npm - @unbrained/pm-cli - Versions diffs - 2026.6.5 → 2026.6.7 - Mend

@unbrained/pm-cli 2026.6.5 → 2026.6.7

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package/dist/cli/commands/reindex.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"reindex.js","sources":["cli/commands/reindex.ts"],"sourceRoot":"/","sourcesContent":["import fs from \"node:fs/promises\";\nimport path from \"node:path\";\nimport { toNonEmptyStringOrUndefined } from \"../../core/shared/primitives.js\";\nimport { getActiveExtensionRegistrations, runActiveOnIndexHooks, runActiveOnWriteHooks } from \"../../core/extensions/index.js\";\nimport { collectRegisteredItemFieldNames } from \"../../core/extensions/item-fields.js\";\nimport {\n resolveRegisteredSearchProvider,\n resolveRegisteredVectorStoreAdapter,\n} from \"../../core/extensions/runtime-registrations.js\";\nimport { pathExists, writeFileAtomic } from \"../../core/fs/fs-utils.js\";\nimport { resolveItemTypeRegistry } from \"../../core/item/type-registry.js\";\nimport { parseItemDocument } from \"../../core/item/item-format.js\";\nimport { acquireLock } from \"../../core/lock/lock.js\";\nimport { buildSearchCorpus, buildSemanticCorpusInput } from \"../../core/search/corpus.js\";\nimport { executeEmbeddingBatchesWithRetry } from \"../../core/search/embedding-batches.js\";\nimport { readVectorizationStatusLedger, writeVectorizationStatusLedger } from \"../../core/search/cache.js\";\nimport { REINDEX_LOCK_ID } from \"../../core/search/background-refresh.js\";\nimport { resolveEmbeddingProviders } from \"../../core/search/providers.js\";\nimport { resolveSettingsWithSemanticRuntimeDefaults } from \"../../core/search/semantic-defaults.js\";\nimport { executeVectorDelete, executeVectorReset, executeVectorUpsert, resolveVectorStores } from \"../../core/search/vector-stores.js\";\nimport {\n buildVectorizationEmbeddingIdentity,\n buildVectorizationEmbeddingMetadata,\n hasVectorizationEmbeddingIdentityChanged,\n hasVectorizationVectorDimensionChanged,\n inferConsistentVectorDimension,\n} from \"../../core/search/vectorization-metadata.js\";\nimport type {\n VectorizationEmbeddingIdentity,\n VectorizationEmbeddingMetadata,\n} from \"../../core/search/vectorization-metadata.js\";\nimport { EXIT_CODE } from \"../../core/shared/constants.js\";\nimport type { GlobalOptions } from \"../../core/shared/command-types.js\";\nimport { PmCliError } from \"../../core/shared/errors.js\";\nimport { nowIso } from \"../../core/shared/time.js\";\nimport { listAllDocumentCandidatesCached, type CachedDocumentCandidate } from \"../../core/store/front-matter-cache.js\";\nimport { getSettingsPath, resolvePmRoot } from \"../../core/store/paths.js\";\nimport { readSettings } from \"../../core/store/settings.js\";\nimport type { ItemDocument, PmSettings } from \"../../types/index.js\";\n\nconst MANIFEST_PATH = \"index/manifest.json\";\nconst EMBEDDINGS_PATH = \"search/embeddings.jsonl\";\n\nexport interface ReindexOptions {\n mode?: string;\n progress?: boolean;\n}\n\nexport interface ReindexResult {\n ok: boolean;\n mode: \"keyword\" \| \"semantic\" \| \"hybrid\";\n total_items: number;\n semantic: {\n enabled: boolean;\n stale_items: number;\n unchanged_items: number;\n embedded_items: number;\n vector_upserted: number;\n batches_completed: number;\n };\n artifacts: {\n manifest: string;\n embeddings: string;\n };\n warnings: string[];\n generated_at: string;\n}\n\nfunction shouldEmitReindexProgress(options: ReindexOptions): boolean {\n return options.progress === true \|\| process.stderr.isTTY === true;\n}\n\nfunction emitReindexProgress(enabled: boolean, message: string): void {\n if (!enabled) {\n return;\n }\n try {\n process.stderr.write(`[pm reindex] ${message}\\n`);\n } catch {\n // Ignore transient stderr write failures.\n }\n}\n\nfunction parseMode(raw: string \| undefined): \"keyword\" \| \"semantic\" \| \"hybrid\" {\n const normalized = (raw ?? \"keyword\").trim().toLowerCase();\n if (normalized === \"keyword\") {\n return \"keyword\";\n }\n if (normalized === \"semantic\" \|\| normalized === \"hybrid\") {\n return normalized;\n }\n throw new PmCliError(\"Reindex mode must be one of keyword\|semantic\|hybrid\", EXIT_CODE.USAGE);\n}\n\nasync function loadDocumentCandidates(\n pmRoot: string,\n itemFormat: \"toon\" \| \"json_markdown\",\n typeToFolder: Record<string, string>,\n schema: PmSettings[\"schema\"],\n): Promise<{ candidates: CachedDocumentCandidate[]; warnings: string[] }> {\n const warnings: string[] = [];\n const candidates = await listAllDocumentCandidatesCached(pmRoot, itemFormat, typeToFolder, warnings, schema);\n return {\n candidates,\n warnings,\n };\n}\n\nasync function hydrateDocuments(\n pmRoot: string,\n candidates: CachedDocumentCandidate[],\n schema: PmSettings[\"schema\"],\n warnings: string[],\n itemIds?: Set<string>,\n): Promise<ItemDocument[]> {\n const extensionFieldNames = collectRegisteredItemFieldNames(getActiveExtensionRegistrations());\n const hydrated: ItemDocument[] = [];\n for (const candidate of candidates) {\n if (itemIds && !itemIds.has(candidate.metadata.id)) {\n continue;\n }\n if (typeof candidate.body === \"string\") {\n hydrated.push({\n metadata: candidate.metadata,\n body: candidate.body,\n });\n continue;\n }\n try {\n const raw = await fs.readFile(candidate.item_path, \"utf8\");\n const parsed = parseItemDocument(raw, {\n format: candidate.item_format,\n schema,\n extensionFieldNames,\n onWarning: (warning) => warnings.push(warning),\n });\n hydrated.push({\n metadata: candidate.metadata,\n body: parsed.body,\n });\n } catch {\n warnings.push(`item_list_item_read_failed:${path.relative(pmRoot, candidate.item_path)}`);\n hydrated.push({\n metadata: candidate.metadata,\n body: \"\",\n });\n }\n }\n return hydrated;\n}\n\nfunction buildKeywordRecord(document: ItemDocument, mode: \"keyword\" \| \"semantic\" \| \"hybrid\"): Record<string, unknown> {\n const item = document.metadata;\n return {\n id: item.id,\n mode,\n updated_at: item.updated_at,\n corpus: buildSearchCorpus(document),\n };\n}\n\ntype ExtensionEmbedBatch = (context: {\n inputs: string[];\n settings: PmSettings;\n model: string;\n}) => Promise<number[][]> \| number[][];\n\ntype ExtensionEmbedOne = (context: {\n input: string;\n settings: PmSettings;\n model: string;\n}) => Promise<number[]> \| number[];\n\ntype ExtensionVectorUpsert = (context: {\n points: Array<{\n id: string;\n vector: number[];\n payload: Record<string, unknown>;\n }>;\n settings: PmSettings;\n}) => Promise<void> \| void;\n\ntype ExtensionVectorDelete = (context: {\n ids: string[];\n settings: PmSettings;\n}) => Promise<void> \| void;\n\ninterface ExtensionVectorAdapter {\n name: string;\n upsert: ExtensionVectorUpsert;\n delete?: ExtensionVectorDelete;\n}\n\ninterface ReindexEmbeddingExecutionResult {\n vectors: number[][];\n embeddingIdentity: VectorizationEmbeddingIdentity;\n}\n\nconst toOptionalNonEmptyString = toNonEmptyStringOrUndefined;\n\nfunction resolveExtensionSearchEmbedding(\n settings: PmSettings,\n): { name: string; embedBatch?: ExtensionEmbedBatch; embed?: ExtensionEmbedOne } \| null {\n const registrations = getActiveExtensionRegistrations();\n const providerName = toOptionalNonEmptyString(settings.search?.provider);\n const registration = resolveRegisteredSearchProvider(registrations, providerName);\n if (!registration) {\n return null;\n }\n const runtimeDefinition = registration.runtime_definition ?? registration.definition;\n const name =\n toOptionalNonEmptyString((runtimeDefinition as { name?: unknown }).name) ??\n toOptionalNonEmptyString((registration.definition as { name?: unknown }).name) ??\n providerName;\n if (!name) {\n return null;\n }\n const embedBatch = (runtimeDefinition as { embedBatch?: unknown; embed_batch?: unknown }).embedBatch;\n const embedBatchSnake = (runtimeDefinition as { embedBatch?: unknown; embed_batch?: unknown }).embed_batch;\n const embed = (runtimeDefinition as { embed?: unknown }).embed;\n const resolvedEmbedBatch =\n typeof embedBatch === \"function\"\n ? (embedBatch as ExtensionEmbedBatch)\n : typeof embedBatchSnake === \"function\"\n ? (embedBatchSnake as ExtensionEmbedBatch)\n : undefined;\n const resolvedEmbed = typeof embed === \"function\" ? (embed as ExtensionEmbedOne) : undefined;\n if (!resolvedEmbedBatch && !resolvedEmbed) {\n return null;\n }\n return {\n name,\n embedBatch: resolvedEmbedBatch,\n embed: resolvedEmbed,\n };\n}\n\nfunction resolveExtensionVectorAdapter(settings: PmSettings): ExtensionVectorAdapter \| null {\n const registrations = getActiveExtensionRegistrations();\n const adapterName = toOptionalNonEmptyString(settings.vector_store?.adapter);\n const registration = resolveRegisteredVectorStoreAdapter(registrations, adapterName);\n if (!registration) {\n return null;\n }\n const runtimeDefinition = registration.runtime_definition ?? registration.definition;\n const name =\n toOptionalNonEmptyString((runtimeDefinition as { name?: unknown }).name) ??\n toOptionalNonEmptyString((registration.definition as { name?: unknown }).name) ??\n adapterName;\n const upsert = (runtimeDefinition as { upsert?: unknown }).upsert;\n const deleteHandler = (runtimeDefinition as { delete?: unknown }).delete;\n if (!name \|\| typeof upsert !== \"function\") {\n return null;\n }\n return {\n name,\n upsert: upsert as ExtensionVectorUpsert,\n ...(typeof deleteHandler === \"function\" ? { delete: deleteHandler as ExtensionVectorDelete } : {}),\n };\n}\n\nfunction assertVector(value: unknown, context: string): number[] {\n if (!Array.isArray(value) \|\| value.some((entry) => typeof entry !== \"number\" \|\| !Number.isFinite(entry))) {\n throw new PmCliError(`Invalid vector returned by ${context}`, EXIT_CODE.GENERIC_FAILURE);\n }\n return value;\n}\n\nasync function executeExtensionEmbedding(\n extensionEmbedding: { name: string; embedBatch?: ExtensionEmbedBatch; embed?: ExtensionEmbedOne },\n settings: PmSettings,\n corpusInputs: string[],\n): Promise<number[][]> {\n const model = settings.search?.embedding_model?.trim() \|\| \"text-embedding-3-small\";\n if (extensionEmbedding.embedBatch) {\n const vectors = await Promise.resolve(\n extensionEmbedding.embedBatch({\n inputs: corpusInputs,\n settings,\n model,\n }),\n );\n if (!Array.isArray(vectors)) {\n throw new PmCliError(\n `Extension search provider \"${extensionEmbedding.name}\" embedBatch must return an array of vectors`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n return vectors.map((vector, index) =>\n assertVector(vector, `extension search provider \"${extensionEmbedding.name}\" embedBatch output at index ${index}`),\n );\n }\n if (!extensionEmbedding.embed) {\n throw new PmCliError(\n `Extension search provider \"${extensionEmbedding.name}\" does not implement embed/embedBatch`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n const vectors: number[][] = [];\n for (const [index, input] of corpusInputs.entries()) {\n const vector = await Promise.resolve(\n extensionEmbedding.embed({\n input,\n settings,\n model,\n }),\n );\n vectors.push(assertVector(vector, `extension search provider \"${extensionEmbedding.name}\" embed output at index ${index}`));\n }\n return vectors;\n}\n\nfunction resolveExtensionEmbeddingModel(settings: PmSettings): string {\n return settings.search?.embedding_model?.trim() \|\| \"text-embedding-3-small\";\n}\n\nfunction resolveReindexEmbeddingIdentity(\n settings: PmSettings,\n activeEmbeddingProvider: ReturnType<typeof resolveEmbeddingProviders>[\"active\"],\n extensionEmbedding: { name: string } \| null,\n): VectorizationEmbeddingIdentity {\n const identity = extensionEmbedding\n ? buildVectorizationEmbeddingIdentity(extensionEmbedding.name, resolveExtensionEmbeddingModel(settings))\n : activeEmbeddingProvider\n ? buildVectorizationEmbeddingIdentity(activeEmbeddingProvider.name, activeEmbeddingProvider.model)\n : null;\n if (!identity) {\n throw new PmCliError(\n `No embedding identity available for semantic reindex mode`,\n EXIT_CODE.USAGE,\n );\n }\n return identity;\n}\n\nfunction collectLedgerOrphanIds(ledgerEntries: Record<string, string>, currentIds: Set<string>): string[] {\n return Object.keys(ledgerEntries)\n .filter((id) => !currentIds.has(id))\n .sort((left, right) => left.localeCompare(right));\n}\n\nasync function executeReindexEmbedding(\n settings: PmSettings,\n requestedMode: \"keyword\" \| \"semantic\" \| \"hybrid\",\n activeEmbeddingProvider: ReturnType<typeof resolveEmbeddingProviders>[\"active\"],\n extensionEmbedding: { name: string; embedBatch?: ExtensionEmbedBatch; embed?: ExtensionEmbedOne } \| null,\n documents: ItemDocument[],\n semanticWarnings: string[],\n semanticSummary: ReindexResult[\"semantic\"],\n progressEnabled: boolean,\n): Promise<ReindexEmbeddingExecutionResult> {\n const semanticProviderName = extensionEmbedding?.name ?? activeEmbeddingProvider?.name;\n const corpusInputs = documents.map((document) => buildSemanticCorpusInput(document, { providerName: semanticProviderName }));\n let vectors: number[][] = [];\n let embeddingIdentity: VectorizationEmbeddingIdentity \| null = null;\n if (extensionEmbedding) {\n try {\n vectors = await executeExtensionEmbedding(extensionEmbedding, settings, corpusInputs);\n embeddingIdentity = buildVectorizationEmbeddingIdentity(extensionEmbedding.name, resolveExtensionEmbeddingModel(settings));\n } catch (error: unknown) {\n if (!activeEmbeddingProvider) {\n throw new PmCliError(\n `Extension search provider \"${extensionEmbedding.name}\" failed to generate embeddings: ${error instanceof Error ? error.message : String(error)}`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n semanticWarnings.push(\n `Extension search provider \"${extensionEmbedding.name}\" failed; falling back to built-in provider (${error instanceof Error ? error.message : String(error)})`,\n );\n }\n }\n if (vectors.length === 0) {\n if (!activeEmbeddingProvider) {\n throw new PmCliError(\n `No embedding executor available for reindex mode '${requestedMode}'`,\n EXIT_CODE.USAGE,\n );\n }\n const embeddingResult = await executeEmbeddingBatchesWithRetry(activeEmbeddingProvider, settings, corpusInputs, {\n onProgress: (event) => {\n if (event.phase === \"complete\") {\n semanticSummary.batches_completed = event.batch_index;\n }\n emitReindexProgress(\n progressEnabled,\n `embedding_batch_${event.phase} batch=${event.batch_index}/${event.batch_total} size=${event.batch_size} completed_inputs=${event.completed_inputs}/${event.total_inputs}`,\n );\n },\n });\n semanticWarnings.push(...embeddingResult.warnings);\n vectors = embeddingResult.vectors;\n embeddingIdentity = buildVectorizationEmbeddingIdentity(activeEmbeddingProvider.name, activeEmbeddingProvider.model);\n }\n emitReindexProgress(progressEnabled, `embedding_complete vectors=${vectors.length}`);\n if (vectors.length !== documents.length) {\n throw new PmCliError(\n `Embedding output size mismatch (expected ${documents.length}, received ${vectors.length})`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n if (!embeddingIdentity) {\n throw new PmCliError(\n `No embedding identity available for reindex mode '${requestedMode}'`,\n EXIT_CODE.USAGE,\n );\n }\n return { vectors, embeddingIdentity };\n}\n\nasync function resetVectorStoreForReindex(\n activeVectorStore: ReturnType<typeof resolveVectorStores>[\"active\"],\n extensionVectorAdapter: ExtensionVectorAdapter \| null,\n ledgerEntries: Record<string, string>,\n settings: PmSettings,\n semanticWarnings: string[],\n vectorDimension?: number,\n): Promise<void> {\n const knownIds = Object.keys(ledgerEntries);\n if (extensionVectorAdapter) {\n if (knownIds.length > 0 && extensionVectorAdapter.delete) {\n try {\n await Promise.resolve(extensionVectorAdapter.delete({ ids: knownIds.sort((left, right) => left.localeCompare(right)), settings }));\n } catch (error: unknown) {\n throw new PmCliError(\n `Extension vector adapter \"${extensionVectorAdapter.name}\" failed to delete vectors during reindex reset: ${error instanceof Error ? error.message : String(error)}`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n } else if (knownIds.length > 0) {\n semanticWarnings.push(\n `search_semantic_reindex_reset_skipped:adapter=${extensionVectorAdapter.name}:known_ids=${knownIds.length}`,\n );\n }\n if (!activeVectorStore) {\n return;\n }\n }\n if (activeVectorStore) {\n await executeVectorReset(activeVectorStore, knownIds, {}, vectorDimension);\n }\n}\n\nasync function pruneReindexOrphanVectors(\n activeVectorStore: ReturnType<typeof resolveVectorStores>[\"active\"],\n extensionVectorAdapter: ExtensionVectorAdapter \| null,\n orphanIds: string[],\n settings: PmSettings,\n semanticWarnings: string[],\n): Promise<void> {\n if (orphanIds.length === 0) {\n return;\n }\n if (extensionVectorAdapter) {\n if (extensionVectorAdapter.delete) {\n try {\n await Promise.resolve(extensionVectorAdapter.delete({ ids: orphanIds, settings }));\n } catch (error: unknown) {\n throw new PmCliError(\n `Extension vector adapter \"${extensionVectorAdapter.name}\" failed to delete orphan vectors during reindex: ${error instanceof Error ? error.message : String(error)}`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n } else {\n semanticWarnings.push(\n `search_semantic_reindex_orphan_prune_skipped:adapter=${extensionVectorAdapter.name}:count=${orphanIds.length}`,\n );\n }\n if (!activeVectorStore) {\n return;\n }\n }\n if (activeVectorStore) {\n await executeVectorDelete(activeVectorStore, orphanIds);\n }\n}\n\nexport async function runReindex(options: ReindexOptions, global: GlobalOptions): Promise<ReindexResult> {\n const requestedMode = parseMode(options.mode);\n const progressEnabled = shouldEmitReindexProgress(options);\n emitReindexProgress(progressEnabled, `start mode=${requestedMode}`);\n const pmRoot = resolvePmRoot(process.cwd(), global.path);\n if (!(await pathExists(getSettingsPath(pmRoot)))) {\n throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);\n }\n\n const settings = resolveSettingsWithSemanticRuntimeDefaults(await readSettings(pmRoot)).settings;\n let releaseReindexLock: (() => Promise<void>) \| null = null;\n try {\n releaseReindexLock = await acquireLock(\n pmRoot,\n REINDEX_LOCK_ID,\n settings.locks.ttl_seconds,\n process.env.PM_AUTHOR ?? \"pm-reindex\",\n false,\n settings.governance.force_required_for_stale_lock,\n );\n } catch (error: unknown) {\n if (error instanceof PmCliError && error.exitCode === EXIT_CODE.CONFLICT) {\n throw new PmCliError(\n \"Another pm reindex run is already active for this project. Wait for it to finish before starting a new keyword, semantic, or hybrid reindex.\",\n EXIT_CODE.CONFLICT,\n {\n code: \"reindex_already_running\",\n type: \"urn:pm-cli:error:reindex_already_running\",\n why: \"Semantic reindex can be expensive and duplicate runs compete for the same local embedding model and vector store.\",\n nextSteps: [\n \"Check active pm reindex processes before starting another reindex.\",\n \"Rerun with --progress when you need non-interactive visibility.\",\n ],\n },\n );\n }\n throw error;\n }\n\n try {\n const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());\n const extensionEmbedding = resolveExtensionSearchEmbedding(settings);\n const extensionVectorAdapter = resolveExtensionVectorAdapter(settings);\n let activeEmbeddingProvider: ReturnType<typeof resolveEmbeddingProviders>[\"active\"] = null;\n let activeVectorStore: ReturnType<typeof resolveVectorStores>[\"active\"] = null;\n if (requestedMode !== \"keyword\") {\n const providerResolution = resolveEmbeddingProviders(settings);\n if (!providerResolution.active && !extensionEmbedding) {\n throw new PmCliError(\n `Reindex mode '${requestedMode}' requires a configured embedding provider in settings.providers.openai/settings.providers.ollama or an extension provider selected by settings.search.provider`,\n EXIT_CODE.USAGE,\n );\n }\n const vectorResolution = resolveVectorStores(settings);\n if (!vectorResolution.active && !extensionVectorAdapter) {\n throw new PmCliError(\n `Reindex mode '${requestedMode}' requires a configured vector store in settings.vector_store.qdrant/settings.vector_store.lancedb or an extension adapter selected by settings.vector_store.adapter`,\n EXIT_CODE.USAGE,\n );\n }\n activeEmbeddingProvider = providerResolution.active;\n activeVectorStore = vectorResolution.active;\n }\n const mode = requestedMode;\n emitReindexProgress(progressEnabled, \"loading item corpus\");\n const loadedCandidates = await loadDocumentCandidates(pmRoot, settings.item_format, typeRegistry.type_to_folder, settings.schema);\n const reindexWarnings = [...loadedCandidates.warnings];\n const documentCandidates = loadedCandidates.candidates;\n const metadataDocuments: ItemDocument[] = documentCandidates.map((candidate) => ({\n metadata: candidate.metadata,\n body: typeof candidate.body === \"string\" ? candidate.body : \"\",\n }));\n emitReindexProgress(progressEnabled, `loaded_items=${metadataDocuments.length}`);\n const generatedAt = nowIso();\n\n const manifest = {\n version: 1,\n mode,\n generated_at: generatedAt,\n total_items: metadataDocuments.length,\n items: metadataDocuments.map((document) => ({\n id: document.metadata.id,\n type: document.metadata.type,\n status: document.metadata.status,\n priority: document.metadata.priority,\n updated_at: document.metadata.updated_at,\n })),\n };\n\n const manifestPath = path.join(pmRoot, MANIFEST_PATH);\n const embeddingsPath = path.join(pmRoot, EMBEDDINGS_PATH);\n\n let documentsForKeywordArtifacts =\n mode === \"keyword\"\n ? await hydrateDocuments(pmRoot, documentCandidates, settings.schema, reindexWarnings)\n : metadataDocuments;\n const semanticWarnings: string[] = [];\n const vectorizationLedgerEntries: Record<string, string> = {};\n let vectorizationEmbeddingMetadata: VectorizationEmbeddingMetadata \| null = null;\n const semanticSummary = {\n enabled: mode !== \"keyword\",\n stale_items: 0,\n unchanged_items: 0,\n embedded_items: 0,\n vector_upserted: 0,\n batches_completed: 0,\n };\n if (mode !== \"keyword\" && metadataDocuments.length > 0) {\n const ledger = await readVectorizationStatusLedger(pmRoot);\n semanticWarnings.push(...ledger.warnings);\n const embeddingIdentity = resolveReindexEmbeddingIdentity(settings, activeEmbeddingProvider, extensionEmbedding);\n const currentIds = new Set(metadataDocuments.map((document) => document.metadata.id));\n const orphanIds = collectLedgerOrphanIds(ledger.entries, currentIds);\n let resetRequired = hasVectorizationEmbeddingIdentityChanged(ledger.embedding, embeddingIdentity);\n let staleIds = new Set(\n (resetRequired ? metadataDocuments : metadataDocuments.filter((document) => ledger.entries[document.metadata.id] !== document.metadata.updated_at))\n .map((document) => document.metadata.id),\n );\n let staleDocuments = staleIds.size > 0\n ? await hydrateDocuments(pmRoot, documentCandidates, settings.schema, reindexWarnings, staleIds)\n : [];\n let freshDocuments = metadataDocuments.length - staleDocuments.length;\n semanticSummary.stale_items = staleDocuments.length;\n semanticSummary.unchanged_items = freshDocuments;\n for (const document of metadataDocuments) {\n vectorizationLedgerEntries[document.metadata.id] = document.metadata.updated_at;\n }\n if (staleDocuments.length === 0) {\n emitReindexProgress(progressEnabled, `embedding_skipped unchanged_items=${freshDocuments}`);\n semanticWarnings.push(`search_semantic_reindex_skipped_unchanged:count=${freshDocuments}`);\n } else {\n emitReindexProgress(progressEnabled, `embedding_start items=${staleDocuments.length} unchanged_items=${freshDocuments}`);\n let embeddingResult = await executeReindexEmbedding(\n settings,\n requestedMode,\n activeEmbeddingProvider,\n extensionEmbedding,\n staleDocuments,\n semanticWarnings,\n semanticSummary,\n progressEnabled,\n );\n let vectors = embeddingResult.vectors;\n let actualEmbeddingIdentity = embeddingResult.embeddingIdentity;\n let vectorDimension = inferConsistentVectorDimension(vectors, \"Reindex embeddings\");\n if (\n !resetRequired &&\n (hasVectorizationEmbeddingIdentityChanged(ledger.embedding, actualEmbeddingIdentity) \|\|\n hasVectorizationVectorDimensionChanged(ledger.embedding, vectorDimension))\n ) {\n resetRequired = true;\n staleIds = new Set(metadataDocuments.map((document) => document.metadata.id));\n staleDocuments = await hydrateDocuments(pmRoot, documentCandidates, settings.schema, reindexWarnings, staleIds);\n freshDocuments = 0;\n semanticSummary.stale_items = staleDocuments.length;\n semanticSummary.unchanged_items = 0;\n emitReindexProgress(progressEnabled, `embedding_dimension_changed reset_items=${staleDocuments.length}`);\n embeddingResult = await executeReindexEmbedding(\n settings,\n requestedMode,\n activeEmbeddingProvider,\n extensionEmbedding,\n staleDocuments,\n semanticWarnings,\n semanticSummary,\n progressEnabled,\n );\n vectors = embeddingResult.vectors;\n actualEmbeddingIdentity = embeddingResult.embeddingIdentity;\n vectorDimension = inferConsistentVectorDimension(vectors, \"Reindex embeddings\");\n }\n if (resetRequired) {\n emitReindexProgress(progressEnabled, \"vector_reset_start\");\n await resetVectorStoreForReindex(\n activeVectorStore,\n extensionVectorAdapter,\n ledger.entries,\n settings,\n semanticWarnings,\n ledger.embedding ? vectorDimension : undefined,\n );\n emitReindexProgress(progressEnabled, \"vector_reset_complete\");\n } else {\n await pruneReindexOrphanVectors(activeVectorStore, extensionVectorAdapter, orphanIds, settings, semanticWarnings);\n }\n vectorizationEmbeddingMetadata = buildVectorizationEmbeddingMetadata(actualEmbeddingIdentity, vectorDimension);\n const points = staleDocuments.map((document, index) => ({\n id: document.metadata.id,\n vector: assertVector(vectors[index], `reindex embeddings output at index ${index}`),\n payload: {\n id: document.metadata.id,\n type: document.metadata.type,\n status: document.metadata.status,\n priority: document.metadata.priority,\n updated_at: document.metadata.updated_at,\n },\n }));\n semanticSummary.embedded_items = vectors.length;\n if (extensionVectorAdapter) {\n try {\n emitReindexProgress(progressEnabled, `vector_upsert_start adapter=${extensionVectorAdapter.name} points=${points.length}`);\n await Promise.resolve(\n extensionVectorAdapter.upsert({\n points,\n settings,\n }),\n );\n semanticSummary.vector_upserted = points.length;\n emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${extensionVectorAdapter.name}`);\n } catch (error: unknown) {\n if (!activeVectorStore) {\n throw new PmCliError(\n `Extension vector adapter \"${extensionVectorAdapter.name}\" failed to upsert vectors: ${error instanceof Error ? error.message : String(error)}`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n semanticWarnings.push(\n `Extension vector adapter \"${extensionVectorAdapter.name}\" failed; falling back to built-in vector store (${error instanceof Error ? error.message : String(error)})`,\n );\n emitReindexProgress(progressEnabled, \"vector_upsert_fallback built_in_store\");\n await executeVectorUpsert(activeVectorStore, points);\n semanticSummary.vector_upserted = points.length;\n emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${activeVectorStore.name}`);\n }\n } else if (activeVectorStore) {\n emitReindexProgress(progressEnabled, `vector_upsert_start adapter=${activeVectorStore.name} points=${points.length}`);\n await executeVectorUpsert(activeVectorStore, points);\n semanticSummary.vector_upserted = points.length;\n emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${activeVectorStore.name}`);\n } else {\n throw new PmCliError(\n `No vector upsert executor available for reindex mode '${requestedMode}'`,\n EXIT_CODE.USAGE,\n );\n }\n if (freshDocuments > 0) {\n semanticWarnings.push(`search_semantic_reindex_skipped_unchanged:count=${freshDocuments}`);\n }\n const staleDocumentsById = new Map(staleDocuments.map((document) => [document.metadata.id, document]));\n documentsForKeywordArtifacts = metadataDocuments.map(\n (document) => staleDocumentsById.get(document.metadata.id) ?? document,\n );\n }\n if (staleDocuments.length === 0) {\n await pruneReindexOrphanVectors(activeVectorStore, extensionVectorAdapter, orphanIds, settings, semanticWarnings);\n vectorizationEmbeddingMetadata = ledger.embedding;\n }\n }\n const embeddingsLines = documentsForKeywordArtifacts.map((document) => JSON.stringify(buildKeywordRecord(document, mode))).join(\"\\n\");\n emitReindexProgress(progressEnabled, \"writing keyword artifacts\");\n await writeFileAtomic(manifestPath, `${JSON.stringify(manifest, null, 2)}\\n`);\n await writeFileAtomic(embeddingsPath, `${embeddingsLines}\\n`);\n const vectorizationWarnings: string[] = [];\n if (mode !== \"keyword\") {\n try {\n emitReindexProgress(progressEnabled, \"writing vectorization status ledger\");\n await writeVectorizationStatusLedger(pmRoot, vectorizationLedgerEntries, vectorizationEmbeddingMetadata);\n } catch (error: unknown) {\n vectorizationWarnings.push(\n `search_vectorization_status_ledger_write_failed:${error instanceof Error ? error.message : String(error)}`,\n );\n }\n }\n const hookWarnings = [\n ...(await runActiveOnWriteHooks({\n path: manifestPath,\n scope: \"project\",\n op: \"reindex:manifest\",\n })),\n ...(await runActiveOnWriteHooks({\n path: embeddingsPath,\n scope: \"project\",\n op: \"reindex:embeddings\",\n })),\n ...(await runActiveOnIndexHooks({\n mode,\n total_items: metadataDocuments.length,\n })),\n ];\n emitReindexProgress(progressEnabled, \"done\");\n\n return {\n ok: true,\n mode,\n total_items: metadataDocuments.length,\n semantic: semanticSummary,\n artifacts: {\n manifest: MANIFEST_PATH,\n embeddings: EMBEDDINGS_PATH,\n },\n warnings: [...reindexWarnings, ...semanticWarnings, ...vectorizationWarnings, ...hookWarnings],\n generated_at: generatedAt,\n };\n } finally {\n await releaseReindexLock?.();\n 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1	+ {"version":3,"file":"reindex.js","sources":["cli/commands/reindex.ts"],"sourceRoot":"/","sourcesContent":["import fs from \"node:fs/promises\";\nimport path from \"node:path\";\nimport { toNonEmptyStringOrUndefined } from \"../../core/shared/primitives.js\";\nimport { getActiveExtensionRegistrations, runActiveOnIndexHooks, runActiveOnWriteHooks } from \"../../core/extensions/index.js\";\nimport { collectRegisteredItemFieldNames } from \"../../core/extensions/item-fields.js\";\nimport {\n resolveRegisteredSearchProvider,\n resolveRegisteredVectorStoreAdapter,\n} from \"../../core/extensions/runtime-registrations.js\";\nimport { pathExists, writeFileAtomic } from \"../../core/fs/fs-utils.js\";\nimport { resolveItemTypeRegistry } from \"../../core/item/type-registry.js\";\nimport { parseItemDocument } from \"../../core/item/item-format.js\";\nimport { acquireLock } from \"../../core/lock/lock.js\";\nimport {\n buildSearchCorpus,\n buildSemanticCorpusInput,\n resolveSemanticCorpusCharacterLimit,\n} from \"../../core/search/corpus.js\";\nimport { executeEmbeddingBatchesWithRetry } from \"../../core/search/embedding-batches.js\";\nimport { readVectorizationStatusLedger, writeVectorizationStatusLedger } from \"../../core/search/cache.js\";\nimport { REINDEX_LOCK_ID } from \"../../core/search/background-refresh.js\";\nimport { resolveEmbeddingProviders } from \"../../core/search/providers.js\";\nimport { resolveSettingsWithSemanticRuntimeDefaults } from \"../../core/search/semantic-defaults.js\";\nimport { executeVectorDelete, executeVectorReset, executeVectorUpsert, resolveVectorStores } from \"../../core/search/vector-stores.js\";\nimport {\n buildVectorizationEmbeddingIdentity,\n buildVectorizationEmbeddingMetadata,\n hasVectorizationEmbeddingIdentityChanged,\n hasVectorizationVectorDimensionChanged,\n inferConsistentVectorDimension,\n} from \"../../core/search/vectorization-metadata.js\";\nimport type {\n VectorizationEmbeddingIdentity,\n VectorizationEmbeddingMetadata,\n} from \"../../core/search/vectorization-metadata.js\";\nimport { EXIT_CODE } from \"../../core/shared/constants.js\";\nimport type { GlobalOptions } from \"../../core/shared/command-types.js\";\nimport { PmCliError } from \"../../core/shared/errors.js\";\nimport { nowIso } from \"../../core/shared/time.js\";\nimport { listAllDocumentCandidatesCached, type CachedDocumentCandidate } from \"../../core/store/front-matter-cache.js\";\nimport { getSettingsPath, resolvePmRoot } from \"../../core/store/paths.js\";\nimport { readSettings } from \"../../core/store/settings.js\";\nimport type { ItemDocument, PmSettings } from \"../../types/index.js\";\n\nconst MANIFEST_PATH = \"index/manifest.json\";\nconst EMBEDDINGS_PATH = \"search/embeddings.jsonl\";\n\nexport interface ReindexOptions {\n mode?: string;\n progress?: boolean;\n}\n\nexport interface ReindexResult {\n ok: boolean;\n mode: \"keyword\" \| \"semantic\" \| \"hybrid\";\n total_items: number;\n semantic: {\n enabled: boolean;\n stale_items: number;\n unchanged_items: number;\n embedded_items: number;\n vector_upserted: number;\n batches_completed: number;\n };\n artifacts: {\n manifest: string;\n embeddings: string;\n };\n warnings: string[];\n generated_at: string;\n}\n\nfunction shouldEmitReindexProgress(options: ReindexOptions): boolean {\n return options.progress === true \|\| process.stderr.isTTY === true;\n}\n\nfunction emitReindexProgress(enabled: boolean, message: string): void {\n if (!enabled) {\n return;\n }\n try {\n process.stderr.write(`[pm reindex] ${message}\\n`);\n } catch {\n // Ignore transient stderr write failures.\n }\n}\n\nfunction parseMode(raw: string \| undefined): \"keyword\" \| \"semantic\" \| \"hybrid\" {\n const normalized = (raw ?? \"keyword\").trim().toLowerCase();\n if (normalized === \"keyword\") {\n return \"keyword\";\n }\n if (normalized === \"semantic\" \|\| normalized === \"hybrid\") {\n return normalized;\n }\n throw new PmCliError(\"Reindex mode must be one of keyword\|semantic\|hybrid\", EXIT_CODE.USAGE);\n}\n\nasync function loadDocumentCandidates(\n pmRoot: string,\n itemFormat: \"toon\" \| \"json_markdown\",\n typeToFolder: Record<string, string>,\n schema: PmSettings[\"schema\"],\n): Promise<{ candidates: CachedDocumentCandidate[]; warnings: string[] }> {\n const warnings: string[] = [];\n const candidates = await listAllDocumentCandidatesCached(pmRoot, itemFormat, typeToFolder, warnings, schema);\n return {\n candidates,\n warnings,\n };\n}\n\nasync function hydrateDocuments(\n pmRoot: string,\n candidates: CachedDocumentCandidate[],\n schema: PmSettings[\"schema\"],\n warnings: string[],\n itemIds?: Set<string>,\n): Promise<ItemDocument[]> {\n const extensionFieldNames = collectRegisteredItemFieldNames(getActiveExtensionRegistrations());\n const hydrated: ItemDocument[] = [];\n for (const candidate of candidates) {\n if (itemIds && !itemIds.has(candidate.metadata.id)) {\n continue;\n }\n if (typeof candidate.body === \"string\") {\n hydrated.push({\n metadata: candidate.metadata,\n body: candidate.body,\n });\n continue;\n }\n try {\n const raw = await fs.readFile(candidate.item_path, \"utf8\");\n const parsed = parseItemDocument(raw, {\n format: candidate.item_format,\n schema,\n extensionFieldNames,\n onWarning: (warning) => warnings.push(warning),\n });\n hydrated.push({\n metadata: candidate.metadata,\n body: parsed.body,\n });\n } catch {\n warnings.push(`item_list_item_read_failed:${path.relative(pmRoot, candidate.item_path)}`);\n hydrated.push({\n metadata: candidate.metadata,\n body: \"\",\n });\n }\n }\n return hydrated;\n}\n\nfunction buildKeywordRecord(document: ItemDocument, mode: \"keyword\" \| \"semantic\" \| \"hybrid\"): Record<string, unknown> {\n const item = document.metadata;\n return {\n id: item.id,\n mode,\n updated_at: item.updated_at,\n corpus: buildSearchCorpus(document),\n };\n}\n\ntype ExtensionEmbedBatch = (context: {\n inputs: string[];\n settings: PmSettings;\n model: string;\n}) => Promise<number[][]> \| number[][];\n\ntype ExtensionEmbedOne = (context: {\n input: string;\n settings: PmSettings;\n model: string;\n}) => Promise<number[]> \| number[];\n\ntype ExtensionVectorUpsert = (context: {\n points: Array<{\n id: string;\n vector: number[];\n payload: Record<string, unknown>;\n }>;\n settings: PmSettings;\n}) => Promise<void> \| void;\n\ntype ExtensionVectorDelete = (context: {\n ids: string[];\n settings: PmSettings;\n}) => Promise<void> \| void;\n\ninterface ExtensionVectorAdapter {\n name: string;\n upsert: ExtensionVectorUpsert;\n delete?: ExtensionVectorDelete;\n}\n\ninterface ReindexEmbeddingExecutionResult {\n vectors: number[][];\n embeddingIdentity: VectorizationEmbeddingIdentity;\n}\n\nconst toOptionalNonEmptyString = toNonEmptyStringOrUndefined;\n\nfunction resolveExtensionSearchEmbedding(\n settings: PmSettings,\n): { name: string; embedBatch?: ExtensionEmbedBatch; embed?: ExtensionEmbedOne } \| null {\n const registrations = getActiveExtensionRegistrations();\n const providerName = toOptionalNonEmptyString(settings.search?.provider);\n const registration = resolveRegisteredSearchProvider(registrations, providerName);\n if (!registration) {\n return null;\n }\n const runtimeDefinition = registration.runtime_definition ?? registration.definition;\n const name =\n toOptionalNonEmptyString((runtimeDefinition as { name?: unknown }).name) ??\n toOptionalNonEmptyString((registration.definition as { name?: unknown }).name) ??\n providerName;\n if (!name) {\n return null;\n }\n const embedBatch = (runtimeDefinition as { embedBatch?: unknown; embed_batch?: unknown }).embedBatch;\n const embedBatchSnake = (runtimeDefinition as { embedBatch?: unknown; embed_batch?: unknown }).embed_batch;\n const embed = (runtimeDefinition as { embed?: unknown }).embed;\n const resolvedEmbedBatch =\n typeof embedBatch === \"function\"\n ? (embedBatch as ExtensionEmbedBatch)\n : typeof embedBatchSnake === \"function\"\n ? (embedBatchSnake as ExtensionEmbedBatch)\n : undefined;\n const resolvedEmbed = typeof embed === \"function\" ? (embed as ExtensionEmbedOne) : undefined;\n if (!resolvedEmbedBatch && !resolvedEmbed) {\n return null;\n }\n return {\n name,\n embedBatch: resolvedEmbedBatch,\n embed: resolvedEmbed,\n };\n}\n\nfunction resolveExtensionVectorAdapter(settings: PmSettings): ExtensionVectorAdapter \| null {\n const registrations = getActiveExtensionRegistrations();\n const adapterName = toOptionalNonEmptyString(settings.vector_store?.adapter);\n const registration = resolveRegisteredVectorStoreAdapter(registrations, adapterName);\n if (!registration) {\n return null;\n }\n const runtimeDefinition = registration.runtime_definition ?? registration.definition;\n const name =\n toOptionalNonEmptyString((runtimeDefinition as { name?: unknown }).name) ??\n toOptionalNonEmptyString((registration.definition as { name?: unknown }).name) ??\n adapterName;\n const upsert = (runtimeDefinition as { upsert?: unknown }).upsert;\n const deleteHandler = (runtimeDefinition as { delete?: unknown }).delete;\n if (!name \|\| typeof upsert !== \"function\") {\n return null;\n }\n return {\n name,\n upsert: upsert as ExtensionVectorUpsert,\n ...(typeof deleteHandler === \"function\" ? { delete: deleteHandler as ExtensionVectorDelete } : {}),\n };\n}\n\nfunction assertVector(value: unknown, context: string): number[] {\n if (!Array.isArray(value) \|\| value.some((entry) => typeof entry !== \"number\" \|\| !Number.isFinite(entry))) {\n throw new PmCliError(`Invalid vector returned by ${context}`, EXIT_CODE.GENERIC_FAILURE);\n }\n return value;\n}\n\nasync function executeExtensionEmbedding(\n extensionEmbedding: { name: string; embedBatch?: ExtensionEmbedBatch; embed?: ExtensionEmbedOne },\n settings: PmSettings,\n corpusInputs: string[],\n): Promise<number[][]> {\n const model = settings.search?.embedding_model?.trim() \|\| \"text-embedding-3-small\";\n if (extensionEmbedding.embedBatch) {\n const vectors = await Promise.resolve(\n extensionEmbedding.embedBatch({\n inputs: corpusInputs,\n settings,\n model,\n }),\n );\n if (!Array.isArray(vectors)) {\n throw new PmCliError(\n `Extension search provider \"${extensionEmbedding.name}\" embedBatch must return an array of vectors`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n return vectors.map((vector, index) =>\n assertVector(vector, `extension search provider \"${extensionEmbedding.name}\" embedBatch output at index ${index}`),\n );\n }\n if (!extensionEmbedding.embed) {\n throw new PmCliError(\n `Extension search provider \"${extensionEmbedding.name}\" does not implement embed/embedBatch`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n const vectors: number[][] = [];\n for (const [index, input] of corpusInputs.entries()) {\n const vector = await Promise.resolve(\n extensionEmbedding.embed({\n input,\n settings,\n model,\n }),\n );\n vectors.push(assertVector(vector, `extension search provider \"${extensionEmbedding.name}\" embed output at index ${index}`));\n }\n return vectors;\n}\n\nfunction resolveExtensionEmbeddingModel(settings: PmSettings): string {\n return settings.search?.embedding_model?.trim() \|\| \"text-embedding-3-small\";\n}\n\nfunction resolveReindexEmbeddingIdentity(\n settings: PmSettings,\n activeEmbeddingProvider: ReturnType<typeof resolveEmbeddingProviders>[\"active\"],\n extensionEmbedding: { name: string } \| null,\n): VectorizationEmbeddingIdentity {\n const identity = extensionEmbedding\n ? buildVectorizationEmbeddingIdentity(extensionEmbedding.name, resolveExtensionEmbeddingModel(settings))\n : activeEmbeddingProvider\n ? buildVectorizationEmbeddingIdentity(activeEmbeddingProvider.name, activeEmbeddingProvider.model)\n : null;\n if (!identity) {\n throw new PmCliError(\n `No embedding identity available for semantic reindex mode`,\n EXIT_CODE.USAGE,\n );\n }\n return identity;\n}\n\nfunction collectLedgerOrphanIds(ledgerEntries: Record<string, string>, currentIds: Set<string>): string[] {\n return Object.keys(ledgerEntries)\n .filter((id) => !currentIds.has(id))\n .sort((left, right) => left.localeCompare(right));\n}\n\nasync function executeReindexEmbedding(\n settings: PmSettings,\n requestedMode: \"keyword\" \| \"semantic\" \| \"hybrid\",\n activeEmbeddingProvider: ReturnType<typeof resolveEmbeddingProviders>[\"active\"],\n extensionEmbedding: { name: string; embedBatch?: ExtensionEmbedBatch; embed?: ExtensionEmbedOne } \| null,\n documents: ItemDocument[],\n semanticWarnings: string[],\n semanticSummary: ReindexResult[\"semantic\"],\n progressEnabled: boolean,\n): Promise<ReindexEmbeddingExecutionResult> {\n const semanticProviderName = extensionEmbedding?.name ?? activeEmbeddingProvider?.name;\n const corpusCharacterLimit = resolveSemanticCorpusCharacterLimit(\n semanticProviderName,\n settings.search.embedding_corpus_max_characters,\n ).maxCharacters;\n const corpusInputs = documents.map((document) =>\n buildSemanticCorpusInput(document, {\n providerName: semanticProviderName,\n maxCharacters: corpusCharacterLimit,\n }),\n );\n let vectors: number[][] = [];\n let embeddingIdentity: VectorizationEmbeddingIdentity \| null = null;\n if (extensionEmbedding) {\n try {\n vectors = await executeExtensionEmbedding(extensionEmbedding, settings, corpusInputs);\n embeddingIdentity = buildVectorizationEmbeddingIdentity(extensionEmbedding.name, resolveExtensionEmbeddingModel(settings));\n } catch (error: unknown) {\n if (!activeEmbeddingProvider) {\n throw new PmCliError(\n `Extension search provider \"${extensionEmbedding.name}\" failed to generate embeddings: ${error instanceof Error ? error.message : String(error)}`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n semanticWarnings.push(\n `Extension search provider \"${extensionEmbedding.name}\" failed; falling back to built-in provider (${error instanceof Error ? error.message : String(error)})`,\n );\n }\n }\n if (vectors.length === 0) {\n if (!activeEmbeddingProvider) {\n throw new PmCliError(\n `No embedding executor available for reindex mode '${requestedMode}'`,\n EXIT_CODE.USAGE,\n );\n }\n const embeddingResult = await executeEmbeddingBatchesWithRetry(activeEmbeddingProvider, settings, corpusInputs, {\n onProgress: (event) => {\n if (event.phase === \"complete\") {\n semanticSummary.batches_completed = event.batch_index;\n }\n emitReindexProgress(\n progressEnabled,\n `embedding_batch_${event.phase} batch=${event.batch_index}/${event.batch_total} size=${event.batch_size} completed_inputs=${event.completed_inputs}/${event.total_inputs}`,\n );\n },\n });\n semanticWarnings.push(...embeddingResult.warnings);\n vectors = embeddingResult.vectors;\n embeddingIdentity = buildVectorizationEmbeddingIdentity(activeEmbeddingProvider.name, activeEmbeddingProvider.model);\n }\n emitReindexProgress(progressEnabled, `embedding_complete vectors=${vectors.length}`);\n if (vectors.length !== documents.length) {\n throw new PmCliError(\n `Embedding output size mismatch (expected ${documents.length}, received ${vectors.length})`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n if (!embeddingIdentity) {\n throw new PmCliError(\n `No embedding identity available for reindex mode '${requestedMode}'`,\n EXIT_CODE.USAGE,\n );\n }\n return { vectors, embeddingIdentity };\n}\n\nasync function resetVectorStoreForReindex(\n activeVectorStore: ReturnType<typeof resolveVectorStores>[\"active\"],\n extensionVectorAdapter: ExtensionVectorAdapter \| null,\n ledgerEntries: Record<string, string>,\n settings: PmSettings,\n semanticWarnings: string[],\n vectorDimension?: number,\n): Promise<void> {\n const knownIds = Object.keys(ledgerEntries);\n if (extensionVectorAdapter) {\n if (knownIds.length > 0 && extensionVectorAdapter.delete) {\n try {\n await Promise.resolve(extensionVectorAdapter.delete({ ids: knownIds.sort((left, right) => left.localeCompare(right)), settings }));\n } catch (error: unknown) {\n throw new PmCliError(\n `Extension vector adapter \"${extensionVectorAdapter.name}\" failed to delete vectors during reindex reset: ${error instanceof Error ? error.message : String(error)}`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n } else if (knownIds.length > 0) {\n semanticWarnings.push(\n `search_semantic_reindex_reset_skipped:adapter=${extensionVectorAdapter.name}:known_ids=${knownIds.length}`,\n );\n }\n if (!activeVectorStore) {\n return;\n }\n }\n if (activeVectorStore) {\n await executeVectorReset(activeVectorStore, knownIds, {}, vectorDimension);\n }\n}\n\nasync function pruneReindexOrphanVectors(\n activeVectorStore: ReturnType<typeof resolveVectorStores>[\"active\"],\n extensionVectorAdapter: ExtensionVectorAdapter \| null,\n orphanIds: string[],\n settings: PmSettings,\n semanticWarnings: string[],\n): Promise<void> {\n if (orphanIds.length === 0) {\n return;\n }\n if (extensionVectorAdapter) {\n if (extensionVectorAdapter.delete) {\n try {\n await Promise.resolve(extensionVectorAdapter.delete({ ids: orphanIds, settings }));\n } catch (error: unknown) {\n throw new PmCliError(\n `Extension vector adapter \"${extensionVectorAdapter.name}\" failed to delete orphan vectors during reindex: ${error instanceof Error ? error.message : String(error)}`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n } else {\n semanticWarnings.push(\n `search_semantic_reindex_orphan_prune_skipped:adapter=${extensionVectorAdapter.name}:count=${orphanIds.length}`,\n );\n }\n if (!activeVectorStore) {\n return;\n }\n }\n if (activeVectorStore) {\n await executeVectorDelete(activeVectorStore, orphanIds);\n }\n}\n\nexport async function runReindex(options: ReindexOptions, global: GlobalOptions): Promise<ReindexResult> {\n const requestedMode = parseMode(options.mode);\n const progressEnabled = shouldEmitReindexProgress(options);\n emitReindexProgress(progressEnabled, `start mode=${requestedMode}`);\n const pmRoot = resolvePmRoot(process.cwd(), global.path);\n if (!(await pathExists(getSettingsPath(pmRoot)))) {\n throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);\n }\n\n const settings = resolveSettingsWithSemanticRuntimeDefaults(await readSettings(pmRoot)).settings;\n let releaseReindexLock: (() => Promise<void>) \| null = null;\n try {\n releaseReindexLock = await acquireLock(\n pmRoot,\n REINDEX_LOCK_ID,\n settings.locks.ttl_seconds,\n process.env.PM_AUTHOR ?? \"pm-reindex\",\n false,\n settings.governance.force_required_for_stale_lock,\n );\n } catch (error: unknown) {\n if (error instanceof PmCliError && error.exitCode === EXIT_CODE.CONFLICT) {\n throw new PmCliError(\n \"Another pm reindex run is already active for this project. Wait for it to finish before starting a new keyword, semantic, or hybrid reindex.\",\n EXIT_CODE.CONFLICT,\n {\n code: \"reindex_already_running\",\n type: \"urn:pm-cli:error:reindex_already_running\",\n why: \"Semantic reindex can be expensive and duplicate runs compete for the same local embedding model and vector store.\",\n nextSteps: [\n \"Check active pm reindex processes before starting another reindex.\",\n \"Rerun with --progress when you need non-interactive visibility.\",\n ],\n },\n );\n }\n throw error;\n }\n\n try {\n const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());\n const extensionEmbedding = resolveExtensionSearchEmbedding(settings);\n const extensionVectorAdapter = resolveExtensionVectorAdapter(settings);\n let activeEmbeddingProvider: ReturnType<typeof resolveEmbeddingProviders>[\"active\"] = null;\n let activeVectorStore: ReturnType<typeof resolveVectorStores>[\"active\"] = null;\n if (requestedMode !== \"keyword\") {\n const providerResolution = resolveEmbeddingProviders(settings);\n if (!providerResolution.active && !extensionEmbedding) {\n throw new PmCliError(\n `Reindex mode '${requestedMode}' requires a configured embedding provider in settings.providers.openai/settings.providers.ollama or an extension provider selected by settings.search.provider`,\n EXIT_CODE.USAGE,\n );\n }\n const vectorResolution = resolveVectorStores(settings);\n if (!vectorResolution.active && !extensionVectorAdapter) {\n throw new PmCliError(\n `Reindex mode '${requestedMode}' requires a configured vector store in settings.vector_store.qdrant/settings.vector_store.lancedb or an extension adapter selected by settings.vector_store.adapter`,\n EXIT_CODE.USAGE,\n );\n }\n activeEmbeddingProvider = providerResolution.active;\n activeVectorStore = vectorResolution.active;\n }\n const mode = requestedMode;\n emitReindexProgress(progressEnabled, \"loading item corpus\");\n const loadedCandidates = await loadDocumentCandidates(pmRoot, settings.item_format, typeRegistry.type_to_folder, settings.schema);\n const reindexWarnings = [...loadedCandidates.warnings];\n const documentCandidates = loadedCandidates.candidates;\n const metadataDocuments: ItemDocument[] = documentCandidates.map((candidate) => ({\n metadata: candidate.metadata,\n body: typeof candidate.body === \"string\" ? candidate.body : \"\",\n }));\n emitReindexProgress(progressEnabled, `loaded_items=${metadataDocuments.length}`);\n const generatedAt = nowIso();\n\n const manifest = {\n version: 1,\n mode,\n generated_at: generatedAt,\n total_items: metadataDocuments.length,\n items: metadataDocuments.map((document) => ({\n id: document.metadata.id,\n type: document.metadata.type,\n status: document.metadata.status,\n priority: document.metadata.priority,\n updated_at: document.metadata.updated_at,\n })),\n };\n\n const manifestPath = path.join(pmRoot, MANIFEST_PATH);\n const embeddingsPath = path.join(pmRoot, EMBEDDINGS_PATH);\n\n let documentsForKeywordArtifacts =\n mode === \"keyword\"\n ? await hydrateDocuments(pmRoot, documentCandidates, settings.schema, reindexWarnings)\n : metadataDocuments;\n const semanticWarnings: string[] = [];\n const vectorizationLedgerEntries: Record<string, string> = {};\n let vectorizationEmbeddingMetadata: VectorizationEmbeddingMetadata \| null = null;\n const semanticSummary = {\n enabled: mode !== \"keyword\",\n stale_items: 0,\n unchanged_items: 0,\n embedded_items: 0,\n vector_upserted: 0,\n batches_completed: 0,\n };\n if (mode !== \"keyword\" && metadataDocuments.length > 0) {\n const ledger = await readVectorizationStatusLedger(pmRoot);\n semanticWarnings.push(...ledger.warnings);\n const embeddingIdentity = resolveReindexEmbeddingIdentity(settings, activeEmbeddingProvider, extensionEmbedding);\n const currentIds = new Set(metadataDocuments.map((document) => document.metadata.id));\n const orphanIds = collectLedgerOrphanIds(ledger.entries, currentIds);\n let resetRequired = hasVectorizationEmbeddingIdentityChanged(ledger.embedding, embeddingIdentity);\n let staleIds = new Set(\n (resetRequired ? metadataDocuments : metadataDocuments.filter((document) => ledger.entries[document.metadata.id] !== document.metadata.updated_at))\n .map((document) => document.metadata.id),\n );\n let staleDocuments = staleIds.size > 0\n ? await hydrateDocuments(pmRoot, documentCandidates, settings.schema, reindexWarnings, staleIds)\n : [];\n let freshDocuments = metadataDocuments.length - staleDocuments.length;\n semanticSummary.stale_items = staleDocuments.length;\n semanticSummary.unchanged_items = freshDocuments;\n for (const document of metadataDocuments) {\n vectorizationLedgerEntries[document.metadata.id] = document.metadata.updated_at;\n }\n if (staleDocuments.length === 0) {\n emitReindexProgress(progressEnabled, `embedding_skipped unchanged_items=${freshDocuments}`);\n semanticWarnings.push(`search_semantic_reindex_skipped_unchanged:count=${freshDocuments}`);\n } else {\n emitReindexProgress(progressEnabled, `embedding_start items=${staleDocuments.length} unchanged_items=${freshDocuments}`);\n let embeddingResult = await executeReindexEmbedding(\n settings,\n requestedMode,\n activeEmbeddingProvider,\n extensionEmbedding,\n staleDocuments,\n semanticWarnings,\n semanticSummary,\n progressEnabled,\n );\n let vectors = embeddingResult.vectors;\n let actualEmbeddingIdentity = embeddingResult.embeddingIdentity;\n let vectorDimension = inferConsistentVectorDimension(vectors, \"Reindex embeddings\");\n if (\n !resetRequired &&\n (hasVectorizationEmbeddingIdentityChanged(ledger.embedding, actualEmbeddingIdentity) \|\|\n hasVectorizationVectorDimensionChanged(ledger.embedding, vectorDimension))\n ) {\n resetRequired = true;\n staleIds = new Set(metadataDocuments.map((document) => document.metadata.id));\n staleDocuments = await hydrateDocuments(pmRoot, documentCandidates, settings.schema, reindexWarnings, staleIds);\n freshDocuments = 0;\n semanticSummary.stale_items = staleDocuments.length;\n semanticSummary.unchanged_items = 0;\n emitReindexProgress(progressEnabled, `embedding_dimension_changed reset_items=${staleDocuments.length}`);\n embeddingResult = await executeReindexEmbedding(\n settings,\n requestedMode,\n activeEmbeddingProvider,\n extensionEmbedding,\n staleDocuments,\n semanticWarnings,\n semanticSummary,\n progressEnabled,\n );\n vectors = embeddingResult.vectors;\n actualEmbeddingIdentity = embeddingResult.embeddingIdentity;\n vectorDimension = inferConsistentVectorDimension(vectors, \"Reindex embeddings\");\n }\n if (resetRequired) {\n emitReindexProgress(progressEnabled, \"vector_reset_start\");\n await resetVectorStoreForReindex(\n activeVectorStore,\n extensionVectorAdapter,\n ledger.entries,\n settings,\n semanticWarnings,\n ledger.embedding ? vectorDimension : undefined,\n );\n emitReindexProgress(progressEnabled, \"vector_reset_complete\");\n } else {\n await pruneReindexOrphanVectors(activeVectorStore, extensionVectorAdapter, orphanIds, settings, semanticWarnings);\n }\n vectorizationEmbeddingMetadata = buildVectorizationEmbeddingMetadata(actualEmbeddingIdentity, vectorDimension);\n const points = staleDocuments.map((document, index) => ({\n id: document.metadata.id,\n vector: assertVector(vectors[index], `reindex embeddings output at index ${index}`),\n payload: {\n id: document.metadata.id,\n type: document.metadata.type,\n status: document.metadata.status,\n priority: document.metadata.priority,\n updated_at: document.metadata.updated_at,\n },\n }));\n semanticSummary.embedded_items = vectors.length;\n if (extensionVectorAdapter) {\n try {\n emitReindexProgress(progressEnabled, `vector_upsert_start adapter=${extensionVectorAdapter.name} points=${points.length}`);\n await Promise.resolve(\n extensionVectorAdapter.upsert({\n points,\n settings,\n }),\n );\n semanticSummary.vector_upserted = points.length;\n emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${extensionVectorAdapter.name}`);\n } catch (error: unknown) {\n if (!activeVectorStore) {\n throw new PmCliError(\n `Extension vector adapter \"${extensionVectorAdapter.name}\" failed to upsert vectors: ${error instanceof Error ? error.message : String(error)}`,\n EXIT_CODE.GENERIC_FAILURE,\n );\n }\n semanticWarnings.push(\n `Extension vector adapter \"${extensionVectorAdapter.name}\" failed; falling back to built-in vector store (${error instanceof Error ? error.message : String(error)})`,\n );\n emitReindexProgress(progressEnabled, \"vector_upsert_fallback built_in_store\");\n await executeVectorUpsert(activeVectorStore, points);\n semanticSummary.vector_upserted = points.length;\n emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${activeVectorStore.name}`);\n }\n } else if (activeVectorStore) {\n emitReindexProgress(progressEnabled, `vector_upsert_start adapter=${activeVectorStore.name} points=${points.length}`);\n await executeVectorUpsert(activeVectorStore, points);\n semanticSummary.vector_upserted = points.length;\n emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${activeVectorStore.name}`);\n } else {\n throw new PmCliError(\n `No vector upsert executor available for reindex mode '${requestedMode}'`,\n EXIT_CODE.USAGE,\n );\n }\n if (freshDocuments > 0) {\n semanticWarnings.push(`search_semantic_reindex_skipped_unchanged:count=${freshDocuments}`);\n }\n const staleDocumentsById = new Map(staleDocuments.map((document) => [document.metadata.id, document]));\n documentsForKeywordArtifacts = metadataDocuments.map(\n (document) => staleDocumentsById.get(document.metadata.id) ?? document,\n );\n }\n if (staleDocuments.length === 0) {\n await pruneReindexOrphanVectors(activeVectorStore, extensionVectorAdapter, orphanIds, settings, semanticWarnings);\n vectorizationEmbeddingMetadata = ledger.embedding;\n }\n }\n const embeddingsLines = documentsForKeywordArtifacts.map((document) => JSON.stringify(buildKeywordRecord(document, mode))).join(\"\\n\");\n emitReindexProgress(progressEnabled, \"writing keyword artifacts\");\n await writeFileAtomic(manifestPath, `${JSON.stringify(manifest, null, 2)}\\n`);\n await writeFileAtomic(embeddingsPath, `${embeddingsLines}\\n`);\n const vectorizationWarnings: string[] = [];\n if (mode !== \"keyword\") {\n try {\n emitReindexProgress(progressEnabled, \"writing vectorization status ledger\");\n await writeVectorizationStatusLedger(pmRoot, vectorizationLedgerEntries, vectorizationEmbeddingMetadata);\n } catch (error: unknown) {\n vectorizationWarnings.push(\n `search_vectorization_status_ledger_write_failed:${error instanceof Error ? error.message : String(error)}`,\n );\n }\n }\n const hookWarnings = [\n ...(await runActiveOnWriteHooks({\n path: manifestPath,\n scope: \"project\",\n op: \"reindex:manifest\",\n })),\n ...(await runActiveOnWriteHooks({\n path: embeddingsPath,\n scope: \"project\",\n op: \"reindex:embeddings\",\n })),\n ...(await runActiveOnIndexHooks({\n mode,\n total_items: metadataDocuments.length,\n })),\n ];\n emitReindexProgress(progressEnabled, \"done\");\n\n return {\n ok: true,\n mode,\n total_items: metadataDocuments.length,\n semantic: semanticSummary,\n artifacts: {\n manifest: MANIFEST_PATH,\n embeddings: EMBEDDINGS_PATH,\n },\n warnings: [...reindexWarnings, ...semanticWarnings, ...vectorizationWarnings, ...hookWarnings],\n generated_at: generatedAt,\n };\n } finally {\n await releaseReindexLock?.();\n 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package/dist/cli/commands/search.d.ts CHANGED Viewed

@@ -2,6 +2,7 @@ import type { GlobalOptions } from "../../core/shared/command-types.js";
 import type { ItemFrontMatter } from "../../types/index.js";
 export interface SearchOptions {
     mode?: string;
+    semanticWeight?: string | number;
     includeLinked?: boolean;
     titleExact?: boolean;
     phraseExact?: boolean;