@vitessce/all 2.0.3 → 3.0.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (49) hide show
  1. package/dist/{deflate.8ace1ac4.mjs → deflate-475a23c9.js} +2 -2
  2. package/dist/hglib-76c1b0ad.js +138925 -0
  3. package/dist/{index.7dac8670.mjs → index-f48f3f08.js} +66958 -52713
  4. package/dist/index.js +12 -0
  5. package/dist/{jpeg.c8011e3a.mjs → jpeg-7f0b1b2c.js} +1 -1
  6. package/dist/{lerc.ccda5eb2.mjs → lerc-f7557585.js} +76 -5
  7. package/dist/{lzw.39876143.mjs → lzw-4d26ee71.js} +1 -1
  8. package/dist/{packbits.9e95d117.mjs → packbits-08efb7ce.js} +1 -1
  9. package/dist/{pako.esm.4b234125.mjs → pako.esm-68f84e2a.js} +97 -15
  10. package/dist/{raw.0279d74b.mjs → raw-3c2d82ff.js} +1 -1
  11. package/dist/{webimage.5ac7ce95.mjs → webimage-a7dde8d2.js} +1 -1
  12. package/dist-tsc/Vitessce.d.ts +2 -0
  13. package/dist-tsc/Vitessce.d.ts.map +1 -0
  14. package/dist-tsc/Vitessce.js +45 -0
  15. package/dist-tsc/base-plugins.d.ts +854 -0
  16. package/dist-tsc/base-plugins.d.ts.map +1 -0
  17. package/dist-tsc/base-plugins.js +191 -0
  18. package/dist-tsc/index.d.ts +4 -0
  19. package/dist-tsc/index.d.ts.map +1 -0
  20. package/dist-tsc/index.js +3 -2
  21. package/dist-tsc/joint-file-types-legacy.d.ts +226 -0
  22. package/dist-tsc/joint-file-types-legacy.d.ts.map +1 -0
  23. package/dist-tsc/joint-file-types-legacy.js +266 -0
  24. package/dist-tsc/joint-file-types-legacy.test.d.ts +2 -0
  25. package/dist-tsc/joint-file-types-legacy.test.d.ts.map +1 -0
  26. package/dist-tsc/joint-file-types-legacy.test.js +401 -0
  27. package/dist-tsc/joint-file-types.d.ts +4 -0
  28. package/dist-tsc/joint-file-types.d.ts.map +1 -0
  29. package/dist-tsc/joint-file-types.js +127 -0
  30. package/dist-tsc/joint-file-types.test.d.ts +2 -0
  31. package/dist-tsc/joint-file-types.test.d.ts.map +1 -0
  32. package/dist-tsc/joint-file-types.test.js +128 -0
  33. package/dist-tsc/latest-config-schema.test.d.ts +2 -0
  34. package/dist-tsc/latest-config-schema.test.d.ts.map +1 -0
  35. package/dist-tsc/latest-config-schema.test.js +19 -0
  36. package/package.json +37 -21
  37. package/src/Vitessce.tsx +79 -0
  38. package/src/base-plugins.ts +362 -0
  39. package/src/index.ts +8 -0
  40. package/src/joint-file-types-legacy.test.ts +413 -0
  41. package/src/joint-file-types-legacy.ts +284 -0
  42. package/src/joint-file-types.test.ts +132 -0
  43. package/src/joint-file-types.ts +142 -0
  44. package/src/latest-config-schema.test.ts +26 -0
  45. package/src/missing-types.d.ts +1 -0
  46. package/dist/hglib.1f1ea875.mjs +0 -130303
  47. package/dist/index.mjs +0 -11
  48. package/src/index.js +0 -7
  49. package/src/setup.js +0 -143
@@ -0,0 +1,854 @@
1
+ import { PluginFileType, PluginJointFileType, PluginViewType, PluginCoordinationType } from '@vitessce/plugins';
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+ import type { DataLoader, DataSource } from '@vitessce/plugins';
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+ import { z } from '@vitessce/schemas';
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+ export declare const baseViewTypes: PluginViewType[];
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+ export declare const baseFileTypes: PluginFileType<DataLoader, DataSource, z.ZodTypeAny>[];
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+ export declare const baseJointFileTypes: (PluginJointFileType<z.ZodObject<{
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+ obsLabels: z.ZodOptional<z.ZodUnion<[z.ZodObject<{
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+ path: z.ZodString;
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+ }, "strip", z.ZodTypeAny, {
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+ path: string;
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+ }, {
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+ path: string;
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+ }>, z.ZodArray<z.ZodObject<{
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+ path: z.ZodString;
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+ obsLabelsType: z.ZodString;
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+ }, "strip", z.ZodTypeAny, {
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+ path: string;
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+ obsLabelsType: string;
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+ }, {
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+ path: string;
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+ obsLabelsType: string;
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+ }>, "many">]>>;
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+ featureLabels: z.ZodOptional<z.ZodUnion<[z.ZodObject<{
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+ path: z.ZodString;
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+ }, "strip", z.ZodTypeAny, {
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+ path: string;
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+ }, {
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+ path: string;
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+ }>, z.ZodArray<z.ZodObject<{
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+ path: z.ZodString;
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+ featureLabelsType: z.ZodString;
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+ }, "strip", z.ZodTypeAny, {
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+ path: string;
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+ featureLabelsType: string;
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+ }, {
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+ path: string;
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+ featureLabelsType: string;
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+ }>, "many">]>>;
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+ obsFeatureMatrix: z.ZodOptional<z.ZodObject<{
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+ path: z.ZodString;
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+ featureFilterPath: z.ZodOptional<z.ZodString>;
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+ initialFeatureFilterPath: z.ZodOptional<z.ZodString>;
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+ }, "strip", z.ZodTypeAny, {
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+ path: string;
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+ featureFilterPath?: string | undefined;
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+ initialFeatureFilterPath?: string | undefined;
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+ }, {
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+ path: string;
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+ featureFilterPath?: string | undefined;
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+ initialFeatureFilterPath?: string | undefined;
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+ }>>;
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+ obsSets: z.ZodOptional<z.ZodArray<z.ZodObject<{
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+ name: z.ZodString;
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+ path: z.ZodUnion<[z.ZodString, z.ZodArray<z.ZodString, "many">]>;
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+ scorePath: z.ZodOptional<z.ZodString>;
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+ }, "strip", z.ZodTypeAny, {
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+ path: (string | string[]) & (string | string[] | undefined);
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+ name: string;
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+ scorePath?: string | undefined;
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+ }, {
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+ path: (string | string[]) & (string | string[] | undefined);
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+ name: string;
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+ scorePath?: string | undefined;
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+ }>, "many">>;
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+ obsLocations: z.ZodOptional<z.ZodObject<{
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+ path: z.ZodString;
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+ dims: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
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+ }, "strip", z.ZodTypeAny, {
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+ path: string;
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+ dims?: number[] | undefined;
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+ }, {
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+ path: string;
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+ dims?: number[] | undefined;
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+ }>>;
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+ obsSegmentations: z.ZodOptional<z.ZodObject<{
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+ path: z.ZodString;
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+ }, "strip", z.ZodTypeAny, {
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+ path: string;
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+ }, {
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+ path: string;
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+ }>>;
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+ obsEmbedding: z.ZodOptional<z.ZodUnion<[z.ZodObject<{
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+ path: z.ZodString;
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+ dims: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
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+ }, "strip", z.ZodTypeAny, {
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+ path: string;
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+ dims?: number[] | undefined;
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+ }, {
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+ path: string;
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+ dims?: number[] | undefined;
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+ }>, z.ZodArray<z.ZodObject<{
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+ path: z.ZodString;
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+ dims: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
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+ embeddingType: z.ZodString;
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+ }, "strip", z.ZodTypeAny, {
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+ path: string;
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+ embeddingType: string;
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+ dims?: number[] | undefined;
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+ }, {
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+ path: string;
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+ embeddingType: string;
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+ dims?: number[] | undefined;
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+ }>, "many">]>>;
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+ }, "strip", z.ZodTypeAny, {
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+ obsLabels?: {
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+ path: string;
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+ } | {
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+ path: string;
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+ obsLabelsType: string;
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+ }[] | undefined;
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+ featureLabels?: {
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+ path: string;
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+ } | {
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+ path: string;
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+ featureLabelsType: string;
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+ }[] | undefined;
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+ obsFeatureMatrix?: {
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+ path: string;
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+ featureFilterPath?: string | undefined;
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+ initialFeatureFilterPath?: string | undefined;
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+ } | undefined;
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+ obsSets?: {
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+ path: (string | string[]) & (string | string[] | undefined);
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+ name: string;
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+ scorePath?: string | undefined;
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+ }[] | undefined;
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+ obsLocations?: {
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+ path: string;
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+ dims?: number[] | undefined;
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+ } | undefined;
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+ obsSegmentations?: {
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+ path: string;
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+ } | undefined;
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+ obsEmbedding?: {
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+ path: string;
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+ dims?: number[] | undefined;
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+ } | {
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+ path: string;
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+ embeddingType: string;
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+ dims?: number[] | undefined;
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+ }[] | undefined;
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+ }, {
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+ obsLabels?: {
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+ path: string;
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+ } | {
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+ path: string;
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+ obsLabelsType: string;
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+ }[] | undefined;
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+ featureLabels?: {
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+ path: string;
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+ } | {
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+ path: string;
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+ featureLabelsType: string;
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+ }[] | undefined;
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+ obsFeatureMatrix?: {
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+ path: string;
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+ featureFilterPath?: string | undefined;
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+ initialFeatureFilterPath?: string | undefined;
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+ } | undefined;
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+ obsSets?: {
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+ path: (string | string[]) & (string | string[] | undefined);
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+ name: string;
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+ scorePath?: string | undefined;
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+ }[] | undefined;
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+ obsLocations?: {
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+ path: string;
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+ dims?: number[] | undefined;
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+ } | undefined;
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+ obsSegmentations?: {
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+ path: string;
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+ } | undefined;
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+ obsEmbedding?: {
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+ path: string;
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+ dims?: number[] | undefined;
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+ } | {
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+ path: string;
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+ embeddingType: string;
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+ dims?: number[] | undefined;
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+ }[] | undefined;
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+ }>> | PluginJointFileType<z.ZodObject<{
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+ xy: z.ZodOptional<z.ZodString>;
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+ poly: z.ZodOptional<z.ZodString>;
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+ factors: z.ZodOptional<z.ZodArray<z.ZodString, "many">>;
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+ mappings: z.ZodOptional<z.ZodRecord<z.ZodString, z.ZodObject<{
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+ key: z.ZodString;
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+ dims: z.ZodArray<z.ZodNumber, "many">;
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+ }, "strip", z.ZodTypeAny, {
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+ key: string;
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+ dims: number[];
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+ }, {
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+ key: string;
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+ dims: number[];
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+ }>>>;
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+ }, "strip", z.ZodTypeAny, {
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+ xy?: string | undefined;
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+ poly?: string | undefined;
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+ factors?: string[] | undefined;
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+ mappings?: Record<string, {
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+ key: string;
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+ dims: number[];
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+ }> | undefined;
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+ }, {
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+ xy?: string | undefined;
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+ poly?: string | undefined;
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+ factors?: string[] | undefined;
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+ mappings?: Record<string, {
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+ key: string;
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+ dims: number[];
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+ }> | undefined;
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+ }>> | PluginJointFileType<z.ZodArray<z.ZodObject<{
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+ groupName: z.ZodString;
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+ setName: z.ZodUnion<[z.ZodString, z.ZodArray<z.ZodString, "many">]>;
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+ scoreName: z.ZodOptional<z.ZodString>;
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+ }, "strip", z.ZodTypeAny, {
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+ groupName: string;
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+ setName: (string | string[]) & (string | string[] | undefined);
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+ scoreName?: string | undefined;
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+ }, {
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+ groupName: string;
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+ setName: (string | string[]) & (string | string[] | undefined);
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+ scoreName?: string | undefined;
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+ }>, "many">> | PluginJointFileType<z.ZodObject<{
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+ matrix: z.ZodString;
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+ geneFilter: z.ZodOptional<z.ZodString>;
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+ matrixGeneFilter: z.ZodOptional<z.ZodString>;
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+ geneAlias: z.ZodOptional<z.ZodString>;
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+ }, "strip", z.ZodTypeAny, {
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+ matrix: string;
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+ geneFilter?: string | undefined;
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+ matrixGeneFilter?: string | undefined;
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+ geneAlias?: string | undefined;
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+ }, {
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+ matrix: string;
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+ geneFilter?: string | undefined;
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+ matrixGeneFilter?: string | undefined;
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+ geneAlias?: string | undefined;
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+ }>> | PluginJointFileType<z.ZodNull> | PluginJointFileType<z.ZodObject<{
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+ schemaVersion: z.ZodLiteral<"0.0.2">;
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+ usePhysicalSizeScaling: z.ZodOptional<z.ZodBoolean>;
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+ renderLayers: z.ZodOptional<z.ZodArray<z.ZodString, "many">>;
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+ images: z.ZodArray<z.ZodObject<{
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+ name: z.ZodString;
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+ url: z.ZodString;
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+ type: z.ZodString;
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+ metadata: z.ZodOptional<z.ZodObject<{
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+ dimensions: z.ZodOptional<z.ZodArray<z.ZodObject<{
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+ field: z.ZodString;
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+ type: z.ZodEnum<["quantitative", "nominal", "ordinal", "temporal"]>;
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+ values: z.ZodNullable<z.ZodArray<z.ZodString, "many">>;
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+ }, "strip", z.ZodTypeAny, {
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+ values: string[] | null;
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+ type: "quantitative" | "nominal" | "ordinal" | "temporal";
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+ field: string;
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+ }, {
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+ values: string[] | null;
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+ type: "quantitative" | "nominal" | "ordinal" | "temporal";
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+ field: string;
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+ }>, "many">>;
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+ isPyramid: z.ZodOptional<z.ZodBoolean>;
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+ transform: z.ZodOptional<z.ZodUnion<[z.ZodObject<{
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+ scale: z.ZodNumber;
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+ translate: z.ZodObject<{
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+ y: z.ZodNumber;
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+ x: z.ZodNumber;
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+ }, "strip", z.ZodTypeAny, {
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+ x: number;
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+ y: number;
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+ }, {
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+ x: number;
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+ y: number;
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+ }>;
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+ }, "strip", z.ZodTypeAny, {
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+ scale: number;
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+ translate: {
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+ x: number;
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+ y: number;
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+ };
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+ }, {
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+ scale: number;
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+ translate: {
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+ x: number;
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+ y: number;
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+ };
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+ }>, z.ZodObject<{
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+ matrix: z.ZodArray<z.ZodNumber, "many">;
286
+ }, "strip", z.ZodTypeAny, {
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+ matrix: number[];
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+ }, {
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+ matrix: number[];
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+ }>]>>;
291
+ isBitmask: z.ZodOptional<z.ZodBoolean>;
292
+ omeTiffOffsetsUrl: z.ZodOptional<z.ZodString>;
293
+ }, "strip", z.ZodTypeAny, {
294
+ dimensions?: {
295
+ values: string[] | null;
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+ type: "quantitative" | "nominal" | "ordinal" | "temporal";
297
+ field: string;
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+ }[] | undefined;
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+ isPyramid?: boolean | undefined;
300
+ transform?: {
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+ scale: number;
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+ translate: {
303
+ x: number;
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+ y: number;
305
+ };
306
+ } | {
307
+ matrix: number[];
308
+ } | undefined;
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+ isBitmask?: boolean | undefined;
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+ omeTiffOffsetsUrl?: string | undefined;
311
+ }, {
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+ dimensions?: {
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+ values: string[] | null;
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+ type: "quantitative" | "nominal" | "ordinal" | "temporal";
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+ field: string;
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+ }[] | undefined;
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+ isPyramid?: boolean | undefined;
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+ transform?: {
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+ scale: number;
320
+ translate: {
321
+ x: number;
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+ y: number;
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+ };
324
+ } | {
325
+ matrix: number[];
326
+ } | undefined;
327
+ isBitmask?: boolean | undefined;
328
+ omeTiffOffsetsUrl?: string | undefined;
329
+ }>>;
330
+ requestInit: z.ZodOptional<z.ZodObject<{
331
+ method: z.ZodOptional<z.ZodString>;
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+ headers: z.ZodOptional<z.ZodRecord<z.ZodString, z.ZodAny>>;
333
+ body: z.ZodOptional<z.ZodString>;
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+ mode: z.ZodOptional<z.ZodString>;
335
+ credentials: z.ZodOptional<z.ZodString>;
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+ cache: z.ZodOptional<z.ZodString>;
337
+ redirect: z.ZodOptional<z.ZodString>;
338
+ referrer: z.ZodOptional<z.ZodString>;
339
+ integrity: z.ZodOptional<z.ZodString>;
340
+ }, "strip", z.ZodTypeAny, {
341
+ method?: string | undefined;
342
+ headers?: Record<string, any> | undefined;
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+ body?: string | undefined;
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+ mode?: string | undefined;
345
+ credentials?: string | undefined;
346
+ cache?: string | undefined;
347
+ redirect?: string | undefined;
348
+ referrer?: string | undefined;
349
+ integrity?: string | undefined;
350
+ }, {
351
+ method?: string | undefined;
352
+ headers?: Record<string, any> | undefined;
353
+ body?: string | undefined;
354
+ mode?: string | undefined;
355
+ credentials?: string | undefined;
356
+ cache?: string | undefined;
357
+ redirect?: string | undefined;
358
+ referrer?: string | undefined;
359
+ integrity?: string | undefined;
360
+ }>>;
361
+ }, "strip", z.ZodTypeAny, {
362
+ type: string;
363
+ name: string;
364
+ url: string;
365
+ metadata?: {
366
+ dimensions?: {
367
+ values: string[] | null;
368
+ type: "quantitative" | "nominal" | "ordinal" | "temporal";
369
+ field: string;
370
+ }[] | undefined;
371
+ isPyramid?: boolean | undefined;
372
+ transform?: {
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+ scale: number;
374
+ translate: {
375
+ x: number;
376
+ y: number;
377
+ };
378
+ } | {
379
+ matrix: number[];
380
+ } | undefined;
381
+ isBitmask?: boolean | undefined;
382
+ omeTiffOffsetsUrl?: string | undefined;
383
+ } | undefined;
384
+ requestInit?: {
385
+ method?: string | undefined;
386
+ headers?: Record<string, any> | undefined;
387
+ body?: string | undefined;
388
+ mode?: string | undefined;
389
+ credentials?: string | undefined;
390
+ cache?: string | undefined;
391
+ redirect?: string | undefined;
392
+ referrer?: string | undefined;
393
+ integrity?: string | undefined;
394
+ } | undefined;
395
+ }, {
396
+ type: string;
397
+ name: string;
398
+ url: string;
399
+ metadata?: {
400
+ dimensions?: {
401
+ values: string[] | null;
402
+ type: "quantitative" | "nominal" | "ordinal" | "temporal";
403
+ field: string;
404
+ }[] | undefined;
405
+ isPyramid?: boolean | undefined;
406
+ transform?: {
407
+ scale: number;
408
+ translate: {
409
+ x: number;
410
+ y: number;
411
+ };
412
+ } | {
413
+ matrix: number[];
414
+ } | undefined;
415
+ isBitmask?: boolean | undefined;
416
+ omeTiffOffsetsUrl?: string | undefined;
417
+ } | undefined;
418
+ requestInit?: {
419
+ method?: string | undefined;
420
+ headers?: Record<string, any> | undefined;
421
+ body?: string | undefined;
422
+ mode?: string | undefined;
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+ credentials?: string | undefined;
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+ cache?: string | undefined;
425
+ redirect?: string | undefined;
426
+ referrer?: string | undefined;
427
+ integrity?: string | undefined;
428
+ } | undefined;
429
+ }>, "many">;
430
+ }, "strip", z.ZodTypeAny, {
431
+ schemaVersion: "0.0.2";
432
+ images: {
433
+ type: string;
434
+ name: string;
435
+ url: string;
436
+ metadata?: {
437
+ dimensions?: {
438
+ values: string[] | null;
439
+ type: "quantitative" | "nominal" | "ordinal" | "temporal";
440
+ field: string;
441
+ }[] | undefined;
442
+ isPyramid?: boolean | undefined;
443
+ transform?: {
444
+ scale: number;
445
+ translate: {
446
+ x: number;
447
+ y: number;
448
+ };
449
+ } | {
450
+ matrix: number[];
451
+ } | undefined;
452
+ isBitmask?: boolean | undefined;
453
+ omeTiffOffsetsUrl?: string | undefined;
454
+ } | undefined;
455
+ requestInit?: {
456
+ method?: string | undefined;
457
+ headers?: Record<string, any> | undefined;
458
+ body?: string | undefined;
459
+ mode?: string | undefined;
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+ credentials?: string | undefined;
461
+ cache?: string | undefined;
462
+ redirect?: string | undefined;
463
+ referrer?: string | undefined;
464
+ integrity?: string | undefined;
465
+ } | undefined;
466
+ }[];
467
+ usePhysicalSizeScaling?: boolean | undefined;
468
+ renderLayers?: string[] | undefined;
469
+ }, {
470
+ schemaVersion: "0.0.2";
471
+ images: {
472
+ type: string;
473
+ name: string;
474
+ url: string;
475
+ metadata?: {
476
+ dimensions?: {
477
+ values: string[] | null;
478
+ type: "quantitative" | "nominal" | "ordinal" | "temporal";
479
+ field: string;
480
+ }[] | undefined;
481
+ isPyramid?: boolean | undefined;
482
+ transform?: {
483
+ scale: number;
484
+ translate: {
485
+ x: number;
486
+ y: number;
487
+ };
488
+ } | {
489
+ matrix: number[];
490
+ } | undefined;
491
+ isBitmask?: boolean | undefined;
492
+ omeTiffOffsetsUrl?: string | undefined;
493
+ } | undefined;
494
+ requestInit?: {
495
+ method?: string | undefined;
496
+ headers?: Record<string, any> | undefined;
497
+ body?: string | undefined;
498
+ mode?: string | undefined;
499
+ credentials?: string | undefined;
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+ cache?: string | undefined;
501
+ redirect?: string | undefined;
502
+ referrer?: string | undefined;
503
+ integrity?: string | undefined;
504
+ } | undefined;
505
+ }[];
506
+ usePhysicalSizeScaling?: boolean | undefined;
507
+ renderLayers?: string[] | undefined;
508
+ }>> | PluginJointFileType<z.ZodOptional<z.ZodObject<{
509
+ obsLabelsTypes: z.ZodOptional<z.ZodArray<z.ZodString, "many">>;
510
+ embeddingTypes: z.ZodOptional<z.ZodArray<z.ZodString, "many">>;
511
+ }, "strip", z.ZodTypeAny, {
512
+ obsLabelsTypes?: string[] | undefined;
513
+ embeddingTypes?: string[] | undefined;
514
+ }, {
515
+ obsLabelsTypes?: string[] | undefined;
516
+ embeddingTypes?: string[] | undefined;
517
+ }>>>)[];
518
+ export declare const baseCoordinationTypes: (PluginCoordinationType<z.ZodNullable<z.ZodString>> | PluginCoordinationType<z.ZodString> | PluginCoordinationType<z.ZodNullable<z.ZodNumber>> | PluginCoordinationType<z.ZodBoolean> | PluginCoordinationType<z.ZodNumber> | PluginCoordinationType<z.ZodEnum<["manual", "auto"]>> | PluginCoordinationType<z.ZodNullable<z.ZodBoolean>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodObject<{
519
+ channels: z.ZodArray<z.ZodObject<{
520
+ color: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
521
+ selection: z.ZodRecord<z.ZodString, z.ZodAny>;
522
+ slider: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
523
+ visible: z.ZodOptional<z.ZodBoolean>;
524
+ }, "strict", z.ZodTypeAny, {
525
+ selection: Record<string, any>;
526
+ color?: number[] | undefined;
527
+ slider?: number[] | undefined;
528
+ visible?: boolean | undefined;
529
+ }, {
530
+ selection: Record<string, any>;
531
+ color?: number[] | undefined;
532
+ slider?: number[] | undefined;
533
+ visible?: boolean | undefined;
534
+ }>, "many">;
535
+ colormap: z.ZodNullable<z.ZodString>;
536
+ transparentColor: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodNumber, "many">>>;
537
+ index: z.ZodNumber;
538
+ opacity: z.ZodNumber;
539
+ modelMatrix: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
540
+ domainType: z.ZodOptional<z.ZodEnum<["Full", "Min/Max"]>>;
541
+ resolution: z.ZodOptional<z.ZodNumber>;
542
+ xSlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
543
+ renderingMode: z.ZodOptional<z.ZodString>;
544
+ ySlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
545
+ zSlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
546
+ type: z.ZodOptional<z.ZodEnum<["raster", "bitmask"]>>;
547
+ use3d: z.ZodOptional<z.ZodBoolean>;
548
+ visible: z.ZodOptional<z.ZodBoolean>;
549
+ }, "strict", z.ZodTypeAny, {
550
+ channels: {
551
+ selection: Record<string, any>;
552
+ color?: number[] | undefined;
553
+ slider?: number[] | undefined;
554
+ visible?: boolean | undefined;
555
+ }[];
556
+ colormap: string | null;
557
+ index: number;
558
+ opacity: number;
559
+ transparentColor?: number[] | null | undefined;
560
+ modelMatrix?: number[] | undefined;
561
+ domainType?: "Full" | "Min/Max" | undefined;
562
+ resolution?: number | undefined;
563
+ xSlice?: any[] | null | undefined;
564
+ renderingMode?: string | undefined;
565
+ ySlice?: any[] | null | undefined;
566
+ zSlice?: any[] | null | undefined;
567
+ type?: "raster" | "bitmask" | undefined;
568
+ use3d?: boolean | undefined;
569
+ visible?: boolean | undefined;
570
+ }, {
571
+ channels: {
572
+ selection: Record<string, any>;
573
+ color?: number[] | undefined;
574
+ slider?: number[] | undefined;
575
+ visible?: boolean | undefined;
576
+ }[];
577
+ colormap: string | null;
578
+ index: number;
579
+ opacity: number;
580
+ transparentColor?: number[] | null | undefined;
581
+ modelMatrix?: number[] | undefined;
582
+ domainType?: "Full" | "Min/Max" | undefined;
583
+ resolution?: number | undefined;
584
+ xSlice?: any[] | null | undefined;
585
+ renderingMode?: string | undefined;
586
+ ySlice?: any[] | null | undefined;
587
+ zSlice?: any[] | null | undefined;
588
+ type?: "raster" | "bitmask" | undefined;
589
+ use3d?: boolean | undefined;
590
+ visible?: boolean | undefined;
591
+ }>, "many">>> | PluginCoordinationType<z.ZodNullable<z.ZodUnion<[z.ZodObject<{
592
+ visible: z.ZodBoolean;
593
+ stroked: z.ZodBoolean;
594
+ radius: z.ZodNumber;
595
+ opacity: z.ZodNumber;
596
+ }, "strip", z.ZodTypeAny, {
597
+ visible: boolean;
598
+ opacity: number;
599
+ stroked: boolean;
600
+ radius: number;
601
+ }, {
602
+ visible: boolean;
603
+ opacity: number;
604
+ stroked: boolean;
605
+ radius: number;
606
+ }>, z.ZodArray<z.ZodObject<{
607
+ channels: z.ZodArray<z.ZodObject<{
608
+ color: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
609
+ selection: z.ZodRecord<z.ZodString, z.ZodAny>;
610
+ slider: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
611
+ visible: z.ZodOptional<z.ZodBoolean>;
612
+ }, "strict", z.ZodTypeAny, {
613
+ selection: Record<string, any>;
614
+ color?: number[] | undefined;
615
+ slider?: number[] | undefined;
616
+ visible?: boolean | undefined;
617
+ }, {
618
+ selection: Record<string, any>;
619
+ color?: number[] | undefined;
620
+ slider?: number[] | undefined;
621
+ visible?: boolean | undefined;
622
+ }>, "many">;
623
+ colormap: z.ZodNullable<z.ZodString>;
624
+ transparentColor: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodNumber, "many">>>;
625
+ index: z.ZodNumber;
626
+ opacity: z.ZodNumber;
627
+ modelMatrix: z.ZodOptional<z.ZodArray<z.ZodNumber, "many">>;
628
+ domainType: z.ZodOptional<z.ZodEnum<["Full", "Min/Max"]>>;
629
+ resolution: z.ZodOptional<z.ZodNumber>;
630
+ xSlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
631
+ renderingMode: z.ZodOptional<z.ZodString>;
632
+ ySlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
633
+ zSlice: z.ZodOptional<z.ZodNullable<z.ZodArray<z.ZodAny, "many">>>;
634
+ type: z.ZodOptional<z.ZodEnum<["raster", "bitmask"]>>;
635
+ use3d: z.ZodOptional<z.ZodBoolean>;
636
+ visible: z.ZodOptional<z.ZodBoolean>;
637
+ }, "strict", z.ZodTypeAny, {
638
+ channels: {
639
+ selection: Record<string, any>;
640
+ color?: number[] | undefined;
641
+ slider?: number[] | undefined;
642
+ visible?: boolean | undefined;
643
+ }[];
644
+ colormap: string | null;
645
+ index: number;
646
+ opacity: number;
647
+ transparentColor?: number[] | null | undefined;
648
+ modelMatrix?: number[] | undefined;
649
+ domainType?: "Full" | "Min/Max" | undefined;
650
+ resolution?: number | undefined;
651
+ xSlice?: any[] | null | undefined;
652
+ renderingMode?: string | undefined;
653
+ ySlice?: any[] | null | undefined;
654
+ zSlice?: any[] | null | undefined;
655
+ type?: "raster" | "bitmask" | undefined;
656
+ use3d?: boolean | undefined;
657
+ visible?: boolean | undefined;
658
+ }, {
659
+ channels: {
660
+ selection: Record<string, any>;
661
+ color?: number[] | undefined;
662
+ slider?: number[] | undefined;
663
+ visible?: boolean | undefined;
664
+ }[];
665
+ colormap: string | null;
666
+ index: number;
667
+ opacity: number;
668
+ transparentColor?: number[] | null | undefined;
669
+ modelMatrix?: number[] | undefined;
670
+ domainType?: "Full" | "Min/Max" | undefined;
671
+ resolution?: number | undefined;
672
+ xSlice?: any[] | null | undefined;
673
+ renderingMode?: string | undefined;
674
+ ySlice?: any[] | null | undefined;
675
+ zSlice?: any[] | null | undefined;
676
+ type?: "raster" | "bitmask" | undefined;
677
+ use3d?: boolean | undefined;
678
+ visible?: boolean | undefined;
679
+ }>, "many">]>>> | PluginCoordinationType<z.ZodNullable<z.ZodObject<{
680
+ visible: z.ZodBoolean;
681
+ }, "strip", z.ZodTypeAny, {
682
+ visible: boolean;
683
+ }, {
684
+ visible: boolean;
685
+ }>>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodString, "many">>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodArray<z.ZodString, "many">, "many">>> | PluginCoordinationType<z.ZodNullable<z.ZodArray<z.ZodObject<{
686
+ path: z.ZodArray<z.ZodString, "many">;
687
+ color: z.ZodArray<z.ZodNumber, "many">;
688
+ }, "strip", z.ZodTypeAny, {
689
+ path: string[];
690
+ color: number[];
691
+ }, {
692
+ path: string[];
693
+ color: number[];
694
+ }>, "many">>> | PluginCoordinationType<z.ZodEnum<["geneSelection", "cellSetSelection"]>> | PluginCoordinationType<z.ZodNullable<z.ZodEnum<["log1p", "arcsinh"]>>> | PluginCoordinationType<z.ZodArray<z.ZodNumber, "many">> | PluginCoordinationType<z.ZodNullable<z.ZodEffects<z.ZodUnion<[z.ZodObject<{
695
+ version: z.ZodLiteral<"0.1.3">;
696
+ tree: z.ZodArray<z.ZodType<{
697
+ name: string;
698
+ color?: number[] | undefined;
699
+ } & {
700
+ children: (({
701
+ name: string;
702
+ color?: number[] | undefined;
703
+ } & any) | {
704
+ set: [string, number | null][];
705
+ name: string;
706
+ color?: number[] | undefined;
707
+ })[];
708
+ }, z.ZodTypeDef, {
709
+ name: string;
710
+ color?: number[] | undefined;
711
+ } & {
712
+ children: (({
713
+ name: string;
714
+ color?: number[] | undefined;
715
+ } & any) | {
716
+ set: [string, number | null][];
717
+ name: string;
718
+ color?: number[] | undefined;
719
+ })[];
720
+ }>, "many">;
721
+ }, "strip", z.ZodTypeAny, {
722
+ version: "0.1.3";
723
+ tree: ({
724
+ name: string;
725
+ color?: number[] | undefined;
726
+ } & {
727
+ children: (({
728
+ name: string;
729
+ color?: number[] | undefined;
730
+ } & any) | {
731
+ set: [string, number | null][];
732
+ name: string;
733
+ color?: number[] | undefined;
734
+ })[];
735
+ })[];
736
+ }, {
737
+ version: "0.1.3";
738
+ tree: ({
739
+ name: string;
740
+ color?: number[] | undefined;
741
+ } & {
742
+ children: (({
743
+ name: string;
744
+ color?: number[] | undefined;
745
+ } & any) | {
746
+ set: [string, number | null][];
747
+ name: string;
748
+ color?: number[] | undefined;
749
+ })[];
750
+ })[];
751
+ }>, z.ZodObject<{
752
+ version: z.ZodLiteral<"0.1.2">;
753
+ tree: z.ZodArray<z.ZodType<{
754
+ name: string;
755
+ color?: number[] | undefined;
756
+ } & {
757
+ children: (({
758
+ name: string;
759
+ color?: number[] | undefined;
760
+ } & any) | {
761
+ set: string[];
762
+ name: string;
763
+ color?: number[] | undefined;
764
+ })[];
765
+ }, z.ZodTypeDef, {
766
+ name: string;
767
+ color?: number[] | undefined;
768
+ } & {
769
+ children: (({
770
+ name: string;
771
+ color?: number[] | undefined;
772
+ } & any) | {
773
+ set: string[];
774
+ name: string;
775
+ color?: number[] | undefined;
776
+ })[];
777
+ }>, "many">;
778
+ }, "strip", z.ZodTypeAny, {
779
+ version: "0.1.2";
780
+ tree: ({
781
+ name: string;
782
+ color?: number[] | undefined;
783
+ } & {
784
+ children: (({
785
+ name: string;
786
+ color?: number[] | undefined;
787
+ } & any) | {
788
+ set: string[];
789
+ name: string;
790
+ color?: number[] | undefined;
791
+ })[];
792
+ })[];
793
+ }, {
794
+ version: "0.1.2";
795
+ tree: ({
796
+ name: string;
797
+ color?: number[] | undefined;
798
+ } & {
799
+ children: (({
800
+ name: string;
801
+ color?: number[] | undefined;
802
+ } & any) | {
803
+ set: string[];
804
+ name: string;
805
+ color?: number[] | undefined;
806
+ })[];
807
+ })[];
808
+ }>]>, {
809
+ version: "0.1.3";
810
+ tree: ({
811
+ name: string;
812
+ color?: number[] | undefined;
813
+ } & {
814
+ children: (({
815
+ name: string;
816
+ color?: number[] | undefined;
817
+ } & any) | {
818
+ set: [string, number | null][];
819
+ name: string;
820
+ color?: number[] | undefined;
821
+ })[];
822
+ })[];
823
+ }, {
824
+ version: "0.1.2";
825
+ tree: ({
826
+ name: string;
827
+ color?: number[] | undefined;
828
+ } & {
829
+ children: (({
830
+ name: string;
831
+ color?: number[] | undefined;
832
+ } & any) | {
833
+ set: string[];
834
+ name: string;
835
+ color?: number[] | undefined;
836
+ })[];
837
+ })[];
838
+ } | {
839
+ version: "0.1.3";
840
+ tree: ({
841
+ name: string;
842
+ color?: number[] | undefined;
843
+ } & {
844
+ children: (({
845
+ name: string;
846
+ color?: number[] | undefined;
847
+ } & any) | {
848
+ set: [string, number | null][];
849
+ name: string;
850
+ color?: number[] | undefined;
851
+ })[];
852
+ })[];
853
+ }>>>)[];
854
+ //# sourceMappingURL=base-plugins.d.ts.map