@unbrained/pm-cli 2026.5.18 → 2026.5.24

package/dist/cli/commands/files.js

@@ -1,5 +1,5 @@
 
-!function(){try{var e="undefined"!=typeof window?window:"undefined"!=typeof global?global:"undefined"!=typeof globalThis?globalThis:"undefined"!=typeof self?self:{},n=(new e.Error).stack;n&&(e._sentryDebugIds=e._sentryDebugIds||{},e._sentryDebugIds[n]="edaeb52e-3a0a-5b37-bf99-c2d8572a5106")}catch(e){}}();
+!function(){try{var e="undefined"!=typeof window?window:"undefined"!=typeof global?global:"undefined"!=typeof globalThis?globalThis:"undefined"!=typeof self?self:{},n=(new e.Error).stack;n&&(e._sentryDebugIds=e._sentryDebugIds||{},e._sentryDebugIds[n]="0f86dc3a-ad23-5254-97f4-4408e1199b5e")}catch(e){}}();
 import fs from "node:fs/promises";
 import path from "node:path";
 import fg from "fast-glob";
@@ -13,15 +13,12 @@ import { listAllFrontMatter, locateItem, mutateItem, readLocatedItem } from "../
 import { getSettingsPath, resolvePmRoot } from "../../core/store/paths.js";
 import { readSettings } from "../../core/store/settings.js";
 import { SCOPE_VALUES } from "../../types/index.js";
-function resolveAuthor(candidate, fallback) {
-    const resolved = candidate ?? process.env.PM_AUTHOR ?? fallback;
-    const trimmed = resolved.trim();
-    return trimmed || "unknown";
-}
+import { resolveAuthor } from "../../core/shared/author.js";
+import { isPathWithinDirectory } from "../../core/fs/path-utils.js";
 function ensureScope(raw) {
     const value = (raw ?? "project");
     if (!SCOPE_VALUES.includes(value)) {
-        throw new PmCliError(`Invalid scope "${raw}"`, EXIT_CODE.USAGE);
+        throw new PmCliError(`Invalid scope "${raw}". Valid scopes: ${SCOPE_VALUES.join(", ")} (default: project).`, EXIT_CODE.USAGE);
     }
     return value;
 }
@@ -119,10 +116,6 @@ function normalizeLinkedPath(value) {
 function normalizeCandidatePathForOutput(value) {
     return normalizeLinkedPath(path.normalize(value));
 }
-function isPathInside(parentPath, childPath) {
-    const relative = path.relative(parentPath, childPath);
-    return relative === "" || (!relative.startsWith("..") && !path.isAbsolute(relative));
-}
 async function realpathForContainment(inputPath) {
     try {
         return await fs.realpath(inputPath);
@@ -297,7 +290,7 @@ async function resolveDiscoveredFile(rawPath, projectRoot) {
         realpathForContainment(projectRoot),
         realpathForContainment(absolutePath),
     ]);
-    if (isPathInside(canonicalProjectRoot, canonicalAbsolutePath)) {
+    if (isPathWithinDirectory(canonicalProjectRoot, canonicalAbsolutePath)) {
         const relativePath = path.relative(canonicalProjectRoot, canonicalAbsolutePath);
         if (!relativePath || relativePath.startsWith("..") || path.isAbsolute(relativePath)) {
             return undefined;
@@ -562,4 +555,4 @@ export async function runFilesDiscover(id, options, global) {
     };
 }
 //# sourceMappingURL=files.js.map
-//# debugId=edaeb52e-3a0a-5b37-bf99-c2d8572a5106
+//# debugId=0f86dc3a-ad23-5254-97f4-4408e1199b5e

package/dist/cli/commands/files.js.map

@@ -1 +1 @@
-{"version":3,"file":"files.js","sources":["cli/commands/files.ts"],"sourceRoot":"/","sourcesContent":["import fs from \"node:fs/promises\";\nimport path from \"node:path\";\nimport fg from \"fast-glob\";\nimport { pathExists } from \"../../core/fs/fs-utils.js\";\nimport { getActiveExtensionRegistrations } from \"../../core/extensions/index.js\";\nimport { createStdinTokenResolver, parseCsvKv } from \"../../core/item/parse.js\";\nimport { resolveItemTypeRegistry } from \"../../core/item/type-registry.js\";\nimport { EXIT_CODE } from \"../../core/shared/constants.js\";\nimport type { GlobalOptions } from \"../../core/shared/command-types.js\";\nimport { PmCliError } from \"../../core/shared/errors.js\";\nimport { listAllFrontMatter, locateItem, mutateItem, readLocatedItem } from \"../../core/store/item-store.js\";\nimport { getSettingsPath, resolvePmRoot } from \"../../core/store/paths.js\";\nimport { readSettings } from \"../../core/store/settings.js\";\nimport { SCOPE_VALUES } from \"../../types/index.js\";\nimport type { ItemDocument, LinkedFile, LinkScope } from \"../../types/index.js\";\n\nexport interface FilesCommandOptions {\n  add?: string[];\n  addGlob?: string[];\n  remove?: string[];\n  migrate?: string[];\n  list?: boolean;\n  appendStable?: boolean;\n  validatePaths?: boolean;\n  audit?: boolean;\n  author?: string;\n  message?: string;\n  force?: boolean;\n}\n\nexport interface FilesDiscoverOptions {\n  apply?: boolean;\n  appendStable?: boolean;\n  note?: string;\n  author?: string;\n  message?: string;\n  force?: boolean;\n}\n\ninterface PathMigration {\n  from: string;\n  to: string;\n}\n\ninterface AddGlobEntry {\n  pattern: string;\n  scope: LinkScope;\n  note?: string;\n}\n\ninterface LinkedPathValidation {\n  checked: number;\n  existing_files: string[];\n  missing_paths: string[];\n  non_file_paths: string[];\n}\n\ninterface LinkedPathAuditEntry {\n  path: string;\n  linked_by_count: number;\n  linked_item_ids: string[];\n}\n\nexport interface FilesDiscoveryCandidate {\n  path: string;\n  scope: LinkScope;\n  status: \"addable\" | \"already_linked\";\n  source_count: number;\n  source_fields: string[];\n  original_paths: string[];\n}\n\nexport interface FilesResult {\n  id: string;\n  files: LinkedFile[];\n  changed: boolean;\n  count: number;\n  migrations_applied?: number;\n  validation?: LinkedPathValidation;\n  audit?: LinkedPathAuditEntry[];\n}\n\nexport interface FilesDiscoverResult {\n  id: string;\n  files: LinkedFile[];\n  changed: boolean;\n  apply: boolean;\n  count: number;\n  candidate_count: number;\n  addable_count: number;\n  added_count: number;\n  skipped_existing_count: number;\n  candidates: FilesDiscoveryCandidate[];\n  added: LinkedFile[];\n  skipped_existing: FilesDiscoveryCandidate[];\n}\n\ninterface TextReference {\n  field: string;\n  value: string;\n}\n\ninterface RawPathReference {\n  field: string;\n  value: string;\n}\n\nfunction resolveAuthor(candidate: string | undefined, fallback: string): string {\n  const resolved = candidate ?? process.env.PM_AUTHOR ?? fallback;\n  const trimmed = resolved.trim();\n  return trimmed || \"unknown\";\n}\n\nfunction ensureScope(raw: string | undefined): LinkScope {\n  const value = (raw ?? \"project\") as LinkScope;\n  if (!SCOPE_VALUES.includes(value)) {\n    throw new PmCliError(`Invalid scope \"${raw}\"`, EXIT_CODE.USAGE);\n  }\n  return value;\n}\n\nfunction looksLikeStructuredPathEntry(raw: string): boolean {\n  if (raw.startsWith(\"```\") || raw.includes(\"\\n\")) {\n    return true;\n  }\n  return /^(?:[-*+]\\s+)?(?:path|scope|note)\\s*[:=]/i.test(raw);\n}\n\nfunction parseAddEntries(raw: string[] | undefined): LinkedFile[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const trimmed = entry.trim();\n    const kv = looksLikeStructuredPathEntry(trimmed) ? parseCsvKv(entry, \"--add\") : { path: trimmed };\n    if (!kv.path) {\n      throw new PmCliError(\"--add requires path=<value> or a bare file path\", EXIT_CODE.USAGE);\n    }\n    return {\n      path: kv.path,\n      scope: ensureScope(kv.scope),\n      note: kv.note?.trim() || undefined,\n    };\n  });\n}\n\nfunction parseAddGlobEntries(raw: string[] | undefined): AddGlobEntry[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const trimmed = entry.trim();\n    if (!trimmed) {\n      throw new PmCliError(\"--add-glob requires a glob pattern value\", EXIT_CODE.USAGE);\n    }\n    if (trimmed.includes(\"=\") || /^(?:[-*+]\\s+)?(?:pattern|glob|path)\\s*[:=]/i.test(trimmed) || trimmed.startsWith(\"```\")) {\n      const kv = parseCsvKv(trimmed, \"--add-glob\");\n      const pattern = kv.pattern?.trim() || kv.glob?.trim() || kv.path?.trim();\n      if (!pattern) {\n        throw new PmCliError(\"--add-glob key/value form requires pattern=<glob>\", EXIT_CODE.USAGE);\n      }\n      return {\n        pattern,\n        scope: ensureScope(kv.scope),\n        note: kv.note?.trim() || undefined,\n      };\n    }\n    return {\n      pattern: trimmed,\n      scope: \"project\",\n    };\n  });\n}\n\nfunction parseRemoveEntries(raw: string[] | undefined): string[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const trimmed = entry.trim();\n    if (!trimmed) {\n      throw new PmCliError(\"--remove requires a path value\", EXIT_CODE.USAGE);\n    }\n    if (trimmed.includes(\"=\") || /^(?:[-*+]\\s+)?path\\s*[:=]/i.test(trimmed) || trimmed.startsWith(\"```\")) {\n      const kv = parseCsvKv(trimmed, \"--remove\");\n      if (!kv.path) {\n        throw new PmCliError(\"--remove key/value form requires path=<value>\", EXIT_CODE.USAGE);\n      }\n      return kv.path;\n    }\n    return trimmed;\n  });\n}\n\nfunction parseMigrateEntries(raw: string[] | undefined): PathMigration[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const kv = parseCsvKv(entry, \"--migrate\");\n    const from = kv.from?.trim();\n    const to = kv.to?.trim();\n    if (!from || !to) {\n      throw new PmCliError(\"--migrate requires from=<value> and to=<value>\", EXIT_CODE.USAGE);\n    }\n    return { from, to };\n  });\n}\n\nfunction applyPathMigrations(filePath: string, migrations: PathMigration[]): string {\n  let next = filePath;\n  for (const migration of migrations) {\n    if (next.startsWith(migration.from)) {\n      next = `${migration.to}${next.slice(migration.from.length)}`;\n    }\n  }\n  return next;\n}\n\nfunction normalizeLinkedPath(value: string): string {\n  return value.split(path.sep).join(\"/\");\n}\n\nfunction normalizeCandidatePathForOutput(value: string): string {\n  return normalizeLinkedPath(path.normalize(value));\n}\n\nfunction isPathInside(parentPath: string, childPath: string): boolean {\n  const relative = path.relative(parentPath, childPath);\n  return relative === \"\" || (!relative.startsWith(\"..\") && !path.isAbsolute(relative));\n}\n\nasync function realpathForContainment(inputPath: string): Promise<string> {\n  try {\n    return await fs.realpath(inputPath);\n  } catch {\n    return path.resolve(inputPath);\n  }\n}\n\nfunction linkedFileResolvedKey(linkedFile: Pick<LinkedFile, \"path\" | \"scope\">, projectRoot: string): string {\n  const resolvedPath = path.isAbsolute(linkedFile.path)\n    ? path.resolve(linkedFile.path)\n    : path.resolve(projectRoot, linkedFile.path);\n  return `${normalizeCandidatePathForOutput(resolvedPath)}::${linkedFile.scope}`;\n}\n\nasync function expandAddGlobEntries(entries: AddGlobEntry[]): Promise<LinkedFile[]> {\n  const expanded: LinkedFile[] = [];\n  for (const entry of entries) {\n    const absolutePattern = path.isAbsolute(entry.pattern);\n    const matches = await fg(entry.pattern, {\n      cwd: process.cwd(),\n      absolute: absolutePattern,\n      onlyFiles: true,\n      dot: true,\n      unique: true,\n      followSymbolicLinks: true,\n    });\n    const sortedMatches = [...new Set(matches.map((match) => normalizeLinkedPath(path.normalize(match))))].sort((left, right) =>\n      left.localeCompare(right),\n    );\n    for (const matchedPath of sortedMatches) {\n      expanded.push({\n        path: matchedPath,\n        scope: entry.scope,\n        note: entry.note,\n      });\n    }\n  }\n  return expanded;\n}\n\nfunction fileKey(value: Pick<LinkedFile, \"path\" | \"scope\">): string {\n  return `${value.path}::${value.scope}`;\n}\n\nfunction sortLinkedFiles(files: LinkedFile[]): LinkedFile[] {\n  return [...files].sort((left, right) => {\n    const byPath = left.path.localeCompare(right.path);\n    if (byPath !== 0) return byPath;\n    return left.scope.localeCompare(right.scope);\n  });\n}\n\nfunction dedupeLinkedFiles(files: LinkedFile[]): LinkedFile[] {\n  return [...new Map(files.map((entry) => [fileKey(entry), entry])).values()].map((entry) => ({\n    ...entry,\n    note: entry.note?.trim() || undefined,\n  }));\n}\n\nasync function validateLinkedFilePaths(paths: string[]): Promise<LinkedPathValidation> {\n  const uniquePaths = [...new Set(paths)].sort((left, right) => left.localeCompare(right));\n  const existingFiles: string[] = [];\n  const missingPaths: string[] = [];\n  const nonFilePaths: string[] = [];\n  for (const relativePath of uniquePaths) {\n    const resolvedPath = path.isAbsolute(relativePath) ? relativePath : path.resolve(process.cwd(), relativePath);\n    try {\n      const stats = await fs.stat(resolvedPath);\n      if (stats.isFile()) {\n        existingFiles.push(relativePath);\n      } else {\n        nonFilePaths.push(relativePath);\n      }\n    } catch (error: unknown) {\n      if (typeof error === \"object\" && error !== null && \"code\" in error && (error as { code?: string }).code === \"ENOENT\") {\n        missingPaths.push(relativePath);\n        continue;\n      }\n      nonFilePaths.push(relativePath);\n    }\n  }\n  return {\n    checked: uniquePaths.length,\n    existing_files: existingFiles,\n    missing_paths: missingPaths,\n    non_file_paths: nonFilePaths,\n  };\n}\n\nfunction buildLinkedFileAudit(paths: string[], allItems: Array<{ id: string; files?: LinkedFile[] }>): LinkedPathAuditEntry[] {\n  const index = new Map<string, Set<string>>();\n  for (const item of allItems) {\n    for (const linkedFile of item.files ?? []) {\n      const seen = index.get(linkedFile.path) ?? new Set<string>();\n      seen.add(item.id);\n      index.set(linkedFile.path, seen);\n    }\n  }\n  return [...new Set(paths)]\n    .sort((left, right) => left.localeCompare(right))\n    .map((linkedPath) => {\n      const linkedIds = [...(index.get(linkedPath) ?? new Set<string>())].sort((left, right) => left.localeCompare(right));\n      return {\n        path: linkedPath,\n        linked_by_count: linkedIds.length,\n        linked_item_ids: linkedIds,\n      };\n    });\n}\n\nfunction collectTextReferences(value: unknown, fieldPath: string, references: TextReference[]): void {\n  if (typeof value === \"string\") {\n    const trimmed = value.trim();\n    if (trimmed.length > 0) {\n      references.push({ field: fieldPath, value: trimmed });\n    }\n    return;\n  }\n  if (Array.isArray(value)) {\n    value.forEach((entry, index) => collectTextReferences(entry, `${fieldPath}[${index}]`, references));\n    return;\n  }\n  if (typeof value === \"object\" && value !== null) {\n    for (const [key, nested] of Object.entries(value)) {\n      collectTextReferences(nested, fieldPath ? `${fieldPath}.${key}` : key, references);\n    }\n  }\n}\n\nfunction collectItemTextReferences(document: ItemDocument): TextReference[] {\n  const references: TextReference[] = [];\n  collectTextReferences(document.metadata, \"metadata\", references);\n  collectTextReferences(document.body, \"body\", references);\n  return references;\n}\n\nfunction cleanupPathToken(value: string): string {\n  let next = value.trim();\n  next = next.replace(/^[`\"'<([{]+/u, \"\");\n  next = next.replace(/[`\"'>)\\]},;!?]+$/u, \"\");\n  next = next.replace(/[.]+$/u, \"\");\n  next = next.replace(/:(?:\\d+)(?::\\d+)?$/u, \"\");\n  next = next.replace(/[.]+$/u, \"\");\n  return next;\n}\n\nfunction extractRawPathReferences(references: TextReference[]): RawPathReference[] {\n  const rawReferences: RawPathReference[] = [];\n  const absolutePattern = /(?:[A-Za-z]:[\\\\/]|\\/)[^\\s\"'`<>()\\[\\]{},;]+/gu;\n  const relativePattern =\n    /(?:\\.{1,2}[\\\\/])?(?:(?:[A-Za-z0-9_.@-]+[\\\\/])+[A-Za-z0-9_.@-]+|[A-Za-z0-9_.@-]+\\.[A-Za-z0-9][A-Za-z0-9._-]*)/gu;\n  for (const reference of references) {\n    const seenInField = new Set<string>();\n    for (const pattern of [absolutePattern, relativePattern]) {\n      pattern.lastIndex = 0;\n      for (const match of reference.value.matchAll(pattern)) {\n        const token = cleanupPathToken(match[0] ?? \"\");\n        if (!token || seenInField.has(token)) {\n          continue;\n        }\n        seenInField.add(token);\n        rawReferences.push({ field: reference.field, value: token });\n      }\n    }\n  }\n  return rawReferences;\n}\n\nasync function resolveDiscoveredFile(\n  rawPath: string,\n  projectRoot: string,\n): Promise<Pick<LinkedFile, \"path\" | \"scope\"> | undefined> {\n  const absolutePath = path.isAbsolute(rawPath) ? path.resolve(rawPath) : path.resolve(projectRoot, rawPath);\n  let stats;\n  try {\n    stats = await fs.stat(absolutePath);\n  } catch {\n    return undefined;\n  }\n  if (!stats.isFile()) {\n    return undefined;\n  }\n  const [canonicalProjectRoot, canonicalAbsolutePath] = await Promise.all([\n    realpathForContainment(projectRoot),\n    realpathForContainment(absolutePath),\n  ]);\n  if (isPathInside(canonicalProjectRoot, canonicalAbsolutePath)) {\n    const relativePath = path.relative(canonicalProjectRoot, canonicalAbsolutePath);\n    if (!relativePath || relativePath.startsWith(\"..\") || path.isAbsolute(relativePath)) {\n      return undefined;\n    }\n    return {\n      path: normalizeCandidatePathForOutput(relativePath),\n      scope: \"project\",\n    };\n  }\n  return {\n    path: normalizeCandidatePathForOutput(absolutePath),\n    scope: \"global\",\n  };\n}\n\nasync function discoverReferencedFiles(document: ItemDocument, projectRoot: string): Promise<FilesDiscoveryCandidate[]> {\n  const existingResolvedKeys = new Set((document.metadata.files ?? []).map((entry) => linkedFileResolvedKey(entry, projectRoot)));\n  const grouped = new Map<\n    string,\n    {\n      path: string;\n      scope: LinkScope;\n      sourceFields: Set<string>;\n      originalPaths: Set<string>;\n      sourceCount: number;\n    }\n  >();\n  const rawReferences = extractRawPathReferences(collectItemTextReferences(document));\n  for (const reference of rawReferences) {\n    const resolved = await resolveDiscoveredFile(reference.value, projectRoot);\n    if (!resolved) {\n      continue;\n    }\n    const key = linkedFileResolvedKey(resolved, projectRoot);\n    const existing = grouped.get(key) ?? {\n      path: resolved.path,\n      scope: resolved.scope,\n      sourceFields: new Set<string>(),\n      originalPaths: new Set<string>(),\n      sourceCount: 0,\n    };\n    existing.sourceFields.add(reference.field);\n    existing.originalPaths.add(reference.value);\n    existing.sourceCount += 1;\n    grouped.set(key, existing);\n  }\n  return [...grouped.entries()]\n    .map(([key, entry]) => ({\n      path: entry.path,\n      scope: entry.scope,\n      status: existingResolvedKeys.has(key) ? (\"already_linked\" as const) : (\"addable\" as const),\n      source_count: entry.sourceCount,\n      source_fields: [...entry.sourceFields].sort((left, right) => left.localeCompare(right)),\n      original_paths: [...entry.originalPaths].sort((left, right) => left.localeCompare(right)),\n    }))\n    .sort((left, right) => {\n      const byStatus = left.status.localeCompare(right.status);\n      if (byStatus !== 0) return byStatus;\n      const byPath = left.path.localeCompare(right.path);\n      if (byPath !== 0) return byPath;\n      return left.scope.localeCompare(right.scope);\n    });\n}\n\nexport async function runFiles(id: string, options: FilesCommandOptions, global: GlobalOptions): Promise<FilesResult> {\n  const stdinResolver = createStdinTokenResolver();\n  const pmRoot = resolvePmRoot(process.cwd(), global.path);\n  if (!(await pathExists(getSettingsPath(pmRoot)))) {\n    throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);\n  }\n  const settings = await readSettings(pmRoot);\n  const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());\n  const resolvedAdds = await stdinResolver.resolveList(options.add, \"--add\");\n  const resolvedAddGlobs = await stdinResolver.resolveList(options.addGlob, \"--add-glob\");\n  const resolvedRemoves = await stdinResolver.resolveList(options.remove, \"--remove\");\n  const resolvedMigrations = await stdinResolver.resolveList(options.migrate, \"--migrate\");\n  const parsedAdds = parseAddEntries(resolvedAdds);\n  const addGlobs = parseAddGlobEntries(resolvedAddGlobs);\n  const expandedGlobAdds = await expandAddGlobEntries(addGlobs);\n  const adds = [...parsedAdds, ...expandedGlobAdds];\n  const removes = parseRemoveEntries(resolvedRemoves);\n  const migrations = parseMigrateEntries(resolvedMigrations);\n  const shouldMutate = adds.length > 0 || removes.length > 0 || migrations.length > 0;\n\n  if (!shouldMutate) {\n    const located = await locateItem(pmRoot, id, settings.id_prefix, settings.item_format, typeRegistry.type_to_folder);\n    if (!located) {\n      throw new PmCliError(`Item ${id} not found`, EXIT_CODE.NOT_FOUND);\n    }\n    const loaded = await readLocatedItem(located, { schema: settings.schema });\n    const files = loaded.document.metadata.files ?? [];\n    return {\n      id: located.id,\n      files,\n      changed: false,\n      count: files.length,\n      validation: options.validatePaths ? await validateLinkedFilePaths(files.map((entry) => entry.path)) : undefined,\n      audit: options.audit\n        ? buildLinkedFileAudit(\n            files.map((entry) => entry.path),\n            (await listAllFrontMatter(pmRoot, settings.item_format, typeRegistry.type_to_folder, undefined, settings.schema)).map((entry) => ({\n              id: entry.id,\n              files: entry.files,\n            })),\n          )\n        : undefined,\n    };\n  }\n\n  const author = resolveAuthor(options.author, settings.author_default);\n  const result = await mutateItem({\n    pmRoot,\n    settings,\n    id,\n    op: \"files_add\",\n    author,\n    message: options.message,\n    force: options.force,\n    mutate(document) {\n      const next = [...(document.metadata.files ?? [])];\n      let migrationCount = 0;\n      if (migrations.length > 0) {\n        for (let index = 0; index < next.length; index += 1) {\n          const migratedPath = applyPathMigrations(next[index].path, migrations);\n          if (migratedPath !== next[index].path) {\n            next[index] = { ...next[index], path: migratedPath };\n            migrationCount += 1;\n          }\n        }\n      }\n      const migratedAdds = adds.map((entry) => {\n        const migratedPath = applyPathMigrations(entry.path, migrations);\n        if (migratedPath !== entry.path) {\n          migrationCount += 1;\n        }\n        return {\n          ...entry,\n          path: migratedPath,\n        };\n      });\n      const migratedRemoves = removes.map((entry) => applyPathMigrations(entry, migrations));\n      for (const add of migratedAdds) {\n        const exists = next.some((entry) => entry.path === add.path && entry.scope === add.scope);\n        if (!exists) {\n          next.push(add);\n        }\n      }\n      if (migratedRemoves.length > 0) {\n        for (let i = next.length - 1; i >= 0; i -= 1) {\n          if (migratedRemoves.includes(next[i].path)) {\n            next.splice(i, 1);\n          }\n        }\n      }\n      const deduped = dedupeLinkedFiles(next);\n      const normalized = options.appendStable ? deduped : sortLinkedFiles(deduped);\n      if (normalized.length > 0) {\n        document.metadata.files = normalized;\n      } else {\n        delete document.metadata.files;\n      }\n      return { changedFields: [\"files\"], warnings: migrationCount > 0 ? [`path_migrations_applied:${migrationCount}`] : [] };\n    },\n  });\n\n  const files = result.item.files ?? [];\n  const migrationWarning = result.warnings.find((warning) => warning.startsWith(\"path_migrations_applied:\"));\n  const migrationCount = migrationWarning ? Number(migrationWarning.split(\":\")[1] ?? \"0\") : 0;\n  const allItems = options.audit\n    ? (await listAllFrontMatter(pmRoot, settings.item_format, typeRegistry.type_to_folder, undefined, settings.schema)).map((entry) => ({\n        id: entry.id,\n        files: entry.files,\n      }))\n    : [];\n  return {\n    id: result.item.id,\n    files,\n    changed: true,\n    count: files.length,\n    migrations_applied: migrationCount > 0 ? migrationCount : undefined,\n    validation: options.validatePaths ? await validateLinkedFilePaths(files.map((entry) => entry.path)) : undefined,\n    audit: options.audit ? buildLinkedFileAudit(files.map((entry) => entry.path), allItems) : undefined,\n  };\n}\n\nexport async function runFilesDiscover(\n  id: string,\n  options: FilesDiscoverOptions,\n  global: GlobalOptions,\n): Promise<FilesDiscoverResult> {\n  const pmRoot = resolvePmRoot(process.cwd(), global.path);\n  if (!(await pathExists(getSettingsPath(pmRoot)))) {\n    throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);\n  }\n  const settings = await readSettings(pmRoot);\n  const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());\n  const located = await locateItem(pmRoot, id, settings.id_prefix, settings.item_format, typeRegistry.type_to_folder);\n  if (!located) {\n    throw new PmCliError(`Item ${id} not found`, EXIT_CODE.NOT_FOUND);\n  }\n  const loaded = await readLocatedItem(located, { schema: settings.schema });\n  const candidates = await discoverReferencedFiles(loaded.document, process.cwd());\n  const addableCandidates = candidates.filter((candidate) => candidate.status === \"addable\");\n  const skippedExisting = candidates.filter((candidate) => candidate.status === \"already_linked\");\n  const requestedApply = options.apply === true;\n  const note = options.note?.trim() || \"discovered from item text\";\n\n  if (!requestedApply || addableCandidates.length === 0) {\n    const files = loaded.document.metadata.files ?? [];\n    return {\n      id: located.id,\n      files,\n      changed: false,\n      apply: requestedApply,\n      count: files.length,\n      candidate_count: candidates.length,\n      addable_count: addableCandidates.length,\n      added_count: 0,\n      skipped_existing_count: skippedExisting.length,\n      candidates,\n      added: [],\n      skipped_existing: skippedExisting,\n    };\n  }\n\n  const author = resolveAuthor(options.author, settings.author_default);\n  const discoveredAdds: LinkedFile[] = addableCandidates.map((candidate) => ({\n    path: candidate.path,\n    scope: candidate.scope,\n    note,\n  }));\n  const result = await mutateItem({\n    pmRoot,\n    settings,\n    id,\n    op: \"files_discover\",\n    author,\n    message: options.message ?? \"Discover referenced file links\",\n    force: options.force,\n    mutate(document) {\n      const next = [...(document.metadata.files ?? [])];\n      const existingResolvedKeys = new Set(next.map((entry) => linkedFileResolvedKey(entry, process.cwd())));\n      const appliedAdds: LinkedFile[] = [];\n      for (const add of discoveredAdds) {\n        const resolvedKey = linkedFileResolvedKey(add, process.cwd());\n        if (existingResolvedKeys.has(resolvedKey)) {\n          continue;\n        }\n        next.push(add);\n        existingResolvedKeys.add(resolvedKey);\n        appliedAdds.push(add);\n      }\n      const deduped = dedupeLinkedFiles(next);\n      const normalized = options.appendStable ? deduped : sortLinkedFiles(deduped);\n      if (normalized.length > 0) {\n        document.metadata.files = normalized;\n      } else {\n        delete document.metadata.files;\n      }\n      return {\n        changedFields: appliedAdds.length > 0 ? [\"files\"] : [],\n        warnings: appliedAdds.length !== discoveredAdds.length ? [`files_discover_skipped_existing:${discoveredAdds.length - appliedAdds.length}`] : [],\n      };\n    },\n  });\n\n  const files = result.item.files ?? [];\n  const addedResolvedKeys = new Set(discoveredAdds.map((entry) => linkedFileResolvedKey(entry, process.cwd())));\n  const added = files.filter((entry) => addedResolvedKeys.has(linkedFileResolvedKey(entry, process.cwd())));\n  return {\n    id: result.item.id,\n    files,\n    changed: added.length > 0,\n    apply: true,\n    count: files.length,\n    candidate_count: candidates.length,\n    addable_count: addableCandidates.length,\n    added_count: added.length,\n    skipped_existing_count: skippedExisting.length,\n    candidates,\n    added,\n    skipped_existing: skippedExisting,\n  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Valid scopes: ${SCOPE_VALUES.join(\", \")} (default: project).`,\n      EXIT_CODE.USAGE,\n    );\n  }\n  return value;\n}\n\nfunction looksLikeStructuredPathEntry(raw: string): boolean {\n  if (raw.startsWith(\"```\") || raw.includes(\"\\n\")) {\n    return true;\n  }\n  return /^(?:[-*+]\\s+)?(?:path|scope|note)\\s*[:=]/i.test(raw);\n}\n\nfunction parseAddEntries(raw: string[] | undefined): LinkedFile[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const trimmed = entry.trim();\n    const kv = looksLikeStructuredPathEntry(trimmed) ? parseCsvKv(entry, \"--add\") : { path: trimmed };\n    if (!kv.path) {\n      throw new PmCliError(\"--add requires path=<value> or a bare file path\", EXIT_CODE.USAGE);\n    }\n    return {\n      path: kv.path,\n      scope: ensureScope(kv.scope),\n      note: kv.note?.trim() || undefined,\n    };\n  });\n}\n\nfunction parseAddGlobEntries(raw: string[] | undefined): AddGlobEntry[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const trimmed = entry.trim();\n    if (!trimmed) {\n      throw new PmCliError(\"--add-glob requires a glob pattern value\", EXIT_CODE.USAGE);\n    }\n    if (trimmed.includes(\"=\") || /^(?:[-*+]\\s+)?(?:pattern|glob|path)\\s*[:=]/i.test(trimmed) || trimmed.startsWith(\"```\")) {\n      const kv = parseCsvKv(trimmed, \"--add-glob\");\n      const pattern = kv.pattern?.trim() || kv.glob?.trim() || kv.path?.trim();\n      if (!pattern) {\n        throw new PmCliError(\"--add-glob key/value form requires pattern=<glob>\", EXIT_CODE.USAGE);\n      }\n      return {\n        pattern,\n        scope: ensureScope(kv.scope),\n        note: kv.note?.trim() || undefined,\n      };\n    }\n    return {\n      pattern: trimmed,\n      scope: \"project\",\n    };\n  });\n}\n\nfunction parseRemoveEntries(raw: string[] | undefined): string[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const trimmed = entry.trim();\n    if (!trimmed) {\n      throw new PmCliError(\"--remove requires a path value\", EXIT_CODE.USAGE);\n    }\n    if (trimmed.includes(\"=\") || /^(?:[-*+]\\s+)?path\\s*[:=]/i.test(trimmed) || trimmed.startsWith(\"```\")) {\n      const kv = parseCsvKv(trimmed, \"--remove\");\n      if (!kv.path) {\n        throw new PmCliError(\"--remove key/value form requires path=<value>\", EXIT_CODE.USAGE);\n      }\n      return kv.path;\n    }\n    return trimmed;\n  });\n}\n\nfunction parseMigrateEntries(raw: string[] | undefined): PathMigration[] {\n  if (!raw) return [];\n  return raw.map((entry) => {\n    const kv = parseCsvKv(entry, \"--migrate\");\n    const from = kv.from?.trim();\n    const to = kv.to?.trim();\n    if (!from || !to) {\n      throw new PmCliError(\"--migrate requires from=<value> and to=<value>\", EXIT_CODE.USAGE);\n    }\n    return { from, to };\n  });\n}\n\nfunction applyPathMigrations(filePath: string, migrations: PathMigration[]): string {\n  let next = filePath;\n  for (const migration of migrations) {\n    if (next.startsWith(migration.from)) {\n      next = `${migration.to}${next.slice(migration.from.length)}`;\n    }\n  }\n  return next;\n}\n\nfunction normalizeLinkedPath(value: string): string {\n  return value.split(path.sep).join(\"/\");\n}\n\nfunction normalizeCandidatePathForOutput(value: string): string {\n  return normalizeLinkedPath(path.normalize(value));\n}\n\n\nasync function realpathForContainment(inputPath: string): Promise<string> {\n  try {\n    return await fs.realpath(inputPath);\n  } catch {\n    return path.resolve(inputPath);\n  }\n}\n\nfunction linkedFileResolvedKey(linkedFile: Pick<LinkedFile, \"path\" | \"scope\">, projectRoot: string): string {\n  const resolvedPath = path.isAbsolute(linkedFile.path)\n    ? path.resolve(linkedFile.path)\n    : path.resolve(projectRoot, linkedFile.path);\n  return `${normalizeCandidatePathForOutput(resolvedPath)}::${linkedFile.scope}`;\n}\n\nasync function expandAddGlobEntries(entries: AddGlobEntry[]): Promise<LinkedFile[]> {\n  const expanded: LinkedFile[] = [];\n  for (const entry of entries) {\n    const absolutePattern = path.isAbsolute(entry.pattern);\n    const matches = await fg(entry.pattern, {\n      cwd: process.cwd(),\n      absolute: absolutePattern,\n      onlyFiles: true,\n      dot: true,\n      unique: true,\n      followSymbolicLinks: true,\n    });\n    const sortedMatches = [...new Set(matches.map((match) => normalizeLinkedPath(path.normalize(match))))].sort((left, right) =>\n      left.localeCompare(right),\n    );\n    for (const matchedPath of sortedMatches) {\n      expanded.push({\n        path: matchedPath,\n        scope: entry.scope,\n        note: entry.note,\n      });\n    }\n  }\n  return expanded;\n}\n\nfunction fileKey(value: Pick<LinkedFile, \"path\" | \"scope\">): string {\n  return `${value.path}::${value.scope}`;\n}\n\nfunction sortLinkedFiles(files: LinkedFile[]): LinkedFile[] {\n  return [...files].sort((left, right) => {\n    const byPath = left.path.localeCompare(right.path);\n    if (byPath !== 0) return byPath;\n    return left.scope.localeCompare(right.scope);\n  });\n}\n\nfunction dedupeLinkedFiles(files: LinkedFile[]): LinkedFile[] {\n  return [...new Map(files.map((entry) => [fileKey(entry), entry])).values()].map((entry) => ({\n    ...entry,\n    note: entry.note?.trim() || undefined,\n  }));\n}\n\nasync function validateLinkedFilePaths(paths: string[]): Promise<LinkedPathValidation> {\n  const uniquePaths = [...new Set(paths)].sort((left, right) => left.localeCompare(right));\n  const existingFiles: string[] = [];\n  const missingPaths: string[] = [];\n  const nonFilePaths: string[] = [];\n  for (const relativePath of uniquePaths) {\n    const resolvedPath = path.isAbsolute(relativePath) ? relativePath : path.resolve(process.cwd(), relativePath);\n    try {\n      const stats = await fs.stat(resolvedPath);\n      if (stats.isFile()) {\n        existingFiles.push(relativePath);\n      } else {\n        nonFilePaths.push(relativePath);\n      }\n    } catch (error: unknown) {\n      if (typeof error === \"object\" && error !== null && \"code\" in error && (error as { code?: string }).code === \"ENOENT\") {\n        missingPaths.push(relativePath);\n        continue;\n      }\n      nonFilePaths.push(relativePath);\n    }\n  }\n  return {\n    checked: uniquePaths.length,\n    existing_files: existingFiles,\n    missing_paths: missingPaths,\n    non_file_paths: nonFilePaths,\n  };\n}\n\nfunction buildLinkedFileAudit(paths: string[], allItems: Array<{ id: string; files?: LinkedFile[] }>): LinkedPathAuditEntry[] {\n  const index = new Map<string, Set<string>>();\n  for (const item of allItems) {\n    for (const linkedFile of item.files ?? []) {\n      const seen = index.get(linkedFile.path) ?? new Set<string>();\n      seen.add(item.id);\n      index.set(linkedFile.path, seen);\n    }\n  }\n  return [...new Set(paths)]\n    .sort((left, right) => left.localeCompare(right))\n    .map((linkedPath) => {\n      const linkedIds = [...(index.get(linkedPath) ?? new Set<string>())].sort((left, right) => left.localeCompare(right));\n      return {\n        path: linkedPath,\n        linked_by_count: linkedIds.length,\n        linked_item_ids: linkedIds,\n      };\n    });\n}\n\nfunction collectTextReferences(value: unknown, fieldPath: string, references: TextReference[]): void {\n  if (typeof value === \"string\") {\n    const trimmed = value.trim();\n    if (trimmed.length > 0) {\n      references.push({ field: fieldPath, value: trimmed });\n    }\n    return;\n  }\n  if (Array.isArray(value)) {\n    value.forEach((entry, index) => collectTextReferences(entry, `${fieldPath}[${index}]`, references));\n    return;\n  }\n  if (typeof value === \"object\" && value !== null) {\n    for (const [key, nested] of Object.entries(value)) {\n      collectTextReferences(nested, fieldPath ? `${fieldPath}.${key}` : key, references);\n    }\n  }\n}\n\nfunction collectItemTextReferences(document: ItemDocument): TextReference[] {\n  const references: TextReference[] = [];\n  collectTextReferences(document.metadata, \"metadata\", references);\n  collectTextReferences(document.body, \"body\", references);\n  return references;\n}\n\nfunction cleanupPathToken(value: string): string {\n  let next = value.trim();\n  next = next.replace(/^[`\"'<([{]+/u, \"\");\n  next = next.replace(/[`\"'>)\\]},;!?]+$/u, \"\");\n  next = next.replace(/[.]+$/u, \"\");\n  next = next.replace(/:(?:\\d+)(?::\\d+)?$/u, \"\");\n  next = next.replace(/[.]+$/u, \"\");\n  return next;\n}\n\nfunction extractRawPathReferences(references: TextReference[]): RawPathReference[] {\n  const rawReferences: RawPathReference[] = [];\n  const absolutePattern = /(?:[A-Za-z]:[\\\\/]|\\/)[^\\s\"'`<>()\\[\\]{},;]+/gu;\n  const relativePattern =\n    /(?:\\.{1,2}[\\\\/])?(?:(?:[A-Za-z0-9_.@-]+[\\\\/])+[A-Za-z0-9_.@-]+|[A-Za-z0-9_.@-]+\\.[A-Za-z0-9][A-Za-z0-9._-]*)/gu;\n  for (const reference of references) {\n    const seenInField = new Set<string>();\n    for (const pattern of [absolutePattern, relativePattern]) {\n      pattern.lastIndex = 0;\n      for (const match of reference.value.matchAll(pattern)) {\n        const token = cleanupPathToken(match[0] ?? \"\");\n        if (!token || seenInField.has(token)) {\n          continue;\n        }\n        seenInField.add(token);\n        rawReferences.push({ field: reference.field, value: token });\n      }\n    }\n  }\n  return rawReferences;\n}\n\nasync function resolveDiscoveredFile(\n  rawPath: string,\n  projectRoot: string,\n): Promise<Pick<LinkedFile, \"path\" | \"scope\"> | undefined> {\n  const absolutePath = path.isAbsolute(rawPath) ? path.resolve(rawPath) : path.resolve(projectRoot, rawPath);\n  let stats;\n  try {\n    stats = await fs.stat(absolutePath);\n  } catch {\n    return undefined;\n  }\n  if (!stats.isFile()) {\n    return undefined;\n  }\n  const [canonicalProjectRoot, canonicalAbsolutePath] = await Promise.all([\n    realpathForContainment(projectRoot),\n    realpathForContainment(absolutePath),\n  ]);\n  if (isPathWithinDirectory(canonicalProjectRoot, canonicalAbsolutePath)) {\n    const relativePath = path.relative(canonicalProjectRoot, canonicalAbsolutePath);\n    if (!relativePath || relativePath.startsWith(\"..\") || path.isAbsolute(relativePath)) {\n      return undefined;\n    }\n    return {\n      path: normalizeCandidatePathForOutput(relativePath),\n      scope: \"project\",\n    };\n  }\n  return {\n    path: normalizeCandidatePathForOutput(absolutePath),\n    scope: \"global\",\n  };\n}\n\nasync function discoverReferencedFiles(document: ItemDocument, projectRoot: string): Promise<FilesDiscoveryCandidate[]> {\n  const existingResolvedKeys = new Set((document.metadata.files ?? []).map((entry) => linkedFileResolvedKey(entry, projectRoot)));\n  const grouped = new Map<\n    string,\n    {\n      path: string;\n      scope: LinkScope;\n      sourceFields: Set<string>;\n      originalPaths: Set<string>;\n      sourceCount: number;\n    }\n  >();\n  const rawReferences = extractRawPathReferences(collectItemTextReferences(document));\n  for (const reference of rawReferences) {\n    const resolved = await resolveDiscoveredFile(reference.value, projectRoot);\n    if (!resolved) {\n      continue;\n    }\n    const key = linkedFileResolvedKey(resolved, projectRoot);\n    const existing = grouped.get(key) ?? {\n      path: resolved.path,\n      scope: resolved.scope,\n      sourceFields: new Set<string>(),\n      originalPaths: new Set<string>(),\n      sourceCount: 0,\n    };\n    existing.sourceFields.add(reference.field);\n    existing.originalPaths.add(reference.value);\n    existing.sourceCount += 1;\n    grouped.set(key, existing);\n  }\n  return [...grouped.entries()]\n    .map(([key, entry]) => ({\n      path: entry.path,\n      scope: entry.scope,\n      status: existingResolvedKeys.has(key) ? (\"already_linked\" as const) : (\"addable\" as const),\n      source_count: entry.sourceCount,\n      source_fields: [...entry.sourceFields].sort((left, right) => left.localeCompare(right)),\n      original_paths: [...entry.originalPaths].sort((left, right) => left.localeCompare(right)),\n    }))\n    .sort((left, right) => {\n      const byStatus = left.status.localeCompare(right.status);\n      if (byStatus !== 0) return byStatus;\n      const byPath = left.path.localeCompare(right.path);\n      if (byPath !== 0) return byPath;\n      return left.scope.localeCompare(right.scope);\n    });\n}\n\nexport async function runFiles(id: string, options: FilesCommandOptions, global: GlobalOptions): Promise<FilesResult> {\n  const stdinResolver = createStdinTokenResolver();\n  const pmRoot = resolvePmRoot(process.cwd(), global.path);\n  if (!(await pathExists(getSettingsPath(pmRoot)))) {\n    throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);\n  }\n  const settings = await readSettings(pmRoot);\n  const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());\n  const resolvedAdds = await stdinResolver.resolveList(options.add, \"--add\");\n  const resolvedAddGlobs = await stdinResolver.resolveList(options.addGlob, \"--add-glob\");\n  const resolvedRemoves = await stdinResolver.resolveList(options.remove, \"--remove\");\n  const resolvedMigrations = await stdinResolver.resolveList(options.migrate, \"--migrate\");\n  const parsedAdds = parseAddEntries(resolvedAdds);\n  const addGlobs = parseAddGlobEntries(resolvedAddGlobs);\n  const expandedGlobAdds = await expandAddGlobEntries(addGlobs);\n  const adds = [...parsedAdds, ...expandedGlobAdds];\n  const removes = parseRemoveEntries(resolvedRemoves);\n  const migrations = parseMigrateEntries(resolvedMigrations);\n  const shouldMutate = adds.length > 0 || removes.length > 0 || migrations.length > 0;\n\n  if (!shouldMutate) {\n    const located = await locateItem(pmRoot, id, settings.id_prefix, settings.item_format, typeRegistry.type_to_folder);\n    if (!located) {\n      throw new PmCliError(`Item ${id} not found`, EXIT_CODE.NOT_FOUND);\n    }\n    const loaded = await readLocatedItem(located, { schema: settings.schema });\n    const files = loaded.document.metadata.files ?? [];\n    return {\n      id: located.id,\n      files,\n      changed: false,\n      count: files.length,\n      validation: options.validatePaths ? await validateLinkedFilePaths(files.map((entry) => entry.path)) : undefined,\n      audit: options.audit\n        ? buildLinkedFileAudit(\n            files.map((entry) => entry.path),\n            (await listAllFrontMatter(pmRoot, settings.item_format, typeRegistry.type_to_folder, undefined, settings.schema)).map((entry) => ({\n              id: entry.id,\n              files: entry.files,\n            })),\n          )\n        : undefined,\n    };\n  }\n\n  const author = resolveAuthor(options.author, settings.author_default);\n  const result = await mutateItem({\n    pmRoot,\n    settings,\n    id,\n    op: \"files_add\",\n    author,\n    message: options.message,\n    force: options.force,\n    mutate(document) {\n      const next = [...(document.metadata.files ?? [])];\n      let migrationCount = 0;\n      if (migrations.length > 0) {\n        for (let index = 0; index < next.length; index += 1) {\n          const migratedPath = applyPathMigrations(next[index].path, migrations);\n          if (migratedPath !== next[index].path) {\n            next[index] = { ...next[index], path: migratedPath };\n            migrationCount += 1;\n          }\n        }\n      }\n      const migratedAdds = adds.map((entry) => {\n        const migratedPath = applyPathMigrations(entry.path, migrations);\n        if (migratedPath !== entry.path) {\n          migrationCount += 1;\n        }\n        return {\n          ...entry,\n          path: migratedPath,\n        };\n      });\n      const migratedRemoves = removes.map((entry) => applyPathMigrations(entry, migrations));\n      for (const add of migratedAdds) {\n        const exists = next.some((entry) => entry.path === add.path && entry.scope === add.scope);\n        if (!exists) {\n          next.push(add);\n        }\n      }\n      if (migratedRemoves.length > 0) {\n        for (let i = next.length - 1; i >= 0; i -= 1) {\n          if (migratedRemoves.includes(next[i].path)) {\n            next.splice(i, 1);\n          }\n        }\n      }\n      const deduped = dedupeLinkedFiles(next);\n      const normalized = options.appendStable ? deduped : sortLinkedFiles(deduped);\n      if (normalized.length > 0) {\n        document.metadata.files = normalized;\n      } else {\n        delete document.metadata.files;\n      }\n      return { changedFields: [\"files\"], warnings: migrationCount > 0 ? [`path_migrations_applied:${migrationCount}`] : [] };\n    },\n  });\n\n  const files = result.item.files ?? [];\n  const migrationWarning = result.warnings.find((warning) => warning.startsWith(\"path_migrations_applied:\"));\n  const migrationCount = migrationWarning ? Number(migrationWarning.split(\":\")[1] ?? \"0\") : 0;\n  const allItems = options.audit\n    ? (await listAllFrontMatter(pmRoot, settings.item_format, typeRegistry.type_to_folder, undefined, settings.schema)).map((entry) => ({\n        id: entry.id,\n        files: entry.files,\n      }))\n    : [];\n  return {\n    id: result.item.id,\n    files,\n    changed: true,\n    count: files.length,\n    migrations_applied: migrationCount > 0 ? migrationCount : undefined,\n    validation: options.validatePaths ? await validateLinkedFilePaths(files.map((entry) => entry.path)) : undefined,\n    audit: options.audit ? buildLinkedFileAudit(files.map((entry) => entry.path), allItems) : undefined,\n  };\n}\n\nexport async function runFilesDiscover(\n  id: string,\n  options: FilesDiscoverOptions,\n  global: GlobalOptions,\n): Promise<FilesDiscoverResult> {\n  const pmRoot = resolvePmRoot(process.cwd(), global.path);\n  if (!(await pathExists(getSettingsPath(pmRoot)))) {\n    throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);\n  }\n  const settings = await readSettings(pmRoot);\n  const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());\n  const located = await locateItem(pmRoot, id, settings.id_prefix, settings.item_format, typeRegistry.type_to_folder);\n  if (!located) {\n    throw new PmCliError(`Item ${id} not found`, EXIT_CODE.NOT_FOUND);\n  }\n  const loaded = await readLocatedItem(located, { schema: settings.schema });\n  const candidates = await discoverReferencedFiles(loaded.document, process.cwd());\n  const addableCandidates = candidates.filter((candidate) => candidate.status === \"addable\");\n  const skippedExisting = candidates.filter((candidate) => candidate.status === \"already_linked\");\n  const requestedApply = options.apply === true;\n  const note = options.note?.trim() || \"discovered from item text\";\n\n  if (!requestedApply || addableCandidates.length === 0) {\n    const files = loaded.document.metadata.files ?? [];\n    return {\n      id: located.id,\n      files,\n      changed: false,\n      apply: requestedApply,\n      count: files.length,\n      candidate_count: candidates.length,\n      addable_count: addableCandidates.length,\n      added_count: 0,\n      skipped_existing_count: skippedExisting.length,\n      candidates,\n      added: [],\n      skipped_existing: skippedExisting,\n    };\n  }\n\n  const author = resolveAuthor(options.author, settings.author_default);\n  const discoveredAdds: LinkedFile[] = addableCandidates.map((candidate) => ({\n    path: candidate.path,\n    scope: candidate.scope,\n    note,\n  }));\n  const result = await mutateItem({\n    pmRoot,\n    settings,\n    id,\n    op: \"files_discover\",\n    author,\n    message: options.message ?? \"Discover referenced file links\",\n    force: options.force,\n    mutate(document) {\n      const next = [...(document.metadata.files ?? [])];\n      const existingResolvedKeys = new Set(next.map((entry) => linkedFileResolvedKey(entry, process.cwd())));\n      const appliedAdds: LinkedFile[] = [];\n      for (const add of discoveredAdds) {\n        const resolvedKey = linkedFileResolvedKey(add, process.cwd());\n        if (existingResolvedKeys.has(resolvedKey)) {\n          continue;\n        }\n        next.push(add);\n        existingResolvedKeys.add(resolvedKey);\n        appliedAdds.push(add);\n      }\n      const deduped = dedupeLinkedFiles(next);\n      const normalized = options.appendStable ? deduped : sortLinkedFiles(deduped);\n      if (normalized.length > 0) {\n        document.metadata.files = normalized;\n      } else {\n        delete document.metadata.files;\n      }\n      return {\n        changedFields: appliedAdds.length > 0 ? [\"files\"] : [],\n        warnings: appliedAdds.length !== discoveredAdds.length ? [`files_discover_skipped_existing:${discoveredAdds.length - appliedAdds.length}`] : [],\n      };\n    },\n  });\n\n  const files = result.item.files ?? [];\n  const addedResolvedKeys = new Set(discoveredAdds.map((entry) => linkedFileResolvedKey(entry, process.cwd())));\n  const added = files.filter((entry) => addedResolvedKeys.has(linkedFileResolvedKey(entry, process.cwd())));\n  return {\n    id: result.item.id,\n    files,\n    changed: added.length > 0,\n    apply: true,\n    count: files.length,\n    candidate_count: candidates.length,\n    addable_count: addableCandidates.length,\n    added_count: added.length,\n    skipped_existing_count: skippedExisting.length,\n    candidates,\n    added,\n    skipped_existing: skippedExisting,\n  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package/dist/cli/commands/gc.js

@@ -1,5 +1,5 @@
 
-!function(){try{var e="undefined"!=typeof window?window:"undefined"!=typeof global?global:"undefined"!=typeof globalThis?globalThis:"undefined"!=typeof self?self:{},n=(new e.Error).stack;n&&(e._sentryDebugIds=e._sentryDebugIds||{},e._sentryDebugIds[n]="94e61b61-a92b-569c-8b0b-9965127795a7")}catch(e){}}();
+!function(){try{var e="undefined"!=typeof window?window:"undefined"!=typeof global?global:"undefined"!=typeof globalThis?globalThis:"undefined"!=typeof self?self:{},n=(new e.Error).stack;n&&(e._sentryDebugIds=e._sentryDebugIds||{},e._sentryDebugIds[n]="4daa69cd-168b-5375-897e-7c642e96582f")}catch(e){}}();
 import fs from "node:fs/promises";
 import path from "node:path";
 import { runActiveOnIndexHooks, runActiveOnReadHooks, runActiveOnWriteHooks } from "../../core/extensions/index.js";
@@ -21,6 +21,16 @@ const GC_TARGETS = [
         relativePath: "search/embeddings.jsonl",
         kind: "file",
     },
+    {
+        scope: "embeddings",
+        relativePath: "search/vectorization-status.json",
+        kind: "file",
+    },
+    {
+        scope: "embeddings",
+        relativePath: "search/lancedb",
+        kind: "directory",
+    },
     {
         scope: "runtime",
         relativePath: "runtime/test-runs",
@@ -109,9 +119,12 @@ function buildGcGuidance(params) {
         guidance.push("Dry-run preview only: no cache artifacts were deleted.");
     }
     const searchScopeSelected = params.scopes.includes("index") || params.scopes.includes("embeddings");
-    const searchArtifactsAffected = params.removed.some((entry) => entry === "index/manifest.json" || entry === "search/embeddings.jsonl");
+    const searchArtifactsAffected = params.removed.some((entry) => entry === "index/manifest.json" ||
+        entry === "search/embeddings.jsonl" ||
+        entry === "search/vectorization-status.json" ||
+        entry === "search/lancedb");
     if (searchScopeSelected && searchArtifactsAffected) {
-        guidance.push('Search artifacts were removed; run "pm reindex --mode keyword" (and "--mode semantic" when semantic search is enabled) before search-heavy workflows.');
+        guidance.push('Search artifacts were removed; run "pm install search-advanced --project" if reindex is unavailable, then "pm reindex --mode keyword" (and "--mode semantic" when semantic search is enabled) before search-heavy workflows.');
     }
     return guidance;
 }
@@ -158,4 +171,4 @@ export async function runGc(global, options = {}) {
     };
 }
 //# sourceMappingURL=gc.js.map
-//# debugId=94e61b61-a92b-569c-8b0b-9965127795a7
+//# debugId=4daa69cd-168b-5375-897e-7c642e96582f

package/dist/cli/commands/gc.js.map

@@ -1 +1 @@
-{"version":3,"file":"gc.js","sources":["cli/commands/gc.ts"],"sourceRoot":"/","sourcesContent":["import fs from \"node:fs/promises\";\nimport path from \"node:path\";\nimport { runActiveOnIndexHooks, runActiveOnReadHooks, runActiveOnWriteHooks } from \"../../core/extensions/index.js\";\nimport { pathExists } from \"../../core/fs/fs-utils.js\";\nimport { EXIT_CODE } from \"../../core/shared/constants.js\";\nimport type { GlobalOptions } from \"../../core/shared/command-types.js\";\nimport { PmCliError } from \"../../core/shared/errors.js\";\nimport { nowIso } from \"../../core/shared/time.js\";\nimport { getSettingsPath, resolvePmRoot } from \"../../core/store/paths.js\";\nimport { readSettings } from \"../../core/store/settings.js\";\n\nconst GC_SCOPE_VALUES = [\"index\", \"embeddings\", \"runtime\"] as const;\ntype GcScope = (typeof GC_SCOPE_VALUES)[number];\n\ninterface GcTarget {\n  scope: GcScope;\n  relativePath: string;\n  kind: \"file\" | \"directory\";\n}\n\nconst GC_TARGETS: readonly GcTarget[] = [\n  {\n    scope: \"index\",\n    relativePath: \"index/manifest.json\",\n    kind: \"file\",\n  },\n  {\n    scope: \"embeddings\",\n    relativePath: \"search/embeddings.jsonl\",\n    kind: \"file\",\n  },\n  {\n    scope: \"runtime\",\n    relativePath: \"runtime/test-runs\",\n    kind: \"directory\",\n  },\n] as const;\n\nexport interface GcCommandOptions {\n  dryRun?: boolean;\n  scope?: string[];\n}\n\nexport interface GcResult {\n  ok: boolean;\n  dry_run: boolean;\n  scope: GcScope[];\n  removed: string[];\n  retained: string[];\n  warnings: string[];\n  guidance: string[];\n  generated_at: string;\n}\n\nfunction isErrno(error: unknown, code: string): boolean {\n  return typeof error === \"object\" && error !== null && \"code\" in error && (error as { code?: string }).code === code;\n}\n\nasync function removeCacheFile(\n  pmRoot: string,\n  target: GcTarget,\n  dryRun: boolean,\n): Promise<{ removed: boolean; warnings: string[] }> {\n  const relativePath = target.relativePath;\n  const absolutePath = path.join(pmRoot, relativePath);\n  const warnings = await runActiveOnReadHooks({\n    path: absolutePath,\n    scope: \"project\",\n  });\n  try {\n    const stats = await fs.stat(absolutePath);\n    if (target.kind === \"file\" && !stats.isFile()) {\n      return {\n        removed: false,\n        warnings: [...warnings, `not_a_file:${relativePath}`],\n      };\n    }\n    if (target.kind === \"directory\" && !stats.isDirectory()) {\n      return {\n        removed: false,\n        warnings: [...warnings, `not_a_directory:${relativePath}`],\n      };\n    }\n    if (dryRun) {\n      return {\n        removed: true,\n        warnings,\n      };\n    }\n    if (target.kind === \"file\") {\n      await fs.unlink(absolutePath);\n    } else {\n      await fs.rm(absolutePath, { recursive: true, force: true });\n    }\n    const writeWarnings = await runActiveOnWriteHooks({\n      path: absolutePath,\n      scope: \"project\",\n      op: \"gc:remove\",\n    });\n    return {\n      removed: true,\n      warnings: [...warnings, ...writeWarnings],\n    };\n  } catch (error: unknown) {\n    if (isErrno(error, \"ENOENT\")) {\n      return {\n        removed: false,\n        warnings,\n      };\n    }\n    throw error;\n  }\n}\n\nfunction parseScopes(raw: string[] | undefined): GcScope[] {\n  if (!raw || raw.length === 0) {\n    return [...GC_SCOPE_VALUES];\n  }\n  const tokens = raw\n    .flatMap((entry) => entry.split(\",\"))\n    .map((entry) => entry.trim().toLowerCase())\n    .filter((entry) => entry.length > 0);\n  if (tokens.length === 0) {\n    throw new PmCliError(`--scope requires at least one value (${GC_SCOPE_VALUES.join(\",\")})`, EXIT_CODE.USAGE);\n  }\n  const resolved = new Set<GcScope>();\n  for (const token of tokens) {\n    if (!(GC_SCOPE_VALUES as readonly string[]).includes(token)) {\n      throw new PmCliError(\n        `Invalid --scope value \"${token}\". 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Expected one or more of: ${GC_SCOPE_VALUES.join(\", \")}`,\n        EXIT_CODE.USAGE,\n      );\n    }\n    resolved.add(token as GcScope);\n  }\n  return GC_SCOPE_VALUES.filter((scope) => resolved.has(scope));\n}\n\nfunction buildGcGuidance(params: {\n  dryRun: boolean;\n  scopes: GcScope[];\n  removed: string[];\n}): string[] {\n  const guidance: string[] = [];\n  if (params.dryRun) {\n    guidance.push(\"Dry-run preview only: no cache artifacts were deleted.\");\n  }\n  const searchScopeSelected = params.scopes.includes(\"index\") || params.scopes.includes(\"embeddings\");\n  const searchArtifactsAffected = params.removed.some(\n    (entry) =>\n      entry === \"index/manifest.json\" ||\n      entry === \"search/embeddings.jsonl\" ||\n      entry === \"search/vectorization-status.json\" ||\n      entry === \"search/lancedb\",\n  );\n  if (searchScopeSelected && searchArtifactsAffected) {\n    guidance.push(\n      'Search artifacts were removed; run \"pm install search-advanced --project\" if reindex is unavailable, then \"pm reindex --mode keyword\" (and \"--mode semantic\" when semantic search is enabled) before search-heavy workflows.',\n    );\n  }\n  return guidance;\n}\n\nexport async function runGc(global: GlobalOptions, options: GcCommandOptions = {}): Promise<GcResult> {\n  const pmRoot = resolvePmRoot(process.cwd(), global.path);\n  if (!(await pathExists(getSettingsPath(pmRoot)))) {\n    throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);\n  }\n\n  await readSettings(pmRoot);\n  const dryRun = options.dryRun === true;\n  const scopes = parseScopes(options.scope);\n  const selectedTargets = GC_TARGETS.filter((target) => scopes.includes(target.scope));\n\n  const removed: string[] = [];\n  const retained: string[] = [];\n  const warnings: string[] = [];\n\n  for (const target of selectedTargets) {\n    const result = await removeCacheFile(pmRoot, target, dryRun);\n    if (result.removed) {\n      removed.push(target.relativePath);\n    } else {\n      retained.push(target.relativePath);\n    }\n    warnings.push(...result.warnings);\n  }\n  warnings.push(\n    ...(await runActiveOnIndexHooks({\n      mode: dryRun ? \"gc:dry-run\" : \"gc\",\n      total_items: selectedTargets.length,\n    })),\n  );\n  const guidance = buildGcGuidance({\n    dryRun,\n    scopes,\n    removed,\n  });\n\n  return {\n    ok: warnings.length === 0,\n    dry_run: dryRun,\n    scope: scopes,\n    removed,\n    retained,\n    warnings,\n    guidance,\n    generated_at: nowIso(),\n  };\n}\n"],"names":[],"mappings":";;AAAA,OAAO,EAAE,MAAM,kBAAkB,CAAC;AAClC,OAAO,IAAI,MAAM,WAAW,CAAC;AAC7B,OAAO,EAAE,qBAAqB,EAAE,oBAAoB,EAAE,qBAAqB,EAAE,MAAM,gCAAgC,CAAC;AACpH,OAAO,EAAE,UAAU,EAAE,MAAM,2BAA2B,CAAC;AACvD,OAAO,EAAE,SAAS,EAAE,MAAM,gCAAgC,CAAC;AAE3D,OAAO,EAAE,UAAU,EAAE,MAAM,6BAA6B,CAAC;AACzD,OAAO,EAAE,MAAM,EAAE,MAAM,2BAA2B,CAAC;AACnD,OAAO,EAAE,eAAe,EAAE,aAAa,EAAE,MAAM,2BAA2B,CAAC;AAC3E,OAAO,EAAE,YAAY,EAAE,MAAM,8BAA8B,CAAC;AAE5D,MAAM,eAAe,GAAG,CAAC,OAAO,EAAE,YAAY,EAAE,SAAS,CAAU,CAAC;AASpE,MAAM,UAAU,GAAwB;IACtC;QACE,KAAK,EAAE,OAAO;QACd,YAAY,EAAE,qBAAqB;QACnC,IAAI,EAAE,MAAM;KACb;IACD;QACE,KAAK,EAAE,YAAY;QACnB,YAAY,EAAE,yBAAyB;QACvC,IAAI,EAAE,MAAM;KACb;IACD;QACE,KAAK,EAAE,YAAY;QACnB,YAAY,EAAE,kCAAkC;QAChD,IAAI,EAAE,MAAM;KACb;IACD;QACE,KAAK,EAAE,YAAY;QACnB,YAAY,EAAE,gBAAgB;QAC9B,IAAI,EAAE,WAAW;KAClB;IACD;QACE,KAAK,EAAE,SAAS;QAChB,YAAY,EAAE,mBAAmB;QACjC,IAAI,EAAE,WAAW;KAClB;CACO,CAAC;AAkBX,SAAS,OAAO,CAAC,KAAc,EAAE,IAAY;IAC3C,OAAO,OAAO,KAAK,KAAK,QAAQ,IAAI,KAAK,KAAK,IAAI,IAAI,MAAM,IAAI,KAAK,IAAK,KAA2B,CAAC,IAAI,KAAK,IAAI,CAAC;AACtH,CAAC;AAED,KAAK,UAAU,eAAe,CAC5B,MAAc,EACd,MAAgB,EAChB,MAAe;IAEf,MAAM,YAAY,GAAG,MAAM,CAAC,YAAY,CAAC;IACzC,MAAM,YAAY,GAAG,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE,YAAY,CAAC,CAAC;IACrD,MAAM,QAAQ,GAAG,MAAM,oBAAoB,CAAC;QAC1C,IAAI,EAAE,YAAY;QAClB,KAAK,EAAE,SAAS;KACjB,CAAC,CAAC;IACH,IAAI,CAAC;QACH,MAAM,KAAK,GAAG,MAAM,EAAE,CAAC,IAAI,CAAC,YAAY,CAAC,CAAC;QAC1C,IAAI,MAAM,CAAC,IAAI,KAAK,MAAM,IAAI,CAAC,KAAK,CAAC,MAAM,EAAE,EAAE,CAAC;YAC9C,OAAO;gBACL,OAAO,EAAE,KAAK;gBACd,QAAQ,EAAE,CAAC,GAAG,QAAQ,EAAE,cAAc,YAAY,EAAE,CAAC;aACtD,CAAC;QACJ,CAAC;QACD,IAAI,MAAM,CAAC,IAAI,KAAK,WAAW,IAAI,CAAC,KAAK,CAAC,WAAW,EAAE,EAAE,CAAC;YACxD,OAAO;gBACL,OAAO,EAAE,KAAK;gBACd,QAAQ,EAAE,CAAC,GAAG,QAAQ,EAAE,mBAAmB,YAAY,EAAE,CAAC;aAC3D,CAAC;QACJ,CAAC;QACD,IAAI,MAAM,EAAE,CAAC;YACX,OAAO;gBACL,OAAO,EAAE,IAAI;gBACb,QAAQ;aACT,CAAC;QACJ,CAAC;QACD,IAAI,MAAM,CAAC,IAAI,KAAK,MAAM,EAAE,CAAC;YAC3B,MAAM,EAAE,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;QAChC,CAAC;aAAM,CAAC;YACN,MAAM,EAAE,CAAC,EAAE,CAAC,YAAY,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC,CAAC;QAC9D,CAAC;QACD,MAAM,aAAa,GAAG,MAAM,qBAAqB,CAAC;YAChD,IAAI,EAAE,YAAY;YAClB,KAAK,EAAE,SAAS;YAChB,EAAE,EAAE,WAAW;SAChB,CAAC,CAAC;QACH,OAAO;YACL,OAAO,EAAE,IAAI;YACb,QAAQ,EAAE,CAAC,GAAG,QAAQ,EAAE,GAAG,aAAa,CAAC;SAC1C,CAAC;IACJ,CAAC;IAAC,OAAO,KAAc,EAAE,CAAC;QACxB,IAAI,OAAO,CAAC,KAAK,EAAE,QAAQ,CAAC,EAAE,CAAC;YAC7B,OAAO;gBACL,OAAO,EAAE,KAAK;gBACd,QAAQ;aACT,CAAC;QACJ,CAAC;QACD,MAAM,KAAK,CAAC;IACd,CAAC;AACH,CAAC;AAED,SAAS,WAAW,CAAC,GAAyB;IAC5C,IAAI,CAAC,GAAG,IAAI,GAAG,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QAC7B,OAAO,CAAC,GAAG,eAAe,CAAC,CAAC;IAC9B,CAAC;IACD,MAAM,MAAM,GAAG,GAAG;SACf,OAAO,CAAC,CAAC,KAAK,EAAE,EAAE,CAAC,KAAK,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC;SACpC,GAAG,CAAC,CAAC,KAAK,EAAE,EAAE,CAAC,KAAK,CAAC,IAAI,EAAE,CAAC,WAAW,EAAE,CAAC;SAC1C,MAAM,CAAC,CAAC,KAAK,EAAE,EAAE,CAAC,KAAK,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC;IACvC,IAAI,MAAM,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACxB,MAAM,IAAI,UAAU,CAAC,wCAAwC,eAAe,CAAC,IAAI,CAAC,GAAG,CAAC,GAAG,EAAE,SAAS,CAAC,KAAK,CAAC,CAAC;IAC9G,CAAC;IACD,MAAM,QAAQ,GAAG,IAAI,GAAG,EAAW,CAAC;IACpC,KAAK,MAAM,KAAK,IAAI,MAAM,EAAE,CAAC;QAC3B,IAAI,CAAE,eAAqC,CAAC,QAAQ,CAAC,KAAK,CAAC,EAAE,CAAC;YAC5D,MAAM,IAAI,UAAU,CAClB,0BAA0B,KAAK,+BAA+B,eAAe,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,EAC1F,SAAS,CAAC,KAAK,CAChB,CAAC;QACJ,CAAC;QACD,QAAQ,CAAC,GAAG,CAAC,KAAgB,CAAC,CAAC;IACjC,CAAC;IACD,OAAO,eAAe,CAAC,MAAM,CAAC,CAAC,KAAK,EAAE,EAAE,CAAC,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC;AAChE,CAAC;AAED,SAAS,eAAe,CAAC,MAIxB;IACC,MAAM,QAAQ,GAAa,EAAE,CAAC;IAC9B,IAAI,MAAM,CAAC,MAAM,EAAE,CAAC;QAClB,QAAQ,CAAC,IAAI,CAAC,wDAAwD,CAAC,CAAC;IAC1E,CAAC;IACD,MAAM,mBAAmB,GAAG,MAAM,CAAC,MAAM,CAAC,QAAQ,CAAC,OAAO,CAAC,IAAI,MAAM,CAAC,MAAM,CAAC,QAAQ,CAAC,YAAY,CAAC,CAAC;IACpG,MAAM,uBAAuB,GAAG,MAAM,CAAC,OAAO,CAAC,IAAI,CACjD,CAAC,KAAK,EAAE,EAAE,CACR,KAAK,KAAK,qBAAqB;QAC/B,KAAK,KAAK,yBAAyB;QACnC,KAAK,KAAK,kCAAkC;QAC5C,KAAK,KAAK,gBAAgB,CAC7B,CAAC;IACF,IAAI,mBAAmB,IAAI,uBAAuB,EAAE,CAAC;QACnD,QAAQ,CAAC,IAAI,CACX,8NAA8N,CAC/N,CAAC;IACJ,CAAC;IACD,OAAO,QAAQ,CAAC;AAClB,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,KAAK,CAAC,MAAqB,EAAE,UAA4B,EAAE;IAC/E,MAAM,MAAM,GAAG,aAAa,CAAC,OAAO,CAAC,GAAG,EAAE,EAAE,MAAM,CAAC,IAAI,CAAC,CAAC;IACzD,IAAI,CAAC,CAAC,MAAM,UAAU,CAAC,eAAe,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC;QACjD,MAAM,IAAI,UAAU,CAAC,iCAAiC,MAAM,sBAAsB,EAAE,SAAS,CAAC,SAAS,CAAC,CAAC;IAC3G,CAAC;IAED,MAAM,YAAY,CAAC,MAAM,CAAC,CAAC;IAC3B,MAAM,MAAM,GAAG,OAAO,CAAC,MAAM,KAAK,IAAI,CAAC;IACvC,MAAM,MAAM,GAAG,WAAW,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC;IAC1C,MAAM,eAAe,GAAG,UAAU,CAAC,MAAM,CAAC,CAAC,MAAM,EAAE,EAAE,CAAC,MAAM,CAAC,QAAQ,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC;IAErF,MAAM,OAAO,GAAa,EAAE,CAAC;IAC7B,MAAM,QAAQ,GAAa,EAAE,CAAC;IAC9B,MAAM,QAAQ,GAAa,EAAE,CAAC;IAE9B,KAAK,MAAM,MAAM,IAAI,eAAe,EAAE,CAAC;QACrC,MAAM,MAAM,GAAG,MAAM,eAAe,CAAC,MAAM,EAAE,MAAM,EAAE,MAAM,CAAC,CAAC;QAC7D,IAAI,MAAM,CAAC,OAAO,EAAE,CAAC;YACnB,OAAO,CAAC,IAAI,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;QACpC,CAAC;aAAM,CAAC;YACN,QAAQ,CAAC,IAAI,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;QACrC,CAAC;QACD,QAAQ,CAAC,IAAI,CAAC,GAAG,MAAM,CAAC,QAAQ,CAAC,CAAC;IACpC,CAAC;IACD,QAAQ,CAAC,IAAI,CAC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package/dist/cli/commands/get.d.ts

@@ -13,8 +13,8 @@ interface ClaimStateContext {
 }
 export interface GetResult {
     item: Partial<ItemFrontMatter>;
-    body: string;
-    linked: {
+    body?: string;
+    linked?: {
         files: LinkedFile[];
         tests: LinkedTest[];
         docs: LinkedDoc[];
@@ -24,6 +24,7 @@ export interface GetResult {
 export interface GetOptions {
     depth?: string;
     fields?: string;
+    full?: boolean;
 }
 export declare function runGet(id: string, global: GlobalOptions, options?: GetOptions): Promise<GetResult>;
 export {};

package/dist/cli/commands/get.js

@@ -1,9 +1,10 @@
 
-!function(){try{var e="undefined"!=typeof window?window:"undefined"!=typeof global?global:"undefined"!=typeof globalThis?globalThis:"undefined"!=typeof self?self:{},n=(new e.Error).stack;n&&(e._sentryDebugIds=e._sentryDebugIds||{},e._sentryDebugIds[n]="388677b4-ec99-5da9-9bb6-8bba5280f669")}catch(e){}}();
+!function(){try{var e="undefined"!=typeof window?window:"undefined"!=typeof global?global:"undefined"!=typeof globalThis?globalThis:"undefined"!=typeof self?self:{},n=(new e.Error).stack;n&&(e._sentryDebugIds=e._sentryDebugIds||{},e._sentryDebugIds[n]="09364085-fc2b-5c0f-95cb-0dafd66220d4")}catch(e){}}();
 import { pathExists } from "../../core/fs/fs-utils.js";
 import { getActiveExtensionRegistrations } from "../../core/extensions/index.js";
 import { resolveItemTypeRegistry } from "../../core/item/type-registry.js";
-import { EXIT_CODE } from "../../core/shared/constants.js";
+import { resolveRuntimeFieldRegistry } from "../../core/schema/runtime-schema.js";
+import { EXIT_CODE, FRONT_MATTER_KEY_ORDER } from "../../core/shared/constants.js";
 import { PmCliError } from "../../core/shared/errors.js";
 import { buildItemNotFoundError, locateItem, readLocatedItem } from "../../core/store/item-store.js";
 import { getHistoryPath, getSettingsPath, resolvePmRoot } from "../../core/store/paths.js";
@@ -59,6 +60,35 @@ function parseGetFields(raw) {
     }
     return fields;
 }
+function normalizeGetField(field) {
+    return field.startsWith("item.") ? field.slice("item.".length) : field;
+}
+function validateGetFields(fields, runtimeMetadataKeys) {
+    if (fields === null) {
+        return;
+    }
+    const itemFields = new Set([...FRONT_MATTER_KEY_ORDER, ...runtimeMetadataKeys]);
+    const allowedRootFields = new Set(["body", "linked", "claim_state"]);
+    const allowedLinkedFields = new Set(["linked.files", "linked.tests", "linked.docs"]);
+    const allowedClaimStateFields = new Set(["claim_state.claimed", "claim_state.assignee", "claim_state.last_claim", "claim_state.last_release"]);
+    const unknown = fields.filter((field) => {
+        const normalized = normalizeGetField(field);
+        return (!itemFields.has(normalized) &&
+            !allowedRootFields.has(normalized) &&
+            !allowedLinkedFields.has(normalized) &&
+            !allowedClaimStateFields.has(normalized));
+    });
+    if (unknown.length > 0) {
+        throw new PmCliError(`Unknown get --fields value(s): ${unknown.join(", ")}`, EXIT_CODE.USAGE, {
+            code: "unknown_field_projection",
+            examples: [
+                "pm get <id> --fields id,title,status,type,updated_at",
+                "pm get <id> --fields id,title,claim_state",
+                "pm get <id> --fields id,title,body,linked.files",
+            ],
+        });
+    }
+}
 function projectItemForFields(item, fields) {
     const source = item;
     const projected = {};
@@ -78,7 +108,10 @@ function fieldsIncludeRoot(fields, name) {
     return fields.some((field) => field === name || field.startsWith(`${name}.`));
 }
 export async function runGet(id, global, options = {}) {
-    const depth = parseGetDepth(options.depth);
+    if (options.full && (options.fields !== undefined || options.depth !== undefined)) {
+        throw new PmCliError("Get projection options are mutually exclusive; remove the extra projection flag and retry.", EXIT_CODE.USAGE);
+    }
+    const depth = options.full ? "deep" : parseGetDepth(options.depth);
     const fields = parseGetFields(options.fields);
     const pmRoot = resolvePmRoot(process.cwd(), global.path);
     if (!(await pathExists(getSettingsPath(pmRoot)))) {
@@ -91,6 +124,11 @@ export async function runGet(id, global, options = {}) {
         throw await buildItemNotFoundError(pmRoot, id, settings.id_prefix, typeRegistry.type_to_folder);
     }
     const loaded = await readLocatedItem(located, { schema: settings.schema });
+    const runtimeMetadataKeys = [];
+    for (const field of resolveRuntimeFieldRegistry(settings.schema).definitions) {
+        runtimeMetadataKeys.push(field.metadata_key);
+    }
+    validateGetFields(fields, runtimeMetadataKeys);
     const files = loaded.document.metadata.files ?? [];
     const tests = loaded.document.metadata.tests ?? [];
     const docs = loaded.document.metadata.docs ?? [];
@@ -117,17 +155,21 @@ export async function runGet(id, global, options = {}) {
         item: fieldProjection
             ? projectItemForFields(loaded.document.metadata, fields)
             : projectItemForDepth(loaded.document.metadata, depth),
-        body: includeBody ? loaded.document.body : "",
-        linked: {
+    };
+    if (!fieldProjection || includeBody) {
+        result.body = includeBody ? loaded.document.body : "";
+    }
+    if (!fieldProjection || includeLinked || includeLinkedFiles || includeLinkedTests || includeLinkedDocs) {
+        result.linked = {
             files: includeLinkedFiles ? files : [],
             tests: includeLinkedTests ? tests : [],
             docs: includeLinkedDocs ? docs : [],
-        },
-    };
+        };
+    }
     if (claimState) {
         result.claim_state = claimState;
     }
     return result;
 }
 //# sourceMappingURL=get.js.map
-//# debugId=388677b4-ec99-5da9-9bb6-8bba5280f669
+//# debugId=09364085-fc2b-5c0f-95cb-0dafd66220d4

package/dist/cli/commands/get.js.map

@@ -1 +1 @@
-{"version":3,"file":"get.js","sources":["cli/commands/get.ts"],"sourceRoot":"/","sourcesContent":["import { pathExists } from \"../../core/fs/fs-utils.js\";\nimport { getActiveExtensionRegistrations } from \"../../core/extensions/index.js\";\nimport { resolveItemTypeRegistry } from \"../../core/item/type-registry.js\";\nimport { EXIT_CODE } from \"../../core/shared/constants.js\";\nimport type { GlobalOptions } from \"../../core/shared/command-types.js\";\nimport { PmCliError } from \"../../core/shared/errors.js\";\nimport { buildItemNotFoundError, locateItem, readLocatedItem } from \"../../core/store/item-store.js\";\nimport { getHistoryPath, getSettingsPath, resolvePmRoot } from \"../../core/store/paths.js\";\nimport { readSettings } from \"../../core/store/settings.js\";\nimport type { ItemFrontMatter, LinkedDoc, LinkedFile, LinkedTest } from \"../../types/index.js\";\nimport { readHistoryEntries } from \"./history.js\";\n\ninterface ClaimHistoryContext {\n  ts: string;\n  author: string;\n  message: string | null;\n}\n\ninterface ClaimHistoryEntry {\n  op: string;\n  ts: string;\n  author: string;\n  message?: string;\n}\n\ninterface ClaimStateContext {\n  claimed: boolean;\n  assignee: string | null;\n  last_claim: ClaimHistoryContext | null;\n  last_release: ClaimHistoryContext | null;\n}\n\nexport interface GetResult {\n  item: Partial<ItemFrontMatter>;\n  body: string;\n  linked: {\n    files: LinkedFile[];\n    tests: LinkedTest[];\n    docs: LinkedDoc[];\n  };\n  claim_state?: ClaimStateContext;\n}\n\nconst GET_DEPTH_VALUES = [\"brief\", \"standard\", \"deep\"] as const;\n\ntype GetDepth = (typeof GET_DEPTH_VALUES)[number];\n\nexport interface GetOptions {\n  depth?: string;\n  fields?: string;\n}\n\nfunction toClaimHistoryContext(\n  entry: ClaimHistoryEntry,\n): ClaimHistoryContext {\n  return {\n    ts: entry.ts,\n    author: entry.author,\n    message: entry.message ?? null,\n  };\n}\n\nfunction resolveClaimStateContext(\n  assigneeValue: string | undefined,\n  history: ClaimHistoryEntry[],\n): ClaimStateContext {\n  const assignee = assigneeValue?.trim();\n  const normalizedAssignee = assignee && assignee.length > 0 ? assignee : null;\n  const lastClaim = [...history].reverse().find((entry) => entry.op === \"claim\");\n  const lastRelease = [...history].reverse().find((entry) => entry.op === \"release\");\n  return {\n    claimed: normalizedAssignee !== null,\n    assignee: normalizedAssignee,\n    last_claim: lastClaim ? toClaimHistoryContext(lastClaim) : null,\n    last_release: lastRelease ? toClaimHistoryContext(lastRelease) : null,\n  };\n}\n\nfunction parseGetDepth(raw: string | undefined): GetDepth {\n  if (raw === undefined || raw.trim().length === 0) {\n    return \"deep\";\n  }\n  const normalized = raw.trim().toLowerCase();\n  if (GET_DEPTH_VALUES.includes(normalized as GetDepth)) {\n    return normalized as GetDepth;\n  }\n  throw new PmCliError(\"Get --depth must be one of brief|standard|deep\", EXIT_CODE.USAGE);\n}\n\nfunction projectItemForDepth(item: ItemFrontMatter, depth: GetDepth): Partial<ItemFrontMatter> {\n  if (depth === \"deep\") {\n    return item;\n  }\n  const {\n    comments: _comments,\n    notes: _notes,\n    learnings: _learnings,\n    files: _files,\n    tests: _tests,\n    docs: _docs,\n    reminders: _reminders,\n    events: _events,\n    ...projected\n  } = item;\n  return projected;\n}\n\nfunction parseGetFields(raw: string | undefined): string[] | null {\n  if (raw === undefined) {\n    return null;\n  }\n  const fields = raw\n    .split(\",\")\n    .map((entry) => entry.trim())\n    .filter((entry) => entry.length > 0);\n  if (fields.length === 0) {\n    throw new PmCliError(\"Get --fields requires a comma-separated list of field names\", EXIT_CODE.USAGE);\n  }\n  return fields;\n}\n\nfunction projectItemForFields(item: ItemFrontMatter, fields: string[]): Partial<ItemFrontMatter> {\n  const source = item as unknown as Record<string, unknown>;\n  const projected: Record<string, unknown> = {};\n  for (const field of fields) {\n    const normalized = field.startsWith(\"item.\") ? field.slice(\"item.\".length) : field;\n    if (normalized === \"body\" || normalized === \"linked\" || normalized.startsWith(\"linked.\")) {\n      continue;\n    }\n    projected[normalized] = source[normalized];\n  }\n  return projected as Partial<ItemFrontMatter>;\n}\n\nfunction fieldsInclude(fields: string[] | null, name: string): boolean {\n  return fields?.some((field) => field === name || field === `item.${name}`) ?? false;\n}\n\nfunction fieldsIncludeRoot(fields: string[], name: string): boolean {\n  return fields.some((field) => field === name || field.startsWith(`${name}.`));\n}\n\nexport async function runGet(id: string, global: GlobalOptions, options: GetOptions = {}): Promise<GetResult> {\n  const depth = parseGetDepth(options.depth);\n  const fields = parseGetFields(options.fields);\n  const pmRoot = resolvePmRoot(process.cwd(), global.path);\n  if (!(await pathExists(getSettingsPath(pmRoot)))) {\n    throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);\n  }\n  const settings = await readSettings(pmRoot);\n  const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());\n  const located = await locateItem(pmRoot, id, settings.id_prefix, settings.item_format, typeRegistry.type_to_folder);\n  if (!located) {\n    throw await buildItemNotFoundError(pmRoot, id, settings.id_prefix, typeRegistry.type_to_folder);\n  }\n  const loaded = await readLocatedItem(located, { schema: settings.schema });\n  const files = loaded.document.metadata.files ?? [];\n  const tests = loaded.document.metadata.tests ?? [];\n  const docs = loaded.document.metadata.docs ?? 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null,\n  };\n}\n\nfunction resolveClaimStateContext(\n  assigneeValue: string | undefined,\n  history: ClaimHistoryEntry[],\n): ClaimStateContext {\n  const assignee = assigneeValue?.trim();\n  const normalizedAssignee = assignee && assignee.length > 0 ? assignee : null;\n  const lastClaim = [...history].reverse().find((entry) => entry.op === \"claim\");\n  const lastRelease = [...history].reverse().find((entry) => entry.op === \"release\");\n  return {\n    claimed: normalizedAssignee !== null,\n    assignee: normalizedAssignee,\n    last_claim: lastClaim ? toClaimHistoryContext(lastClaim) : null,\n    last_release: lastRelease ? toClaimHistoryContext(lastRelease) : null,\n  };\n}\n\nfunction parseGetDepth(raw: string | undefined): GetDepth {\n  if (raw === undefined || raw.trim().length === 0) {\n    return \"deep\";\n  }\n  const normalized = raw.trim().toLowerCase();\n  if (GET_DEPTH_VALUES.includes(normalized as GetDepth)) {\n    return normalized as GetDepth;\n  }\n  throw new PmCliError(\"Get --depth must be one of brief|standard|deep\", EXIT_CODE.USAGE);\n}\n\nfunction projectItemForDepth(item: ItemFrontMatter, depth: GetDepth): Partial<ItemFrontMatter> {\n  if (depth === \"deep\") {\n    return item;\n  }\n  const {\n    comments: _comments,\n    notes: _notes,\n    learnings: _learnings,\n    files: _files,\n    tests: _tests,\n    docs: _docs,\n    reminders: _reminders,\n    events: _events,\n    ...projected\n  } = item;\n  return projected;\n}\n\nfunction parseGetFields(raw: string | undefined): string[] | null {\n  if (raw === undefined) {\n    return null;\n  }\n  const fields = raw\n    .split(\",\")\n    .map((entry) => entry.trim())\n    .filter((entry) => entry.length > 0);\n  if (fields.length === 0) {\n    throw new PmCliError(\"Get --fields requires a comma-separated list of field names\", EXIT_CODE.USAGE);\n  }\n  return fields;\n}\n\nfunction normalizeGetField(field: string): string {\n  return field.startsWith(\"item.\") ? field.slice(\"item.\".length) : field;\n}\n\nfunction validateGetFields(fields: string[] | null, runtimeMetadataKeys: Iterable<string>): void {\n  if (fields === null) {\n    return;\n  }\n  const itemFields = new Set([...FRONT_MATTER_KEY_ORDER, ...runtimeMetadataKeys]);\n  const allowedRootFields = new Set([\"body\", \"linked\", \"claim_state\"]);\n  const allowedLinkedFields = new Set([\"linked.files\", \"linked.tests\", \"linked.docs\"]);\n  const allowedClaimStateFields = new Set([\"claim_state.claimed\", \"claim_state.assignee\", \"claim_state.last_claim\", \"claim_state.last_release\"]);\n  const unknown = fields.filter((field) => {\n    const normalized = normalizeGetField(field);\n    return (\n      !itemFields.has(normalized) &&\n      !allowedRootFields.has(normalized) &&\n      !allowedLinkedFields.has(normalized) &&\n      !allowedClaimStateFields.has(normalized)\n    );\n  });\n  if (unknown.length > 0) {\n    throw new PmCliError(`Unknown get --fields value(s): ${unknown.join(\", \")}`, EXIT_CODE.USAGE, {\n      code: \"unknown_field_projection\",\n      examples: [\n        \"pm get <id> --fields id,title,status,type,updated_at\",\n        \"pm get <id> --fields id,title,claim_state\",\n        \"pm get <id> --fields id,title,body,linked.files\",\n      ],\n    });\n  }\n}\n\nfunction projectItemForFields(item: ItemFrontMatter, fields: string[]): Partial<ItemFrontMatter> {\n  const source = item as unknown as Record<string, unknown>;\n  const projected: Record<string, unknown> = {};\n  for (const field of fields) {\n    const normalized = field.startsWith(\"item.\") ? 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Run pm init first.`, EXIT_CODE.NOT_FOUND);\n  }\n  const settings = await readSettings(pmRoot);\n  const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());\n  const located = await locateItem(pmRoot, id, settings.id_prefix, settings.item_format, typeRegistry.type_to_folder);\n  if (!located) {\n    throw await buildItemNotFoundError(pmRoot, id, settings.id_prefix, typeRegistry.type_to_folder);\n  }\n  const loaded = await readLocatedItem(located, { schema: settings.schema });\n  const runtimeMetadataKeys: string[] = [];\n  for (const field of resolveRuntimeFieldRegistry(settings.schema).definitions) {\n    runtimeMetadataKeys.push(field.metadata_key);\n  }\n  validateGetFields(fields, runtimeMetadataKeys);\n  const files = loaded.document.metadata.files ?? [];\n  const tests = loaded.document.metadata.tests ?? [];\n  const docs = loaded.document.metadata.docs ?? 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package/dist/cli/commands/health.d.ts

@@ -8,7 +8,15 @@ export interface HealthCheck {
 export interface HealthResult {
     ok: boolean;
     checks: HealthCheck[];
+    warning_count?: number;
     warnings: string[];
+    projection?: {
+        mode: "brief" | "summary" | "full";
+        warning_count: number;
+        warnings_truncated: boolean;
+        detail_limit: number;
+        omitted_checks?: HealthCheck["name"][];
+    };
     generated_at: string;
 }
 export interface RunHealthOptions {
@@ -22,6 +30,8 @@ export interface RunHealthOptions {
     skipIntegrity?: boolean;
     skipDrift?: boolean;
     full?: boolean;
+    brief?: boolean;
+    summary?: boolean;
 }
 export declare function runHealth(global: GlobalOptions, options?: RunHealthOptions): Promise<HealthResult>;
 export {};