageSize } from "./index-
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import { g as getDefaultExportFromCjs, R as Raycaster, O as OrthographicCamera, P as PerspectiveCamera, S as Scene, a as PCFSoftShadowMap, V as VSMShadowMap, b as PCFShadowMap, B as BasicShadowMap, N as NoToneMapping, A as ACESFilmicToneMapping, c as Vector3, d as Vector2, C as Clock, W as WebGLRenderer, e as Camera, f as BufferGeometry, M as Material, L as Layers, T as Texture, h as RGBAFormat, U as UnsignedByteType, i as Color, _ as _extends, j as THREE, G as Group, k as Matrix4, l as TrianglesDrawMode, m as TriangleFanDrawMode, n as TriangleStripDrawMode, o as REVISION, E as EventDispatcher, p as MOUSE, q as TOUCH, r as Spherical, Q as Quaternion, s as Ray$1, t as Plane, u as Loader, v as LoaderUtils, F as FileLoader, w as MeshPhysicalMaterial, x as SpotLight, y as PointLight, D as DirectionalLight, I as InstancedMesh, z as Object3D, H as TextureLoader, J as ImageBitmapLoader, K as BufferAttribute, X as InterleavedBuffer, Y as LinearMipmapLinearFilter, Z as NearestMipmapLinearFilter, $ as LinearMipmapNearestFilter, a0 as NearestMipmapNearestFilter, a1 as LinearFilter, a2 as NearestFilter, a3 as RepeatWrapping, a4 as MirroredRepeatWrapping, a5 as ClampToEdgeWrapping, a6 as PointsMaterial, a7 as LineBasicMaterial, a8 as MeshStandardMaterial, a9 as DoubleSide, aa as MeshBasicMaterial, ab as PropertyBinding, ac as SkinnedMesh, ad as Mesh, ae as LineSegments, af as Line$1, ag as LineLoop, ah as Points, ai as MathUtils, aj as Skeleton, ak as InterpolateDiscrete, al as InterpolateLinear, am as AnimationClip, an as Bone, ao as InterleavedBufferAttribute, ap as VectorKeyframeTrack, aq as QuaternionKeyframeTrack, ar as NumberKeyframeTrack, as as FrontSide, at as Interpolant, au as Box3, av as Sphere, aw as InstancedBufferGeometry, ax as Float32BufferAttribute, ay as InstancedInterleavedBuffer, az as WireframeGeometry, aA as ShaderMaterial, aB as UniformsUtils, aC as UniformsLib, aD as Vector4, aE as Line3, aF as SphereGeometry, aG as Triangle, aH as BackSide, aI as jsxRuntimeExports, aJ as Matrix3, aK as CoordinationType, aL as Data3DTexture, aM as RedFormat, aN as FloatType, aO as getImageSize } from "./index-DC7r29QD.js";
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import * as React from "react";
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import React__default, { useReducer, useRef, useEffect, useLayoutEffect, useDebugValue, useState, useMemo, forwardRef } from "react";
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var constants = { exports: {} };
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@@ -23637,7 +23637,7 @@ const Text = /* @__PURE__ */ React.forwardRef(({
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const {
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Text: TextMeshImpl,
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preloadFont
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} = suspend(async () => import("./troika-three-text.esm-
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} = suspend(async () => import("./troika-three-text.esm-DEclBFBv.js"), []);
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const invalidate2 = useThree(({
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invalidate: invalidate3
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}) => invalidate3);
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@@ -209306,22 +209306,22 @@ async function getDecoder(fileDirectory) {
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const Decoder = await importFn();
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return new Decoder(fileDirectory);
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}
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addDecoder([void 0, 1], () => import("./raw-
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addDecoder(5, () => import("./lzw-
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addDecoder([void 0, 1], () => import("./raw-DwJw-iyd.js").then((m2) => m2.default));
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addDecoder(5, () => import("./lzw-KwO5Ne_b.js").then((m2) => m2.default));
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addDecoder(6, () => {
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throw new Error("old style JPEG compression is not supported.");
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});
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addDecoder(7, () => import("./jpeg-
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addDecoder([8, 32946], () => import("./deflate-
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addDecoder(32773, () => import("./packbits-
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addDecoder(7, () => import("./jpeg-DNI-WseC.js").then((m2) => m2.default));
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addDecoder([8, 32946], () => import("./deflate-DeB7w2U5.js").then((m2) => m2.default));
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addDecoder(32773, () => import("./packbits-XVxuFt5L.js").then((m2) => m2.default));
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addDecoder(
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34887,
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() => import("./lerc-
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() => import("./lerc-DxNR6M7w.js").then(async (m2) => {
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await m2.zstd.init();
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return m2;
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}).then((m2) => m2.default)
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);
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addDecoder(50001, () => import("./webimage-
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addDecoder(50001, () => import("./webimage-CJom0KqV.js").then((m2) => m2.default));
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function copyNewSize(array2, width2, height2, samplesPerPixel = 1) {
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return new (Object.getPrototypeOf(array2)).constructor(width2 * height2 * samplesPerPixel);
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}
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@@ -252907,7 +252907,7 @@ class ErrorBoundary extends React__default.Component {
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}
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}
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const LazySpatialThree = React__default.lazy(async () => {
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const { SpatialWrapper: SpatialWrapper2 } = await import("./index-
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const { SpatialWrapper: SpatialWrapper2 } = await import("./index-CtqCS3uD.js");
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return { default: SpatialWrapper2 };
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});
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const SpatialThreeAdapter = React__default.forwardRef((props, ref2) => jsxRuntimeExports.jsx("div", { ref: ref2, style: { width: "100%", height: "100%" }, children: jsxRuntimeExports.jsx(ErrorBoundary, { children: jsxRuntimeExports.jsx(Suspense, { fallback: jsxRuntimeExports.jsx("div", { children: "Loading..." }), children: jsxRuntimeExports.jsx(LazySpatialThree, { ...props }) }) }) }));
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}
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register({ dataFetcher: ZarrMultivecDataFetcher_default, config: ZarrMultivecDataFetcher_default.config }, { pluginType: "dataFetcher" });
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const LazyHiGlassComponent = React__default.lazy(async () => {
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const { HiGlassComponent } = await import("./higlass-
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const { HiGlassComponent } = await import("./higlass-CDi6EYpj.js");
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return { default: HiGlassComponent };
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});
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const HG_SIZE = 800;
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const { classes: classes2 } = props;
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return jsxRuntimeExports.jsxs(jsxRuntimeExports.Fragment, { children: [jsxRuntimeExports.jsx(GlobalStyles$3, { styles: globalNeuroglancerCss }), jsxRuntimeExports.jsx(ScopedGlobalStyles, { styles: globalNeuroglancerStyles, parentClassName: classes2.neuroglancerWrapper })] });
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}
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const LazyReactNeuroglancer = React__default.lazy(() => import("./ReactNeuroglancer-
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const LazyReactNeuroglancer = React__default.lazy(() => import("./ReactNeuroglancer-ByNTvs8S.js"));
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function createWorker() {
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return new WorkerFactory();
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}
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throw new Error("Keys for encoding-type or encoding-version not found in AnnDataSource._loadString");
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}
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}
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const regex
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const regex = /^mod\/([^/]*)\/(.*)$/;
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function getModPrefix(arrPath) {
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if (arrPath) {
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const matches2 = arrPath.match(regex
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const matches2 = arrPath.match(regex);
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if (matches2 && matches2.length === 3) {
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return `mod/${matches2[1]}/`;
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}
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getModelMatrix() {
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const { coordinateTransformations: coordinateTransformationsFromOptions } = this.options;
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if ("multiscales" in this.vivLoader.metadata) {
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const { multiscales: [{ coordinateTransformations, axes }] } = this.vivLoader.metadata;
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const { multiscales: [{ datasets, coordinateTransformations: coordinateTransformationsFromFile, axes }] } = this.vivLoader.metadata;
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const ngffAxes = getNgffAxes(axes);
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const transformMatrixFromOptions = coordinateTransformationsToMatrix(coordinateTransformationsFromOptions, ngffAxes);
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const
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const normCoordinateTransformationsFromFile = normalizeCoordinateTransformations(coordinateTransformationsFromFile, datasets);
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const transformMatrixFromFile = coordinateTransformationsToMatrix(normCoordinateTransformationsFromFile, ngffAxes);
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const transformMatrix = transformMatrixFromFile.multiplyLeft(transformMatrixFromOptions);
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return transformMatrix;
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}
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}
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if (!this.locations) {
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const modelMatrix2 = await this.loadModelMatrix();
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this.locations = await this.dataSource.loadNumericForDims(getCoordsPath(path2), [0, 1]);
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let locations;
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return module2.readParquet;
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}
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const
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const elementRegex = /^shapes\/([^/]*)$/;
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const subElementRegex = /^shapes\/([^/]*)\/(.*)$/;
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function getShapesPrefix(arrPath) {
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const matches2 = arrPath.match(
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const matches2 = arrPath.match(subElementRegex);
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return `shapes/${elementMatches[1]}/`;
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}
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}
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}
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package/dist/index.js
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import { bL, bJ, bH, bK, bI, bG, bM } from "./index-
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import { bL, bJ, bH, bK, bI, bG, bM } from "./index-DC7r29QD.js";
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import { useComplexCoordination, useComplexCoordinationSecondary, useCoordination, useCoordinationScopes, useCoordinationScopesBy, useGridItemSize, useMultiCoordinationScopesNonNull, useMultiCoordinationScopesSecondaryNonNull, usePageModeView } from "@vitessce/vit-s";
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export {
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import { i as inflate_1 } from "./pako.esm-SxljTded.js";
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import { g as getDefaultExportFromCjs, aP as BaseDecoder, aQ as LercParameters, aR as LercAddCompression } from "./index-
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import { g as getDefaultExportFromCjs, aP as BaseDecoder, aQ as LercParameters, aR as LercAddCompression } from "./index-DC7r29QD.js";
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var LercDecode = { exports: {} };
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function requireLercDecode() {
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import { bA as MeshDistanceMaterial, bB as MeshDepthMaterial, bC as RGBADepthPacking, aB as UniformsUtils, bD as ShaderChunk, aw as InstancedBufferGeometry, av as Sphere, au as Box3, aH as BackSide, a9 as DoubleSide, ad as Mesh, as as FrontSide, aa as MeshBasicMaterial, i as Color, c as Vector3, k as Matrix4, d as Vector2, aJ as Matrix3, aD as Vector4, T as Texture, a1 as LinearFilter, bE as PlaneGeometry, f as BufferGeometry, ax as Float32BufferAttribute, bF as InstancedBufferAttribute } from "./index-
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import { bA as MeshDistanceMaterial, bB as MeshDepthMaterial, bC as RGBADepthPacking, aB as UniformsUtils, bD as ShaderChunk, aw as InstancedBufferGeometry, av as Sphere, au as Box3, aH as BackSide, a9 as DoubleSide, ad as Mesh, as as FrontSide, aa as MeshBasicMaterial, i as Color, c as Vector3, k as Matrix4, d as Vector2, aJ as Matrix3, aD as Vector4, T as Texture, a1 as LinearFilter, bE as PlaneGeometry, f as BufferGeometry, ax as Float32BufferAttribute, bF as InstancedBufferAttribute } from "./index-DC7r29QD.js";
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function workerBootstrap() {
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var modules = /* @__PURE__ */ Object.create(null);
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function registerModule(ref, callback) {
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package/package.json
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{
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"name": "@vitessce/all",
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"version": "3.6.
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"version": "3.6.7",
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"author": "HIDIVE Lab at HMS",
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"homepage": "http://vitessce.io",
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"repository": {
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"dependencies": {
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"zod": "^3.21.4",
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"@vitessce/styles": "3.6.
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"@vitessce/constants-internal": "3.6.
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"@vitessce/abstract": "3.6.
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"@vitessce/csv": "3.6.
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"@vitessce/description": "3.6.
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"@vitessce/feature-list": "3.6.
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"@vitessce/genomic-profiles": "3.6.
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"@vitessce/heatmap": "3.6.
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"@vitessce/glb": "3.6.
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"@vitessce/json": "3.6.
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"@vitessce/layer-controller": "3.6.
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"@vitessce/layer-controller-beta": "3.6.
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"@vitessce/link-controller": "3.6.
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"@vitessce/obs-sets-manager": "3.6.
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"@vitessce/ome-tiff": "3.6.
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"@vitessce/plugins": "3.6.
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"@vitessce/scatterplot-embedding": "3.6.
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"@vitessce/scatterplot-gating": "3.6.
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"@vitessce/schemas": "3.6.
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"@vitessce/spatial": "3.6.
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"@vitessce/statistical-plots": "3.6.
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"@vitessce/status": "3.6.
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"@vitessce/vit-s": "3.6.
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"@vitessce/zarr": "3.6.
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"@vitessce/globals": "3.6.
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"@vitessce/spatial-three": "3.6.
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"@vitessce/biomarker-select": "3.6.
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"@vitessce/neuroglancer": "3.6.
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"@vitessce/styles": "3.6.7",
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"@vitessce/constants-internal": "3.6.7",
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"@vitessce/abstract": "3.6.7",
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"@vitessce/csv": "3.6.7",
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"@vitessce/description": "3.6.7",
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"@vitessce/feature-list": "3.6.7",
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"@vitessce/genomic-profiles": "3.6.7",
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"@vitessce/heatmap": "3.6.7",
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"@vitessce/glb": "3.6.7",
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"@vitessce/json": "3.6.7",
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"@vitessce/layer-controller": "3.6.7",
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"@vitessce/layer-controller-beta": "3.6.7",
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"@vitessce/link-controller": "3.6.7",
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"@vitessce/obs-sets-manager": "3.6.7",
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"@vitessce/ome-tiff": "3.6.7",
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"@vitessce/plugins": "3.6.7",
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"@vitessce/scatterplot-embedding": "3.6.7",
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"@vitessce/scatterplot-gating": "3.6.7",
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"@vitessce/schemas": "3.6.7",
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"@vitessce/spatial": "3.6.7",
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"@vitessce/spatial-beta": "3.6.7",
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"@vitessce/statistical-plots": "3.6.7",
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"@vitessce/status": "3.6.7",
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"@vitessce/vit-s": "3.6.7",
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"@vitessce/zarr": "3.6.7",
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"@vitessce/globals": "3.6.7",
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"@vitessce/spatial-zarr": "3.6.7",
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"@vitessce/spatial-three": "3.6.7",
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"@vitessce/biomarker-select": "3.6.7",
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"@vitessce/neuroglancer": "3.6.7"
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},
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"devDependencies": {
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"@types/react": "^18.0.28",
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