@vibe-agent-toolkit/cli 0.1.38 → 0.1.39-rc.10

package/dist/commands/skill/test/index.js

@@ -0,0 +1,16 @@
+/**
+ * `vat skill test` command group — behavioral testing of packaged skills in isolation.
+ */
+import { Command } from 'commander';
+import { createSkillTestConfigureCommand } from './configure.js';
+import { createSkillTestRunCommand } from './run.js';
+export function createSkillTestCommand() {
+    const command = new Command('test');
+    command
+        .description('Behaviorally test a packaged skill in isolation (run) or configure its test block (configure)')
+        .helpCommand(false);
+    command.addCommand(createSkillTestRunCommand());
+    command.addCommand(createSkillTestConfigureCommand());
+    return command;
+}
+//# sourceMappingURL=index.js.map

package/dist/commands/skill/test/index.js.map

@@ -0,0 +1 @@
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package/dist/commands/skill/test/run.d.ts

@@ -0,0 +1,40 @@
+/**
+ * `vat skill test run <skill...>` — execute a packaged skill's eval suite in isolation.
+ *
+ * Thin orchestration layer: parse flags, resolve precedence (flag > config > default),
+ * print the §12 security warning, call runSkillTestHarness, map result/error to exit code.
+ * All domain logic lives in run-harness.ts (agent-skills package).
+ */
+import { Command } from 'commander';
+export interface SkillTestRunOptions {
+    with?: string[];
+    withOptional?: string[];
+    refresh?: boolean;
+    workdir?: string;
+    out?: string;
+    keep?: boolean;
+    dryRun?: boolean;
+    auth?: string;
+    requireAuth?: string;
+    baseline?: boolean;
+    allowUnverifiedSkillSource?: boolean;
+    iUnderstandThisRunsSkillCode?: boolean;
+    model?: string;
+    maxTurns?: string;
+    maxBudgetUsd?: string;
+    timeout?: string;
+    stall?: string;
+    debug?: boolean;
+    env?: string[];
+    passEnv?: string[];
+}
+/**
+ * The unit-testable action for `vat skill test run`. Exported so tests can
+ * call it directly without parsing CLI args. Calls process.exit on completion.
+ *
+ * Note: the security ack enforcement lives inside runSkillTestHarness (domain),
+ * NOT here — this ensures the mock in tests can bypass it cleanly.
+ */
+export declare function runSkillTestRun(skills: string[], options: SkillTestRunOptions): Promise<void>;
+export declare function createSkillTestRunCommand(): Command;
+//# sourceMappingURL=run.d.ts.map

package/dist/commands/skill/test/run.d.ts.map

@@ -0,0 +1 @@
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package/dist/commands/skill/test/run.js

@@ -0,0 +1,381 @@
+/**
+ * `vat skill test run <skill...>` — execute a packaged skill's eval suite in isolation.
+ *
+ * Thin orchestration layer: parse flags, resolve precedence (flag > config > default),
+ * print the §12 security warning, call runSkillTestHarness, map result/error to exit code.
+ * All domain logic lives in run-harness.ts (agent-skills package).
+ */
+import { basename } from 'node:path';
+import { BootstrapNeededError, mapErrorToExitCode, runSkillTestHarness } from '@vibe-agent-toolkit/agent-skills';
+import { findProjectRoot, toForwardSlash } from '@vibe-agent-toolkit/utils';
+import { Command } from 'commander';
+import { loadConfig } from '../../../utils/config-loader.js';
+/** Extract the trailing path segment (cross-platform) from a path-like string. */
+function lastPathSegment(p) {
+    return basename(toForwardSlash(p));
+}
+// ---------------------------------------------------------------------------
+// Security warning (§12)
+// ---------------------------------------------------------------------------
+const SECURITY_WARNING = `
+WARNING: vat skill test run executes arbitrary skill code inside a headless
+Claude session. The experimenter prompt and all staged skill files run with
+bypassPermissions. Pass --i-understand-this-runs-skill-code to acknowledge
+this and proceed.
+`.trim();
+function printSecurityWarning() {
+    process.stderr.write(SECURITY_WARNING + '\n\n');
+}
+// ---------------------------------------------------------------------------
+// Knob coercion helpers
+// ---------------------------------------------------------------------------
+function coercePositiveInt(value, flagName) {
+    if (value === undefined)
+        return undefined;
+    const n = Number.parseInt(value, 10);
+    if (!Number.isInteger(n) || n <= 0) {
+        throw new Error(`${flagName} must be a positive integer. Got: ${value}`);
+    }
+    return n;
+}
+function coercePositiveFloat(value, flagName) {
+    if (value === undefined)
+        return undefined;
+    const n = Number.parseFloat(value);
+    if (!Number.isFinite(n) || n <= 0) {
+        throw new Error(`${flagName} must be a positive number. Got: ${value}`);
+    }
+    return n;
+}
+function coerceKnobs(options) {
+    const result = {};
+    const maxTurns = coercePositiveInt(options.maxTurns, '--max-turns');
+    if (maxTurns !== undefined)
+        result.maxTurns = maxTurns;
+    const maxBudgetUsd = coercePositiveFloat(options.maxBudgetUsd, '--max-budget-usd');
+    if (maxBudgetUsd !== undefined)
+        result.maxBudgetUsd = maxBudgetUsd;
+    const timeout = coercePositiveInt(options.timeout, '--timeout');
+    if (timeout !== undefined)
+        result.timeout = timeout;
+    const stall = coercePositiveInt(options.stall, '--stall');
+    if (stall !== undefined)
+        result.stall = stall;
+    return result;
+}
+/**
+ * Parse a single `name=src` pair into a [name, SkillSourceSpec] tuple. The
+ * source half uses a `kind:value` prefix:
+ *   workspace:foo · npm:@scope/s@1.2.3 · url:https://… · path:../baz · vendored
+ * A bare value without `name=` is rejected — every injected dep needs a name so
+ * the domain can key it (and so the skill resolves under that name in staging).
+ */
+function parseWithPair(pair) {
+    const eq = pair.indexOf('=');
+    if (eq <= 0) {
+        throw new Error(`--with entries must be "name=<src>" (e.g. mydep=workspace:foo, bar=npm:@scope/s@1.2.3, baz=path:../baz). Got: ${pair}`);
+    }
+    const name = pair.slice(0, eq);
+    const src = pair.slice(eq + 1);
+    return [name, parseSourceSpec(src, pair)];
+}
+/** Parse the `kind:value` source half of a --with pair into a SkillSourceSpec. */
+function parseSourceSpec(src, original) {
+    if (src === 'vendored')
+        return { vendored: true };
+    const colon = src.indexOf(':');
+    const kind = colon === -1 ? src : src.slice(0, colon);
+    const value = colon === -1 ? '' : src.slice(colon + 1);
+    switch (kind) {
+        case 'workspace': return requireValue(value, original, () => ({ workspace: value }));
+        case 'npm': return requireValue(value, original, () => ({ npm: value }));
+        case 'path': return requireValue(value, original, () => ({ path: value }));
+        case 'url': return requireValue(value, original, () => ({ url: value }));
+        default:
+            throw new Error(`--with source must start with workspace:|npm:|url:|path:|vendored. Got: ${original}`);
+    }
+}
+function requireValue(value, original, build) {
+    if (!value) {
+        throw new Error(`--with source is missing a value: ${original}`);
+    }
+    return build();
+}
+/** Parse an array of `name=src` flag values into a name→spec record. */
+function parseWithFlags(pairs) {
+    if (pairs === undefined || pairs.length === 0)
+        return undefined;
+    const record = {};
+    for (const pair of pairs) {
+        const [name, spec] = parseWithPair(pair);
+        record[name] = spec;
+    }
+    return record;
+}
+/** Derive a stable name for a config-supplied (nameless) skill source descriptor. */
+function descriptorName(d) {
+    if ('workspace' in d)
+        return d.workspace;
+    if ('npm' in d)
+        return d.npm.replace(/@[^@/]+$/, '');
+    if ('path' in d)
+        return lastPathSegment(d.path) || d.path;
+    if ('url' in d)
+        return 'url-dep';
+    return 'skill-creator';
+}
+/** Map a config descriptor array (with/optional) into a name→spec record. */
+function descriptorsToRecord(list) {
+    if (list === undefined || list.length === 0)
+        return undefined;
+    const record = {};
+    for (const d of list)
+        record[descriptorName(d)] = d;
+    return record;
+}
+// ---------------------------------------------------------------------------
+// Precedence resolution: flag > config > default
+// ---------------------------------------------------------------------------
+/**
+ * Load the persisted `skills.config.<skill>.test` block for the subject skill.
+ * The subject is the first positional skill name (a path or skill key). We key
+ * the config by its basename so `./dist/skills/my-skill/` matches `my-skill`.
+ * Missing config / missing file → undefined (defaults apply).
+ */
+function loadTestConfig(skills) {
+    const projectRoot = findProjectRoot(process.cwd());
+    if (projectRoot === null)
+        return undefined;
+    let config;
+    try {
+        config = loadConfig(projectRoot);
+    }
+    catch {
+        return undefined; // tolerate a broken/absent config → defaults
+    }
+    const perSkill = config?.skills?.config;
+    if (perSkill === undefined)
+        return undefined;
+    const subject = skills[0] ?? '';
+    const base = lastPathSegment(subject) || subject;
+    return perSkill[subject]?.test ?? perSkill[base]?.test;
+}
+/** Resolve the project root used as the harness repoRoot anchor. */
+function resolveRepoRoot() {
+    return findProjectRoot(process.cwd()) ?? process.cwd();
+}
+/** Copy flag-only passthrough options (no config counterpart) onto opts. */
+function applyFlagOnlyOptions(opts, options) {
+    if (options.refresh !== undefined)
+        opts.refresh = options.refresh;
+    if (options.workdir !== undefined)
+        opts.workdir = options.workdir;
+    if (options.out !== undefined)
+        opts.out = options.out;
+    if (options.keep !== undefined)
+        opts.keep = options.keep;
+    if (options.dryRun !== undefined)
+        opts.dryRun = options.dryRun;
+    if (options.allowUnverifiedSkillSource !== undefined)
+        opts.allowUnverifiedSkillSource = options.allowUnverifiedSkillSource;
+    if (options.iUnderstandThisRunsSkillCode !== undefined)
+        opts.acknowledgedRunsSkillCode = options.iUnderstandThisRunsSkillCode;
+}
+/** Apply flag>config merges for scalar knobs (auth, model, baseline, eval/prompt). */
+function applyScalarMerges(opts, options, config) {
+    const authMode = options.auth ?? config?.auth;
+    if (authMode !== undefined)
+        opts.auth = authMode;
+    const authRequirement = options.requireAuth ?? config?.requireAuth;
+    if (authRequirement !== undefined)
+        opts.requireAuth = authRequirement;
+    const baseline = options.baseline ?? config?.baseline;
+    if (baseline !== undefined)
+        opts.baseline = baseline;
+    const model = options.model ?? config?.model;
+    if (model !== undefined)
+        opts.model = model;
+    if (config?.evals !== undefined)
+        opts.evalsSubpath = config.evals;
+    if (config?.experimenterPrompt !== undefined)
+        opts.promptOverride = config.experimenterPrompt;
+    if (config?.build !== undefined)
+        opts.build = config.build;
+}
+/** Apply flag>config merges for numeric knobs (turns/budget/timeout/stall). */
+function applyKnobMerges(opts, knobs, config) {
+    const maxTurns = knobs.maxTurns ?? config?.maxTurns;
+    if (maxTurns !== undefined)
+        opts.maxTurns = maxTurns;
+    const maxBudgetUsd = knobs.maxBudgetUsd ?? config?.maxBudgetUsd;
+    if (maxBudgetUsd !== undefined)
+        opts.maxBudgetUsd = maxBudgetUsd;
+    const timeout = knobs.timeout ?? config?.timeout;
+    if (timeout !== undefined)
+        opts.timeout = timeout;
+    const stall = knobs.stall ?? config?.stall;
+    if (stall !== undefined)
+        opts.stall = stall;
+}
+/**
+ * Parse a single `KEY=VALUE` pair (split on the FIRST `=`, so values may contain
+ * `=`). The key must be non-empty; the value may be empty.
+ */
+function parseEnvPair(pair) {
+    const eq = pair.indexOf('=');
+    if (eq <= 0) {
+        throw new Error(`--env entries must be "KEY=VALUE" (e.g. CUSTOMER_SNAPSHOT_PATH=\${fixturesDir}/snapshot.json). Got: ${pair}`);
+    }
+    return [pair.slice(0, eq), pair.slice(eq + 1)];
+}
+/** Parse repeated `--env KEY=VALUE` flags into a record (undefined when none). */
+function parseEnvFlags(pairs) {
+    if (pairs === undefined || pairs.length === 0)
+        return undefined;
+    const record = {};
+    for (const pair of pairs) {
+        const [key, value] = parseEnvPair(pair);
+        record[key] = value;
+    }
+    return record;
+}
+/** Merge config + CLI `env` maps; CLI wins per-key. undefined when both absent. */
+function mergeEnv(configEnv, cliEnv) {
+    if (configEnv === undefined && cliEnv === undefined)
+        return undefined;
+    return { ...(configEnv ?? {}), ...(cliEnv ?? {}) };
+}
+/** Union config + CLI `passEnv` lists (config first), de-duplicated. */
+function mergePassEnv(configPass, cliPass) {
+    if (configPass === undefined && cliPass === undefined)
+        return undefined;
+    return [...new Set([...(configPass ?? []), ...(cliPass ?? [])])];
+}
+/** Apply flag>config merges for the declared test env (Features A + B). */
+function applyEnvMerges(opts, options, config) {
+    const env = mergeEnv(config?.env, parseEnvFlags(options.env));
+    if (env !== undefined)
+        opts.env = env;
+    const passEnv = mergePassEnv(config?.passEnv, options.passEnv);
+    if (passEnv !== undefined)
+        opts.passEnv = passEnv;
+}
+/** Apply flag>config merges for injected-dependency records. */
+function applyDepMerges(opts, options, config) {
+    const withSources = parseWithFlags(options.with) ?? descriptorsToRecord(config?.with);
+    if (withSources !== undefined)
+        opts.withSources = withSources;
+    const withOptional = parseWithFlags(options.withOptional) ?? descriptorsToRecord(config?.optional);
+    if (withOptional !== undefined)
+        opts.withOptional = withOptional;
+}
+/**
+ * Resolve CLI flags → RunHarnessOptions, applying flag > config > default
+ * precedence. CLI flags win; config (`skills.config.<skill>.test`) fills gaps;
+ * built-in defaults (inside the domain) are the final fallback.
+ */
+function buildHarnessOpts(skills, options, knobs, config) {
+    const repoRoot = resolveRepoRoot();
+    const opts = { skills, repoRoot };
+    // cwd for the pre-stage build hook. repoRoot comes from findProjectRoot, whose
+    // discovery ladder is config-anchored (vibe-agent-toolkit.config.yaml first, then
+    // .git), so the project root IS the directory holding the config — configRoot and
+    // repoRoot are the same dir by construction, not coincidence.
+    opts.configRoot = repoRoot;
+    applyFlagOnlyOptions(opts, options);
+    applyScalarMerges(opts, options, config);
+    applyKnobMerges(opts, knobs, config);
+    applyDepMerges(opts, options, config);
+    applyEnvMerges(opts, options, config);
+    return opts;
+}
+// ---------------------------------------------------------------------------
+// Testable action
+// ---------------------------------------------------------------------------
+/**
+ * The unit-testable action for `vat skill test run`. Exported so tests can
+ * call it directly without parsing CLI args. Calls process.exit on completion.
+ *
+ * Note: the security ack enforcement lives inside runSkillTestHarness (domain),
+ * NOT here — this ensures the mock in tests can bypass it cleanly.
+ */
+export async function runSkillTestRun(skills, options) {
+    printSecurityWarning();
+    const knobs = coerceKnobs(options);
+    const config = loadTestConfig(skills);
+    const harnessOpts = buildHarnessOpts(skills, options, knobs, config);
+    try {
+        const result = await runSkillTestHarness(harnessOpts);
+        process.stderr.write(`Harness: ${result.harnessPath}\n`);
+        process.stdout.write(`Summary: ${result.summary}\n`);
+        process.exit(result.exitCode);
+        return;
+    }
+    catch (err) {
+        const exitCode = mapErrorToExitCode(err);
+        // BootstrapNeededError (exit 3) is the happy "wrote a template, fill it in
+        // and re-run" path — surface its message plainly, not as a hard `Error:`.
+        if (err instanceof BootstrapNeededError) {
+            process.stderr.write(`${err.message}\n`);
+        }
+        else {
+            process.stderr.write(`Error: ${err instanceof Error ? err.message : String(err)}\n`);
+        }
+        process.exit(exitCode);
+        return;
+    }
+}
+// ---------------------------------------------------------------------------
+// Commander command builder
+// ---------------------------------------------------------------------------
+export function createSkillTestRunCommand() {
+    const command = new Command('run');
+    command
+        .description('Execute the eval suite for a packaged skill in a headless Claude sandbox')
+        .argument('<skill...>', 'Skill name(s) to test (primary subject set)')
+        .option('--with <pair...>', 'Inject a declared-dependency skill as name=<src>, where <src> is workspace:<pkg> | npm:<spec> | url:<u> | path:<dir> | vendored (e.g. mydep=npm:@scope/s@1.2.3)')
+        .option('--with-optional <pair...>', 'Inject an optional skill as name=<src> (same syntax as --with)')
+        .option('--env <pair...>', 'Inject an env var into the experimenter spawn as KEY=VALUE (repeatable). Values support ${fixturesDir}, ${stagedSkillDir}, ${harnessRoot}, ${resultsDir}. CLI overrides config for the same key.')
+        .option('--pass-env <key...>', 'Forward a host env var by NAME to the experimenter spawn if present (repeatable). Protected names (PATH, auth, model) are ignored.')
+        .option('--refresh', 'Force a full re-stage (ignore existing staged content)')
+        .option('--workdir <dir>', 'Override the harness working directory')
+        .option('--out <dir>', 'Override the harness output directory')
+        .option('--keep', 'Keep the harness directory after the run')
+        .option('--dry-run', 'Assemble the command without spawning Claude')
+        .option('--auth <mode>', 'Auth mechanism: inherit | subscription | api-key | auto')
+        .option('--require-auth <mech>', 'Require a specific auth mechanism: subscription | api-key')
+        .option('--baseline', 'Enable A/B baseline run (with/without skill)')
+        .option('--allow-unverified-skill-source', 'Skip the vendored manifest integrity check')
+        .option('--i-understand-this-runs-skill-code', 'Acknowledge this command executes skill code (required)')
+        .option('--model <id>', 'Pinned model ID override')
+        .option('--max-turns <n>', 'Cap on experimenter turns (positive integer)')
+        .option('--max-budget-usd <n>', 'Hard USD budget cap (positive number)')
+        .option('--timeout <s>', 'Wall-clock timeout in seconds (positive integer)')
+        .option('--stall <s>', 'Stall-watchdog in seconds (positive integer)')
+        .option('--debug', 'Enable debug logging')
+        .action(runSkillTestRun)
+        .addHelpText('after', `
+Description:
+  Stages the named skill(s) into an isolated tmp directory, runs preflight
+  checks (claude binary, auth, eval inputs, budget), then spawns a headless
+  Claude session with a non-interactive experimenter prompt. The experimenter
+  grades each eval against the skill's expectations and writes grading.json.
+
+  IMPORTANT: This command executes arbitrary skill code. You MUST pass
+  --i-understand-this-runs-skill-code to acknowledge this and proceed.
+
+Exit Codes:
+  0 - Harness ran to completion and produced a valid grading.json (check summary/grading.json for pass/fail counts)
+  1 - Internal error (grading.json absent/invalid, experimenter crash, stall/timeout)
+  2 - Preflight failed (missing binary, auth error, eval inputs absent, unsafe workdir, ack missing)
+  3 - Bootstrap needed: evals.json was absent, so VAT wrote a starter template next to the skill source. Fill it in and re-run.
+
+  Note: eval pass/fail is NOT reflected in the exit code. Read the printed summary
+  ("PASS N/N" or "FAIL N/N") or grading.json to determine whether expectations passed.
+
+Example:
+  $ vat skill test run my-skill --i-understand-this-runs-skill-code
+`);
+    return command;
+}
+//# sourceMappingURL=run.js.map

package/dist/commands/skill/test/run.js.map

@@ -0,0 +1 @@
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package/dist/commands/skills/skill-discovery.d.ts

@@ -9,8 +9,15 @@ import type { DiscoveredSkill } from './command-helpers.js';
 /**
  * Discover skills from config yaml skills section.
  *
- * Uses crawlDirectory from utils for glob matching (picomatch-based,
- * cross-platform, no additional dependencies).
+ * Each include pattern is resolved against `projectRoot` and may step out of
+ * the package via `..` (e.g. `"../../docs/skills/*\/SKILL.md"` in a monorepo
+ * where SKILL.md files live alongside, not inside, the package). Patterns are
+ * grouped by their effective scan root so `crawlDirectory` is invoked once per
+ * root rather than blindly walking from `projectRoot`.
+ *
+ * User-supplied excludes are matched against paths relative to `projectRoot`
+ * so anchored excludes like `docs/private/**` keep their original meaning
+ * regardless of which scan root produced the candidate file.
  *
  * @param skillsConfig - The skills section from vibe-agent-toolkit.config.yaml
  * @param projectRoot - Absolute path to project root (where config yaml lives)

package/dist/commands/skills/skill-discovery.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"skill-discovery.d.ts","sourceRoot":"","sources":["../../../src/commands/skills/skill-discovery.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAMH,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,+BAA+B,CAAC;AAGlE,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,sBAAsB,CAAC;AAiC5D;;;;;;;;;GASG;AACH,wBAAsB,wBAAwB,CAC5C,YAAY,EAAE,YAAY,EAC1B,WAAW,EAAE,MAAM,GAClB,OAAO,CAAC,eAAe,EAAE,CAAC,CA0B5B"}
+{"version":3,"file":"skill-discovery.d.ts","sourceRoot":"","sources":["../../../src/commands/skills/skill-discovery.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAOH,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,+BAA+B,CAAC;AAIlE,OAAO,KAAK,EAAE,eAAe,EAAE,MAAM,sBAAsB,CAAC;AA2F5D;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAsB,wBAAwB,CAC5C,YAAY,EAAE,YAAY,EAC1B,WAAW,EAAE,MAAM,GAClB,OAAO,CAAC,eAAe,EAAE,CAAC,CA0B5B"}

package/dist/commands/skills/skill-discovery.js

@@ -4,10 +4,12 @@
  * Reads skills.include/exclude glob patterns from vibe-agent-toolkit.config.yaml,
  * finds matching SKILL.md files, and extracts skill names from frontmatter.
  */
+import { existsSync } from 'node:fs';
 import { readFile } from 'node:fs/promises';
 import { basename } from 'node:path';
 import { parseMarkdown } from '@vibe-agent-toolkit/resources';
-import { crawlDirectory } from '@vibe-agent-toolkit/utils';
+import { crawlDirectory, safePath, toForwardSlash } from '@vibe-agent-toolkit/utils';
+import picomatch from 'picomatch';
 /**
  * Directories that should always be excluded from skill discovery for performance.
  */
@@ -37,11 +39,70 @@ async function readSkillName(skillPath) {
     }
     return basename(skillPath, '.md');
 }
+/**
+ * Split an include pattern into its literal base directory and its glob
+ * remainder. `picomatch.scan` already does the heavy lifting for proper
+ * glob patterns; the manual split handles pure-literal paths so a single
+ * SKILL.md file is still crawlable from its parent directory.
+ */
+function splitIncludePattern(pattern) {
+    const scanned = picomatch.scan(pattern);
+    if (scanned.isGlob) {
+        return { base: scanned.base, glob: scanned.glob };
+    }
+    // Literal path (no glob metachars): match the file from its parent.
+    const slash = pattern.lastIndexOf('/');
+    if (slash === -1) {
+        return { base: '', glob: pattern };
+    }
+    return { base: pattern.slice(0, slash), glob: pattern.slice(slash + 1) };
+}
+/**
+ * Group include patterns by their effective scan root. Each pattern's literal
+ * prefix (resolved against `projectRoot`) becomes the absolute scan root for
+ * its glob remainder, which is what lets `..` segments escape `projectRoot`.
+ */
+function groupIncludePatternsByBase(include, projectRoot) {
+    const patternsByBase = new Map();
+    for (const pattern of include) {
+        const { base, glob } = splitIncludePattern(pattern);
+        const absBase = safePath.resolve(projectRoot, base || '.');
+        const effectiveGlob = glob.length > 0 ? glob : '**/*';
+        const existing = patternsByBase.get(absBase) ?? [];
+        existing.push(effectiveGlob);
+        patternsByBase.set(absBase, existing);
+    }
+    return patternsByBase;
+}
+/**
+ * Crawl one effective scan root. Returns absolute paths, or an empty array if
+ * the root does not exist (mirrors audit's filesystem-first tolerance for
+ * patterns pointing at nothing).
+ */
+async function crawlOneBase(base, globs) {
+    // eslint-disable-next-line security/detect-non-literal-fs-filename -- base derived from validated config
+    if (!existsSync(base)) {
+        return [];
+    }
+    return crawlDirectory({
+        baseDir: base,
+        include: globs,
+        exclude: DISCOVERY_EXCLUDE,
+        dot: true,
+    });
+}
 /**
  * Discover skills from config yaml skills section.
  *
- * Uses crawlDirectory from utils for glob matching (picomatch-based,
- * cross-platform, no additional dependencies).
+ * Each include pattern is resolved against `projectRoot` and may step out of
+ * the package via `..` (e.g. `"../../docs/skills/*\/SKILL.md"` in a monorepo
+ * where SKILL.md files live alongside, not inside, the package). Patterns are
+ * grouped by their effective scan root so `crawlDirectory` is invoked once per
+ * root rather than blindly walking from `projectRoot`.
+ *
+ * User-supplied excludes are matched against paths relative to `projectRoot`
+ * so anchored excludes like `docs/private/**` keep their original meaning
+ * regardless of which scan root produced the candidate file.
  *
  * @param skillsConfig - The skills section from vibe-agent-toolkit.config.yaml
  * @param projectRoot - Absolute path to project root (where config yaml lives)
@@ -49,23 +110,27 @@ async function readSkillName(skillPath) {
  */
 export async function discoverSkillsFromConfig(skillsConfig, projectRoot) {
     const { include, exclude } = skillsConfig;
-    // Discover SKILL.md files using crawlDirectory (picomatch globs)
-    const skillPaths = await crawlDirectory({
-        baseDir: projectRoot,
-        include,
-        exclude: [
-            ...DISCOVERY_EXCLUDE,
-            ...(exclude ?? []),
-        ],
-        dot: true, // Match through dot-directories (e.g., .claude/worktrees/)
-    });
+    const patternsByBase = groupIncludePatternsByBase(include, projectRoot);
+    const userExcludeMatcher = exclude && exclude.length > 0
+        ? picomatch(exclude, { dot: true })
+        : null;
+    const foundAbsPaths = new Set();
+    for (const [base, globs] of patternsByBase) {
+        const crawled = await crawlOneBase(base, globs);
+        for (const absPath of crawled) {
+            if (userExcludeMatcher) {
+                const relFromProject = toForwardSlash(safePath.relative(projectRoot, absPath));
+                if (userExcludeMatcher(relFromProject))
+                    continue;
+            }
+            foundAbsPaths.add(safePath.resolve(absPath));
+        }
+    }
     const discovered = [];
-    for (const skillPath of skillPaths) {
+    for (const skillPath of foundAbsPaths) {
         const name = await readSkillName(skillPath);
-        if (!name) {
-            continue;
-        }
-        discovered.push({ name, sourcePath: skillPath });
+        if (name)
+            discovered.push({ name, sourcePath: skillPath });
     }
     return discovered;
 }

package/dist/commands/skills/skill-discovery.js.map

@@ -1 +1 @@
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package/dist/utils/verdict-helpers.d.ts

@@ -12,7 +12,8 @@
  * nor in marketplace (which knows nothing about config-level packaging
  * options).
  */
-import { type Observation, type PackagingValidationResult, type ValidationIssue } from '@vibe-agent-toolkit/agent-skills';
+import { type ValidationIssue } from '@vibe-agent-toolkit/agent-schema';
+import { type Observation, type PackagingValidationResult } from '@vibe-agent-toolkit/agent-skills';
 import { type Target, type Verdict } from '@vibe-agent-toolkit/claude-marketplace';
 /**
  * Convert a verdict into a ValidationIssue using CODE_REGISTRY for severity,