@unbrained/pm-cli 2026.6.10 → 2026.6.12

package/docs/AGENT_GUIDE.md

@@ -75,6 +75,7 @@ pm append <item-id> --body "Implementation notes..."
 
 ```bash
 pm files <item-id> --add path=src/app.ts,note="entrypoint"
+pm files <item-id> --add src/app.ts --note "entrypoint"
 pm docs <item-id> --add path=docs/COMMANDS.md,note="public docs"
 pm test <item-id> --add command="node scripts/run-tests.mjs test -- tests/unit/app.spec.ts",timeout_seconds=240
 ```
@@ -118,6 +119,7 @@ pm release <item-id>
 | Register custom status | `pm schema add-status <id> --role <active\|terminal\|...> --alias <name> --order <n>` |
 | Remove custom status | `pm schema remove-status <id>` (warns if items use it; built-in statuses refused) |
 | Agent plan create | `pm plan create --title "<scope>" --harness claude-code --scope "<short>" --claim` |
+| Agent plan create with steps | `pm plan create --title "<scope>" --step "<step 1>" --step "<step 2>" --step "<step 3>"` (repeated `--step` seeds ordered steps) |
 | Agent plan step update | `pm plan update-step <plan-id> plan-step-001 --step-status in_progress --step-evidence "<short>"` |
 | Agent plan read | `pm plan show <plan-id> --depth brief` (or `--fields id,title,steps_summary`) |
 | Materialize plan steps | `pm plan materialize <plan-id> --steps plan-step-002 --materialize-type Task` |
@@ -133,7 +135,7 @@ Default TOON output is preferred for model-readable loops. Use `--json` only whe
 
 `list`/`search` compact mode is intentionally token-light: it returns compact items plus only active filters (and runtime schema filters when present), omitting default projection/sorting/now trailer metadata.
 
-Over MCP the mutation tools (`pm_create`/`pm_update`/`pm_close`, and `pm_run` for `append`/`update-many`) are already compact by default: they return `changed_field_count` instead of the full `changed_fields` array. Pass `fullChangedFields=true` only when you need the explicit field-level delta, or `idOnly=true` for single-item id/status output.
+Over MCP the mutation tools (`pm_create`/`pm_update`/`pm_append`/`pm_close`, and `pm_run` for `update-many`) are already compact by default: they return `changed_field_count` instead of the full `changed_fields` array. Pass `fullChangedFields=true` only when you need the explicit field-level delta, or `idOnly=true` for single-item id/status output.
 
 `pm create --parent <id>` fails fast when the parent cannot be found. Use `--allow-missing-parent` only for deliberate imports or staged backlog reconstruction.
 
@@ -180,7 +182,10 @@ Use these defaults unless the task requires otherwise:
 
 When gating on `pm health` / `pm validate`, read the executable fix command from the output instead of hardcoding a warning-code-to-command mapping:
 
-- `pm health --json` per-check `details.remediation_map` maps each warning-code prefix to a `pm` fix command (for example `{ "history_drift_missing_stream": "pm history-repair <id>" }`). It is present in default/`--full` output and omitted in `--brief`/`--summary`.
+- `pm health --json` per-check `details.remediation_map` maps each warning-code prefix to a `pm` fix command (for example `{ "history_drift_missing_stream": "pm history-repair <id>" }`). It is present in default/`--full` output and omitted in `--brief`/`--summary`. With more than one drifted stream the history_drift commands point at `pm history-repair --all` (one audited bulk pass) instead of the per-item template.
+- `pm health` includes a read-only `locks` check (stale/unreadable/unparseable lock counts using the same classification `pm gc --scope locks` acts on); `locks_stale_count:<n>` remediates via `pm gc --scope locks`, `locks_unreadable:<n>` via `pm gc --scope locks --dry-run`.
 - `pm validate --fix-hints` (read-only) adds `details.fix_hints[]` to each failing check — a uniform list of executable `pm` commands for that check's findings.
+- `pm validate --auto-fix` applies the safe, deterministic subset of those fixes itself (resolution/close_reason backfills derived from the item's own fields) and reports every action in `fixes.planned_fixes[]` / `applied_fixes[]` (item id + field + equivalent `pm` command). Preview with `--dry-run`. Structural lifecycle fixes (reparent an active child off a terminal parent, or clear the parent link) are gated behind an explicit `--fix-scope lifecycle`; they appear in `planned_fixes[]`/`gated_fixes[]` until granted. `--fix-scope` is an exact allowlist (default: `metadata`, `resolution`), so `--fix-scope lifecycle` applies only lifecycle fixes. Auto-fix never closes or deletes items.
+- `pm validate --prune-missing` removes stale linked-file/doc LINKS whose paths classify as `deleted` (no same-basename candidate left in the workspace scan); `moved` paths keep their relink candidate in `details.missing_linked_path_classifications` instead of being pruned. Honors `--dry-run`; never touches real files.
 
 Both draw from the same remediation registry, so an agent can substitute the concrete `<id>` and run the command to auto-repair findings. Extension health checks expose their remediation under `details.triage.remediation` instead. See [Command Reference](COMMANDS.md#self-repair-remediation).

package/docs/CLAUDE_CODE_PLUGIN.md

@@ -65,7 +65,7 @@ This clones the repo, reads `.claude-plugin/marketplace.json` at the root, insta
 claude mcp add --transport stdio pm-mcp -- npx -y --package=@unbrained/pm-cli@latest pm-mcp
 ```
 
-Gives you the 22 MCP tools without skills or slash commands.
+Gives you the 25 MCP tools without skills or slash commands.
 
 ### 3. Direct project `.mcp.json` (project-scoped MCP only)
 
@@ -123,7 +123,7 @@ node scripts/smoke-claude-plugin.mjs
 pnpm smoke:claude-plugin
 ```
 
-Verifies: plugin file structure, manifest name consistency, MCP initialize, 22 tools present, full workflow (init → create → claim → update → link files/docs/tests → get → context → search → validate → health), and session-start hook.
+Verifies: plugin file structure, manifest name consistency, MCP initialize, 25 tools present, full workflow (init → create → claim → update → link files/docs/tests → get → context → search → validate → health), and session-start hook.
 
 ### MCP server smoke test
 

package/docs/COMMANDS.md

@@ -269,17 +269,20 @@ Use comments for progress and evidence, notes for implementation context, and le
 
 ```bash
 pm files <id> --add path=src/cli/main.ts,note="command wiring"
+pm files <id> --add src/cli/main.ts --note "command wiring"
 pm files <id> --add-glob "src/cli/**/*.ts"
 pm docs <id> --add path=docs/COMMANDS.md,note="public command docs"
+pm docs <id> --add docs/COMMANDS.md --note "public command docs"
 pm deps <id> --format tree
 ```
 
-Linked files and docs keep reviews reproducible. `deps` is read-only and projects item relationships.
+Linked files and docs keep reviews reproducible. `deps` is read-only and projects item relationships. The standalone `--note <text>` flag annotates every link added by `--add`/`--add-glob` in the same invocation (a per-entry embedded `note=` wins); `--note` without an add is a usage error.
 
 ## Linked Tests
 
 ```bash
 pm test <id> --add command="node scripts/run-tests.mjs test -- tests/unit/output.spec.ts",timeout_seconds=240
+pm test <id> --add command "node scripts/run-tests.mjs test -- tests/unit/output.spec.ts"
 pm test <id> --add-json '{"command":"node scripts/run-tests.mjs test -- tests/unit/output.spec.ts","timeout_seconds":240}'
 pm test <id> --run --progress
 pm test <id> --run --match output
@@ -288,7 +291,7 @@ pm test <id> --run --only-last
 pm test-all --status in_progress --progress
 ```
 
-Linked test commands should be sandbox-safe. Prefer `node scripts/run-tests.mjs ...` because it sets temporary `PM_PATH` and `PM_GLOBAL_PATH`. Use `--add-json` when command strings contain commas, nested quotes, shell variables, or `--` separators that are awkward to preserve through CSV-style `--add` parsing. `--match`, `--only-index`, and `--only-last` select which linked tests execute without mutating the stored linked-test list.
+Linked test commands should be sandbox-safe. Prefer `node scripts/run-tests.mjs ...` because it sets temporary `PM_PATH` and `PM_GLOBAL_PATH`. The two-token form `--add command "npm test -- parser"` (and `--add path "..."` / `--remove command "..."`) is accepted when the value is quoted into a single shell argument; it is normalized to `--add command=...` before parsing. Use `--add-json` when command strings contain commas, nested quotes, shell variables, or `--` separators that are awkward to preserve through CSV-style `--add` parsing. `--match`, `--only-index`, and `--only-last` select which linked tests execute without mutating the stored linked-test list.
 
 Strict linked-test guards:
 
@@ -336,6 +339,9 @@ For `--include events` without explicit `--to`, `--recurrence-lookahead-days`, o
 pm validate --check-resolution --check-history-drift
 pm validate --check-files --scan-mode tracked-all
 pm validate --check-resolution --fix-hints --json
+pm validate --auto-fix --dry-run --json
+pm validate --auto-fix --fix-scope lifecycle
+pm validate --prune-missing --dry-run --json
 pm normalize --dry-run --json
 pm gc --dry-run
 pm gc --scope locks --dry-run
@@ -347,6 +353,12 @@ Use dry-run modes before broad lifecycle or cleanup changes.
 
 `--fix-hints` is a read-only flag: each failing check gains `details.fix_hints`, an array of `pm` command templates derived from the warning codes it raised (for example `pm history-repair <id>` for history drift, or `pm update <id> --reviewer "<name>"` for a missing reviewer). Generic hints may contain `<id>`/`<field>`/`<path>` placeholders the agent substitutes from the check's detail rows; the resolution check aliases concrete per-row commands and marks `fix_hints_truncated` when the list is summarized. It never mutates items. The mapping comes from the shared remediation registry that also backs `pm health --json` (see Self-Repair Remediation below), so agents gating on `pm validate` can auto-repair findings without hardcoding warning-code-to-command lookups.
 
+`pm validate --check-metadata` also groups missing-required-field counts per item type in `details.missing_by_type` (for example `{ "Task": { "close_reason": 3 } }`) — counts only, zero-suppressed, and limited to the active metadata profile's required fields, so remediation can be targeted by type without verbose row dumps.
+
+`--auto-fix` applies the safe, deterministic subset of those remediations automatically and reports the result under a top-level `fixes` object (`planned_fixes[]`, `applied_fixes[]`, `gated_fixes[]`, `failed_fixes[]` — each row lists the item id, check, field, and the equivalent standalone `pm` command). Safe means derivable and non-destructive: a closed item missing `resolution` is backfilled from its own `close_reason` (or the `"completed"` default), and a closed item missing `close_reason` is backfilled from its existing `resolution`. Auto-fix NEVER closes, cancels, or deletes items, and every applied fix runs through the normal audited `pm update` path. Structural lifecycle fixes — an active item whose parent is terminal gets reparented to its active grandparent or has its parent link cleared — are always *planned* but only *applied* when the explicit `--fix-scope lifecycle` grant is passed. `--fix-scope` is an exact allowlist of what `--auto-fix` may mutate (`metadata`, `resolution`, `lifecycle`; comma-separated or repeatable) — `--fix-scope lifecycle` alone applies *only* lifecycle fixes; omitting the flag grants the safe field-backfill scopes (`metadata`, `resolution`) and never lifecycle. `--dry-run` previews the full plan without mutating anything. With `--auto-fix` and no explicit `--check-*` flags, only the fix-capable checks (metadata, resolution, lifecycle) run. The `checks` in the output always describe the pre-fix state; re-run `pm validate` to confirm convergence.
+
+`pm validate --check-files` classifies every stale linked path in `details.missing_linked_path_classifications` as either `moved` (a file with the same basename still exists in the scan — the row carries the top relink candidate, e.g. `old/path.md:moved:new/path.md`) or `deleted` (no candidate anywhere, e.g. `old/path.md:deleted`). `--prune-missing` bulk-removes the stale links classified `deleted` from their items (link removal only — real files are never touched; `moved` links are kept so their relink candidates are not lost) and reports each removal in `fixes.applied_fixes[]` as the equivalent `pm files <id> --remove <path>` / `pm docs <id> --remove <path>` command. It honors `--dry-run` and implies `--check-files`.
+
 ### Telemetry Local Analytics
 
 `pm telemetry` surfaces local queue/runtime telemetry state without running full health checks:
@@ -375,10 +387,16 @@ pm telemetry local-analytics status
 "remediation_map": { "history_drift_missing_stream": "pm history-repair <id>" }
 // vectorization check
 "remediation_map": { "vectorization_stale_items_remaining": "pm health --refresh-vectors" }
+// locks check
+"remediation_map": { "locks_stale_count": "pm gc --scope locks" }
 ```
 
+When more than one history stream is drifted, the `history_drift` remediation commands are rewritten to `pm history-repair --all` so the whole tree is repaired in one audited pass instead of one command per stream.
+
 `remediation_map` appears in default and `--full` output and is omitted in `--brief`/`--summary` to stay token-efficient. Extension checks keep their existing richer `details.triage.remediation` instead.
 
+`pm health` also runs a read-only `locks` check alongside the storage check: it classifies every file in `locks/` with the exact policy `pm gc --scope locks` acts on and reports `active_lock_count`, `stale_lock_count`, `unreadable_lock_count`, and `unparseable_lock_count` (counts appear in all projection modes; nothing is ever removed). It warns with `locks_stale_count:<n>` when stale locks exist (fix: `pm gc --scope locks`) and `locks_unreadable:<n>` when lock files cannot be read (inspect first: `pm gc --scope locks --dry-run`).
+
 ## History and Recovery
 
 ```bash
@@ -393,6 +411,8 @@ pm history-redact <id> --literal "[redacted_path_prefix]/private" --replacement
 pm history-redact <id> --regex "/192\\.168\\.[0-9.]+/g" --dry-run
 pm history-repair <id> --dry-run
 pm history-repair <id> --message "re-anchor legacy drift"
+pm history-repair --all --dry-run
+pm history-repair --all --message "bulk re-anchor drifted streams"
 pm activity --id <id> --limit 50
 pm activity --full --id <id> --limit 50
 pm restore <id> <timestamp-or-version>
@@ -411,6 +431,7 @@ pm stats --storage --json
 `history-redact` rewrites matching history payloads deterministically, recomputes hash chains, and appends an auditable `history_redact` marker entry when changes are applied.
 `history-compact` rewrites long streams into a synthetic checkpoint baseline plus a retained tail (`--before` accepts a 1-based version or ISO timestamp), re-anchors hashes, verifies integrity, and appends an auditable `history_compact` marker when applied.
 `history-repair` re-anchors a drifted history chain when `pm health`/`pm validate --check-history-drift` report stale hashes: it replays the stream, recomputes every before/after hash, repairs legacy patch ops that no longer strictly apply, reconciles the latest hash with the on-disk item, and appends an auditable `history_repair` marker. It never modifies item content and is a safe no-op on a clean stream.
+`history-repair --all` (mutually exclusive with `<id>`) runs the same drift scan `pm health` uses and applies the audited single-stream repair (ownership check, lock, post-repair no-drift verification, `--message` audit marker, per-stream `--force`) to every drifted stream in one pass. One failing stream never aborts the rest: the result lists one compact row per drifted stream (`repaired` / `skipped_clean` / `failed`) plus `totals`, and the command exits non-zero only if any stream failed.
 
 ## Custom Item Types
 
@@ -455,6 +476,7 @@ The option composes with `--defaults`, `--preset`, `--author`, `--agent-guidance
 
 ```bash
 pm plan create --title "Refactor lock retry" --scope "Improve retry semantics" --harness claude-code --parent pm-epic1 --related pm-rel1,pm-rel2 --claim
+pm plan create --title "Fix flaky retry test" --step "Read lock.ts" --step "Write the fix" --step "Run the tests"
 pm plan add-step <plan-id> --step-title "Read lock.ts" --step-body "Inspect retry path" --depends-on pm-task1
 pm plan update-step <plan-id> plan-step-001 --step-status in_progress --step-evidence "started reading lock.ts"
 pm plan complete-step <plan-id> plan-step-001 --step-evidence "lock.ts read; retry path captured"
@@ -496,6 +518,7 @@ Invariants:
 
 - Exactly one step is `in_progress` per Plan; pass `--allow-multiple-active` for explicit parallel branches.
 - Blocking a step requires `--step-blocked-reason` (or an already-recorded reason).
+- `create` accepts repeated `--step <title>` flags to seed ordered steps in argv order (values are never comma-split). When `--step-title` is also given it becomes the first step. Per-step detail flags (`--step-body`, `--step-status`, `--file`, ...) apply to a single initial step only; combining them with multiple `--step` values is a usage error — create the plan first, then refine steps with `add-step`/`update-step`. On step subcommands a single `--step` value still aliases `--step-title`.
 - `materialize` adds `discovered_from` + `parent` to each new item and an `implements` link back on the source step plus a `child` dependency on the Plan.
 - Search keyword corpus includes plan_scope, step titles/bodies, decisions, discoveries, validation, and step linked items.
 

package/marketplace.json

@@ -12,7 +12,7 @@
     {
       "name": "pm-claude",
       "source": "./plugins/pm-claude",
-      "description": "Native pm CLI integration for Claude Code — 22 MCP tools, 5 workflow skills, 14 slash commands, 4 subagents, hybrid TUI task tracking, session context injection, and coordination subagents for git-based project management without leaving Claude Code.",
+      "description": "Native pm CLI integration for Claude Code — 25 MCP tools, 5 workflow skills, 14 slash commands, 4 subagents, hybrid TUI task tracking, session context injection, and coordination subagents for git-based project management without leaving Claude Code.",
       "version": "1.4.0",
       "author": {
         "name": "unbrained",

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@unbrained/pm-cli",
-  "version": "2026.6.10",
+  "version": "2026.6.12",
   "description": "Git-native project management CLI for humans and agents.",
   "type": "module",
   "author": "unbrained",

package/plugins/pm-claude/.claude-plugin/plugin.json

@@ -1,6 +1,6 @@
 {
   "name": "pm-claude",
-  "description": "Native pm CLI integration for Claude Code — 22 MCP tools, 5 workflow skills, 14 slash commands, 4 subagents (coordinator, delivery-chain, triage, verification), hybrid TUI task tracking (pm as persistent store + Claude Code task panel as live view), session context injection, and full git-based project management without leaving Claude Code.",
+  "description": "Native pm CLI integration for Claude Code — 25 MCP tools, 5 workflow skills, 14 slash commands, 4 subagents (coordinator, delivery-chain, triage, verification), hybrid TUI task tracking (pm as persistent store + Claude Code task panel as live view), session context injection, and full git-based project management without leaving Claude Code.",
   "version": "1.4.0",
   "author": {
     "name": "unbrained",

package/plugins/pm-claude/README.md

@@ -6,7 +6,7 @@ Native pm CLI integration for Claude Code. Use pm project management tools direc
 
 | Component | What it provides |
 |-----------|----------------|
-| **22 MCP tools** | Full pm surface: context, search, list, get, create, copy, update, claim, release, close, comments, files, docs, notes, learnings, deps, test, validate, health, contracts, plan + `pm_run` for everything else |
+| **25 MCP tools** | Full pm surface: context, search, list, get, create, copy, update, claim, release, close, comments, files, docs, notes, learnings, deps, test, validate, health, contracts, plan, append, schema, config + `pm_run` for everything else |
 | **5 skills** | `pm-workflow`, `pm-developer`, `pm-release`, `pm-audit`, `pm-planner` — auto-loaded as Claude Code skills |
 | **14 slash commands** | Full lifecycle coverage — status, start, close, triage, audit, search, new, list, calendar, developer, planner, release, workflow, init |
 | **4 subagents** | `pm-coordinator` (batch/multi-item), `pm-triage-agent` (duplicate-safe item creation), `pm-verification-agent` (evidence + close readiness), and `pm-delivery-chain` (orchestrated delivery) |
@@ -29,7 +29,7 @@ claude plugin marketplace add /path/to/pm-cli
 # claude plugin marketplace add unbraind/pm-cli
 ```
 
-This installs all 22 MCP tools, 5 skills, 14 slash commands, 4 subagents, hybrid TUI tracking, and the session hook in one step.
+This installs all 25 MCP tools, 5 skills, 14 slash commands, 4 subagents, hybrid TUI tracking, and the session hook in one step.
 
 ### Option B: Legacy marketplace alias (also works)
 
@@ -45,7 +45,7 @@ Both `pm` and `pm-cli` marketplace IDs resolve to the same plugin.
 claude mcp add --transport stdio pm-mcp -- npx -y --package=@unbrained/pm-cli@latest pm-mcp
 ```
 
-This gives you the 22 MCP tools but not the skills, slash commands, or session hook.
+This gives you the 25 MCP tools but not the skills, slash commands, or session hook.
 
 ### Option D: Direct `.mcp.json` (project-scoped MCP only)
 
@@ -152,7 +152,9 @@ Spawn pm-triage-agent to set up the pm item for: add OAuth2 login support
 | `pm_list` | Filtered item list |
 | `pm_get` | Single item detail |
 | `pm_create` | Create new item |
+| `pm_copy` | Copy item into a new id |
 | `pm_update` | Update metadata |
+| `pm_append` | Append text to item body |
 | `pm_claim` | Claim for active work |
 | `pm_release` | Release claim |
 | `pm_close` | Close with reason |
@@ -166,6 +168,8 @@ Spawn pm-triage-agent to set up the pm item for: add OAuth2 login support
 | `pm_validate` | Run validation checks |
 | `pm_health` | Run health diagnostics |
 | `pm_contracts` | Inspect command contracts |
+| `pm_schema` | Manage custom item types/statuses |
+| `pm_config` | Read or write settings keys |
 | `pm_plan` | Manage durable Plan workflows |
 
 ### General tool

package/plugins/pm-claude/commands/pm-init.md

@@ -47,7 +47,7 @@ Initialize pm project tracking using native MCP tools. Argument: `$ARGUMENTS` (o
    - pm initialized at `.agents/pm/`
    - guidance mode defaults to `ask` (TTY prompt only); use `agentGuidance=add|skip|status` in `pm_run` options for deterministic behavior
    - Available slash commands: `/pm-status`, `/pm-new`, `/pm-start-task`, `/pm-close-task`, `/pm-list`, `/pm-search`, `/pm-triage`, `/pm-calendar`, `/pm-developer`, `/pm-planner`, `/pm-release`, `/pm-audit`, `/pm-workflow`
-   - All 22 MCP tools available: `pm_context`, `pm_search`, `pm_list`, `pm_get`, `pm_create`, `pm_copy`, `pm_update`, `pm_claim`, `pm_release`, `pm_close`, `pm_comments`, `pm_files`, `pm_docs`, `pm_notes`, `pm_learnings`, `pm_deps`, `pm_test`, `pm_validate`, `pm_health`, `pm_contracts`, `pm_plan`, `pm_run`
+   - All 25 MCP tools available: `pm_context`, `pm_search`, `pm_list`, `pm_get`, `pm_create`, `pm_copy`, `pm_update`, `pm_append`, `pm_claim`, `pm_release`, `pm_close`, `pm_comments`, `pm_files`, `pm_docs`, `pm_notes`, `pm_learnings`, `pm_deps`, `pm_test`, `pm_validate`, `pm_health`, `pm_contracts`, `pm_schema`, `pm_config`, `pm_plan`, `pm_run`
    - Next: use `/pm-new <title>` to create your first item, or `/pm-status` to see the tracker state
 
 If initialization fails, report the error and suggest running `pm init` manually in the terminal.

package/plugins/pm-codex/README.md

@@ -21,9 +21,9 @@ For a published package install, keep `@unbrained/pm-cli` available through npm.
 
 ## Native Tools
 
-Prefer the narrow tools when they match the task: `pm_context`, `pm_search`, `pm_list`, `pm_get`, `pm_create`, `pm_update`, `pm_claim`, `pm_release`, `pm_close`, `pm_comments`, `pm_files`, `pm_docs`, `pm_test`, `pm_validate`, `pm_health`, `pm_contracts`, and `pm_plan`.
+Prefer the narrow tools when they match the task: `pm_context`, `pm_search`, `pm_list`, `pm_get`, `pm_create`, `pm_copy`, `pm_update`, `pm_append`, `pm_claim`, `pm_release`, `pm_close`, `pm_comments`, `pm_files`, `pm_docs`, `pm_notes`, `pm_learnings`, `pm_deps`, `pm_test`, `pm_validate`, `pm_health`, `pm_contracts`, `pm_schema`, `pm_config`, and `pm_plan`.
 
-Use `pm_run` for the remaining pm surface. Supported actions include `init`, `calendar`, `activity`, `aggregate`, `dedupe-audit`, `normalize`, `reindex`, `extension`, `history`, `history-redact`, `plan`, `stats`, `append`, `notes`, `learnings`, `test-all`, `comments-audit`, `gc`, templates, and test-runs controls.
+Use `pm_run` for the remaining pm surface. Supported actions include `init`, `calendar`, `activity`, `aggregate`, `dedupe-audit`, `normalize`, `reindex`, `extension`, `history`, `history-redact`, `stats`, `test-all`, `comments-audit`, `gc`, templates, and test-runs controls.
 
 `pm_plan` exposes Codex-style ExecPlans as a first-class `Plan` item type with ordered steps, evidence, decisions, discoveries, validation, and materialization. See the `pm-native` skill for the full Plan workflow recipe.
 For `init` automation, pass `options.agentGuidance` (`ask|add|skip|status`) when you need deterministic AGENTS/CLAUDE guidance behavior in non-interactive runs.

package/dist/cli-bundle/chunks/activity-5QLX6DHN.js

@@ -1,16 +0,0 @@
-import {
-  runActivity
-} from "./chunk-D6JZBUZ6.js";
-import "./chunk-WBU257Z4.js";
-import "./chunk-TXWMLDMG.js";
-import "./chunk-TV6FZGVK.js";
-import "./chunk-XRE4CTNP.js";
-import "./chunk-I2FM2SMO.js";
-import "./chunk-Q6PSD5DZ.js";
-import "./chunk-7GYMMDDW.js";
-import "./chunk-7TW64BS5.js";
-import "./chunk-OQGJSCZZ.js";
-export {
-  runActivity
-};
-//# sourceMappingURL=activity-5QLX6DHN.js.map

package/dist/cli-bundle/chunks/chunk-DTRIVUTN.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../../../../../../../../cli/commands/linked-artifacts.ts"],"sourcesContent":["import fs from \"node:fs/promises\";\nimport path from \"node:path\";\nimport fg from \"fast-glob\";\nimport { pathExists } from \"../../core/fs/fs-utils.js\";\nimport { getActiveExtensionRegistrations } from \"../../core/extensions/index.js\";\nimport { createStdinTokenResolver, parseCsvKv } from \"../../core/item/parse.js\";\nimport { resolveItemTypeRegistry } from \"../../core/item/type-registry.js\";\nimport { EXIT_CODE } from \"../../core/shared/constants.js\";\nimport type { GlobalOptions } from \"../../core/shared/command-types.js\";\nimport { PmCliError } from \"../../core/shared/errors.js\";\nimport { listAllFrontMatter, locateItem, mutateItem, readLocatedItem } from \"../../core/store/item-store.js\";\nimport { getSettingsPath, resolvePmRoot } from \"../../core/store/paths.js\";\nimport { readSettings } from \"../../core/store/settings.js\";\nimport { SCOPE_VALUES } from \"../../types/index.js\";\nimport { resolveAuthor } from \"../../core/shared/author.js\";\nimport type { LinkScope } from \"../../types/index.js\";\n\nexport type LinkedArtifact = {\n  path: string;\n  scope: LinkScope;\n  note?: string;\n};\n\nexport interface LinkedArtifactCommandOptions {\n  add?: string[];\n  addGlob?: string[];\n  remove?: string[];\n  migrate?: string[];\n  list?: boolean;\n  appendStable?: boolean;\n  validatePaths?: boolean;\n  audit?: boolean;\n  author?: string;\n  message?: string;\n  force?: boolean;\n}\n\nexport interface PathMigration {\n  from: string;\n  to: string;\n}\n\nexport interface AddGlobEntry {\n  pattern: string;\n  scope: LinkScope;\n  note?: string;\n}\n\nexport interface LinkedPathValidation {\n  checked: number;\n  existing_files: string[];\n  missing_paths: string[];\n  non_file_paths: string[];\n}\n\nexport interface LinkedPathAuditEntry {\n  path: string;\n  linked_by_count: number;\n  linked_item_ids: string[];\n}\n\nexport interface LinkedArtifactResult {\n  id: string;\n  changed: boolean;\n  count: number;\n  migrations_applied?: number;\n  validation?: LinkedPathValidation;\n  audit?: LinkedPathAuditEntry[];\n  artifacts: LinkedArtifact[];\n}\n\n/**\n * Configuration that adapts the shared linked-artifact command core to a\n * specific resource kind (files or docs) while preserving every behavioral\n * detail of the original twin implementations.\n */\nexport interface LinkedArtifactKindConfig {\n  /** Metadata key under which the artifacts are stored (e.g. \"files\" | \"docs\"). */\n  metadataKey: \"files\" | \"docs\";\n  /** Mutation op recorded in history (e.g. \"files_add\" | \"docs_add\"). */\n  op: \"files_add\" | \"docs_add\";\n  /** Noun used in the \"bare <noun> path\" --add usage error (e.g. \"file\" | \"doc\"). */\n  bareNoun: \"file\" | \"doc\";\n  /**\n   * Whether this kind honors the append-stable option. files supports it;\n   * docs always sorts and must never expose append-stable behavior.\n   */\n  supportsAppendStable: boolean;\n}\n\nexport function ensureScope(raw: string | undefined): LinkScope {\n  const value = (raw ?? \"project\") as LinkScope;\n  if (!SCOPE_VALUES.includes(value)) {\n    throw new PmCliError(\n      `Invalid scope \"${raw}\". Valid scopes: ${SCOPE_VALUES.join(\", \")} (default: project).`,\n      EXIT_CODE.USAGE,\n    );\n  }\n  return value;\n}\n\nexport function looksLikeStructuredPathEntry(raw: string): boolean {\n  if (raw.startsWith(\"```\") || raw.includes(\"\\n\")) {\n    return true;\n  }\n  return /^(?:[-*+]\\s+)?(?:path|scope|note)\\s*[:=]/i.test(raw);\n}\n\nexport function parseAddEntries(raw: string[] | undefined, bareNoun: \"file\" | \"doc\"): LinkedArtifact[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const trimmed = entry.trim();\n    const kv = looksLikeStructuredPathEntry(trimmed) ? parseCsvKv(entry, \"--add\") : { path: trimmed };\n    if (!kv.path) {\n      throw new PmCliError(`--add requires path=<value> or a bare ${bareNoun} path`, EXIT_CODE.USAGE);\n    }\n    return {\n      path: kv.path,\n      scope: ensureScope(kv.scope),\n      note: kv.note?.trim() || undefined,\n    };\n  });\n}\n\nexport function parseAddGlobEntries(raw: string[] | undefined): AddGlobEntry[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const trimmed = entry.trim();\n    if (!trimmed) {\n      throw new PmCliError(\"--add-glob requires a glob pattern value\", EXIT_CODE.USAGE);\n    }\n    if (trimmed.includes(\"=\") || /^(?:[-*+]\\s+)?(?:pattern|glob|path)\\s*[:=]/i.test(trimmed) || trimmed.startsWith(\"```\")) {\n      const kv = parseCsvKv(trimmed, \"--add-glob\");\n      const pattern = kv.pattern?.trim() || kv.glob?.trim() || kv.path?.trim();\n      if (!pattern) {\n        throw new PmCliError(\"--add-glob key/value form requires pattern=<glob>\", EXIT_CODE.USAGE);\n      }\n      return {\n        pattern,\n        scope: ensureScope(kv.scope),\n        note: kv.note?.trim() || undefined,\n      };\n    }\n    return {\n      pattern: trimmed,\n      scope: \"project\",\n    };\n  });\n}\n\nexport function parseRemoveEntries(raw: string[] | undefined): string[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const trimmed = entry.trim();\n    if (!trimmed) {\n      throw new PmCliError(\"--remove requires a path value\", EXIT_CODE.USAGE);\n    }\n    if (trimmed.includes(\"=\") || /^(?:[-*+]\\s+)?path\\s*[:=]/i.test(trimmed) || trimmed.startsWith(\"```\")) {\n      const kv = parseCsvKv(trimmed, \"--remove\");\n      if (!kv.path) {\n        throw new PmCliError(\"--remove key/value form requires path=<value>\", EXIT_CODE.USAGE);\n      }\n      return kv.path;\n    }\n    return trimmed;\n  });\n}\n\nexport function parseMigrateEntries(raw: string[] | undefined): PathMigration[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const kv = parseCsvKv(entry, \"--migrate\");\n    const from = kv.from?.trim();\n    const to = kv.to?.trim();\n    if (!from || !to) {\n      throw new PmCliError(\"--migrate requires from=<value> and to=<value>\", EXIT_CODE.USAGE);\n    }\n    return { from, to };\n  });\n}\n\nexport function applyPathMigrations(artifactPath: string, migrations: PathMigration[]): string {\n  let next = artifactPath;\n  for (const migration of migrations) {\n    if (next.startsWith(migration.from)) {\n      next = `${migration.to}${next.slice(migration.from.length)}`;\n    }\n  }\n  return next;\n}\n\nexport function normalizeLinkedPath(value: string): string {\n  return value.split(path.sep).join(\"/\");\n}\n\nexport async function expandAddGlobEntries(entries: AddGlobEntry[]): Promise<LinkedArtifact[]> {\n  const expanded: LinkedArtifact[] = [];\n  for (const entry of entries) {\n    const absolutePattern = path.isAbsolute(entry.pattern);\n    const matches = await fg(entry.pattern, {\n      cwd: process.cwd(),\n      absolute: absolutePattern,\n      onlyFiles: true,\n      dot: true,\n      unique: true,\n      followSymbolicLinks: true,\n    });\n    const sortedMatches = [...new Set(matches.map((match) => normalizeLinkedPath(path.normalize(match))))].sort((left, right) =>\n      left.localeCompare(right),\n    );\n    for (const matchedPath of sortedMatches) {\n      expanded.push({\n        path: matchedPath,\n        scope: entry.scope,\n        note: entry.note,\n      });\n    }\n  }\n  return expanded;\n}\n\nexport function artifactKey(value: Pick<LinkedArtifact, \"path\" | \"scope\">): string {\n  return `${value.path}::${value.scope}`;\n}\n\nexport function sortLinkedArtifacts(artifacts: LinkedArtifact[]): LinkedArtifact[] {\n  return [...artifacts].sort((left, right) => {\n    const byPath = left.path.localeCompare(right.path);\n    if (byPath !== 0) return byPath;\n    return left.scope.localeCompare(right.scope);\n  });\n}\n\nexport function dedupeLinkedArtifacts(artifacts: LinkedArtifact[]): LinkedArtifact[] {\n  return [...new Map(artifacts.map((entry) => [artifactKey(entry), entry])).values()].map((entry) => ({\n    ...entry,\n    note: entry.note?.trim() || undefined,\n  }));\n}\n\nexport async function validateLinkedPaths(paths: string[]): Promise<LinkedPathValidation> {\n  const uniquePaths = [...new Set(paths)].sort((left, right) => left.localeCompare(right));\n  const existingFiles: string[] = [];\n  const missingPaths: string[] = [];\n  const nonFilePaths: string[] = [];\n  for (const relativePath of uniquePaths) {\n    const resolvedPath = path.isAbsolute(relativePath) ? relativePath : path.resolve(process.cwd(), relativePath);\n    try {\n      const stats = await fs.stat(resolvedPath);\n      if (stats.isFile()) {\n        existingFiles.push(relativePath);\n      } else {\n        nonFilePaths.push(relativePath);\n      }\n    } catch (error: unknown) {\n      if (typeof error === \"object\" && error !== null && \"code\" in error && (error as { code?: string }).code === \"ENOENT\") {\n        missingPaths.push(relativePath);\n        continue;\n      }\n      nonFilePaths.push(relativePath);\n    }\n  }\n  return {\n    checked: uniquePaths.length,\n    existing_files: existingFiles,\n    missing_paths: missingPaths,\n    non_file_paths: nonFilePaths,\n  };\n}\n\nexport function buildLinkedPathAudit(\n  paths: string[],\n  allItems: Array<{ id: string; artifacts?: LinkedArtifact[] }>,\n): LinkedPathAuditEntry[] {\n  const index = new Map<string, Set<string>>();\n  for (const item of allItems) {\n    for (const linkedArtifact of item.artifacts ?? []) {\n      const seen = index.get(linkedArtifact.path) ?? new Set<string>();\n      seen.add(item.id);\n      index.set(linkedArtifact.path, seen);\n    }\n  }\n  return [...new Set(paths)]\n    .sort((left, right) => left.localeCompare(right))\n    .map((linkedPath) => {\n      const linkedIds = [...(index.get(linkedPath) ?? new Set<string>())].sort((left, right) => left.localeCompare(right));\n      return {\n        path: linkedPath,\n        linked_by_count: linkedIds.length,\n        linked_item_ids: linkedIds,\n      };\n    });\n}\n\n/**\n * Shared linked-artifact list/mutate command core used by runFiles and runDocs.\n * The kind config selects metadata key, op, bare-path noun, and whether\n * append-stable ordering is honored, preserving each twin's exact semantics.\n */\nexport async function runLinkedArtifacts(\n  id: string,\n  options: LinkedArtifactCommandOptions,\n  global: GlobalOptions,\n  config: LinkedArtifactKindConfig,\n): Promise<LinkedArtifactResult> {\n  const { metadataKey } = config;\n  const stdinResolver = createStdinTokenResolver();\n  const pmRoot = resolvePmRoot(process.cwd(), global.path);\n  if (!(await pathExists(getSettingsPath(pmRoot)))) {\n    throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);\n  }\n  const settings = await readSettings(pmRoot);\n  const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());\n  const resolvedAdds = await stdinResolver.resolveList(options.add, \"--add\");\n  const resolvedAddGlobs = await stdinResolver.resolveList(options.addGlob, \"--add-glob\");\n  const resolvedRemoves = await stdinResolver.resolveList(options.remove, \"--remove\");\n  const resolvedMigrations = await stdinResolver.resolveList(options.migrate, \"--migrate\");\n  const parsedAdds = parseAddEntries(resolvedAdds, config.bareNoun);\n  const addGlobs = parseAddGlobEntries(resolvedAddGlobs);\n  const expandedGlobAdds = await expandAddGlobEntries(addGlobs);\n  const adds = [...parsedAdds, ...expandedGlobAdds];\n  const removes = parseRemoveEntries(resolvedRemoves);\n  const migrations = parseMigrateEntries(resolvedMigrations);\n  const shouldMutate = adds.length > 0 || removes.length > 0 || migrations.length > 0;\n\n  const collectAuditItems = async (): Promise<Array<{ id: string; artifacts?: LinkedArtifact[] }>> =>\n    (await listAllFrontMatter(pmRoot, settings.item_format, typeRegistry.type_to_folder, undefined, settings.schema)).map((entry) => ({\n      id: entry.id,\n      artifacts: (entry as Record<string, unknown>)[metadataKey] as LinkedArtifact[] | undefined,\n    }));\n\n  if (!shouldMutate) {\n    const located = await locateItem(pmRoot, id, settings.id_prefix, settings.item_format, typeRegistry.type_to_folder);\n    if (!located) {\n      throw new PmCliError(`Item ${id} not found`, EXIT_CODE.NOT_FOUND);\n    }\n    const loaded = await readLocatedItem(located, { schema: settings.schema });\n    const artifacts = ((loaded.document.metadata as Record<string, unknown>)[metadataKey] as LinkedArtifact[] | undefined) ?? [];\n    return {\n      id: located.id,\n      artifacts,\n      changed: false,\n      count: artifacts.length,\n      validation: options.validatePaths ? await validateLinkedPaths(artifacts.map((entry) => entry.path)) : undefined,\n      audit: options.audit ? buildLinkedPathAudit(artifacts.map((entry) => entry.path), await collectAuditItems()) : undefined,\n    };\n  }\n\n  const author = resolveAuthor(options.author, settings.author_default);\n  const result = await mutateItem({\n    pmRoot,\n    settings,\n    id,\n    op: config.op,\n    author,\n    message: options.message,\n    force: options.force,\n    mutate(document) {\n      const metadata = document.metadata as Record<string, unknown>;\n      const next = [...((metadata[metadataKey] as LinkedArtifact[] | undefined) ?? [])];\n      let migrationCount = 0;\n      if (migrations.length > 0) {\n        for (let index = 0; index < next.length; index += 1) {\n          const migratedPath = applyPathMigrations(next[index].path, migrations);\n          if (migratedPath !== next[index].path) {\n            next[index] = { ...next[index], path: migratedPath };\n            migrationCount += 1;\n          }\n        }\n      }\n      const migratedAdds = adds.map((entry) => {\n        const migratedPath = applyPathMigrations(entry.path, migrations);\n        if (migratedPath !== entry.path) {\n          migrationCount += 1;\n        }\n        return {\n          ...entry,\n          path: migratedPath,\n        };\n      });\n      const migratedRemoves = removes.map((entry) => applyPathMigrations(entry, migrations));\n      for (const add of migratedAdds) {\n        const exists = next.some((entry) => entry.path === add.path && entry.scope === add.scope);\n        if (!exists) {\n          next.push(add);\n        }\n      }\n      if (migratedRemoves.length > 0) {\n        for (let i = next.length - 1; i >= 0; i -= 1) {\n          if (migratedRemoves.includes(next[i].path)) {\n            next.splice(i, 1);\n          }\n        }\n      }\n      const deduped = dedupeLinkedArtifacts(next);\n      const normalized = config.supportsAppendStable && options.appendStable ? deduped : sortLinkedArtifacts(deduped);\n      if (normalized.length > 0) {\n        metadata[metadataKey] = normalized;\n      } else {\n        delete metadata[metadataKey];\n      }\n      return { changedFields: [metadataKey], warnings: migrationCount > 0 ? [`path_migrations_applied:${migrationCount}`] : [] };\n    },\n  });\n\n  const artifacts = ((result.item as Record<string, unknown>)[metadataKey] as LinkedArtifact[] | undefined) ?? [];\n  const migrationWarning = result.warnings.find((warning) => warning.startsWith(\"path_migrations_applied:\"));\n  const migrationCount = migrationWarning ? Number(migrationWarning.slice(\"path_migrations_applied:\".length)) : 0;\n  const allItems = options.audit ? await collectAuditItems() : [];\n  return {\n    id: result.item.id,\n    artifacts,\n    changed: true,\n    count: artifacts.length,\n    migrations_applied: migrationCount > 0 ? migrationCount : undefined,\n    validation: options.validatePaths ? await validateLinkedPaths(artifacts.map((entry) => entry.path)) : undefined,\n    audit: options.audit ? buildLinkedPathAudit(artifacts.map((entry) => entry.path), allItems) : undefined,\n  };\n}\n\n/**\n * Re-key the generic `artifacts` field to the resource-specific name (files/docs)\n * while preserving the original key order and presence so kind-specific result\n * shapes (and their deterministic JSON key ordering) stay byte-identical.\n */\nexport function renameArtifactsResultKey(result: LinkedArtifactResult, key: \"files\" | \"docs\"): Record<string, unknown> {\n  const out: Record<string, unknown> = {};\n  for (const [field, value] of Object.entries(result)) {\n    out[field === \"artifacts\" ? key : field] = value;\n  }\n  return 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package/dist/cli-bundle/chunks/chunk-EAQLLID6.js.map

@@ -1 +0,0 @@
-{"version":3,"sources":["../../../../../../../../core/history/drift-scan.ts","../../../../../../../../core/diagnostics/remediation.ts"],"sourcesContent":["import fs from \"fs/promises\";\nimport { createHash } from \"node:crypto\";\nimport path from \"node:path\";\nimport { getHistoryPath } from \"../store/paths.js\";\nimport { writeFileAtomic } from \"../fs/fs-utils.js\";\nimport { hashDocument } from \"./history.js\";\nimport { verifyHistoryChain } from \"./replay.js\";\nimport type { HistoryEntry, ItemMetadata } from \"../../types/index.js\";\n\nexport interface DriftScanResult {\n  missingStreams: string[];\n  unreadableStreams: string[];\n  hashMismatches: string[];\n  chainMismatches: string[];\n  driftedItems: string[];\n}\n\nconst DRIFT_CACHE_VERSION = 2;\nconst DRIFT_CACHE_FILENAME = \"history-drift-cache.json\";\n\ninterface DriftCacheEntry {\n  mtime_ms: number;\n  ctime_ms: number;\n  size: number;\n  content_hash: string;\n  latest_after_hash: string;\n  chain_ok: boolean;\n}\n\ninterface DriftCacheEnvelope {\n  version: number;\n  entries: Record<string, DriftCacheEntry>;\n}\n\nfunction getDriftCachePath(pmRoot: string): string {\n  return path.join(pmRoot, \"runtime\", DRIFT_CACHE_FILENAME);\n}\n\nasync function loadDriftCache(pmRoot: string): Promise<DriftCacheEnvelope | null> {\n  try {\n    const raw = await fs.readFile(getDriftCachePath(pmRoot), \"utf8\");\n    const parsed = JSON.parse(raw) as DriftCacheEnvelope;\n    if (parsed.version !== DRIFT_CACHE_VERSION || typeof parsed.entries !== \"object\" || parsed.entries === null) {\n      return null;\n    }\n    return parsed;\n  } catch {\n    return null;\n  }\n}\n\nfunction isErrno(error: unknown, code: string): boolean {\n  return typeof error === \"object\" && error !== null && \"code\" in error && (error as { code?: string }).code === code;\n}\n\ninterface StreamVerification {\n  latestAfterHash: string;\n  chainOk: boolean;\n  contentHash: string;\n}\n\nfunction hashContent(raw: string): string {\n  return createHash(\"sha256\").update(raw).digest(\"hex\");\n}\n\nasync function readHistoryContentHash(historyPath: string): Promise<string> {\n  const raw = await fs.readFile(historyPath, \"utf8\");\n  return hashContent(raw);\n}\n\n/**\n * Read and fully verify one history stream's hash chain. Returns null for an\n * empty/missing stream (caller records it as a missing stream).\n */\nasync function verifyHistoryStream(historyPath: string): Promise<StreamVerification | null> {\n  const raw = await fs.readFile(historyPath, \"utf8\");\n  const contentHash = hashContent(raw);\n  if (raw.trim().length === 0) {\n    return null;\n  }\n  const entries: HistoryEntry[] = [];\n  let latestAfterHash: string | null = null;\n  for (const line of raw.split(/\\r?\\n/)) {\n    const trimmed = line.trim();\n    if (trimmed.length === 0) {\n      continue;\n    }\n    const parsed = JSON.parse(trimmed) as HistoryEntry;\n    if (typeof parsed.after_hash !== \"string\" || parsed.after_hash.trim().length === 0) {\n      throw new Error(\"missing after_hash\");\n    }\n    entries.push(parsed);\n    latestAfterHash = parsed.after_hash;\n  }\n  /* c8 ignore start -- defensive guard for future history schema changes. */\n  if (!latestAfterHash) {\n    return null;\n  }\n  /* c8 ignore stop */\n  return {\n    latestAfterHash,\n    chainOk: verifyHistoryChain(entries).ok,\n    contentHash,\n  };\n}\n\n/**\n * Scan every item's history stream for drift (missing/unreadable streams, broken\n * hash chains, and item/history hash mismatches).\n *\n * Full chain re-verification of a 17MB+ history tree is the dominant cost of\n * `pm health`. We cache the per-stream verification keyed by the history file's\n * mtime/ctime/size + content hash: metadata-stable replacements (same stat tuple)\n * can still happen, so each metadata hit recomputes a content hash guard before\n * trusting the cached chain/hash verification.\n */\nexport async function scanHistoryDrift(\n  pmRoot: string,\n  items: Array<ItemMetadata & { body: string }>,\n): Promise<DriftScanResult> {\n  const missingStreams: string[] = [];\n  const unreadableStreams: string[] = [];\n  const hashMismatches: string[] = [];\n  const chainMismatches: string[] = [];\n\n  const cache = await loadDriftCache(pmRoot);\n  const previousEntries: Record<string, DriftCacheEntry> = cache?.entries ?? {};\n  const nextEntries: Record<string, DriftCacheEntry> = {};\n  let cacheDirty = false;\n\n  for (const item of items) {\n    const historyPath = getHistoryPath(pmRoot, item.id);\n\n    let stat: Awaited<ReturnType<typeof fs.stat>>;\n    try {\n      stat = await fs.stat(historyPath);\n    } catch (error: unknown) {\n      if (isErrno(error, \"ENOENT\")) {\n        missingStreams.push(item.id);\n      } else {\n        unreadableStreams.push(item.id);\n      }\n      continue;\n    }\n\n    const loadStreamVerification = async (): Promise<StreamVerification | null | \"unreadable\"> => {\n      try {\n        return await verifyHistoryStream(historyPath);\n      } catch {\n        return \"unreadable\";\n      }\n    };\n\n    const loadFreshVerification = async (): Promise<StreamVerification | null> => {\n      const loaded = await loadStreamVerification();\n      if (loaded === \"unreadable\") {\n        unreadableStreams.push(item.id);\n        return null;\n      }\n      if (!loaded) {\n        missingStreams.push(item.id);\n        return null;\n      }\n      return loaded;\n    };\n\n    const cached = previousEntries[item.id];\n    let verification: StreamVerification;\n    const metadataMatchesCache =\n      cached !== undefined &&\n      cached.mtime_ms === stat.mtimeMs &&\n      cached.ctime_ms === stat.ctimeMs &&\n      cached.size === stat.size;\n    const cachedContentHash =\n      typeof cached?.content_hash === \"string\" && cached.content_hash.length > 0 ? cached.content_hash : undefined;\n    const canUseCache = metadataMatchesCache && cachedContentHash !== undefined;\n    if (canUseCache && cached) {\n      let currentContentHash: string;\n      try {\n        currentContentHash = await readHistoryContentHash(historyPath);\n      } catch {\n        unreadableStreams.push(item.id);\n        continue;\n      }\n      if (currentContentHash === cachedContentHash) {\n        verification = {\n          latestAfterHash: cached.latest_after_hash,\n          chainOk: cached.chain_ok,\n          contentHash: currentContentHash,\n        };\n      } else {\n        cacheDirty = true;\n        const refreshed = await loadFreshVerification();\n        if (!refreshed) {\n          continue;\n        }\n        verification = refreshed;\n      }\n    } else {\n      cacheDirty = true;\n      const refreshed = await loadFreshVerification();\n      if (!refreshed) {\n        continue;\n      }\n      verification = refreshed;\n    }\n\n    if (!verification.chainOk) {\n      chainMismatches.push(item.id);\n    }\n    nextEntries[item.id] = {\n      mtime_ms: stat.mtimeMs,\n      ctime_ms: stat.ctimeMs,\n      size: stat.size,\n      content_hash: verification.contentHash,\n      latest_after_hash: verification.latestAfterHash,\n      chain_ok: verification.chainOk,\n    };\n\n    const { body, ...frontMatter } = item;\n    const currentHash = hashDocument({\n      metadata: frontMatter as ItemMetadata,\n      body,\n    });\n    if (currentHash !== verification.latestAfterHash) {\n      hashMismatches.push(item.id);\n    }\n  }\n\n  if (cacheDirty || Object.keys(previousEntries).length !== Object.keys(nextEntries).length) {\n    const cachePath = getDriftCachePath(pmRoot);\n    try {\n      await fs.mkdir(path.dirname(cachePath), { recursive: true });\n      await writeFileAtomic(cachePath, JSON.stringify({ version: DRIFT_CACHE_VERSION, entries: nextEntries }));\n    } catch {\n      // Best-effort cache write: a failed persist must never fail a health scan.\n    }\n  }\n\n  const driftedItems = [...new Set([...missingStreams, ...unreadableStreams, ...hashMismatches, ...chainMismatches])].sort((a, b) =>\n    a.localeCompare(b),\n  );\n  return { missingStreams, unreadableStreams, hashMismatches, chainMismatches, driftedItems };\n}\n","/**\n * Shared machine-executable remediation registry.\n *\n * `pm health` and `pm validate` both emit stable, colon-delimited warning tokens\n * (for example `history_drift_missing_stream:pm-abcd` or\n * `validate_resolution_missing_fields:3`). Agents that gate on these commands\n * previously had to hardcode the mapping from a warning code to the `pm` command\n * that fixes it. This module is the single source of truth for that mapping so\n * `pm health --json` (per-check `remediation_map`) and `pm validate --fix-hints`\n * (per-check `fix_hints`) can both surface executable remediation without any\n * duplicated, drift-prone lookup tables.\n *\n * Semantics of {@link RemediationEntry.command}: the suggested next `pm` command\n * an operator/agent should run to resolve findings with that code. Per-item\n * findings use an `<id>` placeholder (callers that have the concrete id may\n * substitute it); findings whose only fix is a manual file edit point at the\n * most useful diagnostic/repair command and describe the manual step in\n * {@link RemediationEntry.summary}.\n */\n\nexport interface RemediationEntry {\n  /**\n   * Stable warning-code prefix this entry resolves. A warning matches when it\n   * equals this code or begins with `<code>:`. Registry codes are mutually\n   * exclusive under that colon-boundary rule (no code is a `:`-delimited prefix\n   * of another — e.g. `settings:id_prefix_empty` is distinct from a bare\n   * `settings`, which is intentionally not registered), so `resolveRemediation`\n   * uses first-match with no ordering dependency.\n   */\n  readonly code: string;\n  /** Executable `pm` command (or imperative) that resolves the finding. May contain an `<id>` placeholder. */\n  readonly command: string;\n  /** One-line description of what the command does / which manual step it covers. */\n  readonly summary: string;\n}\n\n/**\n * Registry of every non-extension `pm health` / `pm validate` warning code and\n * its remediation. Extension findings keep their richer, contextual\n * `details.triage.remediation` produced by the extension health triage and are\n * intentionally excluded here (see pm-0hnu: \"all non-extension checks\").\n */\nexport const REMEDIATION_REGISTRY: readonly RemediationEntry[] = Object.freeze([\n  // --- pm health: directories ---\n  {\n    code: \"missing_directory\",\n    command: \"pm init\",\n    summary: \"Recreate missing tracker directories (pm init is idempotent and restores the scaffold).\",\n  },\n  // --- pm health: settings (read/parse) ---\n  {\n    code: \"settings_read_invalid_json\",\n    command: \"pm config list --json\",\n    summary:\n      \"settings.json is not valid JSON and pm fell back to defaults; fix the syntax error in the reported path, then re-run.\",\n  },\n  {\n    code: \"settings_read_invalid_schema\",\n    command: \"pm config list --json\",\n    summary:\n      \"settings.json failed schema validation and pm fell back to defaults; correct the reported key in the file, then re-run.\",\n  },\n  {\n    code: \"settings_read_merge_failed\",\n    command: \"pm config list --json\",\n    summary: \"Global/project settings could not be merged; reconcile the conflicting keys in the reported settings files.\",\n  },\n  // --- pm health: settings_values ---\n  {\n    code: \"settings:id_prefix_empty\",\n    command: \"pm config list --json\",\n    summary: 'id_prefix is empty; set a non-empty \"id_prefix\" in settings.json so generated item ids are well-formed.',\n  },\n  {\n    code: \"settings:locks_ttl_non_positive\",\n    command: \"pm config list --json\",\n    summary: 'locks.ttl_seconds must be positive; set a positive \"locks.ttl_seconds\" in settings.json.',\n  },\n  // --- pm health: telemetry (advisory) ---\n  {\n    code: \"telemetry_state_invalid_json\",\n    command: \"pm health --check-telemetry\",\n    summary: \"Local telemetry state file is corrupt; pm recreates it on the next flush. Advisory only.\",\n  },\n  {\n    code: \"telemetry_queue_invalid_rows\",\n    command: \"pm health --check-telemetry\",\n    summary: \"The telemetry queue has unparseable rows; they are skipped on the next flush. Advisory only.\",\n  },\n  {\n    code: \"telemetry_queue_pending\",\n    command: \"pm health --check-telemetry\",\n    summary: \"Telemetry events are queued; they flush automatically on the next reachable command. Advisory only.\",\n  },\n  {\n    code: \"telemetry_queue_high_retries\",\n    command: \"pm telemetry flush\",\n    summary:\n      \"Some queued telemetry events are near retry exhaustion; flush now and verify endpoint reachability before entries are dropped.\",\n  },\n  {\n    code: \"telemetry_endpoint_probe_failed\",\n    command: \"pm health --check-telemetry\",\n    summary: \"The telemetry endpoint is unreachable; events stay queued until it recovers. Advisory only.\",\n  },\n  {\n    code: \"telemetry_endpoint_probe_http_status\",\n    command: \"pm health --check-telemetry\",\n    summary: \"The telemetry endpoint returned a non-success status; events stay queued until it recovers. Advisory only.\",\n  },\n  {\n    code: \"telemetry_schema_version_behind\",\n    command: \"pm health --check-telemetry\",\n    summary: \"Client schema is behind server; upgrade pm-cli to emit the latest event shape.\",\n  },\n  // --- pm health: integrity ---\n  {\n    code: \"integrity_item_unreadable\",\n    command: \"pm validate --check-files --verbose-diagnostics\",\n    summary: \"An item file could not be read; restore or repair the file at the reported path.\",\n  },\n  {\n    code: \"integrity_item_parse_failed\",\n    command: \"pm validate --check-files --verbose-diagnostics\",\n    summary: \"An item file failed to parse; fix the malformed front matter at the reported path.\",\n  },\n  {\n    code: \"integrity_item_conflict_marker\",\n    command: \"pm validate --check-files --verbose-diagnostics\",\n    summary: \"An item file contains Git conflict markers; resolve the <<<<<<< / >>>>>>> markers at the reported line.\",\n  },\n  {\n    code: \"integrity_history_unreadable\",\n    command: \"pm history-repair <id>\",\n    summary: \"A history stream could not be read; re-anchor the affected item's history chain.\",\n  },\n  {\n    code: \"integrity_history_invalid_json\",\n    command: \"pm history-repair <id>\",\n    summary: \"A history stream contains invalid JSON; re-anchor the affected item's history chain.\",\n  },\n  {\n    code: \"integrity_history_conflict_marker\",\n    command: \"pm history-repair <id>\",\n    summary: \"A history stream contains Git conflict markers; resolve the markers, then re-anchor the chain.\",\n  },\n  // --- pm health: history_drift ---\n  {\n    code: \"history_drift_missing_stream\",\n    command: \"pm history-repair <id>\",\n    summary: \"The item has no history stream; re-anchor the chain to rebuild it.\",\n  },\n  {\n    code: \"history_drift_unreadable_stream\",\n    command: \"pm history-repair <id>\",\n    summary: \"The item's history stream is unreadable; re-anchor the chain.\",\n  },\n  {\n    code: \"history_drift_hash_mismatch\",\n    command: \"pm history-repair <id>\",\n    summary: \"The item's content hash no longer matches its history; re-anchor the chain.\",\n  },\n  {\n    code: \"history_drift_chain_mismatch\",\n    command: \"pm history-repair <id>\",\n    summary: \"The item's history chain is broken; re-anchor the chain.\",\n  },\n  // --- pm health: vectorization ---\n  {\n    code: \"vectorization_stale_items_remaining\",\n    command: \"pm health --refresh-vectors\",\n    summary: \"Some items have stale embeddings; refresh vectors so semantic search results stay current.\",\n  },\n  {\n    code: \"vectorization_embedding_identity_changed\",\n    command: \"pm reindex --mode semantic\",\n    summary: \"Embedding provider/model changed since the last index; run a semantic reindex to rebuild vectors.\",\n  },\n  // --- pm validate: metadata ---\n  // Note: validate_metadata_missing_author has no entry on purpose. `pm update\n  // --author` sets the mutation/audit author (history), not the item's\n  // `metadata.author` front-matter field, and there is no CLI flag that writes\n  // that field — so emitting a command here would record an audit entry without\n  // clearing the finding. A missing item author must be restored at the source.\n  {\n    code: \"validate_metadata_missing_acceptance_criteria\",\n    command: 'pm update <id> --acceptance-criteria \"<criteria>\"',\n    summary: \"Backfill the missing acceptance criteria on the reported item(s).\",\n  },\n  {\n    code: \"validate_metadata_missing_estimate\",\n    command: 'pm update <id> --estimate \"<estimate>\"',\n    summary: \"Backfill the missing estimate on the reported item(s).\",\n  },\n  {\n    code: \"validate_metadata_missing_close_reason\",\n    command: 'pm update <id> --close-reason \"<reason>\"',\n    summary: \"Backfill the missing close reason on the reported closed item(s).\",\n  },\n  {\n    code: \"validate_metadata_missing_reviewer\",\n    command: 'pm update <id> --reviewer \"<name>\"',\n    summary: \"Backfill the missing reviewer on the reported item(s).\",\n  },\n  {\n    code: \"validate_metadata_missing_risk\",\n    command: 'pm update <id> --risk \"<level>\"',\n    summary: \"Backfill the missing risk on the reported item(s).\",\n  },\n  {\n    code: \"validate_metadata_missing_confidence\",\n    command: 'pm update <id> --confidence \"<level>\"',\n    summary: \"Backfill the missing confidence on the reported item(s).\",\n  },\n  {\n    code: \"validate_metadata_missing_sprint\",\n    command: 'pm update <id> --sprint \"<sprint>\"',\n    summary: \"Backfill the missing sprint on the reported item(s).\",\n  },\n  {\n    code: \"validate_metadata_missing_release\",\n    command: 'pm update <id> --release \"<release>\"',\n    summary: \"Backfill the missing release on the reported item(s).\",\n  },\n  {\n    code: \"validate_metadata_custom_profile_missing_required_fields\",\n    command: 'pm config set metadata-required-fields --criterion \"<field>\"',\n    summary:\n      \"Config-driven finding: the custom metadata profile has no required fields configured and falls back to core, so configure the fields rather than mutating items.\",\n  },\n  // --- pm validate: resolution ---\n  {\n    code: \"validate_resolution_missing_fields\",\n    command: 'pm update <id> --resolution \"<how resolved>\"',\n    summary: \"Backfill resolution / expected_result / actual_result on the reported closed item(s).\",\n  },\n  // --- pm validate: lifecycle ---\n  {\n    code: \"validate_lifecycle_active_closure_like_metadata\",\n    command: \"pm update <id> --unset <closure-like-field>\",\n    summary:\n      \"Clear the closure-like field the validator flags on this active item — the detail row names it (resolution / actual-result / blocked-reason) — or close the item if it is actually done.\",\n  },\n  {\n    code: \"validate_lifecycle_active_terminal_parent\",\n    command: \"pm update <id> --parent <active-parent-id>\",\n    summary: \"Reopen the terminal parent or move the active child under a non-terminal parent.\",\n  },\n  {\n    code: \"validate_lifecycle_stale_blockers\",\n    command: \"pm update <id> --unset blocked-by --unset blocked-reason\",\n    summary:\n      \"Resolve the stale blocker the validator flags: clear blocked-by/blocked-reason when they linger on a non-blocked item or report a resolved blocker; if instead a blocked item is missing blocker context, add the context or move it out of a blocked status.\",\n  },\n  {\n    code: \"validate_lifecycle_dependency_cycles_error\",\n    command: \"pm update <id> --dep-remove <dep-id>\",\n    summary: \"Break the dependency cycle by removing one edge from the reported cycle.\",\n  },\n  {\n    code: \"validate_lifecycle_dependency_cycles\",\n    command: \"pm update <id> --dep-remove <dep-id>\",\n    summary: \"Break the dependency cycle by removing one edge from the reported cycle.\",\n  },\n  // --- pm validate: files ---\n  {\n    code: \"validate_files_missing_linked_paths\",\n    command: \"pm <files|docs> <id> --remove <path>\",\n    summary:\n      \"The check spans both item.files and item.docs under one code: restore the missing linked artifact, or unlink it with pm files (linked file) or pm docs (linked doc).\",\n  },\n  {\n    code: \"validate_files_orphaned_paths\",\n    command: \"pm <files|docs> <id> --add <path>\",\n    summary:\n      \"Link the orphaned artifact with pm files (file) or pm docs (doc), or remove it from the workspace.\",\n  },\n  {\n    code: \"validate_files_tracked_all_strict_forces_pm_internals\",\n    command: \"pm validate --check-files --include-pm-internals\",\n    summary: \"tracked-all-strict scan flagged pm internals; re-run with --include-pm-internals or a softer --scan-mode.\",\n  },\n  // --- pm validate: history_drift ---\n  {\n    code: \"validate_history_drift_missing_streams\",\n    command: \"pm history-repair <id>\",\n    summary: \"Re-anchor the history chains of the items missing a history stream.\",\n  },\n  {\n    code: \"validate_history_drift_unreadable_streams\",\n    command: \"pm history-repair <id>\",\n    summary: \"Re-anchor the history chains of the items with an unreadable history stream.\",\n  },\n  {\n    code: \"validate_history_drift_hash_mismatches\",\n    command: \"pm history-repair <id>\",\n    summary: \"Re-anchor the history chains of the items whose content hash drifted.\",\n  },\n  {\n    code: \"validate_history_drift_chain_mismatches\",\n    command: \"pm history-repair <id>\",\n    summary: \"Re-anchor the history chains of the items with a broken history chain.\",\n  },\n  // --- pm validate: command_references ---\n  {\n    code: \"validate_command_references_stale_pm_ids\",\n    command: 'pm update <id> --replace-tests --test \"command=<corrected-command>\" [--test ...]',\n    summary:\n      \"Correct the stale pm-ID inside the item's linked test command (the check scans tests[].command, not the body). --replace-tests overwrites the entire tests list, so re-include the item's other linked tests in the same call.\",\n  },\n]);\n\n/**\n * Resolve the remediation entry for a warning token, or `undefined` when no\n * entry is registered. A warning matches an entry when it equals the entry code\n * or begins with `<code>:` (the colon boundary keeps sibling codes such as\n * `validate_lifecycle_dependency_cycles` and\n * `validate_lifecycle_dependency_cycles_error` disjoint).\n *\n * First match is intentional and correct: registry codes are mutually exclusive\n * under the colon-boundary rule, so at most one entry can ever match a warning\n * and order is irrelevant. That invariant is enforced by a test (see\n * remediation-registry.spec.ts \"keeps every registry code mutually exclusive\"),\n * which is why this stays a simple linear scan rather than a longest-prefix\n * search — a longest-prefix tie-break is unreachable with disjoint codes.\n *\n * Accepts unknown input defensively (this is an exported helper SDK consumers\n * may call from untyped JS): a non-string `warning` resolves to `undefined`.\n */\nexport function resolveRemediation(warning: string): RemediationEntry | undefined {\n  if (typeof warning !== \"string\") {\n    return undefined;\n  }\n  const normalized = warning.trim();\n  for (const entry of REMEDIATION_REGISTRY) {\n    if (normalized === entry.code || normalized.startsWith(`${entry.code}:`)) {\n      return entry;\n    }\n  }\n  return undefined;\n}\n\n/**\n * Build a compact `remediation_map` (code -> command) for a set of warning\n * tokens. First match wins per code; unknown codes are skipped. Used by\n * `pm health --json` per-check details and as the source of deduped executable\n * commands for `pm validate --fix-hints`.\n */\nexport function buildRemediationMap(warnings: Iterable<string>): Record<string, string> {\n  const map: Record<string, string> = {};\n  for (const warning of warnings) {\n    const entry = resolveRemediation(warning);\n    if (entry !== undefined && !Object.prototype.hasOwnProperty.call(map, entry.code)) {\n      map[entry.code] = entry.command;\n    }\n  }\n  return map;\n}\n\n/**\n * Build a deduped, ordered list of executable remediation commands for a set of\n * warning tokens (one command per distinct matched code). Used by\n * `pm validate --fix-hints` for checks that do not already emit per-row\n * remediation commands.\n */\nexport function buildRemediationCommands(warnings: Iterable<string>): string[] {\n  return 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