@vibe-agent-toolkit/cli 0.1.41-rc.6 → 0.1.41-rc.8

package/dist/commands/audit/hierarchical-output.js.map

@@ -1 +1 @@
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package/dist/commands/audit-settings.d.ts

@@ -3,6 +3,7 @@
  *
  * Shows effective merged Claude settings with provenance, or validates a specific file.
  */
+import { type ProvenanceValue, type RuleConflict, type SettingsFinding, type SettingsPathEntry } from '@vibe-agent-toolkit/claude-marketplace';
 import { Command } from 'commander';
 export interface AuditSettingsOptions {
     showPaths?: boolean;
@@ -10,6 +11,40 @@ export interface AuditSettingsOptions {
     type?: 'managed' | 'user' | 'project';
     debug?: boolean;
 }
+/** A formatted provenance value; `overrode` recurses down the whole chain. */
+export interface FormattedProvenanceValue {
+    value: unknown;
+    source: string;
+    level: string;
+    locked?: boolean;
+    overrode?: FormattedProvenanceValue;
+}
+/**
+ * Format an EffectiveSettings value for YAML output, INCLUDING what it overrode.
+ *
+ * The chain is the point: "what is in effect, and what did it replace?" is the
+ * question a settings-override audit exists to answer. Emitting only the winning
+ * layer made a project override look like the only value ever declared — the
+ * merger builds the linked list and this formatter used to throw it away.
+ */
+export declare function formatProvenanceValue(pv: ProvenanceValue<unknown>): FormattedProvenanceValue;
+/**
+ * Format a resolved settings path for YAML output.
+ *
+ * `exists`/`readable` are passed through verbatim, including the
+ * `'undetermined'` value — a probe that could not run must not be rendered as a
+ * confident `false`.
+ */
+export declare function formatSettingsPathEntry(p: SettingsPathEntry): Record<string, unknown>;
+/**
+ * The findings an effective-settings audit produced.
+ *
+ * A shadowed rule and a marketplace that cannot authenticate are things the
+ * reader must act on, so they are warnings — the run used to publish
+ * `status: 'success'` with the conflicts listed underneath it, which is the
+ * "warnings read as passed" collapse this command is being fixed for.
+ */
+export declare function settingsAuditFindings(conflicts: readonly RuleConflict[], marketplaceWarnings: readonly string[]): SettingsFinding[];
 export declare function runAuditSettings(options: AuditSettingsOptions): Promise<void>;
 /**
  * Create the `vat audit settings` subcommand.

package/dist/commands/audit-settings.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"audit-settings.d.ts","sourceRoot":"","sources":["../../src/commands/audit-settings.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AAEH,OAAO,EAQL,KAAK,eAAe,EACpB,KAAK,YAAY,EACjB,KAAK,eAAe,EACpB,KAAK,iBAAiB,EACvB,MAAM,wCAAwC,CAAC;AAChD,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAMpC,MAAM,WAAW,oBAAoB;IACnC,SAAS,CAAC,EAAE,OAAO,CAAC;IACpB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,SAAS,GAAG,MAAM,GAAG,SAAS,CAAC;IACtC,KAAK,CAAC,EAAE,OAAO,CAAC;CACjB;AAID,8EAA8E;AAC9E,MAAM,WAAW,wBAAwB;IACvC,KAAK,EAAE,OAAO,CAAC;IACf,MAAM,EAAE,MAAM,CAAC;IACf,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,QAAQ,CAAC,EAAE,wBAAwB,CAAC;CACrC;AAED;;;;;;;GAOG;AACH,wBAAgB,qBAAqB,CACnC,EAAE,EAAE,eAAe,CAAC,OAAO,CAAC,GAC3B,wBAAwB,CAQ1B;AAED;;;;;;GAMG;AACH,wBAAgB,uBAAuB,CAAC,CAAC,EAAE,iBAAiB,GAAG,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAYrF;AA6LD;;;;;;;GAOG;AACH,wBAAgB,qBAAqB,CACnC,SAAS,EAAE,SAAS,YAAY,EAAE,EAClC,mBAAmB,EAAE,SAAS,MAAM,EAAE,GACrC,eAAe,EAAE,CAcnB;AA8DD,wBAAsB,gBAAgB,CACpC,OAAO,EAAE,oBAAoB,GAC5B,OAAO,CAAC,IAAI,CAAC,CAWf;AAED;;GAEG;AACH,wBAAgB,0BAA0B,IAAI,OAAO,CA8DpD"}

package/dist/commands/audit-settings.js

@@ -3,77 +3,108 @@
  *
  * Shows effective merged Claude settings with provenance, or validates a specific file.
  */
-import { analyzeRuleConflicts, auditSettings, getSettingsFileFields, resolveSettingsPaths, validateSettingsFile, } from '@vibe-agent-toolkit/claude-marketplace';
+import { analyzeRuleConflicts, auditSettings, getSettingsFileFields, resolveSettingsPaths, summarizeSettingsFindings, validateSettingsFile, } from '@vibe-agent-toolkit/claude-marketplace';
 import { Command } from 'commander';
 import { handleCommandError } from '../utils/command-error.js';
 import { createLogger } from '../utils/logger.js';
 import { writeYamlOutput } from '../utils/output.js';
 /**
- * Format an EffectiveSettings value for YAML output.
- * Returns a simplified object with `value`, `source`, and `level`.
+ * Format an EffectiveSettings value for YAML output, INCLUDING what it overrode.
+ *
+ * The chain is the point: "what is in effect, and what did it replace?" is the
+ * question a settings-override audit exists to answer. Emitting only the winning
+ * layer made a project override look like the only value ever declared — the
+ * merger builds the linked list and this formatter used to throw it away.
  */
-function formatProvenanceValue(pv) {
+export function formatProvenanceValue(pv) {
     return {
         value: pv.value,
         source: pv.provenance.file,
         level: pv.provenance.level,
         ...(pv.provenance.level === 'managed' ? { locked: true } : {}),
+        ...(pv.overrode ? { overrode: formatProvenanceValue(pv.overrode) } : {}),
+    };
+}
+/**
+ * Format a resolved settings path for YAML output.
+ *
+ * `exists`/`readable` are passed through verbatim, including the
+ * `'undetermined'` value — a probe that could not run must not be rendered as a
+ * confident `false`.
+ */
+export function formatSettingsPathEntry(p) {
+    return {
+        label: p.label,
+        path: p.path,
+        exists: p.exists,
+        readable: p.readable,
+        level: p.level,
+        ...(p.accessError === undefined ? {} : { accessError: p.accessError }),
+        ...(p.status === 'error' && p.exists !== false
+            ? { status: 'error', message: p.message }
+            : {}),
     };
 }
 async function runShowPaths(startTime, logger) {
     const cwd = process.cwd();
     const result = await resolveSettingsPaths(cwd);
-    const hasLegacyError = result.paths.some((p) => p.status === 'error' && p.exists);
+    const findings = [];
+    for (const p of result.paths) {
+        if (p.status === 'error' && p.exists !== false) {
+            findings.push({
+                path: p.path,
+                message: p.message ?? 'Deprecated settings path is present',
+                severity: 'error',
+            });
+        }
+        if (p.exists === 'undetermined' || p.readable === 'undetermined') {
+            findings.push({
+                path: p.path,
+                message: `Could not determine access (${p.accessError ?? 'unknown error'}) — this path was not checked`,
+                severity: 'warning',
+            });
+        }
+    }
+    const { status, issueCounts } = summarizeSettingsFindings(findings);
     writeYamlOutput({
-        status: hasLegacyError ? 'error' : 'success',
-        paths: result.paths.map((p) => ({
-            label: p.label,
-            path: p.path,
-            exists: p.exists,
-            readable: p.readable,
-            level: p.level,
-            ...(p.status === 'error' && p.exists
-                ? { status: 'error', message: p.message }
-                : {}),
-        })),
+        status,
+        issueCounts,
+        paths: result.paths.map(formatSettingsPathEntry),
         duration: `${Date.now() - startTime}ms`,
     });
-    if (hasLegacyError) {
+    if (issueCounts.errors > 0) {
         logger.error('Legacy managed-settings.json path detected — IT admin must migrate.');
         process.exit(1);
     }
+    if (issueCounts.warnings > 0) {
+        logger.warn(`${issueCounts.warnings} settings path(s) could not be checked.`);
+    }
     process.exit(0);
 }
 async function runValidateFile(options, startTime, logger) {
     // eslint-disable-next-line @typescript-eslint/no-non-null-assertion -- guarded by caller
     const filePath = options.file;
     const result = await validateSettingsFile(filePath, options.type);
-    const fields = result.valid ? await getSettingsFileFields(filePath) : [];
+    // `null` means the fields could not be read — distinct from "no fields", and
+    // emitted as `fields: null` rather than as an empty list.
+    const fields = await getSettingsFileFields(filePath);
     const duration = `${Date.now() - startTime}ms`;
-    if (result.valid) {
-        writeYamlOutput({
-            status: 'success',
-            file: filePath,
-            detectedType: result.detectedType,
-            valid: true,
-            fields,
-            duration,
-        });
-        logger.info(`Settings file is valid (${result.detectedType})`);
-        process.exit(0);
-    }
-    else {
-        writeYamlOutput({
-            status: 'error',
-            file: filePath,
-            detectedType: result.detectedType,
-            valid: false,
-            errors: result.errors,
-            duration,
-        });
-        logger.error(`Settings file is invalid: ${result.errors.length} error(s)`);
+    writeYamlOutput({
+        status: result.status,
+        issueCounts: result.issueCounts,
+        file: filePath,
+        detectedType: result.detectedType,
+        typeConfidence: result.typeConfidence,
+        fields,
+        ...(result.findings.length > 0 ? { findings: result.findings } : {}),
+        duration,
+    });
+    if (result.issueCounts.errors > 0) {
+        logger.error(`Settings file is invalid: ${result.issueCounts.errors} error(s)`);
         process.exit(1);
     }
+    logger.info(`Settings file is valid (${result.detectedType}, type ${result.typeConfidence})`);
+    process.exit(0);
 }
 function buildPermissionsSummary(permissions) {
     const summary = {};
@@ -105,6 +136,7 @@ function buildPermissionsSummary(permissions) {
 }
 function buildMarketplacesSummary(effective) {
     const summary = {};
+    const marketplaceWarnings = [];
     if (effective.extraKnownMarketplaces) {
         const pv = effective.extraKnownMarketplaces;
         const registered = Object.entries(pv.value).map(([name, entry]) => ({
@@ -117,14 +149,13 @@ function buildMarketplacesSummary(effective) {
             summary['registered'] = registered;
         }
         // Check for GitHub repos without GITHUB_TOKEN
-        const warnings = [];
         for (const [name, entry] of Object.entries(pv.value)) {
             if (entry.source.source === 'github' && !process.env['GITHUB_TOKEN']) {
-                warnings.push(`Marketplace '${name}' sources from a private GitHub repo but GITHUB_TOKEN is not set`);
+                marketplaceWarnings.push(`Marketplace '${name}' sources from a private GitHub repo but GITHUB_TOKEN is not set`);
             }
         }
-        if (warnings.length > 0) {
-            summary['warnings'] = warnings;
+        if (marketplaceWarnings.length > 0) {
+            summary['warnings'] = marketplaceWarnings;
         }
     }
     if (effective.enabledPlugins) {
@@ -143,7 +174,7 @@ function buildMarketplacesSummary(effective) {
             layer: pv.provenance.level,
         };
     }
-    return summary;
+    return { summary, warnings: marketplaceWarnings };
 }
 function formatConflicts(conflicts) {
     return conflicts.map(c => ({
@@ -172,6 +203,26 @@ function getShadowedByList(kind) {
         return 'ask';
     return 'same-bucket';
 }
+/**
+ * The findings an effective-settings audit produced.
+ *
+ * A shadowed rule and a marketplace that cannot authenticate are things the
+ * reader must act on, so they are warnings — the run used to publish
+ * `status: 'success'` with the conflicts listed underneath it, which is the
+ * "warnings read as passed" collapse this command is being fixed for.
+ */
+export function settingsAuditFindings(conflicts, marketplaceWarnings) {
+    const findings = conflicts.map(c => ({
+        path: c.rule.provenance.file,
+        message: `Rule "${c.rule.rule}" (${c.rule.provenance.level}, ${getRuleList(c.kind)}) is shadowed by ` +
+            `"${c.shadowedBy.rule}" (${c.shadowedBy.provenance.level}, ${getShadowedByList(c.kind)}) — ${c.kind}.`,
+        severity: 'warning',
+    }));
+    for (const warning of marketplaceWarnings) {
+        findings.push({ path: '', message: warning, severity: 'warning' });
+    }
+    return findings;
+}
 async function runShowEffective(startTime, logger) {
     const cwd = process.cwd();
     const { effective, layers } = await auditSettings({ projectDir: cwd });
@@ -200,13 +251,15 @@ async function runShowEffective(startTime, logger) {
     if (Object.keys(permissionsSummary).length > 0) {
         effectiveSummary['permissions'] = permissionsSummary;
     }
-    const marketplacesSummary = buildMarketplacesSummary(effective);
-    if (Object.keys(marketplacesSummary).length > 0) {
-        effectiveSummary['marketplaces'] = marketplacesSummary;
+    const marketplaces = buildMarketplacesSummary(effective);
+    if (Object.keys(marketplaces.summary).length > 0) {
+        effectiveSummary['marketplaces'] = marketplaces.summary;
     }
     const conflicts = analyzeRuleConflicts(effective);
+    const { status, issueCounts } = summarizeSettingsFindings(settingsAuditFindings(conflicts, marketplaces.warnings));
     const output = {
-        status: 'success',
+        status,
+        issueCounts,
         layers: layersSummary,
         effectiveSettings: effectiveSummary,
         duration,
@@ -221,6 +274,9 @@ async function runShowEffective(startTime, logger) {
     else {
         logger.info(`Loaded ${layers.length} settings layer(s)`);
     }
+    if (issueCounts.warnings > 0) {
+        logger.warn(`${issueCounts.warnings} warning(s): see conflicts / marketplaces.warnings in the output.`);
+    }
     process.exit(0);
 }
 export async function runAuditSettings(options) {
@@ -264,13 +320,27 @@ Description:
   redundant rules within the same bucket.
 
 Output:
+  - status: worst actionable severity (success | warning | error)
+  - issueCounts: errors / warnings / info counts, published beside the status
   - layers: all loaded settings files in precedence order (highest first)
-  - effectiveSettings: merged values with source file and level for each field
+  - effectiveSettings: merged values with source file and level for each field;
+      each value carries an "overrode" chain naming every value it replaced,
+      down to the lowest-precedence layer
   - permissions: accumulated allow/deny/ask rules from all layers
   - conflicts: rules that are unreachable or redundant (omitted if none)
 
+  With --file, "typeConfidence" states how the settings type was determined:
+  declared (you passed --type), inferred (a managed-only field settled it),
+  ambiguous (user and project share one schema, so it could be either), or
+  undetermined (the file could not be read). "fields: null" means the fields
+  could not be read at all, as distinct from "fields: []" (none declared).
+
+  With --show-paths, "exists"/"readable" may be the string "undetermined" when
+  the probe itself failed (e.g. a permission error on a parent directory) —
+  that is not the same answer as false.
+
 Exit Codes:
-  0 - Success
+  0 - No errors (warnings are reported in issueCounts, not in the exit code)
   1 - Invalid settings file (--file mode) or legacy Windows path detected
   2 - System error
 

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package/dist/commands/audit.d.ts

@@ -2,6 +2,7 @@
  * Audit command - audits plugins, marketplaces, registries, and Agent Skills
  * Top-level command: vat audit [path]
  */
+import { type SeverityCounts } from '@vibe-agent-toolkit/agent-schema';
 import { type SkillPackagingConfig, type ValidationResult } from '@vibe-agent-toolkit/agent-skills';
 import { type CompatibilityResult, type EffectiveSettings } from '@vibe-agent-toolkit/claude-marketplace';
 import { Command } from 'commander';
@@ -30,16 +31,58 @@ export interface VATProjectContext {
  * Top-level command: vat audit [path]
  */
 export declare function createAuditCommand(): Command;
+/**
+ * The invocation scan root: the ONE base every `path` and `location` in a
+ * report is expressed relative to.
+ *
+ * This is an ANCHOR, not a validation-policy boundary. Deliberately NOT
+ * {@link deriveConfigRoot} — a config root is discovered per resource by
+ * walking up, and a single `vat audit` spans many of them, so using it as the
+ * anchor emits one document in many coordinate systems. The scan root is
+ * whatever the operator pointed the command at, so it is well defined even
+ * where no config or git root exists at all (auditing `~/.claude`, a plugin
+ * cache, a bare directory of skills).
+ *
+ * A file target anchors at its containing directory, so its own `path` reads as
+ * the bare filename rather than as an empty string.
+ *
+ * @internal Exported so tests and the corpus runner derive the run root the same
+ *   way the command does, instead of hand-rolling a second answer.
+ */
+export declare function deriveScanRoot(targetPath: string): string;
+/**
+ * Run the audit pipeline at `scanPath` and assemble the report document,
+ * without writing anything. The document states its coordinate system once
+ * (`root`) and every `path`/`location` beneath it is relative to that root.
+ *
+ * @internal Exported for integration testing only — not part of the public CLI API.
+ */
+export declare function buildAuditReport(scanPath: string, options: AuditCommandOptions, startTime: number, logger: ReturnType<typeof createLogger>): Promise<{
+    results: ValidationResult[];
+    document: ReturnType<typeof calculateSummary>;
+}>;
 export declare function auditCommand(targetPath: string | undefined, options: AuditCommandOptions): Promise<void>;
 /**
  * @internal Exported for integration testing only — not part of the public CLI API.
+ *
+ * @param locationRoot - The invocation scan root: the ONE base every emitted
+ *   `ValidationIssue.location` in this run is expressed relative to. It is an
+ *   ANCHOR, not a validation-policy boundary — per-skill governing-config
+ *   discovery still decides packaging rules, but it must never decide how a
+ *   location reads, or a run spanning several configs emits one document in
+ *   several coordinate systems. Recursion passes it through unchanged.
  */
-export declare function getValidationResults(scanPath: string, recursive: boolean, options: AuditCommandOptions, logger: ReturnType<typeof createLogger>): Promise<ValidationResult[]>;
+export declare function getValidationResults(scanPath: string, recursive: boolean, options: AuditCommandOptions, logger: ReturnType<typeof createLogger>, locationRoot: string): Promise<ValidationResult[]>;
 /**
  * Run compatibility analysis on plugin results and return a map of path -> CompatibilityResult.
  * Non-plugin results are skipped silently.
  * When effectiveSettings is provided, also runs settings conflict detection.
  *
+ * `locationRoot` is the invocation scan root: the ONE base every emitted
+ * evidence `location.file` is relative to. One audit run spans many plugin
+ * directories, so anchoring evidence at each plugin would mix coordinate
+ * systems in a single document.
+ *
  * When vatContext is provided, config-layer `targets` declarations are
  * threaded through to the analyzer so `vat audit .` inside a VAT project
  * matches `vat skills validate` verdicts. See
@@ -47,7 +90,45 @@ export declare function getValidationResults(scanPath: string, recursive: boolea
  *
  * @internal Exported for integration testing only — not part of the public CLI API.
  */
-export declare function runCompatAnalysis(results: ValidationResult[], logger: ReturnType<typeof createLogger>, effectiveSettings?: EffectiveSettings, vatContext?: VATProjectContext | null): Promise<Map<string, CompatibilityResult>>;
+export declare function runCompatAnalysis(results: ValidationResult[], logger: ReturnType<typeof createLogger>, locationRoot: string, effectiveSettings?: EffectiveSettings, vatContext?: VATProjectContext | null): Promise<Map<string, CompatibilityResult>>;
+declare function calculateSummary(results: ValidationResult[], startTime: number, compatMap: Map<string, CompatibilityResult> | undefined, verbose: boolean, root: string): {
+    files: (ValidationResult & {
+        compatibility?: CompatibilityResult;
+    })[];
+    status: string;
+    summary: FileStatusCounts;
+    issueCounts: SeverityCounts;
+    duration: string;
+    root: string;
+};
+/**
+ * The stderr findings report for a set of audit results — the HUMAN channel.
+ *
+ * Deliberately NOT the YAML document. `vat audit` publishes a machine-readable
+ * report on stdout that CI and tooling parse, and that document carries every
+ * finding at every verbosity; this stream is read by a person, and on a 90-skill
+ * corpus it printed 26,480 lines, 3,480 of them occurrences of a single
+ * high-cardinality warning code. The two channels answer different questions, so
+ * only this one collapses.
+ *
+ * Which findings render in full is not decided here — it is
+ * {@link issuesToRenderAtVerbosity}, shared with the other findings-reporting
+ * verbs so `vat audit`, `vat skills validate` and `vat skills build` cannot drift
+ * onto three answers again. Errors always render; warnings and info collapse
+ * unless `verbose`; allow-listed findings never render.
+ *
+ * The severity breakdown on each file's heading is load-bearing, not decoration.
+ * For a warning-only file at default verbosity that heading is the ENTIRE report
+ * for that file, so dropping the counts would turn the collapse into silence —
+ * the failure direction `issue-rendering.ts` exists to prevent. The trailing
+ * line names the collapsed total and both ways to see it, for the same reason.
+ *
+ * Pure: takes results, returns lines. It reads `issues` and never rewrites it,
+ * because `runAuditAtPath` builds the YAML document from the very same array.
+ *
+ * @internal Exported for unit testing only — not part of the public CLI API.
+ */
+export declare function formatAuditFindingsLines(results: readonly ValidationResult[], root: string, verbose: boolean): string[];
 /**
  * Reset all module-level audit caches. Must be called at the start of every
  * independent audit invocation so in-process callers (CLI entrypoint AND
@@ -55,4 +136,18 @@ export declare function runCompatAnalysis(results: ValidationResult[], logger: R
  * governing configs, or skill-discovery maps from a prior run.
  */
 export declare function resetAuditCaches(): void;
+/**
+ * How many FILES ended in each status. A different denominator from
+ * {@link SeverityCounts}, which counts FINDINGS — hence the `files` prefix on
+ * every field. `summary.warnings: 0` used to sit one line above
+ * `issues.warnings: 1` in the same document: the same word, two units, and no
+ * way for a reader to tell which one they were looking at.
+ */
+interface FileStatusCounts {
+    filesScanned: number;
+    filesPassed: number;
+    filesWithWarnings: number;
+    filesWithErrors: number;
+}
+export {};
 //# sourceMappingURL=audit.d.ts.map

package/dist/commands/audit.d.ts.map

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