@varveai/adit-cloud 0.3.3 → 0.3.4

package/dist/project-link/cache.js

@@ -71,6 +71,14 @@ export function updateCachedDocHashes(db, projectId, serverUrl, hashes) {
     WHERE project_id = ? AND server_url = ?
   `).run(JSON.stringify(hashes), new Date().toISOString(), new Date().toISOString(), projectId, serverUrl);
 }
+/** Update cached metadata JSON without marking documents as synced. */
+export function updateCachedMetadata(db, projectId, serverUrl, hashes) {
+    db.prepare(`
+    UPDATE project_link_cache
+    SET doc_hashes_json = ?, updated_at = ?
+    WHERE project_id = ? AND server_url = ?
+  `).run(JSON.stringify(hashes), new Date().toISOString(), projectId, serverUrl);
+}
 /** Mark as qualified or not */
 export function updateCachedQualified(db, projectId, serverUrl, qualified) {
     db.prepare(`

package/dist/project-link/cache.js.map

@@ -1 +1 @@
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+{"version":3,"file":"cache.js","sourceRoot":"","sources":["../../src/project-link/cache.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAmBH,0CAA0C;AAC1C,MAAM,UAAU,mBAAmB,CACjC,EAAqB,EACrB,SAAiB,EACjB,SAAiB;IAEjB,MAAM,GAAG,GAAG,EAAE;SACX,OAAO,CAAC,0EAA0E,CAAC;SACnF,GAAG,CAAC,SAAS,EAAE,SAAS,CAAyB,CAAC;IAErD,IAAI,CAAC,GAAG;QAAE,OAAO,IAAI,CAAC;IAEtB,IAAI,SAAS,GAA2B,EAAE,CAAC;IAC3C,IAAI,CAAC;QACH,SAAS,GAAG,IAAI,CAAC,KAAK,CAAC,GAAG,CAAC,eAAe,CAA2B,CAAC;IACxE,CAAC;IAAC,MAAM,CAAC;QACP,kEAAkE;IACpE,CAAC;IAED,OAAO;QACL,SAAS,EAAE,GAAG,CAAC,UAAU;QACzB,SAAS,EAAE,GAAG,CAAC,UAAU;QACzB,kBAAkB,EAAE,GAAG,CAAC,oBAAoB;QAC5C,aAAa,EAAE,GAAG,CAAC,eAAe;QAClC,gBAAgB,EAAE,GAAG,CAAC,mBAAmB;QACzC,aAAa,EAAE,GAAG,CAAC,gBAAgB;QACnC,SAAS;QACT,SAAS,EAAE,GAAG,CAAC,SAAS,KAAK,CAAC;QAC9B,aAAa,EAAE,GAAG,CAAC,cAAc;QACjC,SAAS,EAAE,GAAG,CAAC,UAAU;KAC1B,CAAC;AACJ,CAAC;AAED,0CAA0C;AAC1C,MAAM,UAAU,sBAAsB,CACpC,EAAqB,EACrB,KAAuB;IAEvB,EAAE,CAAC,OAAO,CAAC;;;;;;;;;;;;;;GAcV,CAAC,CAAC,GAAG,CACJ,KAAK,CAAC,SAAS,EACf,KAAK,CAAC,SAAS,EACf,KAAK,CAAC,kBAAkB,EACxB,KAAK,CAAC,aAAa,EACnB,KAAK,CAAC,gBAAgB,EACtB,KAAK,CAAC,aAAa,EACnB,IAAI,CAAC,SAAS,CAAC,KAAK,CAAC,SAAS,CAAC,EAC/B,KAAK,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EACvB,KAAK,CAAC,aAAa,EACnB,KAAK,CAAC,SAAS,CAChB,CAAC;AACJ,CAAC;AAED,uDAAuD;AACvD,MAAM,UAAU,qBAAqB,CACnC,EAAqB,EACrB,SAAiB,EACjB,SAAiB;IAEjB,EAAE,CAAC,OAAO,CAAC,wEAAwE,CAAC;SACjF,GAAG,CAAC,SAAS,EAAE,SAAS,CAAC,CAAC;AAC/B,CAAC;AAED,qDAAqD;AACrD,MAAM,UAAU,qBAAqB,CACnC,EAAqB,EACrB,SAAiB,EACjB,SAAiB,EACjB,GAAW;IAEX,EAAE,CAAC,OAAO,CAAC;;;;GAIV,CAAC,CAAC,GAAG,CAAC,GAAG,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,EAAE,SAAS,EAAE,SAAS,CAAC,CAAC;AAC9D,CAAC;AAED,iDAAiD;AACjD,MAAM,UAAU,qBAAqB,CACnC,EAAqB,EACrB,SAAiB,EACjB,SAAiB,EACjB,MAA8B;IAE9B,EAAE,CAAC,OAAO,CAAC;;;;GAIV,CAAC,CAAC,GAAG,CACJ,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC,EACtB,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,EACxB,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,EACxB,SAAS,EACT,SAAS,CACV,CAAC;AACJ,CAAC;AAED,uEAAuE;AACvE,MAAM,UAAU,oBAAoB,CAClC,EAAqB,EACrB,SAAiB,EACjB,SAAiB,EACjB,MAA8B;IAE9B,EAAE,CAAC,OAAO,CAAC;;;;GAIV,CAAC,CAAC,GAAG,CACJ,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC,EACtB,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,EACxB,SAAS,EACT,SAAS,CACV,CAAC;AACJ,CAAC;AAED,+BAA+B;AAC/B,MAAM,UAAU,qBAAqB,CACnC,EAAqB,EACrB,SAAiB,EACjB,SAAiB,EACjB,SAAkB;IAElB,EAAE,CAAC,OAAO,CAAC;;;;GAIV,CAAC,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,EAAE,SAAS,EAAE,SAAS,CAAC,CAAC;AAC5E,CAAC"}

package/dist/project-link/git-collector.d.ts

@@ -40,13 +40,16 @@ export interface CollectCommitOptions {
     sinceCommitSha?: string | null;
     /** Branch name to tag on each returned commit (legacy — prefer resolveCommitBranches). */
     branch?: string | null;
+    /** Collect commits reachable from every local/remote ref instead of only HEAD. */
+    allRefs?: boolean;
 }
 /**
  * Collect commit logs, optionally since a specific commit SHA.
  *
  * When `sinceCommitSha` is provided, only commits after that SHA
  * are returned (incremental sync). Otherwise, all commits are returned.
- * Commits are ordered newest-first (git log default).
+ * Commits are ordered newest-first (git log default). When `allRefs`
+ * is true, commits are collected from every local/remote ref.
  *
  * When `branch` is provided, each returned commit will have its
  * `branch` field set to that value. For accurate per-commit branch
@@ -61,11 +64,10 @@ export declare function collectCommitLogs(cwd: string, sinceCommitShaOrOptions?:
 /**
  * Resolve per-commit branch assignments for a set of commits.
  *
- * For each known branch, runs `git log <branch> --format=%H` to collect
- * the SHAs reachable from that branch. Commits are assigned to the most
- * specific branch (non-default branches take priority over the default
- * branch, so a commit on `feature/x` that was later merged into `main`
- * is attributed to `feature/x`).
+ * For each known branch, runs `git rev-list <branch>` to collect the SHAs
+ * reachable from that branch, newest first. Commits are assigned to the
+ * nearest branch head that contains them, so a branch-tip commit stays on
+ * that branch even if another branch was created from it later.
  *
  * Only SHAs present in `commitShas` are assigned — this avoids building
  * a map for the entire repository history when doing incremental sync.
@@ -74,7 +76,7 @@ export declare function collectCommitLogs(cwd: string, sinceCommitShaOrOptions?:
  * also returns the same array for chaining convenience.
  */
 export declare function resolveCommitBranches(cwd: string, commits: GitCommit[], branches: GitBranch[], defaultBranch: string | null): Promise<GitCommit[]>;
-/** Count total commits reachable from HEAD. */
+/** Count total commits reachable from all local/remote refs. */
 export declare function collectCommitCount(cwd: string): Promise<number>;
 /**
  * Extract a project name from a git remote URL.

package/dist/project-link/git-collector.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"git-collector.d.ts","sourceRoot":"","sources":["../../src/project-link/git-collector.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAGH,OAAO,KAAK,EAAE,SAAS,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AAEvD,wEAAwE;AACxE,wBAAsB,gBAAgB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAMnE;AAED;;;;;;GAMG;AACH,wBAAsB,oBAAoB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,GAAG,IAAI,CAAC,CAmB9E;AAED;;;;;;GAMG;AACH,wBAAsB,oBAAoB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,GAAG,IAAI,CAAC,CAM9E;AAED;;;;;GAKG;AACH,wBAAsB,eAAe,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,SAAS,EAAE,CAAC,CAiCvE;AAoBD;;GAEG;AACH,MAAM,WAAW,oBAAoB;IACnC,6DAA6D;IAC7D,cAAc,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IAC/B,0FAA0F;IAC1F,MAAM,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;CACxB;AAED;;;;;;;;;;;;;;;GAeG;AACH,wBAAsB,iBAAiB,CACrC,GAAG,EAAE,MAAM,EACX,uBAAuB,CAAC,EAAE,MAAM,GAAG,IAAI,GAAG,oBAAoB,GAC7D,OAAO,CAAC,SAAS,EAAE,CAAC,CA6DtB;AAED;;;;;;;;;;;;;;GAcG;AACH,wBAAsB,qBAAqB,CACzC,GAAG,EAAE,MAAM,EACX,OAAO,EAAE,SAAS,EAAE,EACpB,QAAQ,EAAE,SAAS,EAAE,EACrB,aAAa,EAAE,MAAM,GAAG,IAAI,GAC3B,OAAO,CAAC,SAAS,EAAE,CAAC,CA6CtB;AAED,+CAA+C;AAC/C,wBAAsB,kBAAkB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAIrE;AAED;;;;;;;GAOG;AACH,wBAAgB,wBAAwB,CAAC,GAAG,EAAE,MAAM,GAAG,MAAM,CAmB5D"}
+{"version":3,"file":"git-collector.d.ts","sourceRoot":"","sources":["../../src/project-link/git-collector.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAGH,OAAO,KAAK,EAAE,SAAS,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AAEvD,wEAAwE;AACxE,wBAAsB,gBAAgB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAMnE;AAED;;;;;;GAMG;AACH,wBAAsB,oBAAoB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,GAAG,IAAI,CAAC,CAmB9E;AAED;;;;;;GAMG;AACH,wBAAsB,oBAAoB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,GAAG,IAAI,CAAC,CAM9E;AAED;;;;;GAKG;AACH,wBAAsB,eAAe,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,SAAS,EAAE,CAAC,CAiCvE;AAoBD;;GAEG;AACH,MAAM,WAAW,oBAAoB;IACnC,6DAA6D;IAC7D,cAAc,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IAC/B,0FAA0F;IAC1F,MAAM,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,kFAAkF;IAClF,OAAO,CAAC,EAAE,OAAO,CAAC;CACnB;AAED;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAsB,iBAAiB,CACrC,GAAG,EAAE,MAAM,EACX,uBAAuB,CAAC,EAAE,MAAM,GAAG,IAAI,GAAG,oBAAoB,GAC7D,OAAO,CAAC,SAAS,EAAE,CAAC,CAmEtB;AAED;;;;;;;;;;;;;GAaG;AACH,wBAAsB,qBAAqB,CACzC,GAAG,EAAE,MAAM,EACX,OAAO,EAAE,SAAS,EAAE,EACpB,QAAQ,EAAE,SAAS,EAAE,EACrB,aAAa,EAAE,MAAM,GAAG,IAAI,GAC3B,OAAO,CAAC,SAAS,EAAE,CAAC,CA4EtB;AAED,gEAAgE;AAChE,wBAAsB,kBAAkB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAIrE;AAED;;;;;;;GAOG;AACH,wBAAgB,wBAAwB,CAAC,GAAG,EAAE,MAAM,GAAG,MAAM,CAmB5D"}

package/dist/project-link/git-collector.js

@@ -58,7 +58,7 @@ export async function collectCurrentBranch(cwd) {
  * name matches a remote tracking branch, the local version is kept.
  */
 export async function collectBranches(cwd) {
-    const result = await runGit(["branch", "-a", "--format=%(refname)|%(refname:short)|%(objectname:short)"], { cwd });
+    const result = await runGit(["branch", "-a", "--format=%(refname)|%(refname:short)|%(objectname)"], { cwd });
     if (result.exitCode !== 0)
         return [];
     const defaultBranch = await collectDefaultBranch(cwd);
@@ -108,7 +108,8 @@ function normalizeBranchRef(fullRef, shortRef) {
  *
  * When `sinceCommitSha` is provided, only commits after that SHA
  * are returned (incremental sync). Otherwise, all commits are returned.
- * Commits are ordered newest-first (git log default).
+ * Commits are ordered newest-first (git log default). When `allRefs`
+ * is true, commits are collected from every local/remote ref.
  *
  * When `branch` is provided, each returned commit will have its
  * `branch` field set to that value. For accurate per-commit branch
@@ -122,14 +123,16 @@ function normalizeBranchRef(fullRef, shortRef) {
 export async function collectCommitLogs(cwd, sinceCommitShaOrOptions) {
     // Support both the old positional signature and the new options object.
     // Old: collectCommitLogs(cwd, sinceCommitSha)
-    // New: collectCommitLogs(cwd, { sinceCommitSha, branch })
+    // New: collectCommitLogs(cwd, { sinceCommitSha, branch, allRefs })
     let sinceCommitSha;
     let branch;
+    let allRefs = false;
     if (sinceCommitShaOrOptions !== null &&
         sinceCommitShaOrOptions !== undefined &&
         typeof sinceCommitShaOrOptions === "object") {
         sinceCommitSha = sinceCommitShaOrOptions.sinceCommitSha;
         branch = sinceCommitShaOrOptions.branch;
+        allRefs = sinceCommitShaOrOptions.allRefs === true;
     }
     else {
         sinceCommitSha = sinceCommitShaOrOptions;
@@ -141,11 +144,14 @@ export async function collectCommitLogs(cwd, sinceCommitShaOrOptions) {
     // %B  = subject + body (may contain newlines)
     // %x01 = SOH field delimiter, %x00 = NUL record delimiter
     const args = ["log", "--format=%H%x01%an%x01%ae%x01%aI%x01%B%x00"];
+    if (allRefs) {
+        args.push("--all");
+    }
     if (sinceCommitSha) {
         // Verify the SHA still exists (could have been force-pushed away)
         const exists = await runGit(["cat-file", "-t", sinceCommitSha], { cwd });
         if (exists.exitCode === 0) {
-            args.push(`${sinceCommitSha}..HEAD`);
+            args.push(allRefs ? `^${sinceCommitSha}` : `${sinceCommitSha}..HEAD`);
         }
         // If SHA doesn't exist, fall through to full log
     }
@@ -178,11 +184,10 @@ export async function collectCommitLogs(cwd, sinceCommitShaOrOptions) {
 /**
  * Resolve per-commit branch assignments for a set of commits.
  *
- * For each known branch, runs `git log <branch> --format=%H` to collect
- * the SHAs reachable from that branch. Commits are assigned to the most
- * specific branch (non-default branches take priority over the default
- * branch, so a commit on `feature/x` that was later merged into `main`
- * is attributed to `feature/x`).
+ * For each known branch, runs `git rev-list <branch>` to collect the SHAs
+ * reachable from that branch, newest first. Commits are assigned to the
+ * nearest branch head that contains them, so a branch-tip commit stays on
+ * that branch even if another branch was created from it later.
  *
  * Only SHAs present in `commitShas` are assigned — this avoids building
  * a map for the entire repository history when doing incremental sync.
@@ -195,42 +200,59 @@ export async function resolveCommitBranches(cwd, commits, branches, defaultBranc
         return commits;
     // Build a set of SHAs we care about for fast lookup
     const targetShas = new Set(commits.map((c) => c.sha));
-    // Map from SHA → branch name. Non-default branches are processed first
-    // so their assignments take priority (a commit reachable from both
-    // `feature/x` and `main` should be attributed to `feature/x`).
-    const shaToBranch = new Map();
-    // Sort branches: default branch last so non-default branches win
+    const shaToCandidate = new Map();
+    function isBetterCandidate(candidate, existing) {
+        if (!existing)
+            return true;
+        if (candidate.rank !== existing.rank)
+            return candidate.rank < existing.rank;
+        if (candidate.isDefault !== existing.isDefault)
+            return !candidate.isDefault;
+        return candidate.order < existing.order;
+    }
+    // Sort branches deterministically. Non-default branches win ties, while
+    // distance from the branch head is the primary signal.
     const sorted = [...branches].sort((a, b) => {
         const aIsDefault = a.name === defaultBranch ? 1 : 0;
         const bIsDefault = b.name === defaultBranch ? 1 : 0;
-        return aIsDefault - bIsDefault;
+        return aIsDefault - bIsDefault || a.name.localeCompare(b.name);
     });
-    for (const branch of sorted) {
-        const result = await runGit(["log", branch.name, "--format=%H"], { cwd, timeout: 30_000 });
+    for (const [order, branch] of sorted.entries()) {
+        let result = await runGit(["rev-list", branch.name], { cwd, timeout: 30_000 });
+        if (result.exitCode !== 0 && branch.headSha) {
+            result = await runGit(["rev-list", branch.headSha], { cwd, timeout: 30_000 });
+        }
         if (result.exitCode !== 0)
             continue;
-        for (const line of result.stdout.trim().split("\n")) {
+        const lines = result.stdout.trim().split("\n");
+        for (let rank = 0; rank < lines.length; rank++) {
+            const line = lines[rank];
             const sha = line.trim();
             if (!sha || !targetShas.has(sha))
                 continue;
-            // Only assign if not already claimed by a non-default branch
-            if (!shaToBranch.has(sha)) {
-                shaToBranch.set(sha, branch.name);
+            const candidate = {
+                branch: branch.name,
+                rank,
+                isDefault: branch.name === defaultBranch,
+                order,
+            };
+            if (isBetterCandidate(candidate, shaToCandidate.get(sha))) {
+                shaToCandidate.set(sha, candidate);
             }
         }
     }
     // Apply resolved branches to commits
     for (const commit of commits) {
-        const resolved = shaToBranch.get(commit.sha);
+        const resolved = shaToCandidate.get(commit.sha)?.branch;
         if (resolved) {
             commit.branch = resolved;
         }
     }
     return commits;
 }
-/** Count total commits reachable from HEAD. */
+/** Count total commits reachable from all local/remote refs. */
 export async function collectCommitCount(cwd) {
-    const result = await runGit(["rev-list", "--count", "HEAD"], { cwd });
+    const result = await runGit(["rev-list", "--count", "--all"], { cwd });
     if (result.exitCode !== 0)
         return 0;
     return parseInt(result.stdout.trim(), 10) || 0;

package/dist/project-link/git-collector.js.map

@@ -1 +1 @@
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package/dist/project-link/link-command.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"link-command.d.ts","sourceRoot":"","sources":["../../src/project-link/link-command.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AAEH,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AACrD,OAAO,KAAK,EACV,WAAW,EACX,UAAU,EAOX,MAAM,YAAY,CAAC;AA4BpB;;;;;;;;;GASG;AACH,wBAAsB,WAAW,CAC/B,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,MAAM,EAAE,WAAW,EACnB,WAAW,EAAE,MAAM,EACnB,SAAS,EAAE,MAAM,EACjB,SAAS,EAAE,MAAM,EACjB,OAAO,GAAE,WAAgB,GACxB,OAAO,CAAC,UAAU,CAAC,CA0XrB"}
+{"version":3,"file":"link-command.d.ts","sourceRoot":"","sources":["../../src/project-link/link-command.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AAEH,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAC3C,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AACrD,OAAO,KAAK,EACV,WAAW,EACX,UAAU,EAOX,MAAM,YAAY,CAAC;AA8BpB;;;;;;;;;GASG;AACH,wBAAsB,WAAW,CAC/B,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,MAAM,EAAE,WAAW,EACnB,WAAW,EAAE,MAAM,EACnB,SAAS,EAAE,MAAM,EACjB,SAAS,EAAE,MAAM,EACjB,OAAO,GAAE,WAAgB,GACxB,OAAO,CAAC,UAAU,CAAC,CAmYrB"}

package/dist/project-link/link-command.js

@@ -11,9 +11,10 @@
  */
 import { collectRemoteUrl, collectDefaultBranch, collectBranches, collectCommitLogs, collectCommitCount, resolveCommitBranches, projectNameFromRemoteUrl, } from "./git-collector.js";
 import { discoverDocuments, loadDocSettings } from "./doc-discovery.js";
-import { getProjectLinkCache, upsertProjectLinkCache, clearProjectLinkCache, updateCachedCommitSha, updateCachedDocHashes, updateCachedQualified, } from "./cache.js";
+import { getProjectLinkCache, upsertProjectLinkCache, clearProjectLinkCache, updateCachedCommitSha, updateCachedDocHashes, updateCachedMetadata, updateCachedQualified, } from "./cache.js";
 import { checkQuality, formatQualityFeedback } from "./qualify.js";
 import { validateDocument } from "@varveai/adit-plans";
+import { collectGitRefsFingerprint, REFS_FINGERPRINT_CACHE_KEY } from "./auto-link.js";
 /** Maximum number of commits per upload batch */
 const COMMIT_BATCH_SIZE = 1000;
 /** Minimum staleness before re-uploading branches (1 hour) */
@@ -143,10 +144,9 @@ export async function linkCommand(db, client, projectRoot, projectId, serverUrl,
     let commitCount = 0;
     if (!options.skipCommits) {
         // Collect commits and resolve per-commit branch assignment by checking
-        // which branches each commit is reachable from. Non-default branches
-        // take priority so merged feature-branch commits keep their origin.
+        // all refs, including local-only branches that are not checked out.
         const commits = await collectCommitLogs(projectRoot, {
-            sinceCommitSha: cache.lastCommitSha,
+            allRefs: true,
         });
         const totalCommits = await collectCommitCount(projectRoot);
         // Resolve branch for each commit using collected branch data
@@ -168,7 +168,7 @@ export async function linkCommand(db, client, projectRoot, projectId, serverUrl,
                 const batch = commits.slice(i, i + COMMIT_BATCH_SIZE);
                 const response = await client.post("/api/project-link/commits", {
                     projectId: effectiveProjectId,
-                    sinceCommitSha: cache.lastCommitSha,
+                    sinceCommitSha: null,
                     commits: batch.map((c) => ({
                         sha: c.sha,
                         authorName: c.authorName,
@@ -193,6 +193,15 @@ export async function linkCommand(db, client, projectRoot, projectId, serverUrl,
             }
             log(`  ${uploaded} new commits uploaded (${commitCount} total)`);
         }
+        const refsFingerprint = await collectGitRefsFingerprint(projectRoot);
+        if (refsFingerprint) {
+            const docHashes = {
+                ...cache.docHashes,
+                [REFS_FINGERPRINT_CACHE_KEY]: refsFingerprint,
+            };
+            updateCachedMetadata(db, effectiveProjectId, serverUrl, docHashes);
+            cache.docHashes = docHashes;
+        }
     }
     else {
         log("  Skipping commit history (--skip-commits)");

package/dist/project-link/link-command.js.map

@@ -1 +1 @@
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package/dist/sync/auto-sync.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"auto-sync.d.ts","sourceRoot":"","sources":["../../src/sync/auto-sync.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;GAmBG;AAEH,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAiB3C;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAsB,eAAe,CACnC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,SAAS,EAAE,MAAM,EACjB,OAAO,CAAC,EAAE;IAAE,KAAK,CAAC,EAAE,OAAO,CAAA;CAAE,GAC5B,OAAO,CAAC,IAAI,CAAC,CA0Gf"}
+{"version":3,"file":"auto-sync.d.ts","sourceRoot":"","sources":["../../src/sync/auto-sync.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;GAmBG;AAEH,OAAO,KAAK,QAAQ,MAAM,gBAAgB,CAAC;AAkB3C;;;;;;;;;;;;;;;;GAgBG;AACH,wBAAsB,eAAe,CACnC,EAAE,EAAE,QAAQ,CAAC,QAAQ,EACrB,SAAS,EAAE,MAAM,EACjB,OAAO,CAAC,EAAE;IAAE,KAAK,CAAC,EAAE,OAAO,CAAA;CAAE,GAC5B,OAAO,CAAC,IAAI,CAAC,CAgHf"}

package/dist/sync/auto-sync.js

@@ -20,7 +20,7 @@
  */
 import { getSyncState } from "@varveai/adit-core";
 import { loadCloudConfig, DEFAULT_SERVER_URL } from "../config.js";
-import { loadCredentials, isTokenExpired, credentialsFromEnvToken, incrementSyncErrors, clearSyncErrors, isSyncDisabled, } from "../auth/credentials.js";
+import { loadCredentials, isTokenExpired, credentialsFromEnvToken, incrementSyncErrors, clearSyncErrors, isSyncDisabled, recordAuthFailure, } from "../auth/credentials.js";
 import { CloudClient } from "../http/client.js";
 import { CloudNetworkError, CloudAuthError } from "../http/errors.js";
 import { SyncEngine } from "./engine.js";
@@ -116,6 +116,12 @@ export async function triggerAutoSync(db, projectId, options) {
     catch (error) {
         // Track consecutive failures — disable sync after threshold
         const disabled = incrementSyncErrors();
+        if (error instanceof CloudAuthError) {
+            recordAuthFailure({
+                stage: "auto-sync",
+                message: error.message,
+            });
+        }
         // Fail silently — this is fire-and-forget.
         // CloudNetworkError: server unreachable, will retry next trigger
         // CloudAuthError: credentials invalid, user needs to re-login

package/dist/sync/auto-sync.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@varveai/adit-cloud",
-  "version": "0.3.3",
+  "version": "0.3.4",
   "description": "Cloud sync client for ADIT — device auth, incremental push, conflict resolution",
   "type": "module",
   "files": [
@@ -15,9 +15,9 @@
     }
   },
   "dependencies": {
-    "@varveai/adit-core": "0.3.3",
-    "@varveai/adit-engine": "0.3.3",
-    "@varveai/adit-plans": "0.3.3"
+    "@varveai/adit-core": "0.3.4",
+    "@varveai/adit-engine": "0.3.4",
+    "@varveai/adit-plans": "0.3.4"
   },
   "devDependencies": {
     "@types/better-sqlite3": "^7.6.13",