@vitessce/all 3.6.12 → 3.6.13

package/dist/{ReactNeuroglancer-ClJTnYLU.js → ReactNeuroglancer-D4Xivd2K.js}

@@ -1,4 +1,4 @@
-import { g as getDefaultExportFromCjs, aV as requireAssign, aW as require_export, aX as require_core, aY as require_fails, aZ as require_toObject, a_ as require_objectKeys, a$ as require_cof, b0 as require_wks, b1 as require_iterators, b2 as requireWeb_dom_iterable, b3 as requireEs6_string_iterator, b4 as require_anObject, b5 as require_hide, b6 as require_ctx, b7 as require_toLength, b8 as require_global, b9 as require_objectDp, ba as require_descriptors, bb as require_isObject, bc as require_objectCreate, bd as require_iterDefine, be as require_iterStep, bf as require_meta, bg as require_isArray, bh as require_iobject, bi as require_setToStringTag, bj as require_aFunction, bk as requireIterator, bl as require_propertyDesc, aS as commonjsGlobal, bm as requireEs6_symbol, bn as requireDefineProperty, bo as require_toIobject, bp as require_objectGopd, bq as require_html, br as require_domCreate, bs as require_library, bt as requireSymbol, bu as require_objectPie, bv as require_has, bw as require_redefine, bx as require_objectAssign, by as getAugmentedNamespace, bz as requirePropTypes, aI as jsxRuntimeExports } from "./index-C4jXHZ0b.js";
+import { g as getDefaultExportFromCjs, aV as requireAssign, aW as require_export, aX as require_core, aY as require_fails, aZ as require_toObject, a_ as require_objectKeys, a$ as require_cof, b0 as require_wks, b1 as require_iterators, b2 as requireWeb_dom_iterable, b3 as requireEs6_string_iterator, b4 as require_anObject, b5 as require_hide, b6 as require_ctx, b7 as require_toLength, b8 as require_global, b9 as require_objectDp, ba as require_descriptors, bb as require_isObject, bc as require_objectCreate, bd as require_iterDefine, be as require_iterStep, bf as require_meta, bg as require_isArray, bh as require_iobject, bi as require_setToStringTag, bj as require_aFunction, bk as requireIterator, bl as require_propertyDesc, aS as commonjsGlobal, bm as requireEs6_symbol, bn as requireDefineProperty, bo as require_toIobject, bp as require_objectGopd, bq as require_html, br as require_domCreate, bs as require_library, bt as requireSymbol, bu as require_objectPie, bv as require_has, bw as require_redefine, bx as require_objectAssign, by as getAugmentedNamespace, bz as requirePropTypes, aI as jsxRuntimeExports } from "./index-DcZv7teI.js";
 import React__default from "react";
 var lib = {};
 var assignExports = requireAssign();

package/dist/{deflate-m7-w-RAu.js → deflate-B2CAUF5S.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-SxljTded.js";
-import { aP as BaseDecoder } from "./index-C4jXHZ0b.js";
+import { aP as BaseDecoder } from "./index-DcZv7teI.js";
 class DeflateDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return inflate_1(new Uint8Array(buffer)).buffer;

package/dist/{higlass-BzR8ZcgQ.js → higlass-DNEa7gM7.js}

@@ -1,7 +1,7 @@
 import * as React$7 from "react";
 import React__default, { isValidElement, PureComponent, Component, createElement, createContext, createRef } from "react";
 import ReactDOM__default, { findDOMNode as findDOMNode$1 } from "react-dom";
-import { aS as commonjsGlobal$1, aT as requireObjectAssign, g as getDefaultExportFromCjs$1, aU as earcut } from "./index-C4jXHZ0b.js";
+import { aS as commonjsGlobal$1, aT as requireObjectAssign, g as getDefaultExportFromCjs$1, aU as earcut } from "./index-DcZv7teI.js";
 var promise = {};
 var hasRequiredPromise;
 function requirePromise() {

package/dist/{index-D1PvvaWO.js → index-DG6RbZza.js}

@@ -1,4 +1,4 @@
-import { g as getDefaultExportFromCjs, R as Raycaster, O as OrthographicCamera, P as PerspectiveCamera, S as Scene, a as PCFSoftShadowMap, V as VSMShadowMap, b as PCFShadowMap, B as BasicShadowMap, N as NoToneMapping, A as ACESFilmicToneMapping, c as Vector3, d as Vector2, C as Clock, W as WebGLRenderer, e as Camera, f as BufferGeometry, M as Material, L as Layers, T as Texture, h as RGBAFormat, U as UnsignedByteType, i as Color, _ as _extends, j as THREE, G as Group, k as Matrix4, l as TrianglesDrawMode, m as TriangleFanDrawMode, n as TriangleStripDrawMode, o as REVISION, E as EventDispatcher, p as MOUSE, q as TOUCH, r as Spherical, Q as Quaternion, s as Ray$1, t as Plane, u as Loader, v as LoaderUtils, F as FileLoader, w as MeshPhysicalMaterial, x as SpotLight, y as PointLight, D as DirectionalLight, I as InstancedMesh, z as Object3D, H as TextureLoader, J as ImageBitmapLoader, K as BufferAttribute, X as InterleavedBuffer, Y as LinearMipmapLinearFilter, Z as NearestMipmapLinearFilter, $ as LinearMipmapNearestFilter, a0 as NearestMipmapNearestFilter, a1 as LinearFilter, a2 as NearestFilter, a3 as RepeatWrapping, a4 as MirroredRepeatWrapping, a5 as ClampToEdgeWrapping, a6 as PointsMaterial, a7 as LineBasicMaterial, a8 as MeshStandardMaterial, a9 as DoubleSide, aa as MeshBasicMaterial, ab as PropertyBinding, ac as SkinnedMesh, ad as Mesh, ae as LineSegments, af as Line$1, ag as LineLoop, ah as Points, ai as MathUtils, aj as Skeleton, ak as InterpolateDiscrete, al as InterpolateLinear, am as AnimationClip, an as Bone, ao as InterleavedBufferAttribute, ap as VectorKeyframeTrack, aq as QuaternionKeyframeTrack, ar as NumberKeyframeTrack, as as FrontSide, at as Interpolant, au as Box3, av as Sphere, aw as InstancedBufferGeometry, ax as Float32BufferAttribute, ay as InstancedInterleavedBuffer, az as WireframeGeometry, aA as ShaderMaterial, aB as UniformsUtils, aC as UniformsLib, aD as Vector4, aE as Line3, aF as SphereGeometry, aG as Triangle, aH as BackSide, aI as jsxRuntimeExports, aJ as Matrix3, aK as CoordinationType, aL as Data3DTexture, aM as RedFormat, aN as FloatType, aO as getImageSize } from "./index-C4jXHZ0b.js";
+import { g as getDefaultExportFromCjs, R as Raycaster, O as OrthographicCamera, P as PerspectiveCamera, S as Scene, a as PCFSoftShadowMap, V as VSMShadowMap, b as PCFShadowMap, B as BasicShadowMap, N as NoToneMapping, A as ACESFilmicToneMapping, c as Vector3, d as Vector2, C as Clock, W as WebGLRenderer, e as Camera, f as BufferGeometry, M as Material, L as Layers, T as Texture, h as RGBAFormat, U as UnsignedByteType, i as Color, _ as _extends, j as THREE, G as Group, k as Matrix4, l as TrianglesDrawMode, m as TriangleFanDrawMode, n as TriangleStripDrawMode, o as REVISION, E as EventDispatcher, p as MOUSE, q as TOUCH, r as Spherical, Q as Quaternion, s as Ray$1, t as Plane, u as Loader, v as LoaderUtils, F as FileLoader, w as MeshPhysicalMaterial, x as SpotLight, y as PointLight, D as DirectionalLight, I as InstancedMesh, z as Object3D, H as TextureLoader, J as ImageBitmapLoader, K as BufferAttribute, X as InterleavedBuffer, Y as LinearMipmapLinearFilter, Z as NearestMipmapLinearFilter, $ as LinearMipmapNearestFilter, a0 as NearestMipmapNearestFilter, a1 as LinearFilter, a2 as NearestFilter, a3 as RepeatWrapping, a4 as MirroredRepeatWrapping, a5 as ClampToEdgeWrapping, a6 as PointsMaterial, a7 as LineBasicMaterial, a8 as MeshStandardMaterial, a9 as DoubleSide, aa as MeshBasicMaterial, ab as PropertyBinding, ac as SkinnedMesh, ad as Mesh, ae as LineSegments, af as Line$1, ag as LineLoop, ah as Points, ai as MathUtils, aj as Skeleton, ak as InterpolateDiscrete, al as InterpolateLinear, am as AnimationClip, an as Bone, ao as InterleavedBufferAttribute, ap as VectorKeyframeTrack, aq as QuaternionKeyframeTrack, ar as NumberKeyframeTrack, as as FrontSide, at as Interpolant, au as Box3, av as Sphere, aw as InstancedBufferGeometry, ax as Float32BufferAttribute, ay as InstancedInterleavedBuffer, az as WireframeGeometry, aA as ShaderMaterial, aB as UniformsUtils, aC as UniformsLib, aD as Vector4, aE as Line3, aF as SphereGeometry, aG as Triangle, aH as BackSide, aI as jsxRuntimeExports, aJ as Matrix3, aK as CoordinationType, aL as Data3DTexture, aM as RedFormat, aN as FloatType, aO as getImageSize } from "./index-DcZv7teI.js";
 import * as React from "react";
 import React__default, { useReducer, useRef, useEffect, useLayoutEffect, useDebugValue, useState, useMemo, forwardRef } from "react";
 var constants = { exports: {} };
@@ -23637,7 +23637,7 @@ const Text = /* @__PURE__ */ React.forwardRef(({
   const {
     Text: TextMeshImpl,
     preloadFont
-  } = suspend(async () => import("./troika-three-text.esm-DxxlvoUc.js"), []);
+  } = suspend(async () => import("./troika-three-text.esm-DLsbwboO.js"), []);
   const invalidate2 = useThree(({
     invalidate: invalidate3
   }) => invalidate3);

package/dist/{index-C4jXHZ0b.js → index-DcZv7teI.js}

@@ -209669,22 +209669,22 @@ async function getDecoder(fileDirectory) {
   const Decoder = await importFn();
   return new Decoder(fileDirectory);
 }
-addDecoder([void 0, 1], () => import("./raw-3qJospDt.js").then((m2) => m2.default));
-addDecoder(5, () => import("./lzw-BwTxxip3.js").then((m2) => m2.default));
+addDecoder([void 0, 1], () => import("./raw-DqALOEt-.js").then((m2) => m2.default));
+addDecoder(5, () => import("./lzw-kKlj6Pam.js").then((m2) => m2.default));
 addDecoder(6, () => {
   throw new Error("old style JPEG compression is not supported.");
 });
-addDecoder(7, () => import("./jpeg-Co9uTOBm.js").then((m2) => m2.default));
-addDecoder([8, 32946], () => import("./deflate-m7-w-RAu.js").then((m2) => m2.default));
-addDecoder(32773, () => import("./packbits-1Z8M_gwl.js").then((m2) => m2.default));
+addDecoder(7, () => import("./jpeg-DY_DkYi3.js").then((m2) => m2.default));
+addDecoder([8, 32946], () => import("./deflate-B2CAUF5S.js").then((m2) => m2.default));
+addDecoder(32773, () => import("./packbits-DzhxlAeC.js").then((m2) => m2.default));
 addDecoder(
   34887,
-  () => import("./lerc-CAmIGmmt.js").then(async (m2) => {
+  () => import("./lerc-Bz6jtDu9.js").then(async (m2) => {
     await m2.zstd.init();
     return m2;
   }).then((m2) => m2.default)
 );
-addDecoder(50001, () => import("./webimage-BF_dP3bA.js").then((m2) => m2.default));
+addDecoder(50001, () => import("./webimage-B46sb8Pc.js").then((m2) => m2.default));
 function copyNewSize(array2, width2, height2, samplesPerPixel = 1) {
   return new (Object.getPrototypeOf(array2)).constructor(width2 * height2 * samplesPerPixel);
 }
@@ -253560,7 +253560,7 @@ class ErrorBoundary extends React__default.Component {
   }
 }
 const LazySpatialThree = React__default.lazy(async () => {
-  const { SpatialWrapper: SpatialWrapper2 } = await import("./index-D1PvvaWO.js");
+  const { SpatialWrapper: SpatialWrapper2 } = await import("./index-DG6RbZza.js");
   return { default: SpatialWrapper2 };
 });
 const SpatialThreeAdapter = React__default.forwardRef((props, ref2) => jsxRuntimeExports.jsx("div", { ref: ref2, style: { width: "100%", height: "100%" }, children: jsxRuntimeExports.jsx(ErrorBoundary, { children: jsxRuntimeExports.jsx(Suspense, { fallback: jsxRuntimeExports.jsx("div", { children: "Loading..." }), children: jsxRuntimeExports.jsx(LazySpatialThree, { ...props }) }) }) }));
@@ -265401,7 +265401,7 @@ function HiglassGlobalStyles(props) {
 }
 register({ dataFetcher: ZarrMultivecDataFetcher_default, config: ZarrMultivecDataFetcher_default.config }, { pluginType: "dataFetcher" });
 const LazyHiGlassComponent = React__default.lazy(async () => {
-  const { HiGlassComponent } = await import("./higlass-BzR8ZcgQ.js");
+  const { HiGlassComponent } = await import("./higlass-DNEa7gM7.js");
   return { default: HiGlassComponent };
 });
 const HG_SIZE = 800;
@@ -268345,7 +268345,7 @@ function NeuroglancerGlobalStyles(props) {
   const { classes: classes2 } = props;
   return jsxRuntimeExports.jsxs(jsxRuntimeExports.Fragment, { children: [jsxRuntimeExports.jsx(GlobalStyles$3, { styles: globalNeuroglancerCss }), jsxRuntimeExports.jsx(ScopedGlobalStyles, { styles: globalNeuroglancerStyles, parentClassName: classes2.neuroglancerWrapper })] });
 }
-const LazyReactNeuroglancer = React__default.lazy(() => import("./ReactNeuroglancer-ClJTnYLU.js"));
+const LazyReactNeuroglancer = React__default.lazy(() => import("./ReactNeuroglancer-D4Xivd2K.js"));
 function createWorker() {
   return new WorkerFactory();
 }
@@ -377963,6 +377963,9 @@ function makeFileType(name2, dataType, dataLoaderClass, dataSourceClass, options
 }
 function makeZarrFileTypes(name2, dataType, dataLoaderClass, dataSourceClass, optionsSchema) {
   const altFileTypes = ALT_ZARR_STORE_TYPES[name2];
+  if (!altFileTypes) {
+    throw new Error(`No alternative file types found for Zarr-based fileType ${name2}`);
+  }
   return [
     new PluginFileType(name2, dataType, dataLoaderClass, dataSourceClass, optionsSchema),
     ...Object.entries(altFileTypes).map(([key2, fileType]) => {
@@ -378051,15 +378054,15 @@ const baseFileTypes = [
   ...makeZarrFileTypes(FileType$1.OBS_SEGMENTATIONS_OME_ZARR, DataType$3.OBS_SEGMENTATIONS, OmeZarrAsObsSegmentationsLoader, ZarrDataSource, obsSegmentationsOmeZarrSchema),
   makeFileType(FileType$1.OBS_SEGMENTATIONS_OME_TIFF, DataType$3.OBS_SEGMENTATIONS, OmeTiffAsObsSegmentationsLoader, OmeTiffSource, obsSegmentationsOmeTiffSchema),
   // SpatialData file types
-  makeFileType(FileType$1.IMAGE_SPATIALDATA_ZARR, DataType$3.IMAGE, SpatialDataImageLoader, ZarrDataSource, imageSpatialdataSchema),
-  makeFileType(FileType$1.LABELS_SPATIALDATA_ZARR, DataType$3.OBS_SEGMENTATIONS, SpatialDataLabelsLoader, ZarrDataSource, obsSegmentationsSpatialdataSchema),
-  makeFileType(FileType$1.SHAPES_SPATIALDATA_ZARR, DataType$3.OBS_SEGMENTATIONS, SpatialDataObsSegmentationsLoader, SpatialDataShapesSource, obsSegmentationsSpatialdataSchema),
-  makeFileType(FileType$1.OBS_SPOTS_SPATIALDATA_ZARR, DataType$3.OBS_SPOTS, SpatialDataObsSpotsLoader, SpatialDataShapesSource, obsSpotsSpatialdataSchema),
-  makeFileType(FileType$1.OBS_POINTS_SPATIALDATA_ZARR, DataType$3.OBS_POINTS, SpatialDataObsPointsLoader, SpatialDataPointsSource, obsPointsSpatialdataSchema),
-  makeFileType(FileType$1.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR, DataType$3.OBS_FEATURE_MATRIX, ObsFeatureMatrixAnndataLoader, SpatialDataTableSource, obsFeatureMatrixSpatialdataSchema),
-  makeFileType(FileType$1.OBS_SETS_SPATIALDATA_ZARR, DataType$3.OBS_SETS, SpatialDataObsSetsLoader, SpatialDataTableSource, obsSetsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType$1.IMAGE_SPATIALDATA_ZARR, DataType$3.IMAGE, SpatialDataImageLoader, ZarrDataSource, imageSpatialdataSchema),
+  ...makeZarrFileTypes(FileType$1.LABELS_SPATIALDATA_ZARR, DataType$3.OBS_SEGMENTATIONS, SpatialDataLabelsLoader, ZarrDataSource, obsSegmentationsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType$1.SHAPES_SPATIALDATA_ZARR, DataType$3.OBS_SEGMENTATIONS, SpatialDataObsSegmentationsLoader, SpatialDataShapesSource, obsSegmentationsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType$1.OBS_SPOTS_SPATIALDATA_ZARR, DataType$3.OBS_SPOTS, SpatialDataObsSpotsLoader, SpatialDataShapesSource, obsSpotsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType$1.OBS_POINTS_SPATIALDATA_ZARR, DataType$3.OBS_POINTS, SpatialDataObsPointsLoader, SpatialDataPointsSource, obsPointsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType$1.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR, DataType$3.OBS_FEATURE_MATRIX, ObsFeatureMatrixAnndataLoader, SpatialDataTableSource, obsFeatureMatrixSpatialdataSchema),
+  ...makeZarrFileTypes(FileType$1.OBS_SETS_SPATIALDATA_ZARR, DataType$3.OBS_SETS, SpatialDataObsSetsLoader, SpatialDataTableSource, obsSetsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType$1.FEATURE_LABELS_SPATIALDATA_ZARR, DataType$3.FEATURE_LABELS, FeatureLabelsAnndataLoader, SpatialDataTableSource, featureLabelsAnndataSchema),
   makeFileType(FileType$1.OBS_SEGMENTATIONS_GLB, DataType$3.OBS_SEGMENTATIONS, GlbDataLoader, GlbSource, meshGlbSchema),
-  makeFileType(FileType$1.FEATURE_LABELS_SPATIALDATA_ZARR, DataType$3.FEATURE_LABELS, FeatureLabelsAnndataLoader, SpatialDataTableSource, featureLabelsAnndataSchema),
   // All legacy file types
   makeFileType(FileType$1.OBS_FEATURE_MATRIX_EXPRESSION_MATRIX_ZARR, DataType$3.OBS_FEATURE_MATRIX, MatrixZarrAsObsFeatureMatrixLoader, ZarrDataSource, z.null()),
   makeFileType(FileType$1.IMAGE_RASTER_JSON, DataType$3.IMAGE, RasterJsonAsImageLoader, JsonSource, rasterJsonSchema),

package/dist/index.js

@@ -1,4 +1,4 @@
-import { bL, bJ, bH, bK, bI, bG, bM } from "./index-C4jXHZ0b.js";
+import { bL, bJ, bH, bK, bI, bG, bM } from "./index-DcZv7teI.js";
 import { useComplexCoordination, useComplexCoordinationSecondary, useCoordination, useCoordinationScopes, useCoordinationScopesBy, useGridItemSize, useMultiCoordinationScopesNonNull, useMultiCoordinationScopesSecondaryNonNull, usePageModeView } from "@vitessce/vit-s";
 export {
   bL as PluginAsyncFunction,

package/dist/{jpeg-Co9uTOBm.js → jpeg-DY_DkYi3.js}

@@ -1,4 +1,4 @@
-import { aP as BaseDecoder } from "./index-C4jXHZ0b.js";
+import { aP as BaseDecoder } from "./index-DcZv7teI.js";
 const dctZigZag = new Int32Array([
   0,
   1,

package/dist/{lerc-CAmIGmmt.js → lerc-Bz6jtDu9.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-SxljTded.js";
-import { g as getDefaultExportFromCjs, aP as BaseDecoder, aQ as LercParameters, aR as LercAddCompression } from "./index-C4jXHZ0b.js";
+import { g as getDefaultExportFromCjs, aP as BaseDecoder, aQ as LercParameters, aR as LercAddCompression } from "./index-DcZv7teI.js";
 var LercDecode = { exports: {} };
 var hasRequiredLercDecode;
 function requireLercDecode() {

package/dist/{lzw-BwTxxip3.js → lzw-kKlj6Pam.js}

@@ -1,4 +1,4 @@
-import { aP as BaseDecoder } from "./index-C4jXHZ0b.js";
+import { aP as BaseDecoder } from "./index-DcZv7teI.js";
 const MIN_BITS = 9;
 const CLEAR_CODE = 256;
 const EOI_CODE = 257;

package/dist/{packbits-1Z8M_gwl.js → packbits-DzhxlAeC.js}

@@ -1,4 +1,4 @@
-import { aP as BaseDecoder } from "./index-C4jXHZ0b.js";
+import { aP as BaseDecoder } from "./index-DcZv7teI.js";
 class PackbitsDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     const dataView = new DataView(buffer);

package/dist/{raw-3qJospDt.js → raw-DqALOEt-.js}

@@ -1,4 +1,4 @@
-import { aP as BaseDecoder } from "./index-C4jXHZ0b.js";
+import { aP as BaseDecoder } from "./index-DcZv7teI.js";
 class RawDecoder extends BaseDecoder {
   decodeBlock(buffer) {
     return buffer;

package/dist/{troika-three-text.esm-DxxlvoUc.js → troika-three-text.esm-DLsbwboO.js}

@@ -1,4 +1,4 @@
-import { bA as MeshDistanceMaterial, bB as MeshDepthMaterial, bC as RGBADepthPacking, aB as UniformsUtils, bD as ShaderChunk, aw as InstancedBufferGeometry, av as Sphere, au as Box3, aH as BackSide, a9 as DoubleSide, ad as Mesh, as as FrontSide, aa as MeshBasicMaterial, i as Color, c as Vector3, k as Matrix4, d as Vector2, aJ as Matrix3, aD as Vector4, T as Texture, a1 as LinearFilter, bE as PlaneGeometry, f as BufferGeometry, ax as Float32BufferAttribute, bF as InstancedBufferAttribute } from "./index-C4jXHZ0b.js";
+import { bA as MeshDistanceMaterial, bB as MeshDepthMaterial, bC as RGBADepthPacking, aB as UniformsUtils, bD as ShaderChunk, aw as InstancedBufferGeometry, av as Sphere, au as Box3, aH as BackSide, a9 as DoubleSide, ad as Mesh, as as FrontSide, aa as MeshBasicMaterial, i as Color, c as Vector3, k as Matrix4, d as Vector2, aJ as Matrix3, aD as Vector4, T as Texture, a1 as LinearFilter, bE as PlaneGeometry, f as BufferGeometry, ax as Float32BufferAttribute, bF as InstancedBufferAttribute } from "./index-DcZv7teI.js";
 function workerBootstrap() {
   var modules = /* @__PURE__ */ Object.create(null);
   function registerModule(ref, callback) {

package/dist/{webimage-BF_dP3bA.js → webimage-B46sb8Pc.js}

@@ -1,4 +1,4 @@
-import { aP as BaseDecoder } from "./index-C4jXHZ0b.js";
+import { aP as BaseDecoder } from "./index-DcZv7teI.js";
 class WebImageDecoder extends BaseDecoder {
   constructor() {
     super();

package/dist-tsc/base-plugins.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"base-plugins.d.ts","sourceRoot":"","sources":["../src/base-plugins.ts"],"names":[],"mappings":"AAWA,OAAO,EACL,cAAc,EACd,mBAAmB,EACnB,cAAc,EACd,sBAAsB,EACtB,mBAAmB,EACpB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,UAAU,EACV,UAAU,EACX,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EACL,CAAC,EAmDF,MAAM,mBAAmB,CAAC;AA0K3B,eAAO,MAAM,aAAa,kBA8BzB,CAAC;AAEF,eAAO,MAAM,aAAa,wDAyEzB,CAAC;AAEF,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;yBAuFR,CAAC;gCAAsD,CAAC;;;yBACF,CAAC;gCAC1B,CAAC;;;;;;;;;;;;;;;;iBAYjD,CAAF;;;;iBAEkG,CAAC;;;;;;;YAOnG,CAAC;;;YAEC,CAAC;;;;;;;YAS+B,CAAC;;;YAAmE,CAAC;;;;;;;YAKrG,CAAH;;;YAEiB,CAAC;;;;;;;;;;;;;;YAcD,CAAC;;;YAAmE,CAAC;;;;;;;;YAMgB,CAAC;;;;YAEhE,CAAC;;;;;;;;;;;;;;;;;;;;;;;;yBAyBvB,CAAC;gCAEb,CAAC;;;;;;;;iBASH,CAAF;;;;YAGoD,CAAC;;;;YACiB,CAAC;;;;YAEvE,CAAC;;;;;;;YACyE,CAAC;;;;YACD,CAAC;;;;;;;;;;;;;;;;;;;;yBAKnB,CAAC;gCAC5C,CAAC;;;;;;;;iBAE+B,CAAC;;;;YACA,CAAC;;;;YACM,CAAC;;;;YACW,CAAC;;;;;;;YACgC,CAAC;;;;YAC7B,CAAC;;;;;;;;;;;wBAgEg/C,CAAC;;;wBAA6E,CAAC;;;;;;;;iBAAwR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;iBAAiR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;;;yBAAkZ,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;yBAA8E,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;;;;;iBAAgR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;;;;;qBAAygB,CAAC;;;;qBAA2J,CAAC;;;;;;qBAAsN,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;qBAA0K,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;;wBAAwL,CAAC;;;;iBAAyG,CAAC;wBAA8C,CAAC;;;;iBAAkG,CAAC;wBAA8C,CAAC;;;;yBAAiH,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;iBAAiG,CAAC;wBAA8C,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;;wBAAqJ,CAAC;;;;iBAAyG,CAAC;wBAA8C,CAAC;;;;iBAAkG,CAAC;wBAA8C,CAAC;;;;yBAAiH,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;iBAAiG,CAAC;wBAA8C,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;sBAzhBzlO,CAAC;;;;;qBAGkB,CAAC;qBAC5B,CAAC;;;;;;;;;qBAGyC,CAAC;6BACvC,CAAC;;sBAEjB,CAAC;;;;;qBAQvB,CAAC;qBACK,CAAC;;;;;;;;;qBAYR,CAAA;6BAEC,CAAC;;;;;;;;;;;;;kBAwBQ,CAAC;mBACQ,CAAC;gBAEZ,CAAC;gBACa,CAAC;uBAEV,CAAC;iBACM,CAAC;oBAER,CAAC;oBAEd,CAAD;qBACgB,CAAC;;kBAEX,CAAC;mBACS,CAAC;gBAIhB,CAAA;gBACoB,CAAC;uBAErB,CAAA;iBAGI,CAAC;oBAEgB,CAAC;oBAEV,CAAC;qBAEV,CAAC;;;;;;gBAKS,CAAC;sBACX,CAAC;;;;;qBAWH,CAAC;qBAGD,CAAC;;;;;;;;;qBAUW,CAAC;6BAEM,CAAC;;mBAGN,CAAC;kBACJ,CAAC;mBACI,CAAC;gBAGZ,CAAC;gBACQ,CAAC;uBAGhB,CAAA;iBACgB,CAAC;oBAEE,CAAC;oBAEX,CAAC;qBACZ,CAAA;;;;;;gBACiF,CAAC;sBAG5E,CAAC;;;;;qBAC2B,CAAA;qBAA4C,CAAC;;;;;;;;;qBAGqD,CAAC;6BACnI,CAAA;;mBAEE,CAAC;kBAAsB,CAAC;mBAAyC,CAAC;gBAClD,CAAC;gBAAsC,CAAC;uBAClB,CAAC;iBACnC,CAAD;oBACU,CAAC;oBACgB,CAAC;qBAA2C,CAAC;;;;;;;;;gBAQ7E,CAAA;sBAA0B,CAAC;;;;;qBAGC,CAAC;qBACT,CAAC;;;;;;;;;qBAIF,CAAC;6BAAoD,CAAC;;mBAElE,CAAC;kBAAsB,CAAC;mBAAyC,CAAC;gBAC3C,CAAC;gBAC9B,CAAC;uBAA6C,CAAC;iBAC1C,CAAC;oBAA0C,CAAC;oBAC1B,CAAA;qBACH,CAAC;;;;;;;;;;;gBAIY,CAAC;sBAA0B,CAAC;;;;;qBAIrD,CAAC;qBAA4C,CAAC;;;;;;;;;qBAGL,CAAC;6BAGjD,CAAC;;mBAES,CAAC;kBAAuB,CAAA;mBAAyC,CAAC;gBACtD,CAAC;gBAAsC,CAAC;uBAA6C,CAAC;iBACtF,CAAC;oBAA0C,CAAC;oBACnE,CAAC;qBAA2C,CAAC;;;;;;;;;;;;;;OAwF/C,CAAC;AAIF,eAAO,MAAM,qBAAqB;;;;;;;;aAjWtB,CAAC;cAGX,CAAD;eAES,CAAC;;;aAIH,CAAC;cAEP,CAAF;eACgB,CAAC;;;;;;;;;;;;;;;;;;;aAgCd,CAAC;cACQ,CAAC;eAEH,CAAC;;;;;;;;;;;;;;;;;;;aAmBF,CAAA;cAAsC,CAAC;eACf,CAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;aAnErB,CAAC;cAGX,CAAD;eAES,CAAC;;;aAIH,CAAC;cAEP,CAAF;eACgB,CAAC;;;;;;;;;;;;;;;;;;;aAgCd,CAAC;cACQ,CAAC;eAEH,CAAC;;;;;;;;;;;;;;;;;;;aAmBF,CAAA;cAAsC,CAAC;eACf,CAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;kzBA+gBhC,CAAC;AAEF,eAAO,MAAM,kBAAkB,uBAK9B,CAAC"}
+{"version":3,"file":"base-plugins.d.ts","sourceRoot":"","sources":["../src/base-plugins.ts"],"names":[],"mappings":"AAWA,OAAO,EACL,cAAc,EACd,mBAAmB,EACnB,cAAc,EACd,sBAAsB,EACtB,mBAAmB,EACpB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,UAAU,EACV,UAAU,EACX,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EACL,CAAC,EAmDF,MAAM,mBAAmB,CAAC;AA8K3B,eAAO,MAAM,aAAa,kBA8BzB,CAAC;AAEF,eAAO,MAAM,aAAa,wDAyEzB,CAAC;AAEF,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;yBAiFG,CAAC;gCAGhC,CAAC;;;yBAEF,CAAF;gCAAsD,CAAC;;;;;;;;;;;;;;;;iBAS3C,CAAC;;;;iBAEkG,CAAC;;;;;;;YAMV,CAAC;;;YAEnF,CAAC;;;;;;;YAOjB,CAAH;;;YAGU,CAAC;;;;;;;YAM2F,CAAC;;;YAE9C,CAAC;;;;;;;;;;;;;;YAUvD,CAAD;;;YAEM,CAAC;;;;;;;;YAOwH,CAAC;;;;YAI5H,CAAC;;;;;;;;;;;;;;;;;;;;;;;;yBAmBJ,CAAC;gCAEK,CAAC;;;;;;;;iBAUN,CAAC;;;;YAGwB,CAAC;;;;YAK1B,CAAC;;;;YAIO,CAAC;;;;;;;YAEQ,CAAC;;;;YACQ,CAAC;;;;;;;;;;;;;;;;;;;;yBAKvB,CAAC;gCAAsD,CAAC;;;;;;;;iBAGnD,CAAC;;;;YACb,CAAD;;;;YACC,CAAC;;;;YACI,CAAC;;;;;;;YAC2E,CAAC;;;;YACY,CAAC;;;;;;;;;;;wBAkE4uC,CAAC;;;wBAA6E,CAAC;;;;;;;;iBAAwR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;iBAAiR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;;;yBAAkZ,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;yBAA8E,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;;;;;iBAAgR,CAAC;wBAA8C,CAAC;;;iBAAsE,CAAC;wBAA8C,CAAC;;;;;;;;;;;;qBAAygB,CAAC;;;;qBAA2J,CAAC;;;;;;qBAAsN,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;qBAA0K,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;;wBAAwL,CAAC;;;;iBAAyG,CAAC;wBAA8C,CAAC;;;;iBAAkG,CAAC;wBAA8C,CAAC;;;;yBAAiH,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;iBAAiG,CAAC;wBAA8C,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;;wBAAqJ,CAAC;;;;iBAAyG,CAAC;wBAA8C,CAAC;;;;iBAAkG,CAAC;wBAA8C,CAAC;;;;yBAAiH,CAAC;gCAAsD,CAAC;cAAoC,CAAC;wBAA8C,CAAC;;;;iBAAiG,CAAC;wBAA8C,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;sBA7hB72N,CAAC;;;;;qBAGkB,CAAC;qBAC5B,CAAC;;;;;;;;;qBAGyC,CAAC;6BACvC,CAAC;;sBAEjB,CAAC;;;;;qBAQvB,CAAC;qBACK,CAAC;;;;;;;;;qBAYR,CAAA;6BAEC,CAAC;;;;;;;;;;;;;kBAwBQ,CAAC;mBACQ,CAAC;gBAEZ,CAAC;gBACa,CAAC;uBAEV,CAAC;iBACM,CAAC;oBAER,CAAC;oBAEd,CAAD;qBACgB,CAAC;;kBAEX,CAAC;mBACS,CAAC;gBAIhB,CAAA;gBACoB,CAAC;uBAErB,CAAA;iBAGI,CAAC;oBAEgB,CAAC;oBAEV,CAAC;qBAEV,CAAC;;;;;;gBAKS,CAAC;sBACX,CAAC;;;;;qBAWH,CAAC;qBAGD,CAAC;;;;;;;;;qBAUW,CAAC;6BAEM,CAAC;;mBAGN,CAAC;kBACJ,CAAC;mBACI,CAAC;gBAGZ,CAAC;gBACQ,CAAC;uBAGhB,CAAA;iBACgB,CAAC;oBAEE,CAAC;oBAEX,CAAC;qBACZ,CAAA;;;;;;gBACiF,CAAC;sBAG5E,CAAC;;;;;qBAC2B,CAAA;qBAA4C,CAAC;;;;;;;;;qBAIJ,CAAC;6BAAoD,CAAC;;mBACxH,CAAC;kBAAsB,CAAC;mBAE7B,CAAH;gBAAoD,CAAA;gBAEnD,CAAF;uBACkC,CAAC;iBAAuC,CAAC;oBAC3D,CAAC;oBAA0C,CAAC;qBACpB,CAAC;;;;;;;;;gBAG+E,CAAC;sBAKhH,CAAC;;;;;qBAGgD,CAAC;qBAC1B,CAAC;;;;;;;;;qBAIA,CAAC;6BACD,CAAC;;mBACE,CAAC;kBAAsB,CAAC;mBAC7B,CAAC;gBAC5B,CAAC;gBAAsC,CAAC;uBACN,CAAC;iBAAuC,CAAC;oBACpD,CAAC;oBAC1B,CAAC;qBAA2C,CAAC;;;;;;;;;;;gBAK9C,CAAA;sBAA0B,CAAC;;;;;qBAGN,CAAC;qBACtB,CAAD;;;;;;;;;qBAGqD,CAAC;6BAC9B,CAAC;;mBAAgE,CAAC;kBACtE,CAAC;mBAAyC,CAAC;gBAGlD,CAAC;gBACO,CAAC;uBACqB,CAAC;iBAAuC,CAAC;oBAC/D,CAAC;oBAA0C,CAAC;qBAA2C,CAAC;;;;;;;;;;;;;;OA0F7G,CAAC;AAIF,eAAO,MAAM,qBAAqB;;;;;;;;aArWtB,CAAC;cAGX,CAAD;eAES,CAAC;;;aAIH,CAAC;cAEP,CAAF;eACgB,CAAC;;;;;;;;;;;;;;;;;;;aAgCd,CAAC;cACQ,CAAC;eAEH,CAAC;;;;;;;;;;;;;;;;;;;aAmBF,CAAA;cAAsC,CAAC;eACf,CAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;aAnErB,CAAC;cAGX,CAAD;eAES,CAAC;;;aAIH,CAAC;cAEP,CAAF;eACgB,CAAC;;;;;;;;;;;;;;;;;;;aAgCd,CAAC;cACQ,CAAC;eAEH,CAAC;;;;;;;;;;;;;;;;;;;aAmBF,CAAA;cAAsC,CAAC;eACf,CAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;kzBAmhBhC,CAAC;AAEF,eAAO,MAAM,kBAAkB,uBAK9B,CAAC"}

package/dist-tsc/base-plugins.js

@@ -52,9 +52,13 @@ function makeViewType(name, component) {
 function makeFileType(name, dataType, dataLoaderClass, dataSourceClass, optionsSchema) {
     return new PluginFileType(name, dataType, dataLoaderClass, dataSourceClass, optionsSchema);
 }
-// For when we have multiple file types with the same data type and options schema.
+// For when we have multiple file types with the same data type and options schema,
+// e.g., for Zip- and H5AD- variants of Zarr file types.
 function makeZarrFileTypes(name, dataType, dataLoaderClass, dataSourceClass, optionsSchema) {
     const altFileTypes = ALT_ZARR_STORE_TYPES[name];
+    if (!altFileTypes) {
+        throw new Error(`No alternative file types found for Zarr-based fileType ${name}`);
+    }
     return [
         new PluginFileType(name, dataType, dataLoaderClass, dataSourceClass, optionsSchema),
         ...Object.entries(altFileTypes).map(([key, fileType]) => {
@@ -143,15 +147,15 @@ export const baseFileTypes = [
     ...makeZarrFileTypes(FileType.OBS_SEGMENTATIONS_OME_ZARR, DataType.OBS_SEGMENTATIONS, OmeZarrAsObsSegmentationsLoader, ZarrDataSource, obsSegmentationsOmeZarrSchema),
     makeFileType(FileType.OBS_SEGMENTATIONS_OME_TIFF, DataType.OBS_SEGMENTATIONS, OmeTiffAsObsSegmentationsLoader, OmeTiffSource, obsSegmentationsOmeTiffSchema),
     // SpatialData file types
-    makeFileType(FileType.IMAGE_SPATIALDATA_ZARR, DataType.IMAGE, SpatialDataImageLoader, ZarrDataSource, imageSpatialdataSchema),
-    makeFileType(FileType.LABELS_SPATIALDATA_ZARR, DataType.OBS_SEGMENTATIONS, SpatialDataLabelsLoader, ZarrDataSource, obsSegmentationsSpatialdataSchema),
-    makeFileType(FileType.SHAPES_SPATIALDATA_ZARR, DataType.OBS_SEGMENTATIONS, SpatialDataObsSegmentationsLoader, SpatialDataShapesSource, obsSegmentationsSpatialdataSchema),
-    makeFileType(FileType.OBS_SPOTS_SPATIALDATA_ZARR, DataType.OBS_SPOTS, SpatialDataObsSpotsLoader, SpatialDataShapesSource, obsSpotsSpatialdataSchema),
-    makeFileType(FileType.OBS_POINTS_SPATIALDATA_ZARR, DataType.OBS_POINTS, SpatialDataObsPointsLoader, SpatialDataPointsSource, obsPointsSpatialdataSchema),
-    makeFileType(FileType.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR, DataType.OBS_FEATURE_MATRIX, ObsFeatureMatrixAnndataLoader, SpatialDataTableSource, obsFeatureMatrixSpatialdataSchema),
-    makeFileType(FileType.OBS_SETS_SPATIALDATA_ZARR, DataType.OBS_SETS, SpatialDataObsSetsLoader, SpatialDataTableSource, obsSetsSpatialdataSchema),
+    ...makeZarrFileTypes(FileType.IMAGE_SPATIALDATA_ZARR, DataType.IMAGE, SpatialDataImageLoader, ZarrDataSource, imageSpatialdataSchema),
+    ...makeZarrFileTypes(FileType.LABELS_SPATIALDATA_ZARR, DataType.OBS_SEGMENTATIONS, SpatialDataLabelsLoader, ZarrDataSource, obsSegmentationsSpatialdataSchema),
+    ...makeZarrFileTypes(FileType.SHAPES_SPATIALDATA_ZARR, DataType.OBS_SEGMENTATIONS, SpatialDataObsSegmentationsLoader, SpatialDataShapesSource, obsSegmentationsSpatialdataSchema),
+    ...makeZarrFileTypes(FileType.OBS_SPOTS_SPATIALDATA_ZARR, DataType.OBS_SPOTS, SpatialDataObsSpotsLoader, SpatialDataShapesSource, obsSpotsSpatialdataSchema),
+    ...makeZarrFileTypes(FileType.OBS_POINTS_SPATIALDATA_ZARR, DataType.OBS_POINTS, SpatialDataObsPointsLoader, SpatialDataPointsSource, obsPointsSpatialdataSchema),
+    ...makeZarrFileTypes(FileType.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR, DataType.OBS_FEATURE_MATRIX, ObsFeatureMatrixAnndataLoader, SpatialDataTableSource, obsFeatureMatrixSpatialdataSchema),
+    ...makeZarrFileTypes(FileType.OBS_SETS_SPATIALDATA_ZARR, DataType.OBS_SETS, SpatialDataObsSetsLoader, SpatialDataTableSource, obsSetsSpatialdataSchema),
+    ...makeZarrFileTypes(FileType.FEATURE_LABELS_SPATIALDATA_ZARR, DataType.FEATURE_LABELS, FeatureLabelsAnndataLoader, SpatialDataTableSource, featureLabelsAnndataSchema),
     makeFileType(FileType.OBS_SEGMENTATIONS_GLB, DataType.OBS_SEGMENTATIONS, GlbLoader, GlbSource, meshGlbSchema),
-    makeFileType(FileType.FEATURE_LABELS_SPATIALDATA_ZARR, DataType.FEATURE_LABELS, FeatureLabelsAnndataLoader, SpatialDataTableSource, featureLabelsAnndataSchema),
     // All legacy file types
     makeFileType(FileType.OBS_FEATURE_MATRIX_EXPRESSION_MATRIX_ZARR, DataType.OBS_FEATURE_MATRIX, MatrixZarrAsObsFeatureMatrixLoader, ZarrDataSource, z.null()),
     makeFileType(FileType.IMAGE_RASTER_JSON, DataType.IMAGE, RasterJsonAsImageLoader, JsonSource, rasterJsonSchema),

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/all",
-  "version": "3.6.12",
+  "version": "3.6.13",
   "author": "HIDIVE Lab at HMS",
   "homepage": "http://vitessce.io",
   "repository": {
@@ -17,37 +17,37 @@
   ],
   "dependencies": {
     "zod": "^3.21.4",
-    "@vitessce/styles": "3.6.12",
-    "@vitessce/constants-internal": "3.6.12",
-    "@vitessce/abstract": "3.6.12",
-    "@vitessce/error": "3.6.12",
-    "@vitessce/csv": "3.6.12",
-    "@vitessce/description": "3.6.12",
-    "@vitessce/feature-list": "3.6.12",
-    "@vitessce/genomic-profiles": "3.6.12",
-    "@vitessce/heatmap": "3.6.12",
-    "@vitessce/glb": "3.6.12",
-    "@vitessce/json": "3.6.12",
-    "@vitessce/layer-controller": "3.6.12",
-    "@vitessce/layer-controller-beta": "3.6.12",
-    "@vitessce/link-controller": "3.6.12",
-    "@vitessce/obs-sets-manager": "3.6.12",
-    "@vitessce/ome-tiff": "3.6.12",
-    "@vitessce/plugins": "3.6.12",
-    "@vitessce/scatterplot-embedding": "3.6.12",
-    "@vitessce/scatterplot-gating": "3.6.12",
-    "@vitessce/schemas": "3.6.12",
-    "@vitessce/spatial": "3.6.12",
-    "@vitessce/spatial-beta": "3.6.12",
-    "@vitessce/statistical-plots": "3.6.12",
-    "@vitessce/status": "3.6.12",
-    "@vitessce/vit-s": "3.6.12",
-    "@vitessce/zarr": "3.6.12",
-    "@vitessce/globals": "3.6.12",
-    "@vitessce/spatial-zarr": "3.6.12",
-    "@vitessce/spatial-three": "3.6.12",
-    "@vitessce/biomarker-select": "3.6.12",
-    "@vitessce/neuroglancer": "3.6.12"
+    "@vitessce/styles": "3.6.13",
+    "@vitessce/constants-internal": "3.6.13",
+    "@vitessce/abstract": "3.6.13",
+    "@vitessce/error": "3.6.13",
+    "@vitessce/csv": "3.6.13",
+    "@vitessce/description": "3.6.13",
+    "@vitessce/feature-list": "3.6.13",
+    "@vitessce/genomic-profiles": "3.6.13",
+    "@vitessce/heatmap": "3.6.13",
+    "@vitessce/glb": "3.6.13",
+    "@vitessce/json": "3.6.13",
+    "@vitessce/layer-controller": "3.6.13",
+    "@vitessce/layer-controller-beta": "3.6.13",
+    "@vitessce/link-controller": "3.6.13",
+    "@vitessce/obs-sets-manager": "3.6.13",
+    "@vitessce/ome-tiff": "3.6.13",
+    "@vitessce/plugins": "3.6.13",
+    "@vitessce/scatterplot-embedding": "3.6.13",
+    "@vitessce/scatterplot-gating": "3.6.13",
+    "@vitessce/schemas": "3.6.13",
+    "@vitessce/spatial": "3.6.13",
+    "@vitessce/spatial-beta": "3.6.13",
+    "@vitessce/statistical-plots": "3.6.13",
+    "@vitessce/status": "3.6.13",
+    "@vitessce/vit-s": "3.6.13",
+    "@vitessce/zarr": "3.6.13",
+    "@vitessce/globals": "3.6.13",
+    "@vitessce/spatial-zarr": "3.6.13",
+    "@vitessce/spatial-three": "3.6.13",
+    "@vitessce/biomarker-select": "3.6.13",
+    "@vitessce/neuroglancer": "3.6.13"
   },
   "devDependencies": {
     "@types/react": "^18.0.28",

package/src/base-plugins.ts

@@ -228,9 +228,13 @@ function makeViewType(name: string, component: any) {
 function makeFileType<T1 extends DataLoader, T2 extends DataSource>(name: string, dataType: string, dataLoaderClass: any, dataSourceClass: any, optionsSchema: z.ZodTypeAny) {
   return new PluginFileType(name, dataType, dataLoaderClass as T1, dataSourceClass as T2, optionsSchema);
 }
-// For when we have multiple file types with the same data type and options schema.
+// For when we have multiple file types with the same data type and options schema,
+// e.g., for Zip- and H5AD- variants of Zarr file types.
 function makeZarrFileTypes<T1 extends DataLoader, T2 extends DataSource>(name: string, dataType: string, dataLoaderClass: any, dataSourceClass: any, optionsSchema: z.ZodObject<any>) {
   const altFileTypes = ALT_ZARR_STORE_TYPES[name];
+  if (!altFileTypes) {
+    throw new Error(`No alternative file types found for Zarr-based fileType ${name}`);
+  }
   return [
     new PluginFileType(name, dataType, dataLoaderClass as T1, dataSourceClass as T2, optionsSchema),
     ...Object.entries(altFileTypes).map(([key, fileType]) => {
@@ -322,16 +326,16 @@ export const baseFileTypes = [
   ...makeZarrFileTypes(FileType.OBS_SEGMENTATIONS_OME_ZARR, DataType.OBS_SEGMENTATIONS, OmeZarrAsObsSegmentationsLoader, ZarrDataSource, obsSegmentationsOmeZarrSchema),
   makeFileType(FileType.OBS_SEGMENTATIONS_OME_TIFF, DataType.OBS_SEGMENTATIONS, OmeTiffAsObsSegmentationsLoader, OmeTiffSource, obsSegmentationsOmeTiffSchema),
   // SpatialData file types
-  makeFileType(FileType.IMAGE_SPATIALDATA_ZARR, DataType.IMAGE, SpatialDataImageLoader, ZarrDataSource, imageSpatialdataSchema),
-  makeFileType(FileType.LABELS_SPATIALDATA_ZARR, DataType.OBS_SEGMENTATIONS, SpatialDataLabelsLoader, ZarrDataSource, obsSegmentationsSpatialdataSchema),
-  makeFileType(FileType.SHAPES_SPATIALDATA_ZARR, DataType.OBS_SEGMENTATIONS, SpatialDataObsSegmentationsLoader, SpatialDataShapesSource, obsSegmentationsSpatialdataSchema),
-  makeFileType(FileType.OBS_SPOTS_SPATIALDATA_ZARR, DataType.OBS_SPOTS, SpatialDataObsSpotsLoader, SpatialDataShapesSource, obsSpotsSpatialdataSchema),
-  makeFileType(FileType.OBS_POINTS_SPATIALDATA_ZARR, DataType.OBS_POINTS, SpatialDataObsPointsLoader, SpatialDataPointsSource, obsPointsSpatialdataSchema),
-  makeFileType(FileType.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR, DataType.OBS_FEATURE_MATRIX, ObsFeatureMatrixAnndataLoader, SpatialDataTableSource, obsFeatureMatrixSpatialdataSchema),
-  makeFileType(FileType.OBS_SETS_SPATIALDATA_ZARR, DataType.OBS_SETS, SpatialDataObsSetsLoader, SpatialDataTableSource, obsSetsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType.IMAGE_SPATIALDATA_ZARR, DataType.IMAGE, SpatialDataImageLoader, ZarrDataSource, imageSpatialdataSchema),
+  ...makeZarrFileTypes(FileType.LABELS_SPATIALDATA_ZARR, DataType.OBS_SEGMENTATIONS, SpatialDataLabelsLoader, ZarrDataSource, obsSegmentationsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType.SHAPES_SPATIALDATA_ZARR, DataType.OBS_SEGMENTATIONS, SpatialDataObsSegmentationsLoader, SpatialDataShapesSource, obsSegmentationsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType.OBS_SPOTS_SPATIALDATA_ZARR, DataType.OBS_SPOTS, SpatialDataObsSpotsLoader, SpatialDataShapesSource, obsSpotsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType.OBS_POINTS_SPATIALDATA_ZARR, DataType.OBS_POINTS, SpatialDataObsPointsLoader, SpatialDataPointsSource, obsPointsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType.OBS_FEATURE_MATRIX_SPATIALDATA_ZARR, DataType.OBS_FEATURE_MATRIX, ObsFeatureMatrixAnndataLoader, SpatialDataTableSource, obsFeatureMatrixSpatialdataSchema),
+  ...makeZarrFileTypes(FileType.OBS_SETS_SPATIALDATA_ZARR, DataType.OBS_SETS, SpatialDataObsSetsLoader, SpatialDataTableSource, obsSetsSpatialdataSchema),
+  ...makeZarrFileTypes(FileType.FEATURE_LABELS_SPATIALDATA_ZARR, DataType.FEATURE_LABELS, FeatureLabelsAnndataLoader, SpatialDataTableSource, featureLabelsAnndataSchema),
 
   makeFileType(FileType.OBS_SEGMENTATIONS_GLB, DataType.OBS_SEGMENTATIONS, GlbLoader, GlbSource, meshGlbSchema),
-  makeFileType(FileType.FEATURE_LABELS_SPATIALDATA_ZARR, DataType.FEATURE_LABELS, FeatureLabelsAnndataLoader, SpatialDataTableSource, featureLabelsAnndataSchema),
   // All legacy file types
   makeFileType(FileType.OBS_FEATURE_MATRIX_EXPRESSION_MATRIX_ZARR, DataType.OBS_FEATURE_MATRIX, MatrixZarrAsObsFeatureMatrixLoader, ZarrDataSource, z.null()),
   makeFileType(FileType.IMAGE_RASTER_JSON, DataType.IMAGE, RasterJsonAsImageLoader, JsonSource, rasterJsonSchema),