@vitessce/all 3.4.6 → 3.4.8

package/dist/index.js

@@ -1,13 +1,14 @@
-import { b3, b1, b4, b2, b0, b5 } from "./index-83f9cce3.js";
+import { b5, b3, b1, b4, b2, b0, b6 } from "./index-ebba1e3d.js";
 import { useCoordination } from "@vitessce/vit-s";
 import "react";
 import "react-dom";
 export {
+  b5 as PluginAsyncFunction,
   b3 as PluginCoordinationType,
   b1 as PluginFileType,
   b4 as PluginJointFileType,
   b2 as PluginViewType,
   b0 as Vitessce,
   useCoordination,
-  b5 as z
+  b6 as z
 };

package/dist/{jpeg-f66aaefd.js → jpeg-4ea25d50.js}

@@ -1,4 +1,4 @@
-import { aP as BaseDecoder } from "./index-83f9cce3.js";
+import { aP as BaseDecoder } from "./index-ebba1e3d.js";
 import "react";
 import "@vitessce/vit-s";
 import "react-dom";

package/dist/{lerc-741970d7.js → lerc-6dc56a5a.js}

@@ -1,5 +1,5 @@
 import { i as inflate_1 } from "./pako.esm-68f84e2a.js";
-import { g as getDefaultExportFromCjs, aP as BaseDecoder, aQ as LercParameters, aR as LercAddCompression } from "./index-83f9cce3.js";
+import { g as getDefaultExportFromCjs, aP as BaseDecoder, aQ as LercParameters, aR as LercAddCompression } from "./index-ebba1e3d.js";
 import "react";
 import "@vitessce/vit-s";
 import "react-dom";

package/dist/{lzw-a04e4522.js → lzw-13b6f62e.js}

@@ -1,4 +1,4 @@
-import { aP as BaseDecoder } from "./index-83f9cce3.js";
+import { aP as BaseDecoder } from "./index-ebba1e3d.js";
 import "react";
 import "@vitessce/vit-s";
 import "react-dom";

package/dist/{packbits-b5b8f747.js → packbits-bb6a3ee0.js}

@@ -1,4 +1,4 @@
-import { aP as BaseDecoder } from "./index-83f9cce3.js";
+import { aP as BaseDecoder } from "./index-ebba1e3d.js";
 import "react";
 import "@vitessce/vit-s";
 import "react-dom";

package/dist/{raw-15b0c869.js → raw-478626a5.js}

@@ -1,4 +1,4 @@
-import { aP as BaseDecoder } from "./index-83f9cce3.js";
+import { aP as BaseDecoder } from "./index-ebba1e3d.js";
 import "react";
 import "@vitessce/vit-s";
 import "react-dom";

package/dist/{troika-three-text.esm-8933bcf9.js → troika-three-text.esm-3d1f6283.js}

@@ -1,4 +1,4 @@
-import { aC as UniformsUtils, aW as MeshDepthMaterial, aX as RGBADepthPacking, aY as MeshDistanceMaterial, aZ as ShaderChunk, T as Texture, E as LinearFilter, ax as InstancedBufferGeometry, ao as Sphere, an as Box3, aH as BackSide, Y as DoubleSide, a_ as InstancedBufferAttribute, V as Vector2, aE as Vector4, h as Color, aJ as Matrix3, a0 as Mesh, ai as FrontSide, a$ as PlaneGeometry, f as BufferGeometry, ay as Float32BufferAttribute, t as MeshBasicMaterial, k as Matrix4, b as Vector3 } from "./index-83f9cce3.js";
+import { aB as UniformsUtils, aW as MeshDepthMaterial, aX as RGBADepthPacking, aY as MeshDistanceMaterial, aZ as ShaderChunk, T as Texture, Z as LinearFilter, aw as InstancedBufferGeometry, au as Sphere, at as Box3, aH as BackSide, a4 as DoubleSide, a_ as InstancedBufferAttribute, V as Vector2, aD as Vector4, h as Color, aJ as Matrix3, a7 as Mesh, ao as FrontSide, a$ as PlaneGeometry, f as BufferGeometry, ax as Float32BufferAttribute, y as MeshBasicMaterial, k as Matrix4, b as Vector3 } from "./index-ebba1e3d.js";
 import "react";
 import "@vitessce/vit-s";
 import "react-dom";

package/dist/{webimage-c497d392.js → webimage-f6a8e0e0.js}

@@ -1,4 +1,4 @@
-import { aP as BaseDecoder } from "./index-83f9cce3.js";
+import { aP as BaseDecoder } from "./index-ebba1e3d.js";
 import "react";
 import "@vitessce/vit-s";
 import "react-dom";

package/dist-tsc/Vitessce.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Vitessce.d.ts","sourceRoot":"","sources":["../src/Vitessce.tsx"],"names":[],"mappings":"AAgBA,wBAAgB,QAAQ,CAAC,KAAK,EAAE,GAAG,8CA8DlC"}
+{"version":3,"file":"Vitessce.d.ts","sourceRoot":"","sources":["../src/Vitessce.tsx"],"names":[],"mappings":"AAgBA,wBAAgB,QAAQ,CAAC,KAAK,EAAE,GAAG,8CAiElC"}

package/dist-tsc/Vitessce.js

@@ -5,7 +5,7 @@ import { VitS, logConfig, } from '@vitessce/vit-s';
 import { upgradeAndParse, } from '@vitessce/schemas';
 import { baseViewTypes, baseFileTypes, baseJointFileTypes, baseCoordinationTypes, } from './base-plugins.js';
 export function Vitessce(props) {
-    const { config, onConfigUpgrade, pluginViewTypes: pluginViewTypesProp, pluginFileTypes: pluginFileTypesProp, pluginCoordinationTypes: pluginCoordinationTypesProp, pluginJointFileTypes: pluginJointFileTypesProp, } = props;
+    const { config, onConfigUpgrade, pluginViewTypes: pluginViewTypesProp, pluginFileTypes: pluginFileTypesProp, pluginCoordinationTypes: pluginCoordinationTypesProp, pluginJointFileTypes: pluginJointFileTypesProp, pluginAsyncFunctions, } = props;
     // If config.uid exists, then use it for hook dependencies to detect changes
     // (controlled component case). If not, then use the config object itself
     // and assume the un-controlled component case.
@@ -41,5 +41,6 @@ export function Vitessce(props) {
     const mergedPluginCoordinationTypes = useMemo(() => ([
         ...baseCoordinationTypes, ...(pluginCoordinationTypesProp || []),
     ]), [pluginCoordinationTypesProp]);
-    return (_jsx(VitS, { ...props, config: configOrWarning, viewTypes: mergedPluginViewTypes, fileTypes: mergedPluginFileTypes, jointFileTypes: mergedPluginJointFileTypes, coordinationTypes: mergedPluginCoordinationTypes, warning: (success ? null : configOrWarning) }));
+    // TODO: merge with a set of "base" async functions
+    return (_jsx(VitS, { ...props, config: configOrWarning, viewTypes: mergedPluginViewTypes, fileTypes: mergedPluginFileTypes, jointFileTypes: mergedPluginJointFileTypes, coordinationTypes: mergedPluginCoordinationTypes, asyncFunctions: pluginAsyncFunctions, warning: (success ? null : configOrWarning) }));
 }

package/dist-tsc/base-plugins.d.ts

@@ -121,6 +121,13 @@ export declare const baseJointFileTypes: (PluginJointFileType<z.ZodObject<{
         embeddingType: string;
         dims?: number[] | undefined;
     }>, "many">]>>;
+    sampleEdges: z.ZodOptional<z.ZodObject<{
+        path: z.ZodString;
+    }, "strip", z.ZodTypeAny, {
+        path: string;
+    }, {
+        path: string;
+    }>>;
 }, "strip", z.ZodTypeAny, {
     obsLabels?: {
         path: string;
@@ -167,6 +174,9 @@ export declare const baseJointFileTypes: (PluginJointFileType<z.ZodObject<{
         embeddingType: string;
         dims?: number[] | undefined;
     }[] | undefined;
+    sampleEdges?: {
+        path: string;
+    } | undefined;
 }, {
     obsLabels?: {
         path: string;
@@ -213,6 +223,9 @@ export declare const baseJointFileTypes: (PluginJointFileType<z.ZodObject<{
         embeddingType: string;
         dims?: number[] | undefined;
     }[] | undefined;
+    sampleEdges?: {
+        path: string;
+    } | undefined;
 }>> | PluginJointFileType<z.ZodObject<{
     image: z.ZodOptional<z.ZodObject<{
         coordinateTransformations: z.ZodOptional<z.ZodArray<z.ZodUnion<[z.ZodObject<{
@@ -920,26 +933,26 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
         name: string;
         color?: number[] | undefined;
     } & {
-        children: (({
+        children: Array<({
             name: string;
             color?: number[] | undefined;
         } & any) | {
             set: [string, number | null][];
             name: string;
             color?: number[] | undefined;
-        })[];
+        }>;
     }, z.ZodTypeDef, {
         name: string;
         color?: number[] | undefined;
     } & {
-        children: (({
+        children: Array<({
             name: string;
             color?: number[] | undefined;
         } & any) | {
             set: [string, number | null][];
             name: string;
             color?: number[] | undefined;
-        })[];
+        }>;
     }>, "many">;
 }, "strip", z.ZodTypeAny, {
     version: "0.1.3";
@@ -947,14 +960,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
         name: string;
         color?: number[] | undefined;
     } & {
-        children: (({
+        children: Array<({
             name: string;
             color?: number[] | undefined;
         } & any) | {
             set: [string, number | null][];
             name: string;
             color?: number[] | undefined;
-        })[];
+        }>;
     })[];
 }, {
     version: "0.1.3";
@@ -962,14 +975,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
         name: string;
         color?: number[] | undefined;
     } & {
-        children: (({
+        children: Array<({
             name: string;
             color?: number[] | undefined;
         } & any) | {
             set: [string, number | null][];
             name: string;
             color?: number[] | undefined;
-        })[];
+        }>;
     })[];
 }>, z.ZodObject<{
     version: z.ZodLiteral<"0.1.2">;
@@ -977,26 +990,26 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
         name: string;
         color?: number[] | undefined;
     } & {
-        children: (({
+        children: Array<({
             name: string;
             color?: number[] | undefined;
         } & any) | {
             set: string[];
             name: string;
             color?: number[] | undefined;
-        })[];
+        }>;
     }, z.ZodTypeDef, {
         name: string;
         color?: number[] | undefined;
     } & {
-        children: (({
+        children: Array<({
             name: string;
             color?: number[] | undefined;
         } & any) | {
             set: string[];
             name: string;
             color?: number[] | undefined;
-        })[];
+        }>;
     }>, "many">;
 }, "strip", z.ZodTypeAny, {
     version: "0.1.2";
@@ -1004,14 +1017,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
         name: string;
         color?: number[] | undefined;
     } & {
-        children: (({
+        children: Array<({
             name: string;
             color?: number[] | undefined;
         } & any) | {
             set: string[];
             name: string;
             color?: number[] | undefined;
-        })[];
+        }>;
     })[];
 }, {
     version: "0.1.2";
@@ -1019,14 +1032,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
         name: string;
         color?: number[] | undefined;
     } & {
-        children: (({
+        children: Array<({
             name: string;
             color?: number[] | undefined;
         } & any) | {
             set: string[];
             name: string;
             color?: number[] | undefined;
-        })[];
+        }>;
     })[];
 }>]>, {
     version: "0.1.3";
@@ -1034,14 +1047,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
         name: string;
         color?: number[] | undefined;
     } & {
-        children: (({
+        children: Array<({
             name: string;
             color?: number[] | undefined;
         } & any) | {
             set: [string, number | null][];
             name: string;
             color?: number[] | undefined;
-        })[];
+        }>;
     })[];
 }, {
     version: "0.1.2";
@@ -1049,14 +1062,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
         name: string;
         color?: number[] | undefined;
     } & {
-        children: (({
+        children: Array<({
             name: string;
             color?: number[] | undefined;
         } & any) | {
             set: string[];
             name: string;
             color?: number[] | undefined;
-        })[];
+        }>;
     })[];
 } | {
     version: "0.1.3";
@@ -1064,14 +1077,14 @@ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullabl
         name: string;
         color?: number[] | undefined;
     } & {
-        children: (({
+        children: Array<({
             name: string;
             color?: number[] | undefined;
         } & any) | {
             set: [string, number | null][];
             name: string;
             color?: number[] | undefined;
-        })[];
+        }>;
     })[];
-}>>> | PluginCoordinationType<z.ZodNullable<z.ZodUnion<[z.ZodNumber, z.ZodString]>>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodNumber, "many">>> | PluginCoordinationType<z.ZodNullable<z.ZodEnum<["BlackIsZero", "RGB"]>>> | PluginCoordinationType<z.ZodNullable<z.ZodEnum<["2D", "3D"]>>> | PluginCoordinationType<z.ZodEnum<["maximumIntensityProjection", "additive"]>> | PluginCoordinationType<z.ZodEnum<["vertical", "horizontal"]>>)[];
+}>>> | PluginCoordinationType<z.ZodNullable<z.ZodUnion<[z.ZodNumber, z.ZodString]>>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodNumber, "many">>> | PluginCoordinationType<z.ZodNullable<z.ZodEnum<["BlackIsZero", "RGB"]>>> | PluginCoordinationType<z.ZodNullable<z.ZodEnum<["2D", "3D"]>>> | PluginCoordinationType<z.ZodEnum<["maximumIntensityProjection", "additive"]>> | PluginCoordinationType<z.ZodEnum<["vertical", "horizontal"]>> | PluginCoordinationType<z.ZodEnum<["cellSetSelection", "sampleSetSelection", "contourColor"]>>)[];
 //# sourceMappingURL=base-plugins.d.ts.map

package/dist-tsc/base-plugins.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"base-plugins.d.ts","sourceRoot":"","sources":["../src/base-plugins.ts"],"names":[],"mappings":"AAUA,OAAO,EACL,cAAc,EACd,mBAAmB,EACnB,cAAc,EACd,sBAAsB,EACvB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,UAAU,EACV,UAAU,EACX,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EACL,CAAC,EA4CF,MAAM,mBAAmB,CAAC;AAmI3B,eAAO,MAAM,aAAa,kBAkBzB,CAAC;AAEF,eAAO,MAAM,aAAa,wDAqEzB,CAAC;AAEF,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;OAgB9B,CAAC;AAIF,eAAO,MAAM,qBAAqB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;4bAqLjC,CAAC"}
+{"version":3,"file":"base-plugins.d.ts","sourceRoot":"","sources":["../src/base-plugins.ts"],"names":[],"mappings":"AAUA,OAAO,EACL,cAAc,EACd,mBAAmB,EACnB,cAAc,EACd,sBAAsB,EACvB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,KAAK,EACV,UAAU,EACV,UAAU,EACX,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EACL,CAAC,EA4CF,MAAM,mBAAmB,CAAC;AAoI3B,eAAO,MAAM,aAAa,kBAmBzB,CAAC;AAEF,eAAO,MAAM,aAAa,wDAqEzB,CAAC;AAEF,eAAO,MAAM,kBAAkB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;yBAuDH,CAAC;gCAAsD,CAAC;;;yBAChB,CAAC;gCACxC,CAAC;;;;;;;;;iBAIF,CAAC;;;;iBAC0C,CAAC;;;;;;;YAGxD,CAAC;;;YAEZ,CAAC;;;;;;;YAUe,CAAC;;;YAGf,CAAC;;;;;;;YAIuC,CAAC;;;YACb,CAAC;;;;;;;;;;;;;;YASF,CAAC;;;YAIxB,CAAC;;;;;;;;YASa,CAAC;;;;YAGG,CAAC;;;;;;;;;;;;;;;;;;;;;;;;yBAe1B,CAAH;gCAAsD,CAAC;;;;;iBASpC,CAAC;;;;YAKP,CAAC;;;;YAGM,CAAC;;;;YAIf,CAAC;;;;;;;YAON,CAAD;;;;YAIK,CAAC;;;;;;;;;;;;;;;;;;;;yBAMqE,CAAC;gCAC9C,CAAC;;;;;iBAEjB,CAAC;;;;YACK,CAAC;;;;YACI,CAAC;;;;YACE,CAAC;;;;;;;YACkE,CAAC;;;;YACV,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;iCAWI,CAAC;;;;;;;;;;;iCAGb,CAAA;;;;;;;;;;;;;;;;;;;;;;;;yBAMD,CAAC;gCAC1D,CAAC;cAAoC,CAAC;;;yBACV,CAAC;gCACnC,CAAC;cAAoC,CAAC;;;;;;;iBAEkC,CAAC;;;iBACrB,CAAC;;;;;;;;;;;;qBAKmB,CAAC;;;;qBAEnE,CAAC;;;;;;qBAEoC,CAAC;;cAAiD,CAAC;iBAE1G,CAAA;;;;;qBAO0B,CAAC;;cAAiD,CAAC;iBACrD,CAAC;;;;;iCACiC,CAAC;;;;;;;;;;;;;;;yBAGR,CAAC;gCAEtC,CAAC;cAAoC,CAAC;;;;iBAAiG,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;iCAAmH,CAAC;;;;;;;;;;;;;;;yBAAwW,CAAC;gCAAsD,CAAC;cAAoC,CAAC;;;;iBAAiG,CAAC;;;;;;qBAAoM,CAAC;;cAAiD,CAAC;iBAAuC,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;sBAlbtyC,CAAC;;;;;qBAKpE,CAAC;qBACc,CAAC;;;;;;;;;qBAaxB,CAAA;6BAEK,CAAC;;sBAEE,CAAC;;;;;qBAUiB,CAAC;qBACM,CAAC;;;;;;;;;qBAQpC,CAAC;6BAGK,CAAC;;;;;;;;;;;;;kBAwBF,CAAC;mBAEW,CAAC;gBAEhB,CAAC;gBAEI,CAAC;uBAEN,CAAA;iBACsB,CAAC;oBAItB,CAAC;oBAGH,CAAC;qBAEa,CAAC;;kBAGb,CAAC;mBACY,CAAC;gBAEZ,CAAC;gBAEH,CAAC;uBACuB,CAAC;iBAEV,CAAC;oBAED,CAAC;oBAInB,CAFA;qBAC0C,CAAC;;;;;;gBAEsC,CAAC;sBAG5E,CAAC;;;;;qBAC2B,CAAA;qBAA4C,CAAC;;;;;;;;;qBAGqD,CAAC;6BAChI,CAAC;;mBACF,CAAC;kBACW,CAAC;mBAAyC,CAAC;gBAClD,CAAC;gBAAsC,CAAC;uBAA6C,CAAC;iBAI7F,CAAC;oBACW,CAAC;oBAA0C,CAAC;qBAClB,CAAC;;;;;;gBAEI,CAAC;sBACzB,CAAC;;;;;qBAGiC,CAAC;qBAClB,CAAC;;;;;;;;;qBAG6C,CAAC;6BAC1C,CAAC;;mBACJ,CAAC;kBAAsB,CAAC;mBACxC,CAAC;gBAClB,CAAC;gBACN,CAAD;uBAA6C,CAAC;iBAC/B,CAAC;oBAGhB,CAAC;oBACW,CAAC;qBACmB,CAAC;;;;;;;;;gBAEjB,CAAC;sBAA0B,CAAC;;;;;qBAErB,CAAC;qBAA4C,CAAC;;;;;;;;;qBAEO,CAAC;6BAC1E,CAAC;;mBAAgE,CAAC;kBAAuB,CAAA;mBACxF,CAAC;gBAAmD,CAAC;gBAAsC,CAAC;uBAE/F,CAAD;iBAAuC,CAAC;oBAA0C,CAAC;oBAClF,CAAF;qBAA2C,CAAC;;;;;;;;;;;gBAGW,CAAC;sBAA0B,CAAC;;;;;qBAC+C,CAAC;qBAC9F,CAAC;;;;;;;;;qBACuG,CAAC;6BACtG,CAAC;;mBAAgE,CAAC;kBAAsB,CAAC;mBACrG,CAAC;gBAAmD,CAAC;gBAAsC,CAAC;uBAA6C,CAAC;iBACrI,CAAC;oBAA0C,CAAC;oBAA0C,CAAC;qBAA2C,CAAC;;;;;;;;;;;;;;OAiEnK,CAAC;AAIF,eAAO,MAAM,qBAAqB;;;;;;;;aA/RhC,CAAD;cACa,CAAC;eAEF,CAAC;;;aAIV,CAAC;cACe,CAAC;eAEd,CAAC;;;;;;;;;;;;;;;;;;;aAmCc,CAAC;cACQ,CAAC;eACvB,CAAA;;;;;;;;;;;;;;;;;;;aASc,CAAC;cACf,CAAC;eAAuC,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;aAzDhD,CAAD;cACa,CAAC;eAEF,CAAC;;;aAIV,CAAC;cACe,CAAC;eAEd,CAAC;;;;;;;;;;;;;;;;;;;aAmCc,CAAC;cACQ,CAAC;eACvB,CAAA;;;;;;;;;;;;;;;;;;;aASc,CAAC;cACf,CAAC;eAAuC,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;4hBA+ajD,CAAC"}

package/dist-tsc/base-plugins.js

@@ -14,7 +14,7 @@ import { LayerControllerSubscriber } from '@vitessce/layer-controller';
 import { LayerControllerBetaSubscriber } from '@vitessce/layer-controller-beta';
 import { StatusSubscriber } from '@vitessce/status';
 import { HiGlassSubscriber, GenomicProfilesSubscriber } from '@vitessce/genomic-profiles';
-import { CellSetExpressionPlotSubscriber, CellSetSizesPlotSubscriber, ExpressionHistogramSubscriber, FeatureBarPlotSubscriber, } from '@vitessce/statistical-plots';
+import { CellSetExpressionPlotSubscriber, CellSetSizesPlotSubscriber, ExpressionHistogramSubscriber, DotPlotSubscriber, FeatureBarPlotSubscriber, } from '@vitessce/statistical-plots';
 // Register file type plugins
 import { 
 // CSV
@@ -73,6 +73,7 @@ export const baseViewTypes = [
     makeViewType(ViewType.FEATURE_BAR_PLOT, FeatureBarPlotSubscriber),
     makeViewType('higlass', HiGlassSubscriber),
     makeViewType(ViewType.GENOMIC_PROFILES, GenomicProfilesSubscriber),
+    makeViewType(ViewType.DOT_PLOT, DotPlotSubscriber),
 ];
 export const baseFileTypes = [
     // All CSV file types
@@ -219,6 +220,7 @@ export const baseCoordinationTypes = [
     new PluginCoordinationType(CoordinationType.FEATURE_SELECTION, null, z.array(z.string()).nullable()),
     new PluginCoordinationType(CoordinationType.FEATURE_VALUE_TRANSFORM, null, z.enum(['log1p', 'arcsinh']).nullable()),
     new PluginCoordinationType(CoordinationType.FEATURE_VALUE_TRANSFORM_COEFFICIENT, 1, z.number()),
+    new PluginCoordinationType(CoordinationType.FEATURE_VALUE_POSITIVITY_THRESHOLD, 0, z.number()),
     new PluginCoordinationType(CoordinationType.TOOLTIPS_VISIBLE, true, z.boolean()),
     new PluginCoordinationType(CoordinationType.FEATURE_VALUE_COLORMAP, 'plasma', z.string().nullable()),
     new PluginCoordinationType(CoordinationType.FEATURE_VALUE_COLORMAP_RANGE, [0.0, 1.0], z.array(z.number()).length(2)),
@@ -269,6 +271,17 @@ export const baseCoordinationTypes = [
     new PluginCoordinationType(CoordinationType.SPATIAL_CHANNEL_LABELS_VISIBLE, true, z.boolean()),
     new PluginCoordinationType(CoordinationType.SPATIAL_CHANNEL_LABELS_ORIENTATION, 'vertical', z.enum(['vertical', 'horizontal'])),
     new PluginCoordinationType(CoordinationType.SPATIAL_CHANNEL_LABEL_SIZE, 14, z.number()),
-    new PluginCoordinationType(CoordinationType.SAMPLE_TYPE, null, z.string().nullable()),
-    new PluginCoordinationType(CoordinationType.SAMPLE_SET_SELECTION, null, z.array(z.string()).nullable()),
+    new PluginCoordinationType(CoordinationType.SAMPLE_TYPE, 'sample', z.string().nullable()),
+    // TODO: remove one array level and use multi-coordination for sampleSetSelection?
+    new PluginCoordinationType(CoordinationType.SAMPLE_SET_SELECTION, null, z.array(z.array(z.string())).nullable()),
+    new PluginCoordinationType(CoordinationType.SAMPLE_SET_COLOR, null, z.array(z.object({
+        path: obsSetPath,
+        color: rgbArray,
+    })).nullable()),
+    new PluginCoordinationType(CoordinationType.EMBEDDING_POINTS_VISIBLE, true, z.boolean()),
+    new PluginCoordinationType(CoordinationType.EMBEDDING_CONTOURS_VISIBLE, false, z.boolean()),
+    new PluginCoordinationType(CoordinationType.EMBEDDING_CONTOURS_FILLED, true, z.boolean()),
+    new PluginCoordinationType(CoordinationType.EMBEDDING_CONTOUR_PERCENTILES, null, z.array(z.number()).nullable()),
+    new PluginCoordinationType(CoordinationType.CONTOUR_COLOR_ENCODING, 'cellSetSelection', z.enum(['cellSetSelection', 'sampleSetSelection', 'contourColor'])),
+    new PluginCoordinationType(CoordinationType.CONTOUR_COLOR, null, rgbArray.nullable()),
 ];

package/dist-tsc/index.d.ts

@@ -1,5 +1,5 @@
 export { Vitessce } from './Vitessce.js';
-export { PluginFileType, PluginViewType, PluginCoordinationType, PluginJointFileType, } from '@vitessce/plugins';
+export { PluginFileType, PluginViewType, PluginCoordinationType, PluginJointFileType, PluginAsyncFunction, } from '@vitessce/plugins';
 export { z } from '@vitessce/schemas';
 export { useCoordination } from '@vitessce/vit-s';
 //# sourceMappingURL=index.d.ts.map

package/dist-tsc/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AACzC,OAAO,EACL,cAAc,EACd,cAAc,EACd,sBAAsB,EACtB,mBAAmB,GACpB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EAAE,CAAC,EAAE,MAAM,mBAAmB,CAAC;AACtC,OAAO,EAAE,eAAe,EAAE,MAAM,iBAAiB,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,QAAQ,EAAE,MAAM,eAAe,CAAC;AACzC,OAAO,EACL,cAAc,EACd,cAAc,EACd,sBAAsB,EACtB,mBAAmB,EACnB,mBAAmB,GACpB,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EAAE,CAAC,EAAE,MAAM,mBAAmB,CAAC;AACtC,OAAO,EAAE,eAAe,EAAE,MAAM,iBAAiB,CAAC"}

package/dist-tsc/index.js

@@ -1,4 +1,4 @@
 export { Vitessce } from './Vitessce.js';
-export { PluginFileType, PluginViewType, PluginCoordinationType, PluginJointFileType, } from '@vitessce/plugins';
+export { PluginFileType, PluginViewType, PluginCoordinationType, PluginJointFileType, PluginAsyncFunction, } from '@vitessce/plugins';
 export { z } from '@vitessce/schemas';
 export { useCoordination } from '@vitessce/vit-s';

package/dist-tsc/joint-file-types-legacy.d.ts

@@ -22,7 +22,7 @@ export declare function expandMoleculesJson(fileDef: legacyFileDefSchema): {
         referrer?: string | undefined;
         integrity?: string | undefined;
     } | undefined;
-    type?: string | undefined;
+    type?: string;
 }[];
 export declare function expandExpressionMatrixZarr(fileDef: legacyFileDefSchema): {
     fileType: string;
@@ -45,7 +45,7 @@ export declare function expandExpressionMatrixZarr(fileDef: legacyFileDefSchema)
         referrer?: string | undefined;
         integrity?: string | undefined;
     } | undefined;
-    type?: string | undefined;
+    type?: string;
 }[];
 export declare function expandRasterJson(fileDef: legacyFileDefSchema): {
     fileType: string;
@@ -64,7 +64,7 @@ export declare function expandRasterJson(fileDef: legacyFileDefSchema): {
         integrity?: string | undefined;
     } | undefined;
     coordinationValues?: Record<string, string> | undefined;
-    type?: string | undefined;
+    type?: string;
 }[];
 export declare function expandRasterOmeZarr(fileDef: legacyFileDefSchema): {
     fileType: string;
@@ -83,7 +83,7 @@ export declare function expandRasterOmeZarr(fileDef: legacyFileDefSchema): {
         integrity?: string | undefined;
     } | undefined;
     coordinationValues?: Record<string, string> | undefined;
-    type?: string | undefined;
+    type?: string;
 }[];
 export declare function expandCellSetsJson(fileDef: legacyFileDefSchema): {
     fileType: string;
@@ -104,7 +104,7 @@ export declare function expandCellSetsJson(fileDef: legacyFileDefSchema): {
         referrer?: string | undefined;
         integrity?: string | undefined;
     } | undefined;
-    type?: string | undefined;
+    type?: string;
 }[];
 export declare function expandCellsJson(fileDef: legacyFileDefSchema): any[];
 export declare function expandClustersJson(fileDef: legacyFileDefSchema): {
@@ -128,7 +128,7 @@ export declare function expandClustersJson(fileDef: legacyFileDefSchema): {
         referrer?: string | undefined;
         integrity?: string | undefined;
     } | undefined;
-    type?: string | undefined;
+    type?: string;
 }[];
 export declare function expandGenesJson(fileDef: legacyFileDefSchema): {
     fileType: string;
@@ -151,7 +151,7 @@ export declare function expandGenesJson(fileDef: legacyFileDefSchema): {
         referrer?: string | undefined;
         integrity?: string | undefined;
     } | undefined;
-    type?: string | undefined;
+    type?: string;
 }[];
 export declare function expandAnndataCellsZarr(fileDef: legacyFileDefSchema): any[];
 export declare function expandAnndataCellSetsZarr(fileDef: legacyFileDefSchema): {

package/dist-tsc/joint-file-types-legacy.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"joint-file-types-legacy.d.ts","sourceRoot":"","sources":["../src/joint-file-types-legacy.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAC7B,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,mBAAmB,CAAC;AAG7D,KAAK,mBAAmB,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC,GAAG;IAC/D,IAAI,CAAC,EAAE,MAAM,CAAC;CACf,CAAC;AAEF,wBAAgB,mBAAmB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;IAkB/D;AAED,wBAAgB,0BAA0B,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;;;IAgBtE;AAED,wBAAgB,gBAAgB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;IAiB5D;AAED,wBAAgB,mBAAmB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;IAS/D;AAED,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;IAY9D;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,mBAAmB,SA0C3D;AAED,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;;;IAgB9D;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;;;IAgB3D;AAeD,wBAAgB,sBAAsB,CAAC,OAAO,EAAE,mBAAmB,SAkDlE;AAED,wBAAgB,yBAAyB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;IAiBrE;AAED,wBAAgB,iCAAiC,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;KA6B7E"}
+{"version":3,"file":"joint-file-types-legacy.d.ts","sourceRoot":"","sources":["../src/joint-file-types-legacy.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAC7B,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,mBAAmB,CAAC;AAG7D,KAAK,mBAAmB,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC,GAAG;IAC/D,IAAI,CAAC,EAAE,MAAM,CAAC;CACf,CAAC;AAEF,wBAAgB,mBAAmB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;cAoRq23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;WAvR1t4G,MAAM;IAqBd;AAED,wBAAgB,0BAA0B,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;cAgQ813G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;WAvR1t4G,MAAM;IAuCd;AAED,wBAAgB,gBAAgB,CAAC,OAAO,EAAE,mBAAmB;;;;;;cA8Ow23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;;WAvR1t4G,MAAM;IA0Dd;AAED,wBAAgB,mBAAmB,CAAC,OAAO,EAAE,mBAAmB;;;;;;cA2Nq23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;;WAvR1t4G,MAAM;IAqEd;AAED,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;cAgNs23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;WAvR1t4G,MAAM;IAmFd;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,mBAAmB,SA0C3D;AAED,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;cAsJs23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;WAvR1t4G,MAAM;IAiJd;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;cAoIy23G,CAAC;eAAqC,CAAC;YAA+C,CAAC;YAAkC,CAAC;mBAAyC,CAAC;aAAmC,CAAC;gBAAsC,CAAC;gBAAsC,CAAC;iBAAuC,CAAC;;WAvR1t4G,MAAM;IAmKd;AAeD,wBAAgB,sBAAsB,CAAC,OAAO,EAAE,mBAAmB,SAkDlE;AAED,wBAAgB,yBAAyB,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;IAiBrE;AAED,wBAAgB,iCAAiC,CAAC,OAAO,EAAE,mBAAmB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;KA6B7E"}

package/dist-tsc/joint-file-types.d.ts

@@ -9,7 +9,7 @@ export declare function expandSpatialdataZarr(fileDef: z.infer<typeof latestFile
         featureType: string;
         featureValueType: string;
     };
-    url?: string | undefined;
+    url?: string;
     requestInit?: any;
 } | {
     fileType: string;
@@ -17,7 +17,7 @@ export declare function expandSpatialdataZarr(fileDef: z.infer<typeof latestFile
     coordinationValues: {
         obsType: string;
     };
-    url?: string | undefined;
+    url?: string;
     requestInit?: any;
 } | {
     fileType: string;
@@ -25,7 +25,7 @@ export declare function expandSpatialdataZarr(fileDef: z.infer<typeof latestFile
     coordinationValues: {
         featureType: string;
     };
-    url?: string | undefined;
+    url?: string;
     requestInit?: any;
 })[];
 //# sourceMappingURL=joint-file-types.d.ts.map

package/dist-tsc/joint-file-types.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"joint-file-types.d.ts","sourceRoot":"","sources":["../src/joint-file-types.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAC7B,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,mBAAmB,CAAC;AA0B7D,wBAAgB,iBAAiB,CAAC,OAAO,EAAE,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC,SAwK7E;AAED,wBAAgB,qBAAqB,CAAC,OAAO,EAAE,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC;;;;;;;;;;;;;;;;;;;;;;;;;;KA4EjF"}
+{"version":3,"file":"joint-file-types.d.ts","sourceRoot":"","sources":["../src/joint-file-types.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAC7B,OAAO,KAAK,EAAE,mBAAmB,EAAE,MAAM,mBAAmB,CAAC;AA0B7D,wBAAgB,iBAAiB,CAAC,OAAO,EAAE,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC,SAmL7E;AAED,wBAAgB,qBAAqB,CAAC,OAAO,EAAE,CAAC,CAAC,KAAK,CAAC,OAAO,mBAAmB,CAAC;;;;;;;;UA3M1E,MAAM;kBACE,GAAG;;;;;;;UADX,MAAM;kBACE,GAAG;;;;;;;UADX,MAAM;kBACE,GAAG;KAsRlB"}

package/dist-tsc/joint-file-types.js

@@ -174,6 +174,17 @@ export function expandAnndataZarr(fileDef) {
                     featureLabelsType: baseFileDef.coordinationValues.featureLabelsType,
                 },
             }]) : []),
+        // sampleEdges
+        ...(options.sampleEdges ? [{
+                ...baseFileDef,
+                fileType: getFileType(FileType.SAMPLE_EDGES_ANNDATA_ZARR),
+                options: options.sampleEdges,
+                coordinationValues: {
+                    ...extraCoordinationValues,
+                    obsType: baseFileDef.coordinationValues.obsType,
+                    sampleType: fileDef.coordinationValues?.sampleType || 'sample',
+                },
+            }] : []),
     ];
 }
 export function expandSpatialdataZarr(fileDef) {

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vitessce/all",
-  "version": "3.4.6",
+  "version": "3.4.8",
   "author": "Gehlenborg Lab",
   "homepage": "http://vitessce.io",
   "repository": {
@@ -18,29 +18,29 @@
   "dependencies": {
     "@material-ui/core": "~4.12.3",
     "zod": "^3.21.4",
-    "@vitessce/constants-internal": "3.4.6",
-    "@vitessce/csv": "3.4.6",
-    "@vitessce/description": "3.4.6",
-    "@vitessce/feature-list": "3.4.6",
-    "@vitessce/genomic-profiles": "3.4.6",
-    "@vitessce/heatmap": "3.4.6",
-    "@vitessce/json": "3.4.6",
-    "@vitessce/glb": "3.4.6",
-    "@vitessce/layer-controller-beta": "3.4.6",
-    "@vitessce/layer-controller": "3.4.6",
-    "@vitessce/obs-sets-manager": "3.4.6",
-    "@vitessce/ome-tiff": "3.4.6",
-    "@vitessce/plugins": "3.4.6",
-    "@vitessce/scatterplot-embedding": "3.4.6",
-    "@vitessce/schemas": "3.4.6",
-    "@vitessce/spatial": "3.4.6",
-    "@vitessce/scatterplot-gating": "3.4.6",
-    "@vitessce/statistical-plots": "3.4.6",
-    "@vitessce/spatial-beta": "3.4.6",
-    "@vitessce/status": "3.4.6",
-    "@vitessce/vit-s": "3.4.6",
-    "@vitessce/spatial-three": "3.4.6",
-    "@vitessce/zarr": "3.4.6"
+    "@vitessce/constants-internal": "3.4.8",
+    "@vitessce/csv": "3.4.8",
+    "@vitessce/description": "3.4.8",
+    "@vitessce/feature-list": "3.4.8",
+    "@vitessce/genomic-profiles": "3.4.8",
+    "@vitessce/heatmap": "3.4.8",
+    "@vitessce/glb": "3.4.8",
+    "@vitessce/json": "3.4.8",
+    "@vitessce/layer-controller": "3.4.8",
+    "@vitessce/layer-controller-beta": "3.4.8",
+    "@vitessce/obs-sets-manager": "3.4.8",
+    "@vitessce/ome-tiff": "3.4.8",
+    "@vitessce/plugins": "3.4.8",
+    "@vitessce/scatterplot-embedding": "3.4.8",
+    "@vitessce/scatterplot-gating": "3.4.8",
+    "@vitessce/schemas": "3.4.8",
+    "@vitessce/spatial": "3.4.8",
+    "@vitessce/spatial-beta": "3.4.8",
+    "@vitessce/statistical-plots": "3.4.8",
+    "@vitessce/status": "3.4.8",
+    "@vitessce/vit-s": "3.4.8",
+    "@vitessce/zarr": "3.4.8",
+    "@vitessce/spatial-three": "3.4.8"
   },
   "devDependencies": {
     "@types/react": "^18.0.28",

package/src/Vitessce.tsx

@@ -22,6 +22,7 @@ export function Vitessce(props: any) {
     pluginFileTypes: pluginFileTypesProp,
     pluginCoordinationTypes: pluginCoordinationTypesProp,
     pluginJointFileTypes: pluginJointFileTypesProp,
+    pluginAsyncFunctions,
   } = props;
 
   // If config.uid exists, then use it for hook dependencies to detect changes
@@ -64,6 +65,7 @@ export function Vitessce(props: any) {
     ...baseCoordinationTypes, ...(pluginCoordinationTypesProp || []),
   ]), [pluginCoordinationTypesProp]);
 
+  // TODO: merge with a set of "base" async functions
 
   return (
     <VitS
@@ -73,6 +75,7 @@ export function Vitessce(props: any) {
       fileTypes={mergedPluginFileTypes}
       jointFileTypes={mergedPluginJointFileTypes}
       coordinationTypes={mergedPluginCoordinationTypes}
+      asyncFunctions={pluginAsyncFunctions}
       warning={(success ? null : configOrWarning)}
     />
   );