@vitessce/all 3.4.7 → 3.4.8
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/{deflate-d380a1ac.js → deflate-71285f81.js} +1 -1
- package/dist/{hglib-fb36286c.js → hglib-f861e9cd.js} +1 -1
- package/dist/{index-bef5d3c7.js → index-dafcfc95.js} +2 -2
- package/dist/{index-18dbb697.js → index-ebba1e3d.js} +127 -149
- package/dist/index.js +1 -1
- package/dist/{jpeg-1e46c7a6.js → jpeg-4ea25d50.js} +1 -1
- package/dist/{lerc-7335edde.js → lerc-6dc56a5a.js} +1 -1
- package/dist/{lzw-24106b2f.js → lzw-13b6f62e.js} +1 -1
- package/dist/{packbits-acb5020d.js → packbits-bb6a3ee0.js} +1 -1
- package/dist/{raw-a6eed765.js → raw-478626a5.js} +1 -1
- package/dist/{troika-three-text.esm-57f1beb5.js → troika-three-text.esm-3d1f6283.js} +1 -1
- package/dist/{webimage-f766c600.js → webimage-f6a8e0e0.js} +1 -1
- package/package.json +24 -24
@@ -1,6 +1,6 @@
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import React__default from "react";
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import ReactDOM__default from "react-dom";
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import { aS as commonjsGlobal, aT as objectAssign, g as getDefaultExportFromCjs, aU as earcut, aV as getAugmentedNamespace } from "./index-
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import { aS as commonjsGlobal, aT as objectAssign, g as getDefaultExportFromCjs, aU as earcut, aV as getAugmentedNamespace } from "./index-ebba1e3d.js";
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function _mergeNamespaces(n, m) {
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for (var i = 0; i < m.length; i++) {
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const e = m[i];
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@@ -1,4 +1,4 @@
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-
import { g as getDefaultExportFromCjs, R as Raycaster, O as OrthographicCamera, P as PerspectiveCamera, S as Scene, a as PCFSoftShadowMap, N as NoToneMapping, A as ACESFilmicToneMapping, V as Vector2, b as Vector3, L as Layers, T as Texture, c as RGBAFormat, U as UnsignedByteType, W as WebGLRenderer, C as Camera, B as BasicShadowMap, d as PCFShadowMap, e as VSMShadowMap, f as BufferGeometry, M as Material, h as Color, i as Clock, _ as _extends, j as THREE, G as Group, k as Matrix4, l as TrianglesDrawMode, m as TriangleFanDrawMode, n as TriangleStripDrawMode, o as REVISION, p as Ray$1, q as Plane, E as EventDispatcher, r as MOUSE, s as TOUCH, Q as Quaternion, t as Spherical, u as Loader, v as LoaderUtils, F as FileLoader, w as SpotLight, x as PointLight, D as DirectionalLight, y as MeshBasicMaterial, z as MeshPhysicalMaterial, I as InstancedMesh, H as Object3D, J as TextureLoader, K as ImageBitmapLoader, X as BufferAttribute, Y as InterleavedBuffer, Z as LinearFilter, $ as LinearMipmapLinearFilter, a0 as RepeatWrapping, a1 as PointsMaterial, a2 as LineBasicMaterial, a3 as MeshStandardMaterial, a4 as DoubleSide, a5 as PropertyBinding, a6 as SkinnedMesh, a7 as Mesh, a8 as LineSegments, a9 as Line$1, aa as LineLoop, ab as Points, ac as MathUtils, ad as Skeleton, ae as InterpolateLinear, af as AnimationClip, ag as Bone, ah as NearestFilter, ai as NearestMipmapNearestFilter, aj as LinearMipmapNearestFilter, ak as NearestMipmapLinearFilter, al as ClampToEdgeWrapping, am as MirroredRepeatWrapping, an as InterpolateDiscrete, ao as FrontSide, ap as InterleavedBufferAttribute, aq as VectorKeyframeTrack, ar as QuaternionKeyframeTrack, as as NumberKeyframeTrack, at as Box3, au as Sphere, av as Interpolant, aw as InstancedBufferGeometry, ax as Float32BufferAttribute, ay as InstancedInterleavedBuffer, az as WireframeGeometry, aA as ShaderMaterial, aB as UniformsUtils, aC as UniformsLib, aD as Vector4, aE as Line3, aF as SphereGeometry, aG as Triangle, aH as BackSide, aI as jsxRuntimeExports, aJ as Matrix3, aK as CoordinationType, aL as Data3DTexture, aM as RedFormat, aN as FloatType, aO as getImageSize } from "./index-
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import { g as getDefaultExportFromCjs, R as Raycaster, O as OrthographicCamera, P as PerspectiveCamera, S as Scene, a as PCFSoftShadowMap, N as NoToneMapping, A as ACESFilmicToneMapping, V as Vector2, b as Vector3, L as Layers, T as Texture, c as RGBAFormat, U as UnsignedByteType, W as WebGLRenderer, C as Camera, B as BasicShadowMap, d as PCFShadowMap, e as VSMShadowMap, f as BufferGeometry, M as Material, h as Color, i as Clock, _ as _extends, j as THREE, G as Group, k as Matrix4, l as TrianglesDrawMode, m as TriangleFanDrawMode, n as TriangleStripDrawMode, o as REVISION, p as Ray$1, q as Plane, E as EventDispatcher, r as MOUSE, s as TOUCH, Q as Quaternion, t as Spherical, u as Loader, v as LoaderUtils, F as FileLoader, w as SpotLight, x as PointLight, D as DirectionalLight, y as MeshBasicMaterial, z as MeshPhysicalMaterial, I as InstancedMesh, H as Object3D, J as TextureLoader, K as ImageBitmapLoader, X as BufferAttribute, Y as InterleavedBuffer, Z as LinearFilter, $ as LinearMipmapLinearFilter, a0 as RepeatWrapping, a1 as PointsMaterial, a2 as LineBasicMaterial, a3 as MeshStandardMaterial, a4 as DoubleSide, a5 as PropertyBinding, a6 as SkinnedMesh, a7 as Mesh, a8 as LineSegments, a9 as Line$1, aa as LineLoop, ab as Points, ac as MathUtils, ad as Skeleton, ae as InterpolateLinear, af as AnimationClip, ag as Bone, ah as NearestFilter, ai as NearestMipmapNearestFilter, aj as LinearMipmapNearestFilter, ak as NearestMipmapLinearFilter, al as ClampToEdgeWrapping, am as MirroredRepeatWrapping, an as InterpolateDiscrete, ao as FrontSide, ap as InterleavedBufferAttribute, aq as VectorKeyframeTrack, ar as QuaternionKeyframeTrack, as as NumberKeyframeTrack, at as Box3, au as Sphere, av as Interpolant, aw as InstancedBufferGeometry, ax as Float32BufferAttribute, ay as InstancedInterleavedBuffer, az as WireframeGeometry, aA as ShaderMaterial, aB as UniformsUtils, aC as UniformsLib, aD as Vector4, aE as Line3, aF as SphereGeometry, aG as Triangle, aH as BackSide, aI as jsxRuntimeExports, aJ as Matrix3, aK as CoordinationType, aL as Data3DTexture, aM as RedFormat, aN as FloatType, aO as getImageSize } from "./index-ebba1e3d.js";
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import * as React from "react";
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import React__default, { useReducer, useRef, useDebugValue, useEffect, useLayoutEffect, useState, useMemo, forwardRef } from "react";
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import "@vitessce/vit-s";
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@@ -23800,7 +23800,7 @@ const Text = /* @__PURE__ */ React.forwardRef(({
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const {
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Text: TextMeshImpl,
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preloadFont
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} = suspend(async () => import("./troika-three-text.esm-
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} = suspend(async () => import("./troika-three-text.esm-3d1f6283.js"), []);
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const invalidate2 = useThree(({
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invalidate: invalidate3
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}) => invalidate3);
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@@ -15962,7 +15962,7 @@ function getStylesCreator(stylesOrCreator) {
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}
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}
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return {
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create: function
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create: function create6(theme, name2) {
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var styles35;
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try {
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styles35 = themingEnabled ? stylesOrCreator(theme) : stylesOrCreator;
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@@ -25159,7 +25159,7 @@ var classCallCheck$1 = function(instance, Constructor) {
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}
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};
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var createClass$1 = function() {
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function
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function defineProperties4(target2, props) {
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for (var i2 = 0; i2 < props.length; i2++) {
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var descriptor2 = props[i2];
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descriptor2.enumerable = descriptor2.enumerable || false;
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@@ -25171,9 +25171,9 @@ var createClass$1 = function() {
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}
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return function(Constructor, protoProps, staticProps) {
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if (protoProps)
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defineProperties4(Constructor.prototype, protoProps);
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if (staticProps)
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defineProperties4(Constructor, staticProps);
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return Constructor;
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};
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}();
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@@ -39275,13 +39275,15 @@ function stratifyExpressionData(sampleEdges, sampleSets, sampleSetSelection, exp
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}
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function aggregateStratifiedExpressionData(stratifiedResult, geneSelection) {
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const result = new InternMap([], JSON.stringify);
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if (stratifiedResult) {
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Array.from(stratifiedResult.keys()).forEach((cellSetKey) => {
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result.set(cellSetKey, new InternMap([], JSON.stringify));
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Array.from(stratifiedResult.get(cellSetKey).keys()).forEach((sampleSetKey) => {
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const values3 = stratifiedResult.get(cellSetKey).get(sampleSetKey).get(geneSelection[0]);
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result.get(cellSetKey).set(sampleSetKey, values3);
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});
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});
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}
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}
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return result;
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}
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var _global = { exports: {} };
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value: value2
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};
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};
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var dP$
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var dP$2 = require_objectDp();
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var createDesc$2 = _propertyDesc;
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var _hide = require_descriptors() ? function(object2, key2, value2) {
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return dP$
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return dP$2.f(object2, key2, createDesc$2(1, value2));
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} : function(object2, key2, value2) {
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object2[key2] = value2;
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return object2;
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var ctx = _ctx;
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var hide$2 = _hide;
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var has$a = _has$1;
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var PROTOTYPE$
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var PROTOTYPE$2 = "prototype";
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var $export$6 = function(type2, name2, source2) {
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var IS_FORCED = type2 & $export$6.F;
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var IS_GLOBAL = type2 & $export$6.G;
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var IS_BIND = type2 & $export$6.B;
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var IS_WRAP = type2 & $export$6.W;
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var exports2 = IS_GLOBAL ? core$3 : core$3[name2] || (core$3[name2] = {});
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var expProto = exports2[PROTOTYPE$
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var target2 = IS_GLOBAL ? global$5 : IS_STATIC ? global$5[name2] : (global$5[name2] || {})[PROTOTYPE$
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var expProto = exports2[PROTOTYPE$2];
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var target2 = IS_GLOBAL ? global$5 : IS_STATIC ? global$5[name2] : (global$5[name2] || {})[PROTOTYPE$2];
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var key2, own, out;
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source2 = name2;
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return C3.apply(this, arguments);
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F[PROTOTYPE$2] = C3[PROTOTYPE$2];
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return F;
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}(out) : IS_PROTO && typeof out == "function" ? ctx(Function.call, out) : out;
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var _uid = function(key2) {
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return "Symbol(".concat(key2 === void 0 ? "" : key2, ")_", (++id$4 + px$2).toString(36));
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var uid$3 = _uid;
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var _sharedKey = function(key2) {
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-
};
|
39846
|
-
return _objectCreate;
|
39847
|
-
}
|
39790
|
+
var anObject$1 = _anObject;
|
39791
|
+
var dPs = _objectDps;
|
39792
|
+
var enumBugKeys = _enumBugKeys;
|
39793
|
+
var IE_PROTO$1 = _sharedKey("IE_PROTO");
|
39794
|
+
var Empty$2 = function() {
|
39795
|
+
};
|
39796
|
+
var PROTOTYPE$1 = "prototype";
|
39797
|
+
var createDict = function() {
|
39798
|
+
var iframe = require_domCreate()("iframe");
|
39799
|
+
var i2 = enumBugKeys.length;
|
39800
|
+
var lt2 = "<";
|
39801
|
+
var gt2 = ">";
|
39802
|
+
var iframeDocument;
|
39803
|
+
iframe.style.display = "none";
|
39804
|
+
require_html().appendChild(iframe);
|
39805
|
+
iframe.src = "javascript:";
|
39806
|
+
iframeDocument = iframe.contentWindow.document;
|
39807
|
+
iframeDocument.open();
|
39808
|
+
iframeDocument.write(lt2 + "script" + gt2 + "document.F=Object" + lt2 + "/script" + gt2);
|
39809
|
+
iframeDocument.close();
|
39810
|
+
createDict = iframeDocument.F;
|
39811
|
+
while (i2--)
|
39812
|
+
delete createDict[PROTOTYPE$1][enumBugKeys[i2]];
|
39813
|
+
return createDict();
|
39814
|
+
};
|
39815
|
+
var _objectCreate = Object.create || function create2(O, Properties) {
|
39816
|
+
var result;
|
39817
|
+
if (O !== null) {
|
39818
|
+
Empty$2[PROTOTYPE$1] = anObject$1(O);
|
39819
|
+
result = new Empty$2();
|
39820
|
+
Empty$2[PROTOTYPE$1] = null;
|
39821
|
+
result[IE_PROTO$1] = O;
|
39822
|
+
} else
|
39823
|
+
result = createDict();
|
39824
|
+
return Properties === void 0 ? result : dPs(result, Properties);
|
39825
|
+
};
|
39848
39826
|
var _wks = { exports: {} };
|
39849
39827
|
var store = _sharedExports("wks");
|
39850
39828
|
var uid$2 = _uid;
|
@@ -39862,7 +39840,7 @@ var _setToStringTag = function(it, tag2, stat) {
|
|
39862
39840
|
if (it && !has$8(it = stat ? it : it.prototype, TAG))
|
39863
39841
|
def$1(it, TAG, { configurable: true, value: tag2 });
|
39864
39842
|
};
|
39865
|
-
var create$b =
|
39843
|
+
var create$b = _objectCreate;
|
39866
39844
|
var descriptor = _propertyDesc;
|
39867
39845
|
var setToStringTag$2 = _setToStringTag;
|
39868
39846
|
var IteratorPrototype$2 = {};
|
@@ -39875,7 +39853,7 @@ var _iterCreate = function(Constructor, NAME2, next3) {
|
|
39875
39853
|
};
|
39876
39854
|
var has$7 = _has$1;
|
39877
39855
|
var toObject$2 = _toObject;
|
39878
|
-
var IE_PROTO =
|
39856
|
+
var IE_PROTO = _sharedKey("IE_PROTO");
|
39879
39857
|
var ObjectProto$1 = Object.prototype;
|
39880
39858
|
var _objectGpo = Object.getPrototypeOf || function(O) {
|
39881
39859
|
O = toObject$2(O);
|
@@ -40038,23 +40016,23 @@ var setMeta = function(it) {
|
|
40038
40016
|
// weak collections IDs
|
40039
40017
|
} });
|
40040
40018
|
};
|
40041
|
-
var fastKey = function(it,
|
40019
|
+
var fastKey = function(it, create6) {
|
40042
40020
|
if (!isObject$h(it))
|
40043
40021
|
return typeof it == "symbol" ? it : (typeof it == "string" ? "S" : "P") + it;
|
40044
40022
|
if (!has$6(it, META$1)) {
|
40045
40023
|
if (!isExtensible(it))
|
40046
40024
|
return "F";
|
40047
|
-
if (!
|
40025
|
+
if (!create6)
|
40048
40026
|
return "E";
|
40049
40027
|
setMeta(it);
|
40050
40028
|
}
|
40051
40029
|
return it[META$1].i;
|
40052
40030
|
};
|
40053
|
-
var getWeak = function(it,
|
40031
|
+
var getWeak = function(it, create6) {
|
40054
40032
|
if (!has$6(it, META$1)) {
|
40055
40033
|
if (!isExtensible(it))
|
40056
40034
|
return true;
|
40057
|
-
if (!
|
40035
|
+
if (!create6)
|
40058
40036
|
return false;
|
40059
40037
|
setMeta(it);
|
40060
40038
|
}
|
@@ -40163,7 +40141,7 @@ var toObject$1 = _toObject;
|
|
40163
40141
|
var toIObject = _toIobject;
|
40164
40142
|
var toPrimitive = _toPrimitive;
|
40165
40143
|
var createDesc = _propertyDesc;
|
40166
|
-
var _create$1 =
|
40144
|
+
var _create$1 = _objectCreate;
|
40167
40145
|
var gOPNExt = _objectGopnExt;
|
40168
40146
|
var $GOPD = _objectGopd;
|
40169
40147
|
var $GOPS = _objectGops;
|
@@ -40230,7 +40208,7 @@ var $defineProperty$4 = function defineProperty2(it, key2, D2) {
|
|
40230
40208
|
}
|
40231
40209
|
return dP(it, key2, D2);
|
40232
40210
|
};
|
40233
|
-
var $defineProperties = function
|
40211
|
+
var $defineProperties = function defineProperties2(it, P2) {
|
40234
40212
|
anObject(it);
|
40235
40213
|
var keys4 = enumKeys(P2 = toIObject(P2));
|
40236
40214
|
var i2 = 0;
|
@@ -40240,7 +40218,7 @@ var $defineProperties = function defineProperties(it, P2) {
|
|
40240
40218
|
$defineProperty$4(it, key2 = keys4[i2++], P2[key2]);
|
40241
40219
|
return it;
|
40242
40220
|
};
|
40243
|
-
var $create = function
|
40221
|
+
var $create = function create3(it, P2) {
|
40244
40222
|
return P2 === void 0 ? _create$1(it) : $defineProperties(_create$1(it), P2);
|
40245
40223
|
};
|
40246
40224
|
var $propertyIsEnumerable = function propertyIsEnumerable(key2) {
|
@@ -40467,9 +40445,9 @@ $export$1($export$1.S, "Object", { setPrototypeOf: require_setProto().set });
|
|
40467
40445
|
var setPrototypeOf$2 = _coreExports.Object.setPrototypeOf;
|
40468
40446
|
var setPrototypeOf$1 = { "default": setPrototypeOf$2, __esModule: true };
|
40469
40447
|
var $export = _export;
|
40470
|
-
$export($export.S, "Object", { create:
|
40448
|
+
$export($export.S, "Object", { create: _objectCreate });
|
40471
40449
|
var $Object$2 = _coreExports.Object;
|
40472
|
-
var create$a = function
|
40450
|
+
var create$a = function create4(P2, D2) {
|
40473
40451
|
return $Object$2.create(P2, D2);
|
40474
40452
|
};
|
40475
40453
|
var create$9 = { "default": create$a, __esModule: true };
|
@@ -96261,11 +96239,11 @@ class Tileset2D {
|
|
96261
96239
|
this._dirty = false;
|
96262
96240
|
}
|
96263
96241
|
}
|
96264
|
-
_getTile(index2,
|
96242
|
+
_getTile(index2, create6) {
|
96265
96243
|
const id2 = this.getTileId(index2);
|
96266
96244
|
let tile = this._cache.get(id2);
|
96267
96245
|
let needsReload = false;
|
96268
|
-
if (!tile &&
|
96246
|
+
if (!tile && create6) {
|
96269
96247
|
tile = new Tile2DHeader(index2);
|
96270
96248
|
Object.assign(tile, this.getTileMetadata(tile.index));
|
96271
96249
|
Object.assign(tile, {
|
@@ -124664,7 +124642,7 @@ var defineProperty$2 = function(object2, name2, value2, predicate) {
|
|
124664
124642
|
defineDataProperty2(object2, name2, value2);
|
124665
124643
|
}
|
124666
124644
|
};
|
124667
|
-
var
|
124645
|
+
var defineProperties3 = function(object2, map2) {
|
124668
124646
|
var predicates = arguments.length > 2 ? arguments[2] : {};
|
124669
124647
|
var props = keys$4(map2);
|
124670
124648
|
if (hasSymbols$1) {
|
@@ -124674,8 +124652,8 @@ var defineProperties2 = function(object2, map2) {
|
|
124674
124652
|
defineProperty$2(object2, props[i2], map2[props[i2]], predicates[props[i2]]);
|
124675
124653
|
}
|
124676
124654
|
};
|
124677
|
-
|
124678
|
-
var defineProperties_1 =
|
124655
|
+
defineProperties3.supportsDescriptors = !!supportsDescriptors$2;
|
124656
|
+
var defineProperties_1 = defineProperties3;
|
124679
124657
|
var numberIsNaN = function(value2) {
|
124680
124658
|
return value2 !== value2;
|
124681
124659
|
};
|
@@ -158932,16 +158910,16 @@ async function getDecoder(fileDirectory) {
|
|
158932
158910
|
const Decoder = await importFn();
|
158933
158911
|
return new Decoder(fileDirectory);
|
158934
158912
|
}
|
158935
|
-
addDecoder([void 0, 1], () => import("./raw-
|
158936
|
-
addDecoder(5, () => import("./lzw-
|
158913
|
+
addDecoder([void 0, 1], () => import("./raw-478626a5.js").then((m2) => m2.default));
|
158914
|
+
addDecoder(5, () => import("./lzw-13b6f62e.js").then((m2) => m2.default));
|
158937
158915
|
addDecoder(6, () => {
|
158938
158916
|
throw new Error("old style JPEG compression is not supported.");
|
158939
158917
|
});
|
158940
|
-
addDecoder(7, () => import("./jpeg-
|
158941
|
-
addDecoder([8, 32946], () => import("./deflate-
|
158942
|
-
addDecoder(32773, () => import("./packbits-
|
158943
|
-
addDecoder(34887, () => import("./lerc-
|
158944
|
-
addDecoder(50001, () => import("./webimage-
|
158918
|
+
addDecoder(7, () => import("./jpeg-4ea25d50.js").then((m2) => m2.default));
|
158919
|
+
addDecoder([8, 32946], () => import("./deflate-71285f81.js").then((m2) => m2.default));
|
158920
|
+
addDecoder(32773, () => import("./packbits-bb6a3ee0.js").then((m2) => m2.default));
|
158921
|
+
addDecoder(34887, () => import("./lerc-6dc56a5a.js").then((m2) => m2.default));
|
158922
|
+
addDecoder(50001, () => import("./webimage-f6a8e0e0.js").then((m2) => m2.default));
|
158945
158923
|
function copyNewSize(array2, width2, height2, samplesPerPixel = 1) {
|
158946
158924
|
return new (Object.getPrototypeOf(array2)).constructor(width2 * height2 * samplesPerPixel);
|
158947
158925
|
}
|
@@ -174443,18 +174421,18 @@ function selection_lower() {
|
|
174443
174421
|
return this.each(lower);
|
174444
174422
|
}
|
174445
174423
|
function selection_append(name2) {
|
174446
|
-
var
|
174424
|
+
var create6 = typeof name2 === "function" ? name2 : creator(name2);
|
174447
174425
|
return this.select(function() {
|
174448
|
-
return this.appendChild(
|
174426
|
+
return this.appendChild(create6.apply(this, arguments));
|
174449
174427
|
});
|
174450
174428
|
}
|
174451
174429
|
function constantNull() {
|
174452
174430
|
return null;
|
174453
174431
|
}
|
174454
174432
|
function selection_insert(name2, before) {
|
174455
|
-
var
|
174433
|
+
var create6 = typeof name2 === "function" ? name2 : creator(name2), select2 = before == null ? constantNull : typeof before === "function" ? before : selector(before);
|
174456
174434
|
return this.select(function() {
|
174457
|
-
return this.insertBefore(
|
174435
|
+
return this.insertBefore(create6.apply(this, arguments), select2.apply(this, arguments) || null);
|
174458
174436
|
});
|
174459
174437
|
}
|
174460
174438
|
function remove$1() {
|
@@ -179743,7 +179721,7 @@ var typedFunction$1 = { exports: {} };
|
|
179743
179721
|
function undef() {
|
179744
179722
|
return void 0;
|
179745
179723
|
}
|
179746
|
-
function
|
179724
|
+
function create6() {
|
179747
179725
|
var _types = [
|
179748
179726
|
{ name: "number", test: function(x2) {
|
179749
179727
|
return typeof x2 === "number";
|
@@ -180495,7 +180473,7 @@ var typedFunction$1 = { exports: {} };
|
|
180495
180473
|
return createTypedFunction(name2, extractSignatures(fns));
|
180496
180474
|
}
|
180497
180475
|
});
|
180498
|
-
typed2.create =
|
180476
|
+
typed2.create = create6;
|
180499
180477
|
typed2.types = _types;
|
180500
180478
|
typed2.conversions = _conversions;
|
180501
180479
|
typed2.ignore = _ignore;
|
@@ -180526,7 +180504,7 @@ var typedFunction$1 = { exports: {} };
|
|
180526
180504
|
};
|
180527
180505
|
return typed2;
|
180528
180506
|
}
|
180529
|
-
return
|
180507
|
+
return create6();
|
180530
180508
|
});
|
180531
180509
|
})(typedFunction$1);
|
180532
180510
|
var typedFunctionExports = typedFunction$1.exports;
|
@@ -181238,11 +181216,11 @@ function getArrayDataType(array2, typeOf2) {
|
|
181238
181216
|
}
|
181239
181217
|
return type2;
|
181240
181218
|
}
|
181241
|
-
function factory(name2, dependencies2,
|
181219
|
+
function factory(name2, dependencies2, create6, meta2) {
|
181242
181220
|
function assertAndCreate(scope) {
|
181243
181221
|
var deps = pickShallow(scope, dependencies2.map(stripOptionalNotation));
|
181244
181222
|
assertDependencies(name2, dependencies2, scope);
|
181245
|
-
return
|
181223
|
+
return create6(deps);
|
181246
181224
|
}
|
181247
181225
|
assertAndCreate.isFactory = true;
|
181248
181226
|
assertAndCreate.fn = name2;
|
@@ -199886,7 +199864,7 @@ class ErrorBoundary extends React__default.Component {
|
|
199886
199864
|
}
|
199887
199865
|
}
|
199888
199866
|
const LazySpatialThree = React__default.lazy(async () => {
|
199889
|
-
const { SpatialWrapper: SpatialWrapper2 } = await import("./index-
|
199867
|
+
const { SpatialWrapper: SpatialWrapper2 } = await import("./index-dafcfc95.js");
|
199890
199868
|
return { default: SpatialWrapper2 };
|
199891
199869
|
});
|
199892
199870
|
const SpatialThreeAdapter = React__default.forwardRef((props, ref2) => jsxRuntimeExports.jsx("div", { ref: ref2, style: { width: "100%", height: "100%" }, children: jsxRuntimeExports.jsx(ErrorBoundary, { children: jsxRuntimeExports.jsx(Suspense, { fallback: jsxRuntimeExports.jsx("div", { children: "Loading..." }), children: jsxRuntimeExports.jsx(LazySpatialThree, { ...props }) }) }) }));
|
@@ -208934,7 +208912,7 @@ const HIGLASS_BUNDLE_VERSION = "1.11.13";
|
|
208934
208912
|
const HIGLASS_CSS_URL = `https://unpkg.com/${HIGLASS_PKG_NAME}@${HIGLASS_BUNDLE_VERSION}/dist/hglib.css`;
|
208935
208913
|
register({ dataFetcher: ZarrMultivecDataFetcher_default, config: ZarrMultivecDataFetcher_default.config }, { pluginType: "dataFetcher" });
|
208936
208914
|
const LazyHiGlassComponent = React__default.lazy(async () => {
|
208937
|
-
const { HiGlassComponent } = await import("./hglib-
|
208915
|
+
const { HiGlassComponent } = await import("./hglib-f861e9cd.js").then((n3) => n3.h);
|
208938
208916
|
return { default: HiGlassComponent };
|
208939
208917
|
});
|
208940
208918
|
const HG_SIZE = 800;
|
@@ -214266,12 +214244,12 @@ function summarize(iterable, keepZeros) {
|
|
214266
214244
|
}
|
214267
214245
|
function dotStratifiedExpressionData(stratifiedResult, posThreshold) {
|
214268
214246
|
const result = new InternMap([], JSON.stringify);
|
214269
|
-
|
214247
|
+
Array.from(stratifiedResult.keys()).forEach((cellSetKey) => {
|
214270
214248
|
result.set(cellSetKey, new InternMap([], JSON.stringify));
|
214271
|
-
|
214249
|
+
Array.from(stratifiedResult.get(cellSetKey).keys()).forEach((sampleSetKey) => {
|
214272
214250
|
result.get(cellSetKey).set(sampleSetKey, new InternMap([], JSON.stringify));
|
214273
214251
|
const allGenes = stratifiedResult.get(cellSetKey).get(sampleSetKey);
|
214274
|
-
|
214252
|
+
Array.from(allGenes.keys()).forEach((geneKey) => {
|
214275
214253
|
const values3 = allGenes.get(geneKey);
|
214276
214254
|
const exprMean = mean$1(values3);
|
214277
214255
|
const numPos = values3.reduce((acc, val) => val > posThreshold ? acc + 1 : acc, 0);
|
@@ -214288,9 +214266,9 @@ function dotStratifiedExpressionData(stratifiedResult, posThreshold) {
|
|
214288
214266
|
}
|
214289
214267
|
function summarizeStratifiedExpressionData(stratifiedResult, keepZeros) {
|
214290
214268
|
const summarizedResult = new InternMap([], JSON.stringify);
|
214291
|
-
|
214269
|
+
Array.from(stratifiedResult.keys()).forEach((cellSetKey) => {
|
214292
214270
|
summarizedResult.set(cellSetKey, new InternMap([], JSON.stringify));
|
214293
|
-
|
214271
|
+
Array.from(stratifiedResult.get(cellSetKey).keys()).forEach((sampleSetKey) => {
|
214294
214272
|
const values3 = stratifiedResult.get(cellSetKey).get(sampleSetKey);
|
214295
214273
|
const summary = summarize(values3, keepZeros);
|
214296
214274
|
summarizedResult.get(cellSetKey).set(sampleSetKey, summary);
|
@@ -214299,9 +214277,9 @@ function summarizeStratifiedExpressionData(stratifiedResult, keepZeros) {
|
|
214299
214277
|
return summarizedResult;
|
214300
214278
|
}
|
214301
214279
|
function histogramStratifiedExpressionData(summarizedResult, binCount, yMinProp) {
|
214302
|
-
const groupSummaries =
|
214280
|
+
const groupSummaries = Array.from(summarizedResult.keys()).map((cellSetKey) => ({
|
214303
214281
|
key: cellSetKey,
|
214304
|
-
value:
|
214282
|
+
value: Array.from(summarizedResult.get(cellSetKey).keys()).map((sampleSetKey) => ({
|
214305
214283
|
key: sampleSetKey,
|
214306
214284
|
value: summarizedResult.get(cellSetKey).get(sampleSetKey)
|
214307
214285
|
}))
|
@@ -230765,7 +230743,7 @@ inherits(Projection$1, Transform2, {
|
|
230765
230743
|
transform(_, pulse2) {
|
230766
230744
|
let proj = this.value;
|
230767
230745
|
if (!proj || _.modified("type")) {
|
230768
|
-
this.value = proj =
|
230746
|
+
this.value = proj = create5(_.type);
|
230769
230747
|
projectionProperties.forEach((prop) => {
|
230770
230748
|
if (_[prop] != null)
|
230771
230749
|
set$3(proj, prop, _[prop]);
|
@@ -230787,7 +230765,7 @@ function fit(proj, _) {
|
|
230787
230765
|
const data2 = collectGeoJSON(_.fit);
|
230788
230766
|
_.extent ? proj.fitExtent(_.extent, data2) : _.size ? proj.fitSize(_.size, data2) : 0;
|
230789
230767
|
}
|
230790
|
-
function
|
230768
|
+
function create5(type2) {
|
230791
230769
|
const constructor = projection((type2 || "mercator").toLowerCase());
|
230792
230770
|
if (!constructor)
|
230793
230771
|
error("Unrecognized projection type: " + type2);
|
@@ -239594,8 +239572,8 @@ function bind3(view, el2, binding) {
|
|
239594
239572
|
bind4.update = debounce(param2.debounce, bind4.update);
|
239595
239573
|
}
|
239596
239574
|
}
|
239597
|
-
const
|
239598
|
-
|
239575
|
+
const create6 = param2.input == null && param2.element ? target : generate$1;
|
239576
|
+
create6(bind4, el2, param2, view);
|
239599
239577
|
if (!bind4.active) {
|
239600
239578
|
view.on(view._signals[param2.signal], null, () => {
|
239601
239579
|
bind4.source ? bind4.source = false : bind4.set(view.signal(param2.signal));
|
@@ -266184,9 +266162,9 @@ function useExpressionSummaries(sampleEdges, sampleSets, sampleSetSelection, exp
|
|
266184
266162
|
const cellSetToUuid = new InternMap(cellSetSelection == null ? void 0 : cellSetSelection.map((sampleSet) => [sampleSet, v4$1()]), JSON.stringify);
|
266185
266163
|
const sampleSetToUuid = new InternMap(sampleSetSelection == null ? void 0 : sampleSetSelection.map((sampleSet) => [sampleSet, v4$1()]), JSON.stringify);
|
266186
266164
|
const result = [];
|
266187
|
-
|
266188
|
-
|
266189
|
-
|
266165
|
+
Array.from(dotData.keys()).forEach((cellSetKey) => {
|
266166
|
+
Array.from(dotData.get(cellSetKey).keys()).forEach((sampleSetKey) => {
|
266167
|
+
Array.from(dotData.get(cellSetKey).get(sampleSetKey).keys()).forEach((geneKey) => {
|
266190
266168
|
const dotObj = dotData.get(cellSetKey).get(sampleSetKey).get(geneKey);
|
266191
266169
|
const featureName = geneKey;
|
266192
266170
|
result.push({
|
package/dist/index.js
CHANGED
@@ -1,5 +1,5 @@
|
|
1
1
|
import { i as inflate_1 } from "./pako.esm-68f84e2a.js";
|
2
|
-
import { g as getDefaultExportFromCjs, aP as BaseDecoder, aQ as LercParameters, aR as LercAddCompression } from "./index-
|
2
|
+
import { g as getDefaultExportFromCjs, aP as BaseDecoder, aQ as LercParameters, aR as LercAddCompression } from "./index-ebba1e3d.js";
|
3
3
|
import "react";
|
4
4
|
import "@vitessce/vit-s";
|
5
5
|
import "react-dom";
|
@@ -1,4 +1,4 @@
|
|
1
|
-
import { aB as UniformsUtils, aW as MeshDepthMaterial, aX as RGBADepthPacking, aY as MeshDistanceMaterial, aZ as ShaderChunk, T as Texture, Z as LinearFilter, aw as InstancedBufferGeometry, au as Sphere, at as Box3, aH as BackSide, a4 as DoubleSide, a_ as InstancedBufferAttribute, V as Vector2, aD as Vector4, h as Color, aJ as Matrix3, a7 as Mesh, ao as FrontSide, a$ as PlaneGeometry, f as BufferGeometry, ax as Float32BufferAttribute, y as MeshBasicMaterial, k as Matrix4, b as Vector3 } from "./index-
|
1
|
+
import { aB as UniformsUtils, aW as MeshDepthMaterial, aX as RGBADepthPacking, aY as MeshDistanceMaterial, aZ as ShaderChunk, T as Texture, Z as LinearFilter, aw as InstancedBufferGeometry, au as Sphere, at as Box3, aH as BackSide, a4 as DoubleSide, a_ as InstancedBufferAttribute, V as Vector2, aD as Vector4, h as Color, aJ as Matrix3, a7 as Mesh, ao as FrontSide, a$ as PlaneGeometry, f as BufferGeometry, ax as Float32BufferAttribute, y as MeshBasicMaterial, k as Matrix4, b as Vector3 } from "./index-ebba1e3d.js";
|
2
2
|
import "react";
|
3
3
|
import "@vitessce/vit-s";
|
4
4
|
import "react-dom";
|
package/package.json
CHANGED
@@ -1,6 +1,6 @@
|
|
1
1
|
{
|
2
2
|
"name": "@vitessce/all",
|
3
|
-
"version": "3.4.
|
3
|
+
"version": "3.4.8",
|
4
4
|
"author": "Gehlenborg Lab",
|
5
5
|
"homepage": "http://vitessce.io",
|
6
6
|
"repository": {
|
@@ -18,29 +18,29 @@
|
|
18
18
|
"dependencies": {
|
19
19
|
"@material-ui/core": "~4.12.3",
|
20
20
|
"zod": "^3.21.4",
|
21
|
-
"@vitessce/constants-internal": "3.4.
|
22
|
-
"@vitessce/csv": "3.4.
|
23
|
-
"@vitessce/description": "3.4.
|
24
|
-
"@vitessce/feature-list": "3.4.
|
25
|
-
"@vitessce/genomic-profiles": "3.4.
|
26
|
-
"@vitessce/heatmap": "3.4.
|
27
|
-
"@vitessce/glb": "3.4.
|
28
|
-
"@vitessce/json": "3.4.
|
29
|
-
"@vitessce/layer-controller": "3.4.
|
30
|
-
"@vitessce/layer-controller-beta": "3.4.
|
31
|
-
"@vitessce/obs-sets-manager": "3.4.
|
32
|
-
"@vitessce/ome-tiff": "3.4.
|
33
|
-
"@vitessce/plugins": "3.4.
|
34
|
-
"@vitessce/scatterplot-embedding": "3.4.
|
35
|
-
"@vitessce/scatterplot-gating": "3.4.
|
36
|
-
"@vitessce/schemas": "3.4.
|
37
|
-
"@vitessce/spatial": "3.4.
|
38
|
-
"@vitessce/spatial-beta": "3.4.
|
39
|
-
"@vitessce/statistical-plots": "3.4.
|
40
|
-
"@vitessce/status": "3.4.
|
41
|
-
"@vitessce/vit-s": "3.4.
|
42
|
-
"@vitessce/zarr": "3.4.
|
43
|
-
"@vitessce/spatial-three": "3.4.
|
21
|
+
"@vitessce/constants-internal": "3.4.8",
|
22
|
+
"@vitessce/csv": "3.4.8",
|
23
|
+
"@vitessce/description": "3.4.8",
|
24
|
+
"@vitessce/feature-list": "3.4.8",
|
25
|
+
"@vitessce/genomic-profiles": "3.4.8",
|
26
|
+
"@vitessce/heatmap": "3.4.8",
|
27
|
+
"@vitessce/glb": "3.4.8",
|
28
|
+
"@vitessce/json": "3.4.8",
|
29
|
+
"@vitessce/layer-controller": "3.4.8",
|
30
|
+
"@vitessce/layer-controller-beta": "3.4.8",
|
31
|
+
"@vitessce/obs-sets-manager": "3.4.8",
|
32
|
+
"@vitessce/ome-tiff": "3.4.8",
|
33
|
+
"@vitessce/plugins": "3.4.8",
|
34
|
+
"@vitessce/scatterplot-embedding": "3.4.8",
|
35
|
+
"@vitessce/scatterplot-gating": "3.4.8",
|
36
|
+
"@vitessce/schemas": "3.4.8",
|
37
|
+
"@vitessce/spatial": "3.4.8",
|
38
|
+
"@vitessce/spatial-beta": "3.4.8",
|
39
|
+
"@vitessce/statistical-plots": "3.4.8",
|
40
|
+
"@vitessce/status": "3.4.8",
|
41
|
+
"@vitessce/vit-s": "3.4.8",
|
42
|
+
"@vitessce/zarr": "3.4.8",
|
43
|
+
"@vitessce/spatial-three": "3.4.8"
|
44
44
|
},
|
45
45
|
"devDependencies": {
|
46
46
|
"@types/react": "^18.0.28",
|