@vertesia/workflow 0.78.0-dev-28b447d → 0.78.0-dev.1

package/lib/esm/activities/extractDocumentText.js

@@ -0,0 +1,153 @@
+import { log } from "@temporalio/activity";
+import { markdownWithMarkitdown } from "../conversion/markitdown.js";
+import { mutoolPdfToText } from "../conversion/mutool.js";
+import { markdownWithPandoc } from "../conversion/pandoc.js";
+import { setupActivity } from "../dsl/setup/ActivityContext.js";
+import { DocumentNotFoundError } from "../errors.js";
+import { TextExtractionStatus } from "../result-types.js";
+import { fetchBlobAsBuffer, md5 } from "../utils/blobs.js";
+import { countTokens } from "../utils/tokens.js";
+//@ts-ignore
+const JSON = {
+    name: "extractDocumentText",
+};
+export async function extractDocumentText(payload) {
+    const { client, objectId } = await setupActivity(payload);
+    const r = await client.objects.find({
+        query: { _id: objectId },
+        limit: 1,
+        select: "+text",
+    });
+    const doc = r[0];
+    if (!doc) {
+        log.error(`Document ${objectId} not found`);
+        throw new DocumentNotFoundError(`Document ${objectId} not found`, payload.objectIds);
+    }
+    log.info(`Extracting text for object ${doc.id}`);
+    if (!doc.content?.type || !doc.content?.source) {
+        if (doc.text) {
+            return createResponse(doc, doc.text, TextExtractionStatus.skipped, "Text present and no source or type");
+        }
+        else {
+            return createResponse(doc, "", TextExtractionStatus.error, "No source or type found");
+        }
+    }
+    //skip if text already extracted and proper etag
+    if (doc.text && doc.text.length > 0 && doc.text_etag === doc.content.etag) {
+        return createResponse(doc, doc.text, TextExtractionStatus.skipped, "Text already extracted");
+    }
+    let fileBuffer;
+    try {
+        fileBuffer = await fetchBlobAsBuffer(client, doc.content.source);
+    }
+    catch (e) {
+        log.error(`Error reading file: ${e}`);
+        return createResponse(doc, "", TextExtractionStatus.error, e.message);
+    }
+    let txt;
+    switch (doc.content.type) {
+        case "application/pdf":
+            txt = await mutoolPdfToText(fileBuffer);
+            break;
+        case "text/plain":
+            txt = fileBuffer.toString("utf8");
+            break;
+        //docx
+        case "application/vnd.openxmlformats-officedocument.wordprocessingml.document":
+            txt = await markdownWithMarkitdown(fileBuffer, "docx");
+            break;
+        //pptx
+        case "application/vnd.openxmlformats-officedocument.presentationml.presentation":
+            txt = await markdownWithMarkitdown(fileBuffer, "pptx");
+            break;
+        //html
+        case "text/html":
+            txt = await markdownWithPandoc(fileBuffer, "html");
+            break;
+        //opendocument
+        case "application/vnd.oasis.opendocument.text":
+            txt = await markdownWithPandoc(fileBuffer, "odt");
+            break;
+        //rtf
+        case "application/rtf":
+            txt = await markdownWithPandoc(fileBuffer, "rtf");
+            break;
+        //markdown
+        case "text/markdown":
+            txt = fileBuffer.toString("utf8");
+            break;
+        //csv
+        case "text/csv":
+            txt = fileBuffer.toString("utf8");
+            break;
+        //typescript
+        case "application/typescript":
+            txt = fileBuffer.toString("utf8");
+            break;
+        //javascript
+        case "application/javascript":
+            txt = fileBuffer.toString("utf8");
+            break;
+        //json
+        case "application/json":
+            txt = fileBuffer.toString("utf8");
+            break;
+        default:
+            if (sniffIfText(fileBuffer)) {
+                txt = fileBuffer.toString("utf8"); //TODO: add charset detection
+                break;
+            }
+            return createResponse(doc, doc.text ?? "", TextExtractionStatus.skipped, `Unsupported mime type: ${doc.content.type}`);
+    }
+    const tokensData = countTokens(txt);
+    const etag = doc.content.etag ?? md5(txt);
+    const updateData = {
+        text: txt,
+        text_etag: etag,
+        tokens: {
+            ...tokensData,
+            etag: etag,
+        },
+    };
+    await client.objects.update(doc.id, updateData);
+    return createResponse(doc, txt, TextExtractionStatus.success);
+}
+function createResponse(doc, text, status, message) {
+    return {
+        status,
+        message,
+        tokens: doc.tokens,
+        len: text.length,
+        objectId: doc.id,
+        hasText: !!text,
+    };
+}
+function sniffIfText(buf) {
+    // If file is too large, don't even try
+    if (buf.length > 500 * 1024) {
+        return false;
+    }
+    // Count binary/control characters
+    let binaryCount = 0;
+    const sampleSize = Math.min(buf.length, 1000); // Check first 1000 bytes
+    for (let i = 0; i < sampleSize; i++) {
+        // Count control characters (except common whitespace)
+        const byte = buf[i];
+        if ((byte < 32 && ![9, 10, 13].includes(byte)) || byte === 0) {
+            binaryCount++;
+        }
+    }
+    // If more than 10% binary/control chars, probably not text
+    if (binaryCount / sampleSize > 0.1) {
+        return false;
+    }
+    // Additional check for valid UTF-8 encoding
+    try {
+        const s = buf.toString("utf8");
+        return s.length > 0 && !s.includes("\uFFFD"); // Replacement character
+    }
+    catch (e) {
+        return false;
+    }
+}
+//# sourceMappingURL=extractDocumentText.js.map

package/lib/esm/activities/extractDocumentText.js.map

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package/lib/esm/activities/generateDocumentProperties.js

@@ -0,0 +1,81 @@
+import { log } from "@temporalio/activity";
+import { setupActivity } from "../dsl/setup/ActivityContext.js";
+import { truncByMaxTokens } from "../utils/tokens.js";
+import { executeInteractionFromActivity } from "./executeInteraction.js";
+import { parseCompletionResultsToJson } from "@llumiverse/common";
+const INT_EXTRACT_INFORMATION = "sys:ExtractInformation";
+export async function generateDocumentProperties(payload) {
+    const context = await setupActivity(payload);
+    const { params, client, objectId } = context;
+    const interactionName = params.interactionName ?? INT_EXTRACT_INFORMATION;
+    const project = await context.fetchProject();
+    const doc = await client.objects.retrieve(objectId, "+text");
+    const type = doc.type ? await client.types.retrieve(doc.type.id) : undefined;
+    if (!doc?.text && !params.use_vision && !doc?.content?.type?.startsWith("image/")) {
+        log.warn(`Object ${objectId} not found or text is empty`);
+        return { status: "failed", error: "no-text" };
+    }
+    if (!type || !type.object_schema) {
+        log.info(`Object ${objectId} has no schema`);
+        return { document: objectId, status: "skipped", message: "no schema defined on type" };
+    }
+    const getImageRef = () => {
+        if (doc.content?.type?.startsWith("image/")) {
+            return "store:" + doc.id;
+        }
+        if (params.use_vision && doc.content?.type?.startsWith("application/pdf")) {
+            return "store:" + doc.id;
+        }
+        log.info(`Object ${objectId} is not an image or pdf`);
+        return undefined;
+    };
+    const content = doc.text
+        ? truncByMaxTokens(doc.text, params.truncate || 30000)
+        : undefined;
+    const promptData = {
+        content: content,
+        image: getImageRef() ?? undefined,
+        human_context: project?.configuration?.human_context ?? undefined,
+    };
+    log.info(` Extracting information from object ${objectId} with type ${type.name}`, payload.debug_mode ? { params } : undefined);
+    const infoRes = await executeInteractionFromActivity(client, interactionName, {
+        ...params,
+        include_previous_error: true,
+        result_schema: type.object_schema,
+        validate_result: type.strict_mode,
+    }, promptData, payload.debug_mode ?? false);
+    const getText = () => {
+        if (doc.text) {
+            return undefined;
+        }
+        let text = "";
+        const jsonResult = parseCompletionResultsToJson(infoRes.result);
+        if (jsonResult.title) {
+            text += jsonResult.title + "\n";
+        }
+        if (jsonResult.description) {
+            text += jsonResult.description;
+        }
+        if (text) {
+            return text;
+        }
+        else {
+            return undefined;
+        }
+    };
+    log.info(`Extracted information from object ${objectId} with type ${type.name}`, { runId: infoRes.id });
+    await client.objects.update(doc.id, {
+        properties: {
+            ...parseCompletionResultsToJson(infoRes.result),
+            etag: doc.text_etag,
+        },
+        text: getText(),
+        generation_run_info: {
+            id: infoRes.id,
+            date: new Date().toISOString(),
+            model: infoRes.modelId,
+        },
+    });
+    return { status: "completed" };
+}
+//# sourceMappingURL=generateDocumentProperties.js.map

package/lib/esm/activities/generateDocumentProperties.js.map

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package/lib/esm/activities/generateEmbeddings.js

@@ -0,0 +1,355 @@
+import { log } from "@temporalio/activity";
+import { ImageRenditionFormat, SupportedEmbeddingTypes, } from "@vertesia/common";
+import { setupActivity } from "../dsl/setup/ActivityContext.js";
+import { DocumentNotFoundError } from "../errors.js";
+import { fetchBlobAsBase64, md5 } from "../utils/blobs.js";
+import { getContentParts } from "../utils/chunks.js";
+import { countTokens } from "../utils/tokens.js";
+export async function generateEmbeddings(payload) {
+    const { params, client, objectId, fetchProject } = await setupActivity(payload);
+    const { force, type } = params;
+    const projectData = await fetchProject();
+    const config = projectData?.configuration.embeddings[type];
+    if (!projectData) {
+        throw new DocumentNotFoundError("Project not found", [payload.project_id]);
+    }
+    if (!config) {
+        throw new DocumentNotFoundError("Embeddings configuration not found", [
+            objectId,
+        ]);
+    }
+    if (!projectData) {
+        throw new DocumentNotFoundError("Project not found", [payload.project_id]);
+    }
+    if (!projectData?.configuration.embeddings[type]?.enabled) {
+        log.info(`Embeddings generation disabled for type ${type} on project: ${projectData.name} (${projectData.namespace})`, { config });
+        return {
+            id: objectId,
+            status: "skipped",
+            message: `Embeddings generation disabled for type ${type}`,
+        };
+    }
+    log.info(`${type} embedding generation starting for object ${objectId}`, {
+        force,
+        config,
+    });
+    if (!config.environment) {
+        throw new Error("No environment found in project configuration. Set environment in project configuration to generate embeddings.");
+    }
+    const document = await client.objects.retrieve(objectId, "+text +parts +embeddings +tokens +properties");
+    if (!document) {
+        throw new DocumentNotFoundError("Document not found", [objectId]);
+    }
+    if (!document.content) {
+        throw new DocumentNotFoundError("Document content not found", [objectId]);
+    }
+    let res;
+    switch (type) {
+        case SupportedEmbeddingTypes.text:
+            res = await generateTextEmbeddings({
+                client,
+                config,
+                document,
+                type,
+            });
+            break;
+        case SupportedEmbeddingTypes.properties:
+            res = await generateTextEmbeddings({
+                client,
+                config,
+                document,
+                type,
+            });
+            break;
+        case SupportedEmbeddingTypes.image:
+            res = await generateImageEmbeddings({
+                client,
+                config,
+                document,
+                type,
+            });
+            break;
+        default:
+            res = {
+                id: objectId,
+                status: "failed",
+                message: `unsupported embedding type: ${type}`,
+            };
+    }
+    return res;
+}
+async function generateTextEmbeddings({ document, client, type, config }, parts) {
+    if (!document) {
+        return { status: "error", message: "document is null or undefined" };
+    }
+    if (type !== SupportedEmbeddingTypes.text &&
+        type !== SupportedEmbeddingTypes.properties) {
+        return {
+            id: document.id,
+            status: "failed",
+            message: `unsupported embedding type: ${type}`,
+        };
+    }
+    if (type === SupportedEmbeddingTypes.text && !document.text) {
+        return { id: document.id, status: "failed", message: "no text found" };
+    }
+    if (type === SupportedEmbeddingTypes.properties && !document?.properties) {
+        return {
+            id: document.id,
+            status: "failed",
+            message: "no properties found",
+        };
+    }
+    const { environment, model } = config;
+    const partDefinitions = parts ?? [];
+    // Count tokens if not already done
+    if (!document.tokens?.count && type === SupportedEmbeddingTypes.text) {
+        log.debug("Updating token count for document: " + document.id);
+        const tokensData = countTokens(document.text);
+        await client.objects.update(document.id, {
+            tokens: {
+                ...tokensData,
+                etag: document.text_etag ?? md5(document.text),
+            },
+        });
+        document.tokens = {
+            ...tokensData,
+            etag: document.text_etag ?? md5(document.text),
+        };
+    }
+    const maxTokens = config.max_tokens ?? 8000;
+    //generate embeddings for the main doc if document isn't too large
+    //if too large, we'll just generate embeddings for the parts
+    //then we can generate embeddings for the main document by averaging the tensors
+    log.info(`Generating ${type} embeddings for document ${document.id}`);
+    if (type === SupportedEmbeddingTypes.text &&
+        document.tokens?.count &&
+        document.tokens?.count > maxTokens) {
+        log.info("Document too large, generating embeddings for parts");
+        if (!document.text) {
+            return {
+                id: document.id,
+                status: "failed",
+                message: "no text found",
+            };
+        }
+        if (!partDefinitions || partDefinitions.length === 0) {
+            log.info("No parts found for document, skipping embeddings generation");
+            return {
+                id: document.id,
+                status: "failed",
+                message: "no parts found",
+            };
+        }
+        log.info("Generating embeddings for parts", {
+            parts: partDefinitions,
+            max_tokens: maxTokens,
+        });
+        const docParts = getContentParts(document.text, partDefinitions);
+        log.info(`Retrieved ${docParts.length} parts`);
+        const start = new Date().getTime();
+        const generatePartEmbeddings = async (partContent, i) => {
+            const localStart = new Date().getTime();
+            try {
+                log.info(`Generating embeddings for part ${i}`, {
+                    text_len: partContent.length,
+                });
+                if (!partContent) {
+                    return {
+                        id: i,
+                        number: i,
+                        result: null,
+                        status: "skipped",
+                        message: "no text found",
+                    };
+                }
+                const e = await generateEmbeddingsFromStudio(partContent, environment, client, model).catch((e) => {
+                    log.error("Error generating embeddings for part " + i, {
+                        text_length: partContent.length,
+                        error: e,
+                    });
+                    return null;
+                });
+                if (!e || !e.values) {
+                    return {
+                        id: i,
+                        number: i,
+                        result: null,
+                        message: "no embeddings generated",
+                    };
+                }
+                if (e.values.length === 0) {
+                    return {
+                        id: i,
+                        number: i,
+                        result: null,
+                        message: "no embeddings generated",
+                    };
+                }
+                log.info(`Generated embeddings for part ${i}`, {
+                    len: e.values.length,
+                    duration: new Date().getTime() - localStart,
+                });
+                return { number: i, result: e };
+            }
+            catch (err) {
+                log.info(`Error generating ${type} embeddings for part ${i} of ${document.id}`, { error: err });
+                return {
+                    number: i,
+                    result: null,
+                    message: "error generating embeddings",
+                    error: err.message,
+                };
+            }
+        };
+        const partEmbeddings = await Promise.all(docParts.map((part, i) => generatePartEmbeddings(part, i)));
+        const validPartEmbeddings = partEmbeddings
+            .filter((e) => e.result !== null)
+            .map((e) => e.result);
+        const averagedEmbedding = computeAttentionEmbedding(validPartEmbeddings.map((e) => e.values));
+        log.info(`Averaged embeddings for document ${document.id} in ${(new Date().getTime() - start) / 1000} seconds`, {
+            len: averagedEmbedding.length,
+            count: validPartEmbeddings.length,
+            max_tokens: maxTokens,
+        });
+        await client.objects.setEmbedding(document.id, type, {
+            values: averagedEmbedding,
+            model: validPartEmbeddings[0].model,
+            etag: document.text_etag,
+        });
+        log.info(`Object ${document.id} embedding set`, {
+            type,
+            len: averagedEmbedding.length,
+        });
+    }
+    else {
+        log.info(`Generating ${type} embeddings for document`);
+        const res = await generateEmbeddingsFromStudio(JSON.stringify(document[type]), environment, client);
+        if (!res || !res.values) {
+            return {
+                id: document.id,
+                status: "failed",
+                message: "no embeddings generated",
+            };
+        }
+        log.info(`${type} embeddings generated for document ${document.id}`, {
+            len: res.values.length,
+        });
+        await client.objects.setEmbedding(document.id, type, {
+            values: res.values,
+            model: res.model,
+            etag: document.text_etag,
+        });
+        return {
+            id: document.id,
+            type,
+            status: "completed",
+            len: res.values.length,
+        };
+    }
+}
+async function generateImageEmbeddings({ document, client, type, config, }) {
+    log.info("Generating image embeddings for document " + document.id, {
+        content: document.content,
+    });
+    if (!document.content?.type?.startsWith("image/") &&
+        !document.content?.type?.includes("pdf")) {
+        return {
+            id: document.id,
+            type,
+            status: "failed",
+            message: "content is not an image",
+        };
+    }
+    const { environment, model } = config;
+    const resRnd = await client.store.objects.getRendition(document.id, {
+        format: ImageRenditionFormat.jpeg,
+        generate_if_missing: true,
+        sign_url: true,
+    });
+    if (resRnd.status === "generating") {
+        throw new Error("Rendition is generating, will retry later");
+    }
+    else if (resRnd.status === "failed" ||
+        !resRnd.renditions ||
+        !resRnd.renditions.length) {
+        throw new DocumentNotFoundError("Rendition retrieval failed", [document.id]);
+    }
+    const renditions = resRnd.renditions;
+    if (!renditions?.length) {
+        throw new DocumentNotFoundError("No source found in rendition", [
+            document.id,
+        ]);
+    }
+    const rendition = renditions[0];
+    const image = await fetchBlobAsBase64(client, rendition);
+    const res = await client.environments
+        .embeddings(environment, {
+        image,
+        model,
+    })
+        .then((res) => res)
+        .catch((e) => {
+        log.error("Error generating embeddings for image", { error: e });
+        throw e;
+    });
+    if (!res || !res.values) {
+        return {
+            id: document.id,
+            status: "failed",
+            message: "no embeddings generated",
+        };
+    }
+    await client.objects.setEmbedding(document.id, SupportedEmbeddingTypes.image, {
+        values: res.values,
+        model: res.model,
+        etag: document.text_etag,
+    });
+    return {
+        id: document.id,
+        type,
+        status: "completed",
+        len: res.values.length,
+    };
+}
+async function generateEmbeddingsFromStudio(text, env, client, model) {
+    log.info(`Generating embeddings for text of ${text.length} chars with environment ${env}`);
+    return client.environments
+        .embeddings(env, {
+        text,
+        model,
+    })
+        .then((res) => res)
+        .catch((e) => {
+        log.error("Error generating embeddings for text", { error: e });
+        throw e;
+    });
+}
+//Simplified attention mechanism
+// This is a naive implementation and should be replaced with a more sophisticated
+// using tensorflow in a specific package
+function computeAttentionEmbedding(chunkEmbeddings) {
+    if (chunkEmbeddings.length === 0)
+        return [];
+    const start = new Date().getTime();
+    // Generate random attention weights
+    const attentionWeights = chunkEmbeddings.map(() => Math.random());
+    // Apply softmax to get attention scores
+    const expWeights = attentionWeights.map((w) => Math.exp(w));
+    const sumExpWeights = expWeights.reduce((sum, val) => sum + val, 0);
+    const attentionScores = expWeights.map((w) => w / sumExpWeights);
+    // Get embedding dimension
+    const embeddingDim = chunkEmbeddings[0].length;
+    // Initialize document embedding
+    const documentEmbedding = new Array(embeddingDim).fill(0);
+    // Weighted sum of embeddings
+    for (let i = 0; i < chunkEmbeddings.length; i++) {
+        for (let j = 0; j < embeddingDim; j++) {
+            documentEmbedding[j] += chunkEmbeddings[i][j] * attentionScores[i];
+        }
+    }
+    const duration = new Date().getTime() - start;
+    console.log(`Computed document embedding in ${duration}ms for ${chunkEmbeddings.length} chunks`);
+    return documentEmbedding;
+}
+//# sourceMappingURL=generateEmbeddings.js.map

package/lib/esm/activities/generateEmbeddings.js.map

@@ -0,0 +1 @@
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