@vinaes/succ 1.3.19

package/dist/lib/db/documents.d.ts

@@ -0,0 +1,58 @@
+import { SearchResult } from './types.js';
+export interface DocumentBatch {
+    filePath: string;
+    chunkIndex: number;
+    content: string;
+    startLine: number;
+    endLine: number;
+    embedding: number[];
+    symbolName?: string;
+    symbolType?: string;
+    signature?: string;
+}
+export interface DocumentBatchWithHash extends DocumentBatch {
+    hash: string;
+}
+export declare function upsertDocument(filePath: string, chunkIndex: number, content: string, startLine: number, endLine: number, embedding: number[], symbolName?: string, symbolType?: string, signature?: string): void;
+/**
+ * Batch upsert documents in a single transaction.
+ * ~100x faster than individual upserts due to single fsync.
+ */
+export declare function upsertDocumentsBatch(documents: DocumentBatch[]): number[];
+/**
+ * Batch upsert documents AND their file hashes in a single transaction.
+ * Prevents race condition where chunks are saved but hashes are not.
+ */
+export declare function upsertDocumentsBatchWithHashes(documents: DocumentBatchWithHash[]): number[];
+export declare function deleteDocumentsByPath(filePath: string): void;
+export declare function searchDocuments(queryEmbedding: number[], limit?: number, threshold?: number): SearchResult[];
+/**
+ * Get recent documents (for wildcard search)
+ */
+export declare function getRecentDocuments(limit?: number): Array<{
+    file_path: string;
+    content: string;
+    start_line: number;
+    end_line: number;
+}>;
+export declare function getStats(): {
+    total_documents: number;
+    total_files: number;
+    last_indexed: string | null;
+};
+/**
+ * Clear all documents from the index.
+ * Used for reindexing after embedding model change.
+ */
+export declare function clearDocuments(): void;
+/**
+ * Clear only code documents from the index (keeps brain docs).
+ * Used for reindexing code after embedding model change.
+ */
+export declare function clearCodeDocuments(): void;
+/**
+ * Get the embedding dimension of stored documents.
+ * Returns null if no documents exist.
+ */
+export declare function getStoredEmbeddingDimension(): number | null;
+//# sourceMappingURL=documents.d.ts.map

package/dist/lib/db/documents.d.ts.map

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package/dist/lib/db/documents.js

@@ -0,0 +1,374 @@
+import fs from 'fs';
+import path from 'path';
+import { getDb, cachedPrepare } from './connection.js';
+import { sqliteVecAvailable } from './schema.js';
+import { floatArrayToBuffer, bufferToFloatArray } from './helpers.js';
+import { cosineSimilarity } from '../embeddings.js';
+import { invalidateCodeBm25Index, invalidateDocsBm25Index } from './bm25-indexes.js';
+import { getSuccDir } from '../config.js';
+import { logWarn } from '../fault-logger.js';
+/**
+ * Log document deletion events to .succ/document-audit.log for debugging.
+ */
+function logDocDeletion(caller, count, detail) {
+    try {
+        const succDir = getSuccDir();
+        const logFile = path.join(succDir, 'document-audit.log');
+        const timestamp = new Date().toISOString();
+        const detailStr = detail ? ` | ${detail}` : '';
+        const line = `[${timestamp}] [DELETE] ${caller} | count=${count}${detailStr}\n`;
+        fs.appendFileSync(logFile, line);
+    }
+    catch {
+        // Never let audit logging break actual operations
+    }
+}
+/** Invalidate the BM25 index appropriate for a file path */
+function invalidateBm25ForPath(filePath) {
+    if (filePath.startsWith('code:')) {
+        invalidateCodeBm25Index();
+    }
+    else {
+        invalidateDocsBm25Index();
+    }
+}
+export function upsertDocument(filePath, chunkIndex, content, startLine, endLine, embedding, symbolName, symbolType, signature) {
+    const database = getDb();
+    const embeddingBlob = Buffer.from(new Float32Array(embedding).buffer);
+    // Get existing doc ID if any (for vec table update)
+    const existing = cachedPrepare('SELECT id FROM documents WHERE file_path = ? AND chunk_index = ?').get(filePath, chunkIndex);
+    database
+        .prepare(`
+    INSERT INTO documents (file_path, chunk_index, content, start_line, end_line, embedding, symbol_name, symbol_type, signature, updated_at)
+    VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, CURRENT_TIMESTAMP)
+    ON CONFLICT(file_path, chunk_index) DO UPDATE SET
+      content = excluded.content,
+      start_line = excluded.start_line,
+      end_line = excluded.end_line,
+      embedding = excluded.embedding,
+      symbol_name = excluded.symbol_name,
+      symbol_type = excluded.symbol_type,
+      signature = excluded.signature,
+      updated_at = CURRENT_TIMESTAMP
+  `)
+        .run(filePath, chunkIndex, content, startLine, endLine, embeddingBlob, symbolName ?? null, symbolType ?? null, signature ?? null);
+    // Update vec_documents with mapping table
+    if (sqliteVecAvailable) {
+        try {
+            if (existing) {
+                // Update existing: delete old mapping and vec entry, insert new
+                const oldMapping = cachedPrepare('SELECT vec_rowid FROM vec_documents_map WHERE doc_id = ?').get(existing.id);
+                if (oldMapping) {
+                    cachedPrepare('DELETE FROM vec_documents WHERE rowid = ?').run(oldMapping.vec_rowid);
+                    cachedPrepare('DELETE FROM vec_documents_map WHERE doc_id = ?').run(existing.id);
+                }
+                const vecResult = cachedPrepare('INSERT INTO vec_documents(embedding) VALUES (?)').run(embeddingBlob);
+                cachedPrepare('INSERT INTO vec_documents_map(vec_rowid, doc_id) VALUES (?, ?)').run(vecResult.lastInsertRowid, existing.id);
+            }
+            else {
+                // New doc - get the inserted ID
+                const newDoc = cachedPrepare('SELECT id FROM documents WHERE file_path = ? AND chunk_index = ?').get(filePath, chunkIndex);
+                const vecResult = cachedPrepare('INSERT INTO vec_documents(embedding) VALUES (?)').run(embeddingBlob);
+                cachedPrepare('INSERT INTO vec_documents_map(vec_rowid, doc_id) VALUES (?, ?)').run(vecResult.lastInsertRowid, newDoc.id);
+            }
+        }
+        catch (err) {
+            logWarn('documents', 'Vector insert failed for document, semantic search may not find it', {
+                error: err instanceof Error ? err.message : String(err),
+            });
+        }
+    }
+    invalidateBm25ForPath(filePath);
+}
+/**
+ * Batch upsert documents in a single transaction.
+ * ~100x faster than individual upserts due to single fsync.
+ */
+export function upsertDocumentsBatch(documents) {
+    if (documents.length === 0)
+        return [];
+    const database = getDb();
+    const stmt = database.prepare(`
+    INSERT INTO documents (file_path, chunk_index, content, start_line, end_line, embedding, symbol_name, symbol_type, signature, updated_at)
+    VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, CURRENT_TIMESTAMP)
+    ON CONFLICT(file_path, chunk_index) DO UPDATE SET
+      content = excluded.content,
+      start_line = excluded.start_line,
+      end_line = excluded.end_line,
+      embedding = excluded.embedding,
+      symbol_name = excluded.symbol_name,
+      symbol_type = excluded.symbol_type,
+      signature = excluded.signature,
+      updated_at = CURRENT_TIMESTAMP
+  `);
+    const transaction = database.transaction((docs) => {
+        for (const doc of docs) {
+            const embeddingBlob = Buffer.from(new Float32Array(doc.embedding).buffer);
+            stmt.run(doc.filePath, doc.chunkIndex, doc.content, doc.startLine, doc.endLine, embeddingBlob, doc.symbolName ?? null, doc.symbolType ?? null, doc.signature ?? null);
+        }
+    });
+    transaction(documents);
+    // Rebuild vec_documents for affected files
+    rebuildVecDocumentsForFiles(documents.map((d) => d.filePath));
+    // Auto-invalidate affected BM25 indexes
+    const hasCode = documents.some((d) => d.filePath.startsWith('code:'));
+    const hasDocs = documents.some((d) => !d.filePath.startsWith('code:'));
+    if (hasCode)
+        invalidateCodeBm25Index();
+    if (hasDocs)
+        invalidateDocsBm25Index();
+    // SQLite uses sqlite-vec internally, no need to return IDs for Qdrant
+    return [];
+}
+/**
+ * Rebuild vec_documents entries for specific files
+ */
+function rebuildVecDocumentsForFiles(filePaths) {
+    if (!sqliteVecAvailable || filePaths.length === 0)
+        return;
+    const database = getDb();
+    const uniquePaths = [...new Set(filePaths)];
+    try {
+        const transaction = database.transaction(() => {
+            for (const filePath of uniquePaths) {
+                // Get all docs for this file
+                const docs = database
+                    .prepare('SELECT id, embedding FROM documents WHERE file_path = ?')
+                    .all(filePath);
+                for (const doc of docs) {
+                    // Delete existing vec entry if any (using mapping table)
+                    const existing = database
+                        .prepare('SELECT vec_rowid FROM vec_documents_map WHERE doc_id = ?')
+                        .get(doc.id);
+                    if (existing) {
+                        database.prepare('DELETE FROM vec_documents WHERE rowid = ?').run(existing.vec_rowid);
+                        database.prepare('DELETE FROM vec_documents_map WHERE doc_id = ?').run(doc.id);
+                    }
+                    // Insert new vec entry with mapping
+                    const vecResult = database
+                        .prepare('INSERT INTO vec_documents(embedding) VALUES (?)')
+                        .run(doc.embedding);
+                    database
+                        .prepare('INSERT INTO vec_documents_map(vec_rowid, doc_id) VALUES (?, ?)')
+                        .run(vecResult.lastInsertRowid, doc.id);
+                }
+            }
+        });
+        transaction();
+    }
+    catch (err) {
+        logWarn('documents', 'Batch vector insert failed, documents may not be semantically searchable', { error: err instanceof Error ? err.message : String(err) });
+    }
+}
+/**
+ * Batch upsert documents AND their file hashes in a single transaction.
+ * Prevents race condition where chunks are saved but hashes are not.
+ */
+export function upsertDocumentsBatchWithHashes(documents) {
+    if (documents.length === 0)
+        return [];
+    const database = getDb();
+    const docStmt = database.prepare(`
+    INSERT INTO documents (file_path, chunk_index, content, start_line, end_line, embedding, symbol_name, symbol_type, signature, updated_at)
+    VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, CURRENT_TIMESTAMP)
+    ON CONFLICT(file_path, chunk_index) DO UPDATE SET
+      content = excluded.content,
+      start_line = excluded.start_line,
+      end_line = excluded.end_line,
+      embedding = excluded.embedding,
+      symbol_name = excluded.symbol_name,
+      symbol_type = excluded.symbol_type,
+      signature = excluded.signature,
+      updated_at = CURRENT_TIMESTAMP
+  `);
+    const hashStmt = database.prepare(`
+    INSERT INTO file_hashes (file_path, content_hash, indexed_at)
+    VALUES (?, ?, CURRENT_TIMESTAMP)
+    ON CONFLICT(file_path) DO UPDATE SET
+      content_hash = excluded.content_hash,
+      indexed_at = CURRENT_TIMESTAMP
+  `);
+    const transaction = database.transaction((docs) => {
+        const processedFiles = new Set();
+        for (const doc of docs) {
+            // Insert document
+            const embeddingBlob = Buffer.from(new Float32Array(doc.embedding).buffer);
+            docStmt.run(doc.filePath, doc.chunkIndex, doc.content, doc.startLine, doc.endLine, embeddingBlob, doc.symbolName ?? null, doc.symbolType ?? null, doc.signature ?? null);
+            // Update file hash (once per file)
+            if (!processedFiles.has(doc.filePath)) {
+                hashStmt.run(doc.filePath, doc.hash);
+                processedFiles.add(doc.filePath);
+            }
+        }
+    });
+    transaction(documents);
+    // Rebuild vec_documents for affected files
+    rebuildVecDocumentsForFiles(documents.map((d) => d.filePath));
+    // Auto-invalidate affected BM25 indexes
+    const hasCode = documents.some((d) => d.filePath.startsWith('code:'));
+    const hasDocs = documents.some((d) => !d.filePath.startsWith('code:'));
+    if (hasCode)
+        invalidateCodeBm25Index();
+    if (hasDocs)
+        invalidateDocsBm25Index();
+    // SQLite uses sqlite-vec internally, no need to return IDs for Qdrant
+    return [];
+}
+export function deleteDocumentsByPath(filePath) {
+    // Also delete from vec_documents using mapping table
+    if (sqliteVecAvailable) {
+        try {
+            const docIds = cachedPrepare('SELECT id FROM documents WHERE file_path = ?').all(filePath);
+            for (const { id } of docIds) {
+                const mapping = cachedPrepare('SELECT vec_rowid FROM vec_documents_map WHERE doc_id = ?').get(id);
+                if (mapping) {
+                    cachedPrepare('DELETE FROM vec_documents WHERE rowid = ?').run(mapping.vec_rowid);
+                    cachedPrepare('DELETE FROM vec_documents_map WHERE doc_id = ?').run(id);
+                }
+            }
+        }
+        catch (err) {
+            logWarn('documents', 'Vector cleanup failed during document deletion', {
+                error: err instanceof Error ? err.message : String(err),
+            });
+        }
+    }
+    const result = cachedPrepare('DELETE FROM documents WHERE file_path = ?').run(filePath);
+    if (result.changes > 0) {
+        logDocDeletion('deleteDocumentsByPath', result.changes, `path="${filePath}"`);
+    }
+    invalidateBm25ForPath(filePath);
+}
+export function searchDocuments(queryEmbedding, limit = 5, threshold = 0.5) {
+    const database = getDb();
+    // Try sqlite-vec fast path
+    if (sqliteVecAvailable) {
+        try {
+            const candidateLimit = Math.max(limit * 3, 30);
+            const queryBuffer = floatArrayToBuffer(queryEmbedding);
+            const vecResults = cachedPrepare(`
+        SELECT m.doc_id, v.distance
+        FROM vec_documents v
+        JOIN vec_documents_map m ON m.vec_rowid = v.rowid
+        WHERE v.embedding MATCH ?
+          AND k = ?
+        ORDER BY v.distance
+      `).all(queryBuffer, candidateLimit);
+            if (vecResults.length > 0) {
+                const docIds = vecResults.map((r) => r.doc_id);
+                const distanceMap = new Map(vecResults.map((r) => [r.doc_id, r.distance]));
+                const placeholders = docIds.map(() => '?').join(',');
+                const rows = database
+                    .prepare(`
+          SELECT id, file_path, content, start_line, end_line
+          FROM documents WHERE id IN (${placeholders})
+        `)
+                    .all(...docIds);
+                const results = [];
+                for (const row of rows) {
+                    const distance = distanceMap.get(row.id) ?? 1;
+                    const similarity = 1 - distance;
+                    if (similarity >= threshold) {
+                        results.push({
+                            file_path: row.file_path,
+                            content: row.content,
+                            start_line: row.start_line,
+                            end_line: row.end_line,
+                            similarity,
+                        });
+                    }
+                }
+                results.sort((a, b) => b.similarity - a.similarity);
+                return results.slice(0, limit);
+            }
+        }
+        catch (err) {
+            logWarn('documents', 'sqlite-vec KNN failed, using brute-force fallback', {
+                error: err instanceof Error ? err.message : String(err),
+            });
+        }
+    }
+    // Brute-force fallback
+    const rows = cachedPrepare('SELECT * FROM documents').all();
+    const results = [];
+    for (const row of rows) {
+        const embedding = bufferToFloatArray(row.embedding);
+        const similarity = cosineSimilarity(queryEmbedding, embedding);
+        if (similarity >= threshold) {
+            results.push({
+                file_path: row.file_path,
+                content: row.content,
+                start_line: row.start_line,
+                end_line: row.end_line,
+                similarity,
+            });
+        }
+    }
+    results.sort((a, b) => b.similarity - a.similarity);
+    return results.slice(0, limit);
+}
+/**
+ * Get recent documents (for wildcard search)
+ */
+export function getRecentDocuments(limit = 10) {
+    const rows = cachedPrepare(`
+      SELECT file_path, content, start_line, end_line
+      FROM documents
+      WHERE file_path NOT LIKE 'code:%'
+      ORDER BY rowid DESC
+      LIMIT ?
+    `).all(limit);
+    return rows;
+}
+export function getStats() {
+    const totalDocs = cachedPrepare('SELECT COUNT(*) as count FROM documents').get();
+    const totalFiles = cachedPrepare('SELECT COUNT(DISTINCT file_path) as count FROM documents').get();
+    const lastIndexed = cachedPrepare('SELECT MAX(updated_at) as last FROM documents').get();
+    return {
+        total_documents: totalDocs.count,
+        total_files: totalFiles.count,
+        last_indexed: lastIndexed.last,
+    };
+}
+/**
+ * Clear all documents from the index.
+ * Used for reindexing after embedding model change.
+ */
+export function clearDocuments() {
+    const docCount = cachedPrepare('SELECT COUNT(*) as cnt FROM documents').get()
+        .cnt;
+    logDocDeletion('clearDocuments', docCount, 'all documents + file_hashes cleared');
+    cachedPrepare('DELETE FROM documents').run();
+    cachedPrepare('DELETE FROM file_hashes').run();
+    cachedPrepare("DELETE FROM metadata WHERE key = 'embedding_model'").run();
+    // Reset vec migration flags so next init can re-populate vec tables
+    cachedPrepare("DELETE FROM metadata WHERE key = 'vec_documents_migrated_dims'").run();
+    cachedPrepare("DELETE FROM metadata WHERE key = 'vec_memories_migrated_dims'").run();
+    invalidateCodeBm25Index();
+    invalidateDocsBm25Index();
+}
+/**
+ * Clear only code documents from the index (keeps brain docs).
+ * Used for reindexing code after embedding model change.
+ */
+export function clearCodeDocuments() {
+    const codeCount = cachedPrepare("SELECT COUNT(*) as cnt FROM documents WHERE file_path LIKE 'code:%'").get().cnt;
+    logDocDeletion('clearCodeDocuments', codeCount, 'code documents cleared');
+    cachedPrepare("DELETE FROM documents WHERE file_path LIKE 'code:%'").run();
+    cachedPrepare("DELETE FROM file_hashes WHERE file_path LIKE 'code:%'").run();
+    // Reset vec documents migration flag so next init can re-populate
+    cachedPrepare("DELETE FROM metadata WHERE key = 'vec_documents_migrated_dims'").run();
+    invalidateCodeBm25Index();
+}
+/**
+ * Get the embedding dimension of stored documents.
+ * Returns null if no documents exist.
+ */
+export function getStoredEmbeddingDimension() {
+    const row = cachedPrepare('SELECT embedding FROM documents LIMIT 1').get();
+    if (!row)
+        return null;
+    const embedding = bufferToFloatArray(row.embedding);
+    return embedding.length;
+}
+//# sourceMappingURL=documents.js.map

package/dist/lib/db/documents.js.map

@@ -0,0 +1 @@
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package/dist/lib/db/file-hash.d.ts

@@ -0,0 +1,26 @@
+/**
+ * Get stored hash for a file
+ */
+export declare function getFileHash(filePath: string): string | null;
+/**
+ * Store hash for a file
+ */
+export declare function setFileHash(filePath: string, hash: string): void;
+/**
+ * Delete hash for a file
+ */
+export declare function deleteFileHash(filePath: string): void;
+/**
+ * Get all stored file hashes
+ */
+export declare function getAllFileHashes(): Map<string, string>;
+/**
+ * Get all stored file hashes with indexed_at timestamps.
+ * Used for freshness checks — compare file mtime against indexed_at.
+ */
+export declare function getAllFileHashesWithTimestamps(): Array<{
+    file_path: string;
+    content_hash: string;
+    indexed_at: string;
+}>;
+//# sourceMappingURL=file-hash.d.ts.map

package/dist/lib/db/file-hash.d.ts.map

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package/dist/lib/db/file-hash.js

@@ -0,0 +1,56 @@
+import { getDb } from './connection.js';
+/**
+ * Get stored hash for a file
+ */
+export function getFileHash(filePath) {
+    const database = getDb();
+    const row = database
+        .prepare('SELECT content_hash FROM file_hashes WHERE file_path = ?')
+        .get(filePath);
+    return row?.content_hash ?? null;
+}
+/**
+ * Store hash for a file
+ */
+export function setFileHash(filePath, hash) {
+    const database = getDb();
+    database
+        .prepare(`
+      INSERT INTO file_hashes (file_path, content_hash, indexed_at)
+      VALUES (?, ?, CURRENT_TIMESTAMP)
+      ON CONFLICT(file_path) DO UPDATE SET
+        content_hash = excluded.content_hash,
+        indexed_at = CURRENT_TIMESTAMP
+    `)
+        .run(filePath, hash);
+}
+/**
+ * Delete hash for a file
+ */
+export function deleteFileHash(filePath) {
+    const database = getDb();
+    database.prepare('DELETE FROM file_hashes WHERE file_path = ?').run(filePath);
+}
+/**
+ * Get all stored file hashes
+ */
+export function getAllFileHashes() {
+    const database = getDb();
+    const rows = database.prepare('SELECT file_path, content_hash FROM file_hashes').all();
+    const map = new Map();
+    for (const row of rows) {
+        map.set(row.file_path, row.content_hash);
+    }
+    return map;
+}
+/**
+ * Get all stored file hashes with indexed_at timestamps.
+ * Used for freshness checks — compare file mtime against indexed_at.
+ */
+export function getAllFileHashesWithTimestamps() {
+    const database = getDb();
+    return database
+        .prepare('SELECT file_path, content_hash, indexed_at FROM file_hashes')
+        .all();
+}
+//# sourceMappingURL=file-hash.js.map

package/dist/lib/db/file-hash.js.map

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package/dist/lib/db/global-memories.d.ts

@@ -0,0 +1,62 @@
+import { MemoryType } from './schema.js';
+import { SaveMemoryResult } from './memories.js';
+export interface GlobalMemory {
+    id: number;
+    content: string;
+    tags: string[];
+    source: string | null;
+    project: string | null;
+    quality_score: number | null;
+    quality_factors: Record<string, number> | null;
+    created_at: string;
+    isGlobal: true;
+}
+export interface GlobalMemorySearchResult {
+    id: number;
+    content: string;
+    tags: string[];
+    source: string | null;
+    project: string | null;
+    quality_score: number | null;
+    quality_factors: Record<string, number> | null;
+    created_at: string;
+    similarity: number;
+    isGlobal: true;
+}
+/**
+ * Check if a similar global memory already exists
+ */
+export declare function findSimilarGlobalMemory(embedding: number[], threshold?: number): {
+    id: number;
+    content: string;
+    similarity: number;
+} | null;
+/**
+ * Save a memory to global database with deduplication and type
+ */
+export declare function saveGlobalMemory(content: string, embedding: number[], tags?: string[], source?: string, project?: string, options?: {
+    deduplicate?: boolean;
+    type?: MemoryType;
+}): SaveMemoryResult;
+/**
+ * Search global memories by semantic similarity
+ */
+export declare function searchGlobalMemories(queryEmbedding: number[], limit?: number, threshold?: number, tags?: string[], since?: Date): GlobalMemorySearchResult[];
+/**
+ * Get recent global memories
+ */
+export declare function getRecentGlobalMemories(limit?: number): GlobalMemory[];
+/**
+ * Delete global memory by ID
+ */
+export declare function deleteGlobalMemory(id: number): boolean;
+/**
+ * Get global memory stats
+ */
+export declare function getGlobalMemoryStats(): {
+    total_memories: number;
+    oldest_memory: string | null;
+    newest_memory: string | null;
+    projects: string[];
+};
+//# sourceMappingURL=global-memories.d.ts.map

package/dist/lib/db/global-memories.d.ts.map

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