@vitessce/all 3.4.6 → 3.4.8

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/dist/index.js CHANGED
@@ -1,13 +1,14 @@
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- import { b3, b1, b4, b2, b0, b5 } from "./index-83f9cce3.js";
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+ import { b5, b3, b1, b4, b2, b0, b6 } from "./index-ebba1e3d.js";
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  import { useCoordination } from "@vitessce/vit-s";
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  import "react";
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  import "react-dom";
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  export {
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+ b5 as PluginAsyncFunction,
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  b3 as PluginCoordinationType,
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  b1 as PluginFileType,
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  b4 as PluginJointFileType,
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  b2 as PluginViewType,
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  b0 as Vitessce,
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  useCoordination,
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- b5 as z
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+ b6 as z
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  };
@@ -1,4 +1,4 @@
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- import { aP as BaseDecoder } from "./index-83f9cce3.js";
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+ import { aP as BaseDecoder } from "./index-ebba1e3d.js";
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  import "react";
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  import "@vitessce/vit-s";
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  import "react-dom";
@@ -1,5 +1,5 @@
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  import { i as inflate_1 } from "./pako.esm-68f84e2a.js";
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- import { g as getDefaultExportFromCjs, aP as BaseDecoder, aQ as LercParameters, aR as LercAddCompression } from "./index-83f9cce3.js";
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+ import { g as getDefaultExportFromCjs, aP as BaseDecoder, aQ as LercParameters, aR as LercAddCompression } from "./index-ebba1e3d.js";
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  import "react";
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  import "@vitessce/vit-s";
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  import "react-dom";
@@ -1,4 +1,4 @@
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- import { aP as BaseDecoder } from "./index-83f9cce3.js";
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+ import { aP as BaseDecoder } from "./index-ebba1e3d.js";
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  import "react";
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  import "@vitessce/vit-s";
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  import "react-dom";
@@ -1,4 +1,4 @@
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- import { aP as BaseDecoder } from "./index-83f9cce3.js";
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+ import { aP as BaseDecoder } from "./index-ebba1e3d.js";
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  import "react";
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  import "@vitessce/vit-s";
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  import "react-dom";
@@ -1,4 +1,4 @@
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- import { aP as BaseDecoder } from "./index-83f9cce3.js";
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+ import { aP as BaseDecoder } from "./index-ebba1e3d.js";
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  import "react";
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  import "@vitessce/vit-s";
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  import "react-dom";
@@ -1,4 +1,4 @@
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- import { aC as UniformsUtils, aW as MeshDepthMaterial, aX as RGBADepthPacking, aY as MeshDistanceMaterial, aZ as ShaderChunk, T as Texture, E as LinearFilter, ax as InstancedBufferGeometry, ao as Sphere, an as Box3, aH as BackSide, Y as DoubleSide, a_ as InstancedBufferAttribute, V as Vector2, aE as Vector4, h as Color, aJ as Matrix3, a0 as Mesh, ai as FrontSide, a$ as PlaneGeometry, f as BufferGeometry, ay as Float32BufferAttribute, t as MeshBasicMaterial, k as Matrix4, b as Vector3 } from "./index-83f9cce3.js";
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+ import { aB as UniformsUtils, aW as MeshDepthMaterial, aX as RGBADepthPacking, aY as MeshDistanceMaterial, aZ as ShaderChunk, T as Texture, Z as LinearFilter, aw as InstancedBufferGeometry, au as Sphere, at as Box3, aH as BackSide, a4 as DoubleSide, a_ as InstancedBufferAttribute, V as Vector2, aD as Vector4, h as Color, aJ as Matrix3, a7 as Mesh, ao as FrontSide, a$ as PlaneGeometry, f as BufferGeometry, ax as Float32BufferAttribute, y as MeshBasicMaterial, k as Matrix4, b as Vector3 } from "./index-ebba1e3d.js";
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  import "react";
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  import "@vitessce/vit-s";
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  import "react-dom";
@@ -1,4 +1,4 @@
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- import { aP as BaseDecoder } from "./index-83f9cce3.js";
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+ import { aP as BaseDecoder } from "./index-ebba1e3d.js";
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  import "react";
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  import "@vitessce/vit-s";
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  import "react-dom";
@@ -1 +1 @@
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- {"version":3,"file":"Vitessce.d.ts","sourceRoot":"","sources":["../src/Vitessce.tsx"],"names":[],"mappings":"AAgBA,wBAAgB,QAAQ,CAAC,KAAK,EAAE,GAAG,8CA8DlC"}
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+ {"version":3,"file":"Vitessce.d.ts","sourceRoot":"","sources":["../src/Vitessce.tsx"],"names":[],"mappings":"AAgBA,wBAAgB,QAAQ,CAAC,KAAK,EAAE,GAAG,8CAiElC"}
@@ -5,7 +5,7 @@ import { VitS, logConfig, } from '@vitessce/vit-s';
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  import { upgradeAndParse, } from '@vitessce/schemas';
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  import { baseViewTypes, baseFileTypes, baseJointFileTypes, baseCoordinationTypes, } from './base-plugins.js';
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  export function Vitessce(props) {
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- const { config, onConfigUpgrade, pluginViewTypes: pluginViewTypesProp, pluginFileTypes: pluginFileTypesProp, pluginCoordinationTypes: pluginCoordinationTypesProp, pluginJointFileTypes: pluginJointFileTypesProp, } = props;
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+ const { config, onConfigUpgrade, pluginViewTypes: pluginViewTypesProp, pluginFileTypes: pluginFileTypesProp, pluginCoordinationTypes: pluginCoordinationTypesProp, pluginJointFileTypes: pluginJointFileTypesProp, pluginAsyncFunctions, } = props;
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  // If config.uid exists, then use it for hook dependencies to detect changes
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  // (controlled component case). If not, then use the config object itself
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  // and assume the un-controlled component case.
@@ -41,5 +41,6 @@ export function Vitessce(props) {
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  const mergedPluginCoordinationTypes = useMemo(() => ([
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  ...baseCoordinationTypes, ...(pluginCoordinationTypesProp || []),
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  ]), [pluginCoordinationTypesProp]);
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- return (_jsx(VitS, { ...props, config: configOrWarning, viewTypes: mergedPluginViewTypes, fileTypes: mergedPluginFileTypes, jointFileTypes: mergedPluginJointFileTypes, coordinationTypes: mergedPluginCoordinationTypes, warning: (success ? null : configOrWarning) }));
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+ // TODO: merge with a set of "base" async functions
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+ return (_jsx(VitS, { ...props, config: configOrWarning, viewTypes: mergedPluginViewTypes, fileTypes: mergedPluginFileTypes, jointFileTypes: mergedPluginJointFileTypes, coordinationTypes: mergedPluginCoordinationTypes, asyncFunctions: pluginAsyncFunctions, warning: (success ? null : configOrWarning) }));
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  }
@@ -121,6 +121,13 @@ export declare const baseJointFileTypes: (PluginJointFileType<z.ZodObject<{
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  embeddingType: string;
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  dims?: number[] | undefined;
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  }>, "many">]>>;
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+ sampleEdges: z.ZodOptional<z.ZodObject<{
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+ path: z.ZodString;
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+ }, "strip", z.ZodTypeAny, {
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+ path: string;
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+ }, {
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+ path: string;
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+ }>>;
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  }, "strip", z.ZodTypeAny, {
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  obsLabels?: {
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  path: string;
@@ -167,6 +174,9 @@ export declare const baseJointFileTypes: (PluginJointFileType<z.ZodObject<{
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  embeddingType: string;
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  dims?: number[] | undefined;
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  }[] | undefined;
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+ sampleEdges?: {
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+ path: string;
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+ } | undefined;
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  }, {
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  obsLabels?: {
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  path: string;
@@ -213,6 +223,9 @@ export declare const baseJointFileTypes: (PluginJointFileType<z.ZodObject<{
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  embeddingType: string;
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  dims?: number[] | undefined;
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  }[] | undefined;
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+ sampleEdges?: {
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+ path: string;
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+ } | undefined;
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  }>> | PluginJointFileType<z.ZodObject<{
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  image: z.ZodOptional<z.ZodObject<{
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  coordinateTransformations: z.ZodOptional<z.ZodArray<z.ZodUnion<[z.ZodObject<{
@@ -920,26 +933,26 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
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  name: string;
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  color?: number[] | undefined;
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  } & {
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- children: (({
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+ children: Array<({
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  name: string;
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  color?: number[] | undefined;
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  } & any) | {
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  set: [string, number | null][];
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  name: string;
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  color?: number[] | undefined;
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- })[];
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+ }>;
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  }, z.ZodTypeDef, {
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  name: string;
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  color?: number[] | undefined;
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  } & {
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- children: (({
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+ children: Array<({
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  name: string;
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  color?: number[] | undefined;
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  } & any) | {
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  set: [string, number | null][];
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  name: string;
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  color?: number[] | undefined;
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- })[];
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+ }>;
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  }>, "many">;
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  }, "strip", z.ZodTypeAny, {
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  version: "0.1.3";
@@ -947,14 +960,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
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  name: string;
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  color?: number[] | undefined;
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  } & {
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- children: (({
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+ children: Array<({
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  name: string;
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  color?: number[] | undefined;
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  } & any) | {
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  set: [string, number | null][];
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  name: string;
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  color?: number[] | undefined;
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- })[];
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+ }>;
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  })[];
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  }, {
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  version: "0.1.3";
@@ -962,14 +975,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
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  name: string;
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  color?: number[] | undefined;
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  } & {
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- children: (({
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+ children: Array<({
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  name: string;
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  color?: number[] | undefined;
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  } & any) | {
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  set: [string, number | null][];
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  name: string;
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  color?: number[] | undefined;
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- })[];
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+ }>;
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  })[];
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  }>, z.ZodObject<{
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  version: z.ZodLiteral<"0.1.2">;
@@ -977,26 +990,26 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
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  name: string;
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  color?: number[] | undefined;
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  } & {
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- children: (({
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+ children: Array<({
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  name: string;
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  color?: number[] | undefined;
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  } & any) | {
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  set: string[];
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  name: string;
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  color?: number[] | undefined;
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- })[];
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+ }>;
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  }, z.ZodTypeDef, {
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  name: string;
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  color?: number[] | undefined;
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  } & {
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- children: (({
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+ children: Array<({
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  name: string;
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  color?: number[] | undefined;
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  } & any) | {
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  set: string[];
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  name: string;
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  color?: number[] | undefined;
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- })[];
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+ }>;
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  }>, "many">;
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  }, "strip", z.ZodTypeAny, {
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  version: "0.1.2";
@@ -1004,14 +1017,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
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  name: string;
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  color?: number[] | undefined;
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  } & {
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- children: (({
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+ children: Array<({
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  name: string;
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  color?: number[] | undefined;
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  } & any) | {
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  set: string[];
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  name: string;
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  color?: number[] | undefined;
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- })[];
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+ }>;
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  })[];
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  }, {
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  version: "0.1.2";
@@ -1019,14 +1032,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
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  name: string;
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  color?: number[] | undefined;
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  } & {
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- children: (({
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+ children: Array<({
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  name: string;
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  color?: number[] | undefined;
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  } & any) | {
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  set: string[];
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  name: string;
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  color?: number[] | undefined;
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- })[];
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+ }>;
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  })[];
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  }>]>, {
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  version: "0.1.3";
@@ -1034,14 +1047,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
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  name: string;
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  color?: number[] | undefined;
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  } & {
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- children: (({
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+ children: Array<({
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  name: string;
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  color?: number[] | undefined;
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  } & any) | {
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  set: [string, number | null][];
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  name: string;
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  color?: number[] | undefined;
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- })[];
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+ }>;
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  })[];
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  }, {
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  version: "0.1.2";
@@ -1049,14 +1062,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
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  name: string;
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  color?: number[] | undefined;
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  } & {
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- children: (({
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+ children: Array<({
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  name: string;
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  color?: number[] | undefined;
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  } & any) | {
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  set: string[];
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  name: string;
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  color?: number[] | undefined;
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- })[];
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+ }>;
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  })[];
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  } | {
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  version: "0.1.3";
@@ -1064,14 +1077,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
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  name: string;
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  color?: number[] | undefined;
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  } & {
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- children: (({
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+ children: Array<({
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  name: string;
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  color?: number[] | undefined;
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  } & any) | {
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  set: [string, number | null][];
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  name: string;
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  color?: number[] | undefined;
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- })[];
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+ }>;
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  })[];
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- }>>> | PluginCoordinationType<z.ZodNullable<z.ZodUnion<[z.ZodNumber, z.ZodString]>>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodNumber, "many">>> | PluginCoordinationType<z.ZodNullable<z.ZodEnum<["BlackIsZero", "RGB"]>>> | PluginCoordinationType<z.ZodNullable<z.ZodEnum<["2D", "3D"]>>> | PluginCoordinationType<z.ZodEnum<["maximumIntensityProjection", "additive"]>> | PluginCoordinationType<z.ZodEnum<["vertical", "horizontal"]>>)[];
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+ }>>> | PluginCoordinationType<z.ZodNullable<z.ZodUnion<[z.ZodNumber, z.ZodString]>>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodNumber, "many">>> | PluginCoordinationType<z.ZodNullable<z.ZodEnum<["BlackIsZero", "RGB"]>>> | PluginCoordinationType<z.ZodNullable<z.ZodEnum<["2D", "3D"]>>> | PluginCoordinationType<z.ZodEnum<["maximumIntensityProjection", "additive"]>> | PluginCoordinationType<z.ZodEnum<["vertical", "horizontal"]>> | PluginCoordinationType<z.ZodEnum<["cellSetSelection", "sampleSetSelection", "contourColor"]>>)[];
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  //# sourceMappingURL=base-plugins.d.ts.map
@@ -1 +1 @@
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- {"version":3,"file":"base-plugins.d.ts","sourceRoot":"","sources":["../src/base-plugins.ts"],"names":[],"mappings":"AAUA,OAAO,EACL,cAAc,EACd,mBAAmB,EACnB,cAAc,EACd,sBAAsB,EACvB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,UAAU,EACV,UAAU,EACX,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EACL,CAAC,EA4CF,MAAM,mBAAmB,CAAC;AAmI3B,eAAO,MAAM,aAAa,kBAkBzB,CAAC;AAEF,eAAO,MAAM,aAAa,wDAqEzB,CAAC;AAEF,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;OAgB9B,CAAC;AAIF,eAAO,MAAM,qBAAqB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;4bAqLjC,CAAC"}
1
+ {"version":3,"file":"base-plugins.d.ts","sourceRoot":"","sources":["../src/base-plugins.ts"],"names":[],"mappings":"AAUA,OAAO,EACL,cAAc,EACd,mBAAmB,EACnB,cAAc,EACd,sBAAsB,EACvB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,UAAU,EACV,UAAU,EACX,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EACL,CAAC,EA4CF,MAAM,mBAAmB,CAAC;AAoI3B,eAAO,MAAM,aAAa,kBAmBzB,CAAC;AAEF,eAAO,MAAM,aAAa,wDAqEzB,CAAC;AAEF,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;yBAuDH,CAAC;gCAAsD,CAAC;;;yBAChB,CAAC;gCACxC,CAAC;;;;;;;;;iBAIF,CAAC;;;;iBAC0C,CAAC;;;;;;;YAGxD,CAAC;;;YAEZ,CAAC;;;;;;;YAUe,CAAC;;;YAGf,CAAC;;;;;;;YAIuC,CAAC;;;YACb,CAAC;;;;;;;;;;;;;;YASF,CAAC;;;YAIxB,CAAC;;;;;;;;YASa,CAAC;;;;YAGG,CAAC;;;;;;;;;;;;;;;;;;;;;;;;yBAe1B,CAAH;gCAAsD,CAAC;;;;;iBASpC,CAAC;;;;YAKP,CAAC;;;;YAGM,CAAC;;;;YAIf,CAAC;;;;;;;YAON,CAAD;;;;YAIK,CAAC;;;;;;;;;;;;;;;;;;;;yBAMqE,CAAC;gCAC9C,CAAC;;;;;iBAEjB,CAAC;;;;YACK,CAAC;;;;YACI,CAAC;;;;YACE,CAAC;;;;;;;YACkE,CAAC;;;;YACV,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;iCAWI,CAAC;;;;;;;;;;;iCAGb,CAAA;;;;;;;;;;;;;;;;;;;;;;;;yBAMD,CAAC;gCAC1D,CAAC;cAAoC,CAAC;;;yBACV,CAAC;gCACnC,CAAC;cAAoC,CAAC;;;;;;;iBAEkC,CAAC;;;iBACrB,CAAC;;;;;;;;;;;;qBAKmB,CAAC;;;;qBAEnE,CAAC;;;;;;qBAEoC,CAAC;;cAAiD,CAAC;iBAE1G,CAAA;;;;;qBAO0B,CAAC;;cAAiD,CAAC;iBACrD,CAAC;;;;;iCACiC,CAAC;;;;;;;;;;;;;;;yBAGR,CAAC;gCAEtC,CAAC;cAAoC,CAAC;;;;iBAAiG,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;iCAAmH,CAAC;;;;;;;;;;;;;;;yBAAwW,CAAC;gCAAsD,CAAC;cAAoC,CAAC;;;;iBAAiG,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;sBAlbtyC,CAAC;;;;;qBAKpE,CAAC;qBACc,CAAC;;;;;;;;;qBAaxB,CAAA;6BAEK,CAAC;;sBAEE,CAAC;;;;;qBAUiB,CAAC;qBACM,CAAC;;;;;;;;;qBAQpC,CAAC;6BAGK,CAAC;;;;;;;;;;;;;kBAwBF,CAAC;mBAEW,CAAC;gBAEhB,CAAC;gBAEI,CAAC;uBAEN,CAAA;iBACsB,CAAC;oBAItB,CAAC;oBAGH,CAAC;qBAEa,CAAC;;kBAGb,CAAC;mBACY,CAAC;gBAEZ,CAAC;gBAEH,CAAC;uBACuB,CAAC;iBAEV,CAAC;oBAED,CAAC;oBAInB,CAFA;qBAC0C,CAAC;;;;;;gBAEsC,CAAC;sBAG5E,CAAC;;;;;qBAC2B,CAAA;qBAA4C,CAAC;;;;;;;;;qBAGqD,CAAC;6BAChI,CAAC;;mBACF,CAAC;kBACW,CAAC;mBAAyC,CAAC;gBAClD,CAAC;gBAAsC,CAAC;uBAA6C,CAAC;iBAI7F,CAAC;oBACW,CAAC;oBAA0C,CAAC;qBAClB,CAAC;;;;;;gBAEI,CAAC;sBACzB,CAAC;;;;;qBAGiC,CAAC;qBAClB,CAAC;;;;;;;;;qBAG6C,CAAC;6BAC1C,CAAC;;mBACJ,CAAC;kBAAsB,CAAC;mBACxC,CAAC;gBAClB,CAAC;gBACN,CAAD;uBAA6C,CAAC;iBAC/B,CAAC;oBAGhB,CAAC;oBACW,CAAC;qBACmB,CAAC;;;;;;;;;gBAEjB,CAAC;sBAA0B,CAAC;;;;;qBAErB,CAAC;qBAA4C,CAAC;;;;;;;;;qBAEO,CAAC;6BAC1E,CAAC;;mBAAgE,CAAC;kBAAuB,CAAA;mBACxF,CAAC;gBAAmD,CAAC;gBAAsC,CAAC;uBAE/F,CAAD;iBAAuC,CAAC;oBAA0C,CAAC;oBAClF,CAAF;qBAA2C,CAAC;;;;;;;;;;;gBAGW,CAAC;sBAA0B,CAAC;;;;;qBAC+C,CAAC;qBAC9F,CAAC;;;;;;;;;qBACuG,CAAC;6BACtG,CAAC;;mBAAgE,CAAC;kBAAsB,CAAC;mBACrG,CAAC;gBAAmD,CAAC;gBAAsC,CAAC;uBAA6C,CAAC;iBACrI,CAAC;oBAA0C,CAAC;oBAA0C,CAAC;qBAA2C,CAAC;;;;;;;;;;;;;;OAiEnK,CAAC;AAIF,eAAO,MAAM,qBAAqB;;;;;;;;aA/RhC,CAAD;cACa,CAAC;eAEF,CAAC;;;aAIV,CAAC;cACe,CAAC;eAEd,CAAC;;;;;;;;;;;;;;;;;;;aAmCc,CAAC;cACQ,CAAC;eACvB,CAAA;;;;;;;;;;;;;;;;;;;aASc,CAAC;cACf,CAAC;eAAuC,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;aAzDhD,CAAD;cACa,CAAC;eAEF,CAAC;;;aAIV,CAAC;cACe,CAAC;eAEd,CAAC;;;;;;;;;;;;;;;;;;;aAmCc,CAAC;cACQ,CAAC;eACvB,CAAA;;;;;;;;;;;;;;;;;;;aASc,CAAC;cACf,CAAC;eAAuC,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;4hBA+ajD,CAAC"}
@@ -14,7 +14,7 @@ import { LayerControllerSubscriber } from '@vitessce/layer-controller';
14
14
  import { LayerControllerBetaSubscriber } from '@vitessce/layer-controller-beta';
15
15
  import { StatusSubscriber } from '@vitessce/status';
16
16
  import { HiGlassSubscriber, GenomicProfilesSubscriber } from '@vitessce/genomic-profiles';
17
- import { CellSetExpressionPlotSubscriber, CellSetSizesPlotSubscriber, ExpressionHistogramSubscriber, FeatureBarPlotSubscriber, } from '@vitessce/statistical-plots';
17
+ import { CellSetExpressionPlotSubscriber, CellSetSizesPlotSubscriber, ExpressionHistogramSubscriber, DotPlotSubscriber, FeatureBarPlotSubscriber, } from '@vitessce/statistical-plots';
18
18
  // Register file type plugins
19
19
  import {
20
20
  // CSV
@@ -73,6 +73,7 @@ export const baseViewTypes = [
73
73
  makeViewType(ViewType.FEATURE_BAR_PLOT, FeatureBarPlotSubscriber),
74
74
  makeViewType('higlass', HiGlassSubscriber),
75
75
  makeViewType(ViewType.GENOMIC_PROFILES, GenomicProfilesSubscriber),
76
+ makeViewType(ViewType.DOT_PLOT, DotPlotSubscriber),
76
77
  ];
77
78
  export const baseFileTypes = [
78
79
  // All CSV file types
@@ -219,6 +220,7 @@ export const baseCoordinationTypes = [
219
220
  new PluginCoordinationType(CoordinationType.FEATURE_SELECTION, null, z.array(z.string()).nullable()),
220
221
  new PluginCoordinationType(CoordinationType.FEATURE_VALUE_TRANSFORM, null, z.enum(['log1p', 'arcsinh']).nullable()),
221
222
  new PluginCoordinationType(CoordinationType.FEATURE_VALUE_TRANSFORM_COEFFICIENT, 1, z.number()),
223
+ new PluginCoordinationType(CoordinationType.FEATURE_VALUE_POSITIVITY_THRESHOLD, 0, z.number()),
222
224
  new PluginCoordinationType(CoordinationType.TOOLTIPS_VISIBLE, true, z.boolean()),
223
225
  new PluginCoordinationType(CoordinationType.FEATURE_VALUE_COLORMAP, 'plasma', z.string().nullable()),
224
226
  new PluginCoordinationType(CoordinationType.FEATURE_VALUE_COLORMAP_RANGE, [0.0, 1.0], z.array(z.number()).length(2)),
@@ -269,6 +271,17 @@ export const baseCoordinationTypes = [
269
271
  new PluginCoordinationType(CoordinationType.SPATIAL_CHANNEL_LABELS_VISIBLE, true, z.boolean()),
270
272
  new PluginCoordinationType(CoordinationType.SPATIAL_CHANNEL_LABELS_ORIENTATION, 'vertical', z.enum(['vertical', 'horizontal'])),
271
273
  new PluginCoordinationType(CoordinationType.SPATIAL_CHANNEL_LABEL_SIZE, 14, z.number()),
272
- new PluginCoordinationType(CoordinationType.SAMPLE_TYPE, null, z.string().nullable()),
273
- new PluginCoordinationType(CoordinationType.SAMPLE_SET_SELECTION, null, z.array(z.string()).nullable()),
274
+ new PluginCoordinationType(CoordinationType.SAMPLE_TYPE, 'sample', z.string().nullable()),
275
+ // TODO: remove one array level and use multi-coordination for sampleSetSelection?
276
+ new PluginCoordinationType(CoordinationType.SAMPLE_SET_SELECTION, null, z.array(z.array(z.string())).nullable()),
277
+ new PluginCoordinationType(CoordinationType.SAMPLE_SET_COLOR, null, z.array(z.object({
278
+ path: obsSetPath,
279
+ color: rgbArray,
280
+ })).nullable()),
281
+ new PluginCoordinationType(CoordinationType.EMBEDDING_POINTS_VISIBLE, true, z.boolean()),
282
+ new PluginCoordinationType(CoordinationType.EMBEDDING_CONTOURS_VISIBLE, false, z.boolean()),
283
+ new PluginCoordinationType(CoordinationType.EMBEDDING_CONTOURS_FILLED, true, z.boolean()),
284
+ new PluginCoordinationType(CoordinationType.EMBEDDING_CONTOUR_PERCENTILES, null, z.array(z.number()).nullable()),
285
+ new PluginCoordinationType(CoordinationType.CONTOUR_COLOR_ENCODING, 'cellSetSelection', z.enum(['cellSetSelection', 'sampleSetSelection', 'contourColor'])),
286
+ new PluginCoordinationType(CoordinationType.CONTOUR_COLOR, null, rgbArray.nullable()),
274
287
  ];
@@ -1,5 +1,5 @@
1
1
  export { Vitessce } from './Vitessce.js';
2
- export { PluginFileType, PluginViewType, PluginCoordinationType, PluginJointFileType, } from '@vitessce/plugins';
2
+ export { PluginFileType, PluginViewType, PluginCoordinationType, PluginJointFileType, PluginAsyncFunction, } from '@vitessce/plugins';
3
3
  export { z } from '@vitessce/schemas';
4
4
  export { useCoordination } from '@vitessce/vit-s';
5
5
  //# sourceMappingURL=index.d.ts.map
@@ -1 +1 @@
1
- {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AACzC,OAAO,EACL,cAAc,EACd,cAAc,EACd,sBAAsB,EACtB,mBAAmB,GACpB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EAAE,CAAC,EAAE,MAAM,mBAAmB,CAAC;AACtC,OAAO,EAAE,eAAe,EAAE,MAAM,iBAAiB,CAAC"}
1
+ {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AACzC,OAAO,EACL,cAAc,EACd,cAAc,EACd,sBAAsB,EACtB,mBAAmB,EACnB,mBAAmB,GACpB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EAAE,CAAC,EAAE,MAAM,mBAAmB,CAAC;AACtC,OAAO,EAAE,eAAe,EAAE,MAAM,iBAAiB,CAAC"}
package/dist-tsc/index.js CHANGED
@@ -1,4 +1,4 @@
1
1
  export { Vitessce } from './Vitessce.js';
2
- export { PluginFileType, PluginViewType, PluginCoordinationType, PluginJointFileType, } from '@vitessce/plugins';
2
+ export { PluginFileType, PluginViewType, PluginCoordinationType, PluginJointFileType, PluginAsyncFunction, } from '@vitessce/plugins';
3
3
  export { z } from '@vitessce/schemas';
4
4
  export { useCoordination } from '@vitessce/vit-s';
@@ -22,7 +22,7 @@ export declare function expandMoleculesJson(fileDef: legacyFileDefSchema): {
22
22
  referrer?: string | undefined;
23
23
  integrity?: string | undefined;
24
24
  } | undefined;
25
- type?: string | undefined;
25
+ type?: string;
26
26
  }[];
27
27
  export declare function expandExpressionMatrixZarr(fileDef: legacyFileDefSchema): {
28
28
  fileType: string;
@@ -45,7 +45,7 @@ export declare function expandExpressionMatrixZarr(fileDef: legacyFileDefSchema)
45
45
  referrer?: string | undefined;
46
46
  integrity?: string | undefined;
47
47
  } | undefined;
48
- type?: string | undefined;
48
+ type?: string;
49
49
  }[];
50
50
  export declare function expandRasterJson(fileDef: legacyFileDefSchema): {
51
51
  fileType: string;
@@ -64,7 +64,7 @@ export declare function expandRasterJson(fileDef: legacyFileDefSchema): {
64
64
  integrity?: string | undefined;
65
65
  } | undefined;
66
66
  coordinationValues?: Record<string, string> | undefined;
67
- type?: string | undefined;
67
+ type?: string;
68
68
  }[];
69
69
  export declare function expandRasterOmeZarr(fileDef: legacyFileDefSchema): {
70
70
  fileType: string;
@@ -83,7 +83,7 @@ export declare function expandRasterOmeZarr(fileDef: legacyFileDefSchema): {
83
83
  integrity?: string | undefined;
84
84
  } | undefined;
85
85
  coordinationValues?: Record<string, string> | undefined;
86
- type?: string | undefined;
86
+ type?: string;
87
87
  }[];
88
88
  export declare function expandCellSetsJson(fileDef: legacyFileDefSchema): {
89
89
  fileType: string;
@@ -104,7 +104,7 @@ export declare function expandCellSetsJson(fileDef: legacyFileDefSchema): {
104
104
  referrer?: string | undefined;
105
105
  integrity?: string | undefined;
106
106
  } | undefined;
107
- type?: string | undefined;
107
+ type?: string;
108
108
  }[];
109
109
  export declare function expandCellsJson(fileDef: legacyFileDefSchema): any[];
110
110
  export declare function expandClustersJson(fileDef: legacyFileDefSchema): {
@@ -128,7 +128,7 @@ export declare function expandClustersJson(fileDef: legacyFileDefSchema): {
128
128
  referrer?: string | undefined;
129
129
  integrity?: string | undefined;
130
130
  } | undefined;
131
- type?: string | undefined;
131
+ type?: string;
132
132
  }[];
133
133
  export declare function expandGenesJson(fileDef: legacyFileDefSchema): {
134
134
  fileType: string;
@@ -151,7 +151,7 @@ export declare function expandGenesJson(fileDef: legacyFileDefSchema): {
151
151
  referrer?: string | undefined;
152
152
  integrity?: string | undefined;
153
153
  } | undefined;
154
- type?: string | undefined;
154
+ type?: string;
155
155
  }[];
156
156
  export declare function expandAnndataCellsZarr(fileDef: legacyFileDefSchema): any[];
157
157
  export declare function expandAnndataCellSetsZarr(fileDef: legacyFileDefSchema): {
@@ -1 +1 @@
1
- {"version":3,"file":"joint-file-types-legacy.d.ts","sourceRoot":"","sources":["../src/joint-file-types-legacy.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAC7B,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,mBAAmB,CAAC;AAG7D,KAAK,mBAAmB,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC,GAAG;IAC/D,IAAI,CAAC,EAAE,MAAM,CAAC;CACf,CAAC;AAEF,wBAAgB,mBAAmB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;IAkB/D;AAED,wBAAgB,0BAA0B,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;;;IAgBtE;AAED,wBAAgB,gBAAgB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;IAiB5D;AAED,wBAAgB,mBAAmB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;IAS/D;AAED,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;IAY9D;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,mBAAmB,SA0C3D;AAED,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;;;IAgB9D;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;;;IAgB3D;AAeD,wBAAgB,sBAAsB,CAAC,OAAO,EAAE,mBAAmB,SAkDlE;AAED,wBAAgB,yBAAyB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;IAiBrE;AAED,wBAAgB,iCAAiC,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;KA6B7E"}
1
+ {"version":3,"file":"joint-file-types-legacy.d.ts","sourceRoot":"","sources":["../src/joint-file-types-legacy.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAC7B,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,mBAAmB,CAAC;AAG7D,KAAK,mBAAmB,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC,GAAG;IAC/D,IAAI,CAAC,EAAE,MAAM,CAAC;CACf,CAAC;AAEF,wBAAgB,mBAAmB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;cAoRq23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;WAvR1t4G,MAAM;IAqBd;AAED,wBAAgB,0BAA0B,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;cAgQ813G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;WAvR1t4G,MAAM;IAuCd;AAED,wBAAgB,gBAAgB,CAAC,OAAO,EAAE,mBAAmB;;;;;;cA8Ow23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;;WAvR1t4G,MAAM;IA0Dd;AAED,wBAAgB,mBAAmB,CAAC,OAAO,EAAE,mBAAmB;;;;;;cA2Nq23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;;WAvR1t4G,MAAM;IAqEd;AAED,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;cAgNs23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;WAvR1t4G,MAAM;IAmFd;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,mBAAmB,SA0C3D;AAED,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;cAsJs23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;WAvR1t4G,MAAM;IAiJd;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;cAoIy23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;WAvR1t4G,MAAM;IAmKd;AAeD,wBAAgB,sBAAsB,CAAC,OAAO,EAAE,mBAAmB,SAkDlE;AAED,wBAAgB,yBAAyB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;IAiBrE;AAED,wBAAgB,iCAAiC,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;KA6B7E"}
@@ -9,7 +9,7 @@ export declare function expandSpatialdataZarr(fileDef: z.infer<typeof latestFile
9
9
  featureType: string;
10
10
  featureValueType: string;
11
11
  };
12
- url?: string | undefined;
12
+ url?: string;
13
13
  requestInit?: any;
14
14
  } | {
15
15
  fileType: string;
@@ -17,7 +17,7 @@ export declare function expandSpatialdataZarr(fileDef: z.infer<typeof latestFile
17
17
  coordinationValues: {
18
18
  obsType: string;
19
19
  };
20
- url?: string | undefined;
20
+ url?: string;
21
21
  requestInit?: any;
22
22
  } | {
23
23
  fileType: string;
@@ -25,7 +25,7 @@ export declare function expandSpatialdataZarr(fileDef: z.infer<typeof latestFile
25
25
  coordinationValues: {
26
26
  featureType: string;
27
27
  };
28
- url?: string | undefined;
28
+ url?: string;
29
29
  requestInit?: any;
30
30
  })[];
31
31
  //# sourceMappingURL=joint-file-types.d.ts.map
@@ -1 +1 @@
1
- {"version":3,"file":"joint-file-types.d.ts","sourceRoot":"","sources":["../src/joint-file-types.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAC7B,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,mBAAmB,CAAC;AA0B7D,wBAAgB,iBAAiB,CAAC,OAAO,EAAE,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC,SAwK7E;AAED,wBAAgB,qBAAqB,CAAC,OAAO,EAAE,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;KA4EjF"}
1
+ {"version":3,"file":"joint-file-types.d.ts","sourceRoot":"","sources":["../src/joint-file-types.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAC7B,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,mBAAmB,CAAC;AA0B7D,wBAAgB,iBAAiB,CAAC,OAAO,EAAE,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC,SAmL7E;AAED,wBAAgB,qBAAqB,CAAC,OAAO,EAAE,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC;;;;;;;;UA3M1E,MAAM;kBACE,GAAG;;;;;;;UADX,MAAM;kBACE,GAAG;;;;;;;UADX,MAAM;kBACE,GAAG;KAsRlB"}
@@ -174,6 +174,17 @@ export function expandAnndataZarr(fileDef) {
174
174
  featureLabelsType: baseFileDef.coordinationValues.featureLabelsType,
175
175
  },
176
176
  }]) : []),
177
+ // sampleEdges
178
+ ...(options.sampleEdges ? [{
179
+ ...baseFileDef,
180
+ fileType: getFileType(FileType.SAMPLE_EDGES_ANNDATA_ZARR),
181
+ options: options.sampleEdges,
182
+ coordinationValues: {
183
+ ...extraCoordinationValues,
184
+ obsType: baseFileDef.coordinationValues.obsType,
185
+ sampleType: fileDef.coordinationValues?.sampleType || 'sample',
186
+ },
187
+ }] : []),
177
188
  ];
178
189
  }
179
190
  export function expandSpatialdataZarr(fileDef) {
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@vitessce/all",
3
- "version": "3.4.6",
3
+ "version": "3.4.8",
4
4
  "author": "Gehlenborg Lab",
5
5
  "homepage": "http://vitessce.io",
6
6
  "repository": {
@@ -18,29 +18,29 @@
18
18
  "dependencies": {
19
19
  "@material-ui/core": "~4.12.3",
20
20
  "zod": "^3.21.4",
21
- "@vitessce/constants-internal": "3.4.6",
22
- "@vitessce/csv": "3.4.6",
23
- "@vitessce/description": "3.4.6",
24
- "@vitessce/feature-list": "3.4.6",
25
- "@vitessce/genomic-profiles": "3.4.6",
26
- "@vitessce/heatmap": "3.4.6",
27
- "@vitessce/json": "3.4.6",
28
- "@vitessce/glb": "3.4.6",
29
- "@vitessce/layer-controller-beta": "3.4.6",
30
- "@vitessce/layer-controller": "3.4.6",
31
- "@vitessce/obs-sets-manager": "3.4.6",
32
- "@vitessce/ome-tiff": "3.4.6",
33
- "@vitessce/plugins": "3.4.6",
34
- "@vitessce/scatterplot-embedding": "3.4.6",
35
- "@vitessce/schemas": "3.4.6",
36
- "@vitessce/spatial": "3.4.6",
37
- "@vitessce/scatterplot-gating": "3.4.6",
38
- "@vitessce/statistical-plots": "3.4.6",
39
- "@vitessce/spatial-beta": "3.4.6",
40
- "@vitessce/status": "3.4.6",
41
- "@vitessce/vit-s": "3.4.6",
42
- "@vitessce/spatial-three": "3.4.6",
43
- "@vitessce/zarr": "3.4.6"
21
+ "@vitessce/constants-internal": "3.4.8",
22
+ "@vitessce/csv": "3.4.8",
23
+ "@vitessce/description": "3.4.8",
24
+ "@vitessce/feature-list": "3.4.8",
25
+ "@vitessce/genomic-profiles": "3.4.8",
26
+ "@vitessce/heatmap": "3.4.8",
27
+ "@vitessce/glb": "3.4.8",
28
+ "@vitessce/json": "3.4.8",
29
+ "@vitessce/layer-controller": "3.4.8",
30
+ "@vitessce/layer-controller-beta": "3.4.8",
31
+ "@vitessce/obs-sets-manager": "3.4.8",
32
+ "@vitessce/ome-tiff": "3.4.8",
33
+ "@vitessce/plugins": "3.4.8",
34
+ "@vitessce/scatterplot-embedding": "3.4.8",
35
+ "@vitessce/scatterplot-gating": "3.4.8",
36
+ "@vitessce/schemas": "3.4.8",
37
+ "@vitessce/spatial": "3.4.8",
38
+ "@vitessce/spatial-beta": "3.4.8",
39
+ "@vitessce/statistical-plots": "3.4.8",
40
+ "@vitessce/status": "3.4.8",
41
+ "@vitessce/vit-s": "3.4.8",
42
+ "@vitessce/zarr": "3.4.8",
43
+ "@vitessce/spatial-three": "3.4.8"
44
44
  },
45
45
  "devDependencies": {
46
46
  "@types/react": "^18.0.28",
package/src/Vitessce.tsx CHANGED
@@ -22,6 +22,7 @@ export function Vitessce(props: any) {
22
22
  pluginFileTypes: pluginFileTypesProp,
23
23
  pluginCoordinationTypes: pluginCoordinationTypesProp,
24
24
  pluginJointFileTypes: pluginJointFileTypesProp,
25
+ pluginAsyncFunctions,
25
26
  } = props;
26
27
 
27
28
  // If config.uid exists, then use it for hook dependencies to detect changes
@@ -64,6 +65,7 @@ export function Vitessce(props: any) {
64
65
  ...baseCoordinationTypes, ...(pluginCoordinationTypesProp || []),
65
66
  ]), [pluginCoordinationTypesProp]);
66
67
 
68
+ // TODO: merge with a set of "base" async functions
67
69
 
68
70
  return (
69
71
  <VitS
@@ -73,6 +75,7 @@ export function Vitessce(props: any) {
73
75
  fileTypes={mergedPluginFileTypes}
74
76
  jointFileTypes={mergedPluginJointFileTypes}
75
77
  coordinationTypes={mergedPluginCoordinationTypes}
78
+ asyncFunctions={pluginAsyncFunctions}
76
79
  warning={(success ? null : configOrWarning)}
77
80
  />
78
81
  );