@vibe-agent-toolkit/rag-lancedb 0.1.12 → 0.1.14

package/dist/document-helpers.d.ts

@@ -0,0 +1,51 @@
+/**
+ * Pure logic helpers for document storage and metadata overlay.
+ *
+ * Extracted from LanceDBRAGProvider to enable direct unit testing
+ * without LanceDB dependencies.
+ */
+import type { CoreRAGChunk, TokenCounter } from '@vibe-agent-toolkit/rag';
+import type { ResourceMetadata } from '@vibe-agent-toolkit/resources';
+import type { ZodObject, ZodRawShape } from 'zod';
+/**
+ * Accumulated document record collected during indexing.
+ * Stored to rag_documents table when storeDocuments is enabled.
+ */
+export interface DocumentRecord {
+    resourceid: string;
+    filepath: string;
+    content: string;
+    contenthash: string;
+    tokencount: number;
+    totalchunks: number;
+    indexedat: number;
+    [key: string]: string | number;
+}
+/**
+ * Overlay custom metadata from resource frontmatter onto enriched RAG chunks.
+ *
+ * Copies matching frontmatter values (per the metadata schema keys) onto
+ * each chunk, producing typed chunks with metadata included.
+ *
+ * @param ragChunks - Enriched RAG chunks to augment
+ * @param frontmatter - Resource frontmatter (may be undefined)
+ * @param metadataSchema - Zod schema defining the metadata fields
+ * @returns Chunks with metadata overlaid
+ */
+export declare function overlayChunkMetadata<TMetadata extends Record<string, unknown>>(ragChunks: CoreRAGChunk[], frontmatter: Record<string, unknown> | undefined, metadataSchema: ZodObject<ZodRawShape>): (CoreRAGChunk & TMetadata)[];
+/**
+ * Create a DocumentRecord for the rag_documents table.
+ *
+ * Builds the record from resource metadata, transformed content,
+ * and overlays frontmatter fields using the metadata schema.
+ *
+ * @param resource - Resource metadata (id, filePath, frontmatter)
+ * @param content - Transformed content to store
+ * @param contentHash - Content hash for change detection
+ * @param totalChunks - Number of chunks created from this document
+ * @param tokenCounter - Token counter for computing token count
+ * @param metadataSchema - Zod schema defining the metadata fields
+ * @returns DocumentRecord ready for LanceDB insertion
+ */
+export declare function createDocumentRecord(resource: ResourceMetadata, content: string, contentHash: string, totalChunks: number, tokenCounter: TokenCounter, metadataSchema: ZodObject<ZodRawShape>): DocumentRecord;
+//# sourceMappingURL=document-helpers.d.ts.map

package/dist/document-helpers.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"document-helpers.d.ts","sourceRoot":"","sources":["../src/document-helpers.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,KAAK,EAAE,YAAY,EAAE,YAAY,EAAE,MAAM,yBAAyB,CAAC;AAC1E,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AACtE,OAAO,KAAK,EAAE,SAAS,EAAE,WAAW,EAAE,MAAM,KAAK,CAAC;AAElD;;;GAGG;AACH,MAAM,WAAW,cAAc;IAC7B,UAAU,EAAE,MAAM,CAAC;IACnB,QAAQ,EAAE,MAAM,CAAC;IACjB,OAAO,EAAE,MAAM,CAAC;IAChB,WAAW,EAAE,MAAM,CAAC;IACpB,UAAU,EAAE,MAAM,CAAC;IACnB,WAAW,EAAE,MAAM,CAAC;IACpB,SAAS,EAAE,MAAM,CAAC;IAClB,CAAC,GAAG,EAAE,MAAM,GAAG,MAAM,GAAG,MAAM,CAAC;CAChC;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,oBAAoB,CAAC,SAAS,SAAS,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAC5E,SAAS,EAAE,YAAY,EAAE,EACzB,WAAW,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,SAAS,EAChD,cAAc,EAAE,SAAS,CAAC,WAAW,CAAC,GACrC,CAAC,YAAY,GAAG,SAAS,CAAC,EAAE,CAc9B;AAED;;;;;;;;;;;;;GAaG;AACH,wBAAgB,oBAAoB,CAClC,QAAQ,EAAE,gBAAgB,EAC1B,OAAO,EAAE,MAAM,EACf,WAAW,EAAE,MAAM,EACnB,WAAW,EAAE,MAAM,EACnB,YAAY,EAAE,YAAY,EAC1B,cAAc,EAAE,SAAS,CAAC,WAAW,CAAC,GACrC,cAAc,CAuBhB"}

package/dist/document-helpers.js

@@ -0,0 +1,67 @@
+/**
+ * Pure logic helpers for document storage and metadata overlay.
+ *
+ * Extracted from LanceDBRAGProvider to enable direct unit testing
+ * without LanceDB dependencies.
+ */
+/**
+ * Overlay custom metadata from resource frontmatter onto enriched RAG chunks.
+ *
+ * Copies matching frontmatter values (per the metadata schema keys) onto
+ * each chunk, producing typed chunks with metadata included.
+ *
+ * @param ragChunks - Enriched RAG chunks to augment
+ * @param frontmatter - Resource frontmatter (may be undefined)
+ * @param metadataSchema - Zod schema defining the metadata fields
+ * @returns Chunks with metadata overlaid
+ */
+export function overlayChunkMetadata(ragChunks, frontmatter, metadataSchema) {
+    return ragChunks.map((chunk) => {
+        const chunkWithMetadata = { ...chunk };
+        if (frontmatter) {
+            for (const key of Object.keys(metadataSchema.shape)) {
+                if (key in frontmatter) {
+                    chunkWithMetadata[key] = frontmatter[key];
+                }
+            }
+        }
+        return chunkWithMetadata;
+    });
+}
+/**
+ * Create a DocumentRecord for the rag_documents table.
+ *
+ * Builds the record from resource metadata, transformed content,
+ * and overlays frontmatter fields using the metadata schema.
+ *
+ * @param resource - Resource metadata (id, filePath, frontmatter)
+ * @param content - Transformed content to store
+ * @param contentHash - Content hash for change detection
+ * @param totalChunks - Number of chunks created from this document
+ * @param tokenCounter - Token counter for computing token count
+ * @param metadataSchema - Zod schema defining the metadata fields
+ * @returns DocumentRecord ready for LanceDB insertion
+ */
+export function createDocumentRecord(resource, content, contentHash, totalChunks, tokenCounter, metadataSchema) {
+    const documentRecord = {
+        resourceid: resource.id,
+        filepath: resource.filePath,
+        content,
+        contenthash: contentHash,
+        tokencount: tokenCounter.count(content),
+        totalchunks: totalChunks,
+        indexedat: Date.now(),
+    };
+    if (resource.frontmatter) {
+        for (const key of Object.keys(metadataSchema.shape)) {
+            if (key in resource.frontmatter) {
+                const value = resource.frontmatter[key];
+                documentRecord[key.toLowerCase()] = typeof value === 'string' || typeof value === 'number'
+                    ? value
+                    : JSON.stringify(value);
+            }
+        }
+    }
+    return documentRecord;
+}
+//# sourceMappingURL=document-helpers.js.map

package/dist/document-helpers.js.map

@@ -0,0 +1 @@
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package/dist/index.d.ts

@@ -4,6 +4,7 @@
  * LanceDB implementation of RAG interfaces for vibe-agent-toolkit.
  */
 export { LanceDBRAGProvider, type LanceDBConfig } from './lancedb-rag-provider.js';
+export type { ContentTransformOptions, LinkRewriteRule, LinkRewriteMatch } from '@vibe-agent-toolkit/resources';
 export { chunkToLanceRow, lanceRowToChunk, type LanceDBRow } from './schema.js';
 export { buildMetadataFilter, buildMetadataWhereClause, buildWhereClause, } from './filter-builder.js';
 //# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,kBAAkB,EAAE,KAAK,aAAa,EAAE,MAAM,2BAA2B,CAAC;AACnF,OAAO,EAAE,eAAe,EAAE,eAAe,EAAE,KAAK,UAAU,EAAE,MAAM,aAAa,CAAC;AAChF,OAAO,EACL,mBAAmB,EACnB,wBAAwB,EACxB,gBAAgB,GACjB,MAAM,qBAAqB,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,kBAAkB,EAAE,KAAK,aAAa,EAAE,MAAM,2BAA2B,CAAC;AACnF,YAAY,EAAE,uBAAuB,EAAE,eAAe,EAAE,gBAAgB,EAAE,MAAM,+BAA+B,CAAC;AAChH,OAAO,EAAE,eAAe,EAAE,eAAe,EAAE,KAAK,UAAU,EAAE,MAAM,aAAa,CAAC;AAChF,OAAO,EACL,mBAAmB,EACnB,wBAAwB,EACxB,gBAAgB,GACjB,MAAM,qBAAqB,CAAC"}

package/dist/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,kBAAkB,EAAsB,MAAM,2BAA2B,CAAC;AACnF,OAAO,EAAE,eAAe,EAAE,eAAe,EAAmB,MAAM,aAAa,CAAC;AAChF,OAAO,EACL,mBAAmB,EACnB,wBAAwB,EACxB,gBAAgB,GACjB,MAAM,qBAAqB,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAAE,kBAAkB,EAAsB,MAAM,2BAA2B,CAAC;AAEnF,OAAO,EAAE,eAAe,EAAE,eAAe,EAAmB,MAAM,aAAa,CAAC;AAChF,OAAO,EACL,mBAAmB,EACnB,wBAAwB,EACxB,gBAAgB,GACjB,MAAM,qBAAqB,CAAC"}

package/dist/lancedb-rag-provider.d.ts

@@ -3,8 +3,8 @@
  *
  * Implements both RAGQueryProvider and RAGAdminProvider using LanceDB.
  */
-import type { DefaultRAGMetadata, EmbeddingProvider, IndexProgress, IndexResult, RAGAdminProvider, RAGQuery, RAGResult, RAGStats } from '@vibe-agent-toolkit/rag';
-import { type ResourceMetadata } from '@vibe-agent-toolkit/resources';
+import type { DefaultRAGMetadata, DocumentResult, EmbeddingProvider, IndexProgress, IndexResult, RAGAdminProvider, RAGQuery, RAGResult, RAGStats } from '@vibe-agent-toolkit/rag';
+import { type ContentTransformOptions, type ResourceMetadata } from '@vibe-agent-toolkit/resources';
 import type { ZodObject, ZodRawShape } from 'zod';
 /**
  * Configuration for LanceDBRAGProvider (generic over metadata type)
@@ -22,6 +22,27 @@ export interface LanceDBConfig<_TMetadata extends Record<string, unknown> = Defa
     paddingFactor?: number;
     /** Metadata schema for validation and serialization (defaults to DefaultRAGMetadataSchema) */
     metadataSchema?: ZodObject<ZodRawShape>;
+    /**
+     * Content transform options applied before chunking and storage.
+     *
+     * When configured, content is transformed (e.g., links rewritten) before
+     * computing the content hash, chunking, embedding, and persisting.
+     * This means the stored chunks contain the transformed content, and the
+     * content hash reflects the transformed output (not the raw file content).
+     *
+     * If not provided, content is stored as-is (original behavior).
+     */
+    contentTransform?: ContentTransformOptions;
+    /**
+     * Store full document content in a separate `rag_documents` table.
+     *
+     * When enabled, the complete source document is persisted alongside chunks
+     * so consumers can retrieve the full content after finding relevant chunks
+     * via vector search. Use `getDocument(resourceId)` to retrieve.
+     *
+     * @default false
+     */
+    storeDocuments?: boolean;
 }
 /**
  * LanceDBRAGProvider (generic over metadata type)
@@ -35,6 +56,8 @@ export declare class LanceDBRAGProvider<TMetadata extends Record<string, unknown
     private connection;
     private table;
     private readonly tokenCounter;
+    /** Accumulated document records during indexing, flushed in indexResources() */
+    private pendingDocuments;
     private constructor();
     /**
      * Create and initialize LanceDBRAGProvider
@@ -77,10 +100,36 @@ export declare class LanceDBRAGProvider<TMetadata extends Record<string, unknown
      * Get database statistics
      */
     getStats(): Promise<RAGStats>;
+    /**
+     * Retrieve the full source document by resource ID.
+     *
+     * Only returns data when `storeDocuments: true` was configured and the
+     * rag_documents table exists. Returns `null` if the document is not found.
+     *
+     * @param resourceId - ID of the resource to retrieve
+     * @returns Full document record or null
+     */
+    getDocument(resourceId: string): Promise<DocumentResult | null>;
     /**
      * Index resources into the RAG database
      */
     indexResources(resources: ResourceMetadata[], onProgress?: (progress: IndexProgress) => void): Promise<IndexResult>;
+    /**
+     * Flush accumulated document records to the rag_documents table.
+     *
+     * Uses 'overwrite' mode to replace the entire table on each indexing run.
+     * This is simpler than incremental updates and ensures consistency.
+     */
+    private flushDocumentRecords;
+    /**
+     * Detect whether a resource needs indexing, updating, or can be skipped.
+     *
+     * Queries existing rows for the resource and compares content hashes.
+     * All Arrow data is materialized before returning to avoid buffer lifecycle issues.
+     *
+     * @returns Object with `action` ('skip' | 'update' | 'new') and `deleteCount` (chunks to remove on update)
+     */
+    private detectResourceChangeStatus;
     /**
      * Index a single resource
      */
@@ -90,7 +139,9 @@ export declare class LanceDBRAGProvider<TMetadata extends Record<string, unknown
      */
     updateResource(_resourceId: string): Promise<void>;
     /**
-     * Delete a specific resource and all its chunks
+     * Delete a specific resource and all its chunks.
+     *
+     * Also removes the document record from rag_documents if it exists.
      *
      * @param resourceId - ID of resource to delete
      */

package/dist/lancedb-rag-provider.d.ts.map

@@ -1 +1 @@
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package/dist/lancedb-rag-provider.js

@@ -7,7 +7,8 @@ import fs from 'node:fs';
 import path from 'node:path';
 import * as lancedb from '@lancedb/lancedb';
 import { ApproximateTokenCounter, chunkResource, DefaultRAGMetadataSchema, enrichChunks, generateContentHash, TransformersEmbeddingProvider, } from '@vibe-agent-toolkit/rag';
-import { parseMarkdown } from '@vibe-agent-toolkit/resources';
+import { parseMarkdown, transformContent, } from '@vibe-agent-toolkit/resources';
+import { createDocumentRecord, overlayChunkMetadata } from './document-helpers.js';
 import { buildWhereClause, escapeSQLString } from './filter-builder.js';
 import { chunkToLanceRow, lanceRowToChunk, } from './schema.js';
 /**
@@ -39,6 +40,7 @@ function getDirectorySize(dirPath) {
     return totalSize;
 }
 const TABLE_NAME = 'rag_chunks';
+const DOCUMENTS_TABLE_NAME = 'rag_documents';
 /**
  * LanceDBRAGProvider (generic over metadata type)
  *
@@ -51,6 +53,8 @@ export class LanceDBRAGProvider {
     connection = null;
     table = null;
     tokenCounter = new ApproximateTokenCounter();
+    /** Accumulated document records during indexing, flushed in indexResources() */
+    pendingDocuments = [];
     constructor(config) {
         this.config = {
             readonly: false,
@@ -58,6 +62,7 @@ export class LanceDBRAGProvider {
             targetChunkSize: 512,
             paddingFactor: 0.9,
             metadataSchema: DefaultRAGMetadataSchema,
+            storeDocuments: false,
             ...config,
         };
         this.metadataSchema = this.config.metadataSchema;
@@ -186,6 +191,59 @@ export class LanceDBRAGProvider {
             lastIndexed: new Date(), // Would need to track this separately
         };
     }
+    /**
+     * Retrieve the full source document by resource ID.
+     *
+     * Only returns data when `storeDocuments: true` was configured and the
+     * rag_documents table exists. Returns `null` if the document is not found.
+     *
+     * @param resourceId - ID of the resource to retrieve
+     * @returns Full document record or null
+     */
+    async getDocument(resourceId) {
+        if (!this.connection) {
+            return null;
+        }
+        let docsTable;
+        try {
+            const tableNames = await this.connection.tableNames();
+            if (!tableNames.includes(DOCUMENTS_TABLE_NAME)) {
+                return null;
+            }
+            docsTable = await this.connection.openTable(DOCUMENTS_TABLE_NAME);
+        }
+        catch {
+            return null; // Table doesn't exist or connection error
+        }
+        const rows = await docsTable.query()
+            .where(`resourceid = '${escapeSQLString(resourceId)}'`)
+            .limit(1)
+            .toArray();
+        if (rows.length === 0) {
+            return null;
+        }
+        // Materialize immediately to avoid Arrow buffer issues
+        // eslint-disable-next-line unicorn/prefer-structured-clone -- JSON.parse/stringify is intentional workaround for Arrow buffer lifecycle bug
+        const row = JSON.parse(JSON.stringify(rows[0]));
+        // Extract metadata fields from the row using the metadata schema
+        const metadata = {};
+        for (const key of Object.keys(this.metadataSchema.shape)) {
+            const lowercaseKey = key.toLowerCase();
+            if (lowercaseKey in row) {
+                metadata[key] = row[lowercaseKey];
+            }
+        }
+        return {
+            resourceId: row.resourceid,
+            filePath: row.filepath,
+            content: row.content,
+            contentHash: row.contenthash,
+            tokenCount: row.tokencount,
+            totalChunks: row.totalchunks,
+            indexedAt: new Date(row.indexedat),
+            metadata,
+        };
+    }
     /**
      * Index resources into the RAG database
      */
@@ -193,6 +251,8 @@ export class LanceDBRAGProvider {
         if (this.config.readonly) {
             throw new Error('Cannot index in readonly mode');
         }
+        // Reset pending documents for this indexing batch
+        this.pendingDocuments = [];
         const startTime = Date.now();
         const totalResources = resources.length;
         const result = {
@@ -236,46 +296,84 @@ export class LanceDBRAGProvider {
                 });
             }
         }
+        // Flush accumulated document records to rag_documents table
+        if (this.config.storeDocuments && this.pendingDocuments.length > 0 && this.connection) {
+            await this.flushDocumentRecords();
+        }
         result.durationMs = Date.now() - startTime;
         return result;
     }
+    /**
+     * Flush accumulated document records to the rag_documents table.
+     *
+     * Uses 'overwrite' mode to replace the entire table on each indexing run.
+     * This is simpler than incremental updates and ensures consistency.
+     */
+    async flushDocumentRecords() {
+        if (!this.connection || this.pendingDocuments.length === 0) {
+            return;
+        }
+        const tableNames = await this.connection.tableNames();
+        if (tableNames.includes(DOCUMENTS_TABLE_NAME)) {
+            // Merge: load existing documents, replace those with matching resourceIds, keep the rest
+            const existingTable = await this.connection.openTable(DOCUMENTS_TABLE_NAME);
+            const existingRows = await existingTable.query().where('1 = 1').toArray();
+            // eslint-disable-next-line unicorn/prefer-structured-clone -- JSON.parse/stringify is intentional workaround for Arrow buffer lifecycle bug
+            const existing = JSON.parse(JSON.stringify(existingRows));
+            const pendingIds = new Set(this.pendingDocuments.map((d) => d.resourceid));
+            const retained = existing.filter((row) => !pendingIds.has(row.resourceid));
+            const merged = [...retained, ...this.pendingDocuments];
+            await this.connection.createTable(DOCUMENTS_TABLE_NAME, merged, { mode: 'overwrite' });
+        }
+        else {
+            await this.connection.createTable(DOCUMENTS_TABLE_NAME, this.pendingDocuments);
+        }
+        this.pendingDocuments = [];
+    }
+    /**
+     * Detect whether a resource needs indexing, updating, or can be skipped.
+     *
+     * Queries existing rows for the resource and compares content hashes.
+     * All Arrow data is materialized before returning to avoid buffer lifecycle issues.
+     *
+     * @returns Object with `action` ('skip' | 'update' | 'new') and `deleteCount` (chunks to remove on update)
+     */
+    async detectResourceChangeStatus(resourceId, contentHash) {
+        if (!this.table) {
+            return { action: 'new', deleteCount: 0 };
+        }
+        const existingRows = await this.table.query().where(`resourceid = '${escapeSQLString(resourceId)}'`).toArray();
+        // Materialize immediately to avoid Arrow buffer issues
+        // eslint-disable-next-line unicorn/prefer-structured-clone -- JSON.parse/stringify is intentional workaround for Arrow buffer lifecycle bug
+        const existing = JSON.parse(JSON.stringify(existingRows));
+        if (existing.length === 0) {
+            return { action: 'new', deleteCount: 0 };
+        }
+        const existingHash = existing[0]?.resourcecontenthash;
+        if (existingHash === contentHash) {
+            return { action: 'skip', deleteCount: existing.length };
+        }
+        return { action: 'update', deleteCount: existing.length };
+    }
     /**
      * Index a single resource
      */
     async indexResource(resource, result) {
         // Read file content using parseMarkdown
         const parseResult = await parseMarkdown(resource.filePath);
-        // Generate content hash for change detection
-        const resourceContentHash = generateContentHash(parseResult.content);
-        // Check if resource already exists with same content hash
-        // Extract all needed data BEFORE any table modifications to avoid Arrow buffer issues
-        let shouldSkip = false;
-        let deleteCount = 0;
-        let shouldUpdate = false;
-        if (this.table) {
-            const existingRows = await this.table.query().where(`resourceid = '${escapeSQLString(resource.id)}'`).toArray();
-            // Materialize immediately to avoid Arrow buffer issues
-            // eslint-disable-next-line unicorn/prefer-structured-clone -- JSON.parse/stringify is intentional workaround for Arrow buffer lifecycle bug
-            const existing = JSON.parse(JSON.stringify(existingRows));
-            // Extract data immediately while Arrow buffers are valid
-            if (existing.length > 0) {
-                const existingHash = existing[0]?.resourcecontenthash;
-                deleteCount = existing.length;
-                if (existingHash === resourceContentHash) {
-                    shouldSkip = true;
-                }
-                else {
-                    shouldUpdate = true;
-                }
-            }
-        }
-        // Handle skip case
-        if (shouldSkip) {
+        // Apply content transform if configured (e.g., rewrite links before chunking)
+        const content = this.config.contentTransform
+            ? transformContent(parseResult.content, resource.links, this.config.contentTransform)
+            : parseResult.content;
+        // Generate content hash for change detection (based on transformed content)
+        const resourceContentHash = generateContentHash(content);
+        // Detect whether this resource is new, unchanged (skip), or updated
+        const { action, deleteCount } = await this.detectResourceChangeStatus(resource.id, resourceContentHash);
+        if (action === 'skip') {
             result.resourcesSkipped++;
             return;
         }
-        // Delete old chunks if updating
-        if (shouldUpdate) {
+        if (action === 'update') {
             await this.deleteResource(resource.id);
             result.chunksDeleted += deleteCount;
             result.resourcesUpdated++;
@@ -283,7 +381,7 @@ export class LanceDBRAGProvider {
         // Chunk the resource
         const chunkingResult = chunkResource({
             ...resource,
-            content: parseResult.content,
+            content,
             frontmatter: {},
         }, {
             targetChunkSize: this.config.targetChunkSize,
@@ -294,26 +392,9 @@ export class LanceDBRAGProvider {
         // Embed chunks
         const embeddings = await this.config.embeddingProvider.embedBatch(chunkingResult.chunks.map((c) => c.content));
         // Enrich chunks with full metadata
-        const chunkableResource = {
-            ...resource,
-            content: parseResult.content,
-            frontmatter: {},
-        };
-        const ragChunks = enrichChunks(chunkingResult.chunks, chunkableResource, embeddings, this.config.embeddingProvider.model);
+        const ragChunks = enrichChunks(chunkingResult.chunks, { ...resource, content, frontmatter: {} }, embeddings, this.config.embeddingProvider.model, this.tokenCounter);
         // Add custom metadata from resource.frontmatter to each chunk
-        // This allows custom metadata schemas to extract additional fields beyond the default ones
-        const chunksWithMetadata = ragChunks.map((chunk) => {
-            const chunkWithMetadata = { ...chunk };
-            // Add metadata fields from frontmatter according to the schema
-            if (resource.frontmatter) {
-                for (const key of Object.keys(this.metadataSchema.shape)) {
-                    if (key in resource.frontmatter) {
-                        chunkWithMetadata[key] = resource.frontmatter[key];
-                    }
-                }
-            }
-            return chunkWithMetadata;
-        });
+        const chunksWithMetadata = overlayChunkMetadata(ragChunks, resource.frontmatter, this.metadataSchema);
         // Convert to LanceDB rows using the metadata schema
         const rows = chunksWithMetadata.map((chunk) => chunkToLanceRow(chunk, resourceContentHash, this.metadataSchema));
         // INSERT into LanceDB
@@ -323,6 +404,10 @@ export class LanceDBRAGProvider {
         else if (this.table) {
             await this.table.add(rows);
         }
+        // Accumulate document record for rag_documents table
+        if (this.config.storeDocuments) {
+            this.pendingDocuments.push(createDocumentRecord(resource, content, resourceContentHash, rows.length, this.tokenCounter, this.metadataSchema));
+        }
         result.resourcesIndexed++;
         result.chunksCreated += rows.length;
     }
@@ -333,7 +418,9 @@ export class LanceDBRAGProvider {
         throw new Error('Not implemented - use indexResources() instead');
     }
     /**
-     * Delete a specific resource and all its chunks
+     * Delete a specific resource and all its chunks.
+     *
+     * Also removes the document record from rag_documents if it exists.
      *
      * @param resourceId - ID of resource to delete
      */
@@ -346,6 +433,19 @@ export class LanceDBRAGProvider {
         }
         // Delete chunks (use lowercase column names)
         await this.table.delete(`resourceid = '${escapeSQLString(resourceId)}'`);
+        // Also delete from rag_documents table if it exists
+        if (this.connection) {
+            try {
+                const tableNames = await this.connection.tableNames();
+                if (tableNames.includes(DOCUMENTS_TABLE_NAME)) {
+                    const docsTable = await this.connection.openTable(DOCUMENTS_TABLE_NAME);
+                    await docsTable.delete(`resourceid = '${escapeSQLString(resourceId)}'`);
+                }
+            }
+            catch {
+                // Documents table may not exist; ignore
+            }
+        }
     }
     /**
      * Clear the entire database

package/dist/lancedb-rag-provider.js.map

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package/dist/schema.d.ts

@@ -38,6 +38,8 @@ export type LanceDBRow<TMetadata extends Record<string, unknown> = DefaultRAGMet
     content: string;
     contenthash: string;
     tokencount: number;
+    chunkindex: number;
+    totalchunks: number;
     embeddingmodel: string;
     embeddedat: number;
     previouschunkid: string;

package/dist/schema.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"schema.d.ts","sourceRoot":"","sources":["../src/schema.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,KAAK,EAAE,YAAY,EAAE,kBAAkB,EAAE,QAAQ,EAAE,MAAM,yBAAyB,CAAC;AAG1F,OAAO,KAAK,EAAE,SAAS,EAAE,WAAW,EAAc,MAAM,KAAK,CAAC;AAE9D;;;;;;;;GAQG;AACH,MAAM,MAAM,kBAAkB,CAAC,CAAC,SAAS,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,IAAI;KACjE,CAAC,IAAI,MAAM,CAAC,IAAI,SAAS,CAAC,MAAM,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,SAAS,KAAK,CAAC,MAAM,EAAE,CAAC,GACjE,MAAM,GACN,CAAC,CAAC,CAAC,CAAC,SAAS,IAAI,GACf,MAAM,GACN,CAAC,CAAC,CAAC,CAAC,SAAS,MAAM,GACjB,MAAM,GACN,CAAC,CAAC,CAAC,CAAC,SAAS,MAAM,GAAG,SAAS,GAC7B,MAAM,GACN,CAAC,CAAC,CAAC,CAAC,SAAS,MAAM,GAAG,SAAS,GAC7B,MAAM,GACN,CAAC,CAAC,CAAC,CAAC;CACjB,CAAC;AAEF;;;;;;;;;;;;GAYG;AACH,MAAM,MAAM,UAAU,CAAC,SAAS,SAAS,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,GAAG,kBAAkB,IAAI;IAEvF,MAAM,EAAE,MAAM,EAAE,CAAC;IAGjB,OAAO,EAAE,MAAM,CAAC;IAChB,UAAU,EAAE,MAAM,CAAC;IACnB,OAAO,EAAE,MAAM,CAAC;IAChB,WAAW,EAAE,MAAM,CAAC;IACpB,UAAU,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;IACnB,WAAW,EAAE,MAAM,CAAC;IACpB,cAAc,EAAE,MAAM,CAAC;IACvB,UAAU,EAAE,MAAM,CAAC;IACnB,eAAe,EAAE,MAAM,CAAC;IACxB,WAAW,EAAE,MAAM,CAAC;IAGpB,mBAAmB,EAAE,MAAM,CAAC;IAG5B,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB,GAAG,kBAAkB,CAAC,SAAS,CAAC,CAAC;AAsOlC;;;;GAIG;AACH,wBAAgB,iBAAiB,CAAC,SAAS,SAAS,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EACzE,QAAQ,EAAE,SAAS,EACnB,MAAM,EAAE,SAAS,CAAC,WAAW,CAAC,GAC7B,kBAAkB,CAAC,SAAS,CAAC,CAU/B;AAED;;;;GAIG;AACH,wBAAgB,mBAAmB,CAAC,SAAS,SAAS,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAC3E,UAAU,EAAE,kBAAkB,CAAC,SAAS,CAAC,EACzC,MAAM,EAAE,SAAS,CAAC,WAAW,CAAC,GAC7B,SAAS,CAeX;AAED;;;;;;;;;;;;GAYG;AACH,wBAAgB,eAAe,CAAC,SAAS,SAAS,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EACvE,KAAK,EAAE,YAAY,GAAG,SAAS,EAC/B,mBAAmB,EAAE,MAAM,EAC3B,cAAc,EAAE,SAAS,CAAC,WAAW,CAAC,GACrC,UAAU,CAAC,SAAS,CAAC,CAgCvB;AAED;;;;;;;;;;;GAWG;AACH,wBAAgB,eAAe,CAAC,SAAS,SAAS,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EACvE,GAAG,EAAE,UAAU,CAAC,SAAS,CAAC,EAC1B,cAAc,EAAE,SAAS,CAAC,WAAW,CAAC,GACrC,YAAY,GAAG,SAAS,CA2D1B;AAED;;;;;;;;;GASG;AACH,wBAAgB,kCAAkC,CAChD,KAAK,EAAE,QAAQ,EACf,mBAAmB,EAAE,MAAM,GAC1B,UAAU,CAAC,kBAAkB,CAAC,CAEhC;AAED;;;;;;;;GAQG;AACH,wBAAgB,kCAAkC,CAAC,GAAG,EAAE,UAAU,CAAC,kBAAkB,CAAC,GAAG,QAAQ,CAEhG"}

package/dist/schema.js

@@ -279,9 +279,13 @@ export function chunkToLanceRow(chunk, resourceContentHash, metadataSchema) {
         }
     }
     const serializedMetadata = serializeMetadata(metadata, metadataSchema);
-    // Spread metadata fields at top level for efficient filtering
-    // Use lowercase for all column names (SQL convention)
+    // Spread metadata first, then core fields override any collisions.
+    // This prevents custom metadata schemas that reuse core column names
+    // (e.g., chunkindex, totalchunks) from overwriting correctly populated values.
+    // Use lowercase for all column names (SQL convention).
+    // Type assertion needed: TS cannot verify intersection of explicit props + generic spread
     return {
+        ...serializedMetadata,
         vector: chunk.embedding,
         chunkid: chunk.chunkId,
         resourceid: chunk.resourceId,
@@ -289,12 +293,12 @@ export function chunkToLanceRow(chunk, resourceContentHash, metadataSchema) {
         contenthash: chunk.contentHash,
         resourcecontenthash: resourceContentHash,
         tokencount: chunk.tokenCount,
+        chunkindex: chunk.chunkIndex ?? -1,
+        totalchunks: chunk.totalChunks ?? -1,
         embeddingmodel: chunk.embeddingModel,
         embeddedat: chunk.embeddedAt.getTime(),
         previouschunkid: chunk.previousChunkId ?? '',
         nextchunkid: chunk.nextChunkId ?? '',
-        // Spread serialized metadata fields as top-level columns (already lowercase)
-        ...serializedMetadata,
     };
 }
 /**
@@ -322,6 +326,15 @@ export function lanceRowToChunk(row, metadataSchema) {
         embeddingModel: rowData['embeddingmodel'],
         embeddedAt: new Date(rowData['embeddedat']),
     };
+    // Add chunk position fields if present
+    const chunkIndex = rowData['chunkindex'];
+    if (chunkIndex >= 0) {
+        coreChunk.chunkIndex = chunkIndex;
+    }
+    const totalChunks = rowData['totalchunks'];
+    if (totalChunks >= 0) {
+        coreChunk.totalChunks = totalChunks;
+    }
     // Add optional context fields if present
     const previousChunkId = rowData['previouschunkid'];
     if (previousChunkId && previousChunkId.length > 0) {

package/dist/schema.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@vibe-agent-toolkit/rag-lancedb",
-  "version": "0.1.12",
+  "version": "0.1.14",
   "type": "module",
   "description": "LanceDB implementation of RAG interfaces for vibe-agent-toolkit",
   "keywords": [
@@ -34,9 +34,9 @@
   },
   "dependencies": {
     "@lancedb/lancedb": "^0.23.0",
-    "@vibe-agent-toolkit/rag": "0.1.12",
-    "@vibe-agent-toolkit/resources": "0.1.12",
-    "@vibe-agent-toolkit/utils": "0.1.12",
+    "@vibe-agent-toolkit/rag": "0.1.14",
+    "@vibe-agent-toolkit/resources": "0.1.14",
+    "@vibe-agent-toolkit/utils": "0.1.14",
     "apache-arrow": "^18.1.0",
     "zod": "^3.24.1"
   },