@unbrained/pm-cli 2026.5.11 → 2026.5.14

package/dist/cli/commands/index.d.ts

@@ -1,21 +1,16 @@
 export { runAppend } from "./append.js";
 export { runAggregate, type AggregateOptions, type AggregateResult } from "./aggregate.js";
-export { runCompletion, type CompletionResult, type CompletionShell } from "./completion.js";
 export { runActivity } from "./activity.js";
 export { runClaim, runRelease } from "./claim.js";
 export { runClose, type CloseCommandOptions, type CloseResult } from "./close.js";
 export { runComments } from "./comments.js";
-export { runCommentsAudit, type CommentsAuditOptions, type CommentsAuditResult } from "./comments-audit.js";
 export { runConfig, type ConfigCommandOptions, type ConfigResult } from "./config.js";
 export { runContracts, type ContractsCommandOptions, type ContractsResult } from "./contracts.js";
-export { CALENDAR_OUTPUT_VALUES, CALENDAR_VIEW_VALUES, renderCalendarMarkdown, resolveCalendarOutputFormat, runCalendar, type CalendarOptions, type CalendarOutputFormat, type CalendarResult, type CalendarView, } from "./calendar.js";
 export { CONTEXT_OUTPUT_VALUES, renderContextMarkdown, resolveContextOutputFormat, runContext, type ContextOptions, type ContextOutputFormat, type ContextResult, } from "./context.js";
 export { runCreate, type CreateCommandOptions } from "./create.js";
 export { runDelete, type DeleteCommandOptions, type DeleteResult } from "./delete.js";
 export { runDeps, DEPS_FORMAT_VALUES, type DepsCommandOptions, type DepsFormat, type DepsResult } from "./deps.js";
-export { runDedupeAudit, DEDUPE_AUDIT_MODES, type DedupeAuditMode, type DedupeAuditOptions, type DedupeAuditResult } from "./dedupe-audit.js";
 export { runDocs } from "./docs.js";
-export { GUIDE_DEPTH_VALUES, GUIDE_OUTPUT_VALUES, renderGuideMarkdown, resolveGuideOutputFormat, runGuide, type GuideDepth, type GuideOptions, type GuideOutputFormat, type GuideResult, } from "./guide.js";
 export { runExtension, type ExtensionCommandOptions, type ExtensionCommandResult } from "./extension.js";
 export { runFiles, runFilesDiscover } from "./files.js";
 export { runGc } from "./gc.js";
@@ -25,16 +20,14 @@ export { runHistory } from "./history.js";
 export { runInit } from "./init.js";
 export { runLearnings } from "./learnings.js";
 export { runList, type ListOptions } from "./list.js";
-export { runNormalize, type NormalizeCommandOptions, type NormalizeResult } from "./normalize.js";
 export { runNotes } from "./notes.js";
 export { runSearch } from "./search.js";
-export { runReindex, type ReindexOptions, type ReindexResult } from "./reindex.js";
 export { runRestore } from "./restore.js";
 export { runStats } from "./stats.js";
 export { runTest } from "./test.js";
 export { runTestAll } from "./test-all.js";
 export { runStartBackgroundRun, runTestRunsList, runTestRunsLogs, runTestRunsResume, runTestRunsStatus, runTestRunsStop, runTestRunsWorker, } from "./test-runs.js";
-export { loadCreateTemplateOptions, runTemplatesList, runTemplatesSave, runTemplatesShow, type TemplatesListResult, type TemplatesSaveResult, type TemplatesShowResult, } from "./templates.js";
 export { runUpdate } from "./update.js";
 export { runUpdateMany, type UpdateManyCommandOptions, type UpdateManyResult } from "./update-many.js";
+export { runUpgrade, type UpgradeCommandOptions, type UpgradeResult } from "./upgrade.js";
 export { runValidate, type ValidateCheck, type ValidateCommandOptions, type ValidateResult } from "./validate.js";

package/dist/cli/commands/index.js

@@ -1,21 +1,16 @@
 export { runAppend } from "./append.js";
 export { runAggregate } from "./aggregate.js";
-export { runCompletion } from "./completion.js";
 export { runActivity } from "./activity.js";
 export { runClaim, runRelease } from "./claim.js";
 export { runClose } from "./close.js";
 export { runComments } from "./comments.js";
-export { runCommentsAudit } from "./comments-audit.js";
 export { runConfig } from "./config.js";
 export { runContracts } from "./contracts.js";
-export { CALENDAR_OUTPUT_VALUES, CALENDAR_VIEW_VALUES, renderCalendarMarkdown, resolveCalendarOutputFormat, runCalendar, } from "./calendar.js";
 export { CONTEXT_OUTPUT_VALUES, renderContextMarkdown, resolveContextOutputFormat, runContext, } from "./context.js";
 export { runCreate } from "./create.js";
 export { runDelete } from "./delete.js";
 export { runDeps, DEPS_FORMAT_VALUES } from "./deps.js";
-export { runDedupeAudit, DEDUPE_AUDIT_MODES } from "./dedupe-audit.js";
 export { runDocs } from "./docs.js";
-export { GUIDE_DEPTH_VALUES, GUIDE_OUTPUT_VALUES, renderGuideMarkdown, resolveGuideOutputFormat, runGuide, } from "./guide.js";
 export { runExtension } from "./extension.js";
 export { runFiles, runFilesDiscover } from "./files.js";
 export { runGc } from "./gc.js";
@@ -25,17 +20,15 @@ export { runHistory } from "./history.js";
 export { runInit } from "./init.js";
 export { runLearnings } from "./learnings.js";
 export { runList } from "./list.js";
-export { runNormalize } from "./normalize.js";
 export { runNotes } from "./notes.js";
 export { runSearch } from "./search.js";
-export { runReindex } from "./reindex.js";
 export { runRestore } from "./restore.js";
 export { runStats } from "./stats.js";
 export { runTest } from "./test.js";
 export { runTestAll } from "./test-all.js";
 export { runStartBackgroundRun, runTestRunsList, runTestRunsLogs, runTestRunsResume, runTestRunsStatus, runTestRunsStop, runTestRunsWorker, } from "./test-runs.js";
-export { loadCreateTemplateOptions, runTemplatesList, runTemplatesSave, runTemplatesShow, } from "./templates.js";
 export { runUpdate } from "./update.js";
 export { runUpdateMany } from "./update-many.js";
+export { runUpgrade } from "./upgrade.js";
 export { runValidate } from "./validate.js";
 //# sourceMappingURL=index.js.map

package/dist/cli/commands/index.js.map

@@ -1 +1 @@
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{ runAppend } from \"./append.js\";\nexport { runAggregate, type AggregateOptions, type AggregateResult } from \"./aggregate.js\";\nexport { runCompletion, type CompletionResult, type CompletionShell } from \"./completion.js\";\nexport { runActivity } from \"./activity.js\";\nexport { runClaim, runRelease } from \"./claim.js\";\nexport { runClose, type CloseCommandOptions, type CloseResult } from \"./close.js\";\nexport { runComments } from \"./comments.js\";\nexport { runCommentsAudit, type CommentsAuditOptions, type CommentsAuditResult } from \"./comments-audit.js\";\nexport { runConfig, type ConfigCommandOptions, type ConfigResult } from \"./config.js\";\nexport { runContracts, type ContractsCommandOptions, type ContractsResult } from \"./contracts.js\";\nexport {\n  CALENDAR_OUTPUT_VALUES,\n  CALENDAR_VIEW_VALUES,\n  renderCalendarMarkdown,\n  resolveCalendarOutputFormat,\n  runCalendar,\n  type CalendarOptions,\n  type CalendarOutputFormat,\n  type CalendarResult,\n  type CalendarView,\n} from \"./calendar.js\";\nexport {\n  CONTEXT_OUTPUT_VALUES,\n  renderContextMarkdown,\n  resolveContextOutputFormat,\n  runContext,\n  type ContextOptions,\n  type ContextOutputFormat,\n  type ContextResult,\n} from \"./context.js\";\nexport { runCreate, type CreateCommandOptions } from \"./create.js\";\nexport { runDelete, type DeleteCommandOptions, type DeleteResult } from \"./delete.js\";\nexport { runDeps, DEPS_FORMAT_VALUES, type DepsCommandOptions, type DepsFormat, type DepsResult } from \"./deps.js\";\nexport { runDedupeAudit, DEDUPE_AUDIT_MODES, type DedupeAuditMode, type DedupeAuditOptions, type DedupeAuditResult } from \"./dedupe-audit.js\";\nexport { runDocs } from \"./docs.js\";\nexport {\n  GUIDE_DEPTH_VALUES,\n  GUIDE_OUTPUT_VALUES,\n  renderGuideMarkdown,\n  resolveGuideOutputFormat,\n  runGuide,\n  type GuideDepth,\n  type GuideOptions,\n  type GuideOutputFormat,\n  type GuideResult,\n} from \"./guide.js\";\nexport { runExtension, type ExtensionCommandOptions, type ExtensionCommandResult } from \"./extension.js\";\nexport { runFiles, runFilesDiscover } from \"./files.js\";\nexport { runGc } from \"./gc.js\";\nexport { runGet } from \"./get.js\";\nexport { runHealth } from \"./health.js\";\nexport { runHistory } from \"./history.js\";\nexport { runInit } from \"./init.js\";\nexport { runLearnings } from \"./learnings.js\";\nexport { runList, type ListOptions } from \"./list.js\";\nexport { runNormalize, type NormalizeCommandOptions, type NormalizeResult } from \"./normalize.js\";\nexport { runNotes } from \"./notes.js\";\nexport { runSearch } from \"./search.js\";\nexport { runReindex, type ReindexOptions, type ReindexResult } from \"./reindex.js\";\nexport { runRestore } from \"./restore.js\";\nexport { runStats } from \"./stats.js\";\nexport { runTest } from \"./test.js\";\nexport { runTestAll } from \"./test-all.js\";\nexport {\n  runStartBackgroundRun,\n  runTestRunsList,\n  runTestRunsLogs,\n  runTestRunsResume,\n  runTestRunsStatus,\n  runTestRunsStop,\n  runTestRunsWorker,\n} from \"./test-runs.js\";\nexport {\n  loadCreateTemplateOptions,\n  runTemplatesList,\n  runTemplatesSave,\n  runTemplatesShow,\n  type TemplatesListResult,\n  type TemplatesSaveResult,\n  type TemplatesShowResult,\n} from \"./templates.js\";\nexport { runUpdate } from \"./update.js\";\nexport { runUpdateMany, type UpdateManyCommandOptions, type UpdateManyResult } from \"./update-many.js\";\nexport { runValidate, type ValidateCheck, type ValidateCommandOptions, type ValidateResult } from \"./validate.js\";\n"]}
+{"version":3,"file":"index.js","sourceRoot":"/","sources":["cli/commands/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AACxC,OAAO,EAAE,YAAY,EAA+C,MAAM,gBAAgB,CAAC;AAC3F,OAAO,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AAC5C,OAAO,EAAE,QAAQ,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAClD,OAAO,EAAE,QAAQ,EAA8C,MAAM,YAAY,CAAC;AAClF,OAAO,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AAC5C,OAAO,EAAE,SAAS,EAAgD,MAAM,aAAa,CAAC;AACtF,OAAO,EAAE,YAAY,EAAsD,MAAM,gBAAgB,CAAC;AAClG,OAAO,EACL,qBAAqB,EACrB,qBAAqB,EACrB,0BAA0B,EAC1B,UAAU,GAIX,MAAM,cAAc,CAAC;AACtB,OAAO,EAAE,SAAS,EAA6B,MAAM,aAAa,CAAC;AACnE,OAAO,EAAE,SAAS,EAAgD,MAAM,aAAa,CAAC;AACtF,OAAO,EAAE,OAAO,EAAE,kBAAkB,EAA6D,MAAM,WAAW,CAAC;AACnH,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AACpC,OAAO,EAAE,YAAY,EAA6D,MAAM,gBAAgB,CAAC;AACzG,OAAO,EAAE,QAAQ,EAAE,gBAAgB,EAAE,MAAM,YAAY,CAAC;AACxD,OAAO,EAAE,KAAK,EAAE,MAAM,SAAS,CAAC;AAChC,OAAO,EAAE,MAAM,EAAE,MAAM,UAAU,CAAC;AAClC,OAAO,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AACxC,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC1C,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AACpC,OAAO,EAAE,YAAY,EAAE,MAAM,gBAAgB,CAAC;AAC9C,OAAO,EAAE,OAAO,EAAoB,MAAM,WAAW,CAAC;AACtD,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAC;AACtC,OAAO,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AACxC,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAC;AACtC,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AACpC,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAC;AAC3C,OAAO,EACL,qBAAqB,EACrB,eAAe,EACf,eAAe,EACf,iBAAiB,EACjB,iBAAiB,EACjB,eAAe,EACf,iBAAiB,GAClB,MAAM,gBAAgB,CAAC;AACxB,OAAO,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AACxC,OAAO,EAAE,aAAa,EAAwD,MAAM,kBAAkB,CAAC;AACvG,OAAO,EAAE,UAAU,EAAkD,MAAM,cAAc,CAAC;AAC1F,OAAO,EAAE,WAAW,EAAwE,MAAM,eAAe,CAAC","sourcesContent":["export { runAppend } from \"./append.js\";\nexport { runAggregate, type AggregateOptions, type AggregateResult } from \"./aggregate.js\";\nexport { runActivity } from \"./activity.js\";\nexport { runClaim, runRelease } from \"./claim.js\";\nexport { runClose, type CloseCommandOptions, type CloseResult } from \"./close.js\";\nexport { runComments } from \"./comments.js\";\nexport { runConfig, type ConfigCommandOptions, type ConfigResult } from \"./config.js\";\nexport { runContracts, type ContractsCommandOptions, type ContractsResult } from \"./contracts.js\";\nexport {\n  CONTEXT_OUTPUT_VALUES,\n  renderContextMarkdown,\n  resolveContextOutputFormat,\n  runContext,\n  type ContextOptions,\n  type ContextOutputFormat,\n  type ContextResult,\n} from \"./context.js\";\nexport { runCreate, type CreateCommandOptions } from \"./create.js\";\nexport { runDelete, type DeleteCommandOptions, type DeleteResult } from \"./delete.js\";\nexport { runDeps, DEPS_FORMAT_VALUES, type DepsCommandOptions, type DepsFormat, type DepsResult } from \"./deps.js\";\nexport { runDocs } from \"./docs.js\";\nexport { runExtension, type ExtensionCommandOptions, type ExtensionCommandResult } from \"./extension.js\";\nexport { runFiles, runFilesDiscover } from \"./files.js\";\nexport { runGc } from \"./gc.js\";\nexport { runGet } from \"./get.js\";\nexport { runHealth } from \"./health.js\";\nexport { runHistory } from \"./history.js\";\nexport { runInit } from \"./init.js\";\nexport { runLearnings } from \"./learnings.js\";\nexport { runList, type ListOptions } from \"./list.js\";\nexport { runNotes } from \"./notes.js\";\nexport { runSearch } from \"./search.js\";\nexport { runRestore } from \"./restore.js\";\nexport { runStats } from \"./stats.js\";\nexport { runTest } from \"./test.js\";\nexport { runTestAll } from \"./test-all.js\";\nexport {\n  runStartBackgroundRun,\n  runTestRunsList,\n  runTestRunsLogs,\n  runTestRunsResume,\n  runTestRunsStatus,\n  runTestRunsStop,\n  runTestRunsWorker,\n} from \"./test-runs.js\";\nexport { runUpdate } from \"./update.js\";\nexport { runUpdateMany, type UpdateManyCommandOptions, type UpdateManyResult } from \"./update-many.js\";\nexport { runUpgrade, type UpgradeCommandOptions, type UpgradeResult } from \"./upgrade.js\";\nexport { runValidate, type ValidateCheck, type ValidateCommandOptions, type ValidateResult } from \"./validate.js\";\n"]}

package/dist/cli/commands/reindex.d.ts

@@ -7,6 +7,14 @@ export interface ReindexResult {
     ok: boolean;
     mode: "keyword" | "semantic" | "hybrid";
     total_items: number;
+    semantic: {
+        enabled: boolean;
+        stale_items: number;
+        unchanged_items: number;
+        embedded_items: number;
+        vector_upserted: number;
+        batches_completed: number;
+    };
     artifacts: {
         manifest: string;
         embeddings: string;

package/dist/cli/commands/reindex.js

@@ -1,9 +1,11 @@
+import fs from "node:fs/promises";
 import path from "node:path";
 import { toNonEmptyStringOrUndefined } from "../../core/shared/primitives.js";
 import { getActiveExtensionRegistrations, runActiveOnIndexHooks, runActiveOnWriteHooks } from "../../core/extensions/index.js";
 import { resolveRegisteredSearchProvider, resolveRegisteredVectorStoreAdapter, } from "../../core/extensions/runtime-registrations.js";
 import { pathExists, writeFileAtomic } from "../../core/fs/fs-utils.js";
 import { resolveItemTypeRegistry } from "../../core/item/type-registry.js";
+import { parseItemDocument } from "../../core/item/item-format.js";
 import { acquireLock } from "../../core/lock/lock.js";
 import { buildSearchCorpus, buildSemanticCorpusInput } from "../../core/search/corpus.js";
 import { executeEmbeddingBatchesWithRetry } from "../../core/search/embedding-batches.js";
@@ -14,7 +16,7 @@ import { executeVectorUpsert, resolveVectorStores } from "../../core/search/vect
 import { EXIT_CODE } from "../../core/shared/constants.js";
 import { PmCliError } from "../../core/shared/errors.js";
 import { nowIso } from "../../core/shared/time.js";
-import { listAllFrontMatterWithBody } from "../../core/store/item-store.js";
+import { listAllDocumentCandidatesCached } from "../../core/store/front-matter-cache.js";
 import { getSettingsPath, resolvePmRoot } from "../../core/store/paths.js";
 import { readSettings } from "../../core/store/settings.js";
 const MANIFEST_PATH = "index/manifest.json";
@@ -44,15 +46,48 @@ function parseMode(raw) {
     }
     throw new PmCliError("Reindex mode must be one of keyword|semantic|hybrid", EXIT_CODE.USAGE);
 }
-async function loadDocuments(pmRoot, itemFormat, typeToFolder, schema) {
-    const items = await listAllFrontMatterWithBody(pmRoot, itemFormat, typeToFolder, undefined, schema);
-    return items.map((item) => {
-        const { body, ...frontMatter } = item;
-        return {
-            metadata: frontMatter,
-            body,
-        };
-    });
+async function loadDocumentCandidates(pmRoot, itemFormat, typeToFolder, schema) {
+    const warnings = [];
+    const candidates = await listAllDocumentCandidatesCached(pmRoot, itemFormat, typeToFolder, warnings, schema);
+    return {
+        candidates,
+        warnings,
+    };
+}
+async function hydrateDocuments(pmRoot, candidates, schema, warnings, itemIds) {
+    const hydrated = [];
+    for (const candidate of candidates) {
+        if (itemIds && !itemIds.has(candidate.metadata.id)) {
+            continue;
+        }
+        if (typeof candidate.body === "string") {
+            hydrated.push({
+                metadata: candidate.metadata,
+                body: candidate.body,
+            });
+            continue;
+        }
+        try {
+            const raw = await fs.readFile(candidate.item_path, "utf8");
+            const parsed = parseItemDocument(raw, {
+                format: candidate.item_format,
+                schema,
+                onWarning: (warning) => warnings.push(warning),
+            });
+            hydrated.push({
+                metadata: candidate.metadata,
+                body: parsed.body,
+            });
+        }
+        catch {
+            warnings.push(`item_list_item_read_failed:${path.relative(pmRoot, candidate.item_path)}`);
+            hydrated.push({
+                metadata: candidate.metadata,
+                body: "",
+            });
+        }
+    }
+    return hydrated;
 }
 function buildKeywordRecord(document, mode) {
     const item = document.metadata;
@@ -196,15 +231,21 @@ export async function runReindex(options, global) {
         }
         const mode = requestedMode;
         emitReindexProgress(progressEnabled, "loading item corpus");
-        const documents = await loadDocuments(pmRoot, settings.item_format, typeRegistry.type_to_folder, settings.schema);
-        emitReindexProgress(progressEnabled, `loaded_items=${documents.length}`);
+        const loadedCandidates = await loadDocumentCandidates(pmRoot, settings.item_format, typeRegistry.type_to_folder, settings.schema);
+        const reindexWarnings = [...loadedCandidates.warnings];
+        const documentCandidates = loadedCandidates.candidates;
+        const metadataDocuments = documentCandidates.map((candidate) => ({
+            metadata: candidate.metadata,
+            body: typeof candidate.body === "string" ? candidate.body : "",
+        }));
+        emitReindexProgress(progressEnabled, `loaded_items=${metadataDocuments.length}`);
         const generatedAt = nowIso();
         const manifest = {
             version: 1,
             mode,
             generated_at: generatedAt,
-            total_items: documents.length,
-            items: documents.map((document) => ({
+            total_items: metadataDocuments.length,
+            items: metadataDocuments.map((document) => ({
                 id: document.metadata.id,
                 type: document.metadata.type,
                 status: document.metadata.status,
@@ -214,15 +255,32 @@ export async function runReindex(options, global) {
         };
         const manifestPath = path.join(pmRoot, MANIFEST_PATH);
         const embeddingsPath = path.join(pmRoot, EMBEDDINGS_PATH);
-        const embeddingsLines = documents.map((document) => JSON.stringify(buildKeywordRecord(document, mode))).join("\n");
+        let documentsForKeywordArtifacts = mode === "keyword"
+            ? await hydrateDocuments(pmRoot, documentCandidates, settings.schema, reindexWarnings)
+            : metadataDocuments;
         const semanticWarnings = [];
         const vectorizationLedgerEntries = {};
-        if (mode !== "keyword" && documents.length > 0) {
+        const semanticSummary = {
+            enabled: mode !== "keyword",
+            stale_items: 0,
+            unchanged_items: 0,
+            embedded_items: 0,
+            vector_upserted: 0,
+            batches_completed: 0,
+        };
+        if (mode !== "keyword" && metadataDocuments.length > 0) {
             const ledger = await readVectorizationStatusLedger(pmRoot);
             semanticWarnings.push(...ledger.warnings);
-            const staleDocuments = documents.filter((document) => ledger.entries[document.metadata.id] !== document.metadata.updated_at);
-            const freshDocuments = documents.length - staleDocuments.length;
-            for (const document of documents) {
+            const staleIds = new Set(metadataDocuments
+                .filter((document) => ledger.entries[document.metadata.id] !== document.metadata.updated_at)
+                .map((document) => document.metadata.id));
+            const staleDocuments = staleIds.size > 0
+                ? await hydrateDocuments(pmRoot, documentCandidates, settings.schema, reindexWarnings, staleIds)
+                : [];
+            const freshDocuments = metadataDocuments.length - staleDocuments.length;
+            semanticSummary.stale_items = staleDocuments.length;
+            semanticSummary.unchanged_items = freshDocuments;
+            for (const document of metadataDocuments) {
                 vectorizationLedgerEntries[document.metadata.id] = document.metadata.updated_at;
             }
             if (staleDocuments.length === 0) {
@@ -249,7 +307,14 @@ export async function runReindex(options, global) {
                     if (!activeEmbeddingProvider) {
                         throw new PmCliError(`No embedding executor available for reindex mode '${requestedMode}'`, EXIT_CODE.USAGE);
                     }
-                    const embeddingResult = await executeEmbeddingBatchesWithRetry(activeEmbeddingProvider, settings, corpusInputs);
+                    const embeddingResult = await executeEmbeddingBatchesWithRetry(activeEmbeddingProvider, settings, corpusInputs, {
+                        onProgress: (event) => {
+                            if (event.phase === "complete") {
+                                semanticSummary.batches_completed = event.batch_index;
+                            }
+                            emitReindexProgress(progressEnabled, `embedding_batch_${event.phase} batch=${event.batch_index}/${event.batch_total} size=${event.batch_size} completed_inputs=${event.completed_inputs}/${event.total_inputs}`);
+                        },
+                    });
                     semanticWarnings.push(...embeddingResult.warnings);
                     vectors = embeddingResult.vectors;
                 }
@@ -268,6 +333,7 @@ export async function runReindex(options, global) {
                         updated_at: document.metadata.updated_at,
                     },
                 }));
+                semanticSummary.embedded_items = vectors.length;
                 if (extensionVectorUpsert) {
                     try {
                         emitReindexProgress(progressEnabled, `vector_upsert_start adapter=${extensionVectorUpsert.name} points=${points.length}`);
@@ -275,6 +341,7 @@ export async function runReindex(options, global) {
                             points,
                             settings,
                         }));
+                        semanticSummary.vector_upserted = points.length;
                         emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${extensionVectorUpsert.name}`);
                     }
                     catch (error) {
@@ -284,12 +351,14 @@ export async function runReindex(options, global) {
                         semanticWarnings.push(`Extension vector adapter "${extensionVectorUpsert.name}" failed; falling back to built-in vector store (${error instanceof Error ? error.message : String(error)})`);
                         emitReindexProgress(progressEnabled, "vector_upsert_fallback built_in_store");
                         await executeVectorUpsert(activeVectorStore, points);
+                        semanticSummary.vector_upserted = points.length;
                         emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${activeVectorStore.name}`);
                     }
                 }
                 else if (activeVectorStore) {
                     emitReindexProgress(progressEnabled, `vector_upsert_start adapter=${activeVectorStore.name} points=${points.length}`);
                     await executeVectorUpsert(activeVectorStore, points);
+                    semanticSummary.vector_upserted = points.length;
                     emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${activeVectorStore.name}`);
                 }
                 else {
@@ -298,8 +367,11 @@ export async function runReindex(options, global) {
                 if (freshDocuments > 0) {
                     semanticWarnings.push(`search_semantic_reindex_skipped_unchanged:count=${freshDocuments}`);
                 }
+                const staleDocumentsById = new Map(staleDocuments.map((document) => [document.metadata.id, document]));
+                documentsForKeywordArtifacts = metadataDocuments.map((document) => staleDocumentsById.get(document.metadata.id) ?? document);
             }
         }
+        const embeddingsLines = documentsForKeywordArtifacts.map((document) => JSON.stringify(buildKeywordRecord(document, mode))).join("\n");
         emitReindexProgress(progressEnabled, "writing keyword artifacts");
         await writeFileAtomic(manifestPath, `${JSON.stringify(manifest, null, 2)}\n`);
         await writeFileAtomic(embeddingsPath, `${embeddingsLines}\n`);
@@ -326,19 +398,20 @@ export async function runReindex(options, global) {
             })),
             ...(await runActiveOnIndexHooks({
                 mode,
-                total_items: documents.length,
+                total_items: metadataDocuments.length,
             })),
         ];
         emitReindexProgress(progressEnabled, "done");
         return {
             ok: true,
             mode,
-            total_items: documents.length,
+            total_items: metadataDocuments.length,
+            semantic: semanticSummary,
             artifacts: {
                 manifest: MANIFEST_PATH,
                 embeddings: EMBEDDINGS_PATH,
             },
-            warnings: [...semanticWarnings, ...vectorizationWarnings, ...hookWarnings],
+            warnings: [...reindexWarnings, ...semanticWarnings, ...vectorizationWarnings, ...hookWarnings],
             generated_at: generatedAt,
         };
     }

package/dist/cli/commands/reindex.js.map

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path from \"node:path\";\nimport { toNonEmptyStringOrUndefined } from \"../../core/shared/primitives.js\";\nimport { getActiveExtensionRegistrations, runActiveOnIndexHooks, runActiveOnWriteHooks } from \"../../core/extensions/index.js\";\nimport {\n  resolveRegisteredSearchProvider,\n  resolveRegisteredVectorStoreAdapter,\n} from \"../../core/extensions/runtime-registrations.js\";\nimport { pathExists, writeFileAtomic } from \"../../core/fs/fs-utils.js\";\nimport { resolveItemTypeRegistry } from \"../../core/item/type-registry.js\";\nimport { acquireLock } from \"../../core/lock/lock.js\";\nimport { buildSearchCorpus, buildSemanticCorpusInput } from \"../../core/search/corpus.js\";\nimport { executeEmbeddingBatchesWithRetry } from \"../../core/search/embedding-batches.js\";\nimport { readVectorizationStatusLedger, writeVectorizationStatusLedger } from \"../../core/search/cache.js\";\nimport { resolveEmbeddingProviders } from \"../../core/search/providers.js\";\nimport { resolveSettingsWithSemanticRuntimeDefaults } from \"../../core/search/semantic-defaults.js\";\nimport { executeVectorUpsert, resolveVectorStores } from \"../../core/search/vector-stores.js\";\nimport { EXIT_CODE } from \"../../core/shared/constants.js\";\nimport type { GlobalOptions } from \"../../core/shared/command-types.js\";\nimport { PmCliError } from \"../../core/shared/errors.js\";\nimport { nowIso } from \"../../core/shared/time.js\";\nimport { listAllFrontMatterWithBody } from \"../../core/store/item-store.js\";\nimport { getSettingsPath, resolvePmRoot } from \"../../core/store/paths.js\";\nimport { readSettings } from \"../../core/store/settings.js\";\nimport type { ItemDocument, PmSettings } from \"../../types/index.js\";\n\nconst MANIFEST_PATH = \"index/manifest.json\";\nconst EMBEDDINGS_PATH = \"search/embeddings.jsonl\";\nconst REINDEX_LOCK_ID = \"reindex\";\n\nexport interface ReindexOptions {\n  mode?: string;\n  progress?: boolean;\n}\n\nexport interface ReindexResult {\n  ok: boolean;\n  mode: \"keyword\" | \"semantic\" | \"hybrid\";\n  total_items: number;\n  artifacts: {\n    manifest: string;\n    embeddings: string;\n  };\n  warnings: string[];\n  generated_at: string;\n}\n\nfunction shouldEmitReindexProgress(options: ReindexOptions): boolean {\n  return options.progress === true || process.stderr.isTTY === true;\n}\n\nfunction emitReindexProgress(enabled: boolean, message: string): void {\n  if (!enabled) {\n    return;\n  }\n  try {\n    process.stderr.write(`[pm reindex] ${message}\\n`);\n  } catch {\n    // Ignore transient stderr write failures.\n  }\n}\n\nfunction parseMode(raw: string | undefined): \"keyword\" | \"semantic\" | \"hybrid\" {\n  const normalized = (raw ?? \"keyword\").trim().toLowerCase();\n  if (normalized === \"keyword\") {\n    return \"keyword\";\n  }\n  if (normalized === \"semantic\" || normalized === \"hybrid\") {\n    return normalized;\n  }\n  throw new PmCliError(\"Reindex mode must be one of keyword|semantic|hybrid\", EXIT_CODE.USAGE);\n}\n\nasync function loadDocuments(\n  pmRoot: string,\n  itemFormat: \"toon\" | \"json_markdown\",\n  typeToFolder: Record<string, string>,\n  schema: PmSettings[\"schema\"],\n): Promise<ItemDocument[]> {\n  const items = await listAllFrontMatterWithBody(pmRoot, itemFormat, typeToFolder, undefined, schema);\n  return items.map((item) => {\n    const { body, ...frontMatter } = item;\n    return {\n      metadata: frontMatter,\n      body,\n    };\n  });\n}\n\nfunction buildKeywordRecord(document: ItemDocument, mode: \"keyword\" | \"semantic\" | \"hybrid\"): Record<string, unknown> {\n  const item = document.metadata;\n  return {\n    id: item.id,\n    mode,\n    updated_at: item.updated_at,\n    corpus: buildSearchCorpus(document),\n  };\n}\n\ntype ExtensionEmbedBatch = (context: {\n  inputs: string[];\n  settings: PmSettings;\n  model: string;\n}) => Promise<number[][]> | number[][];\n\ntype ExtensionEmbedOne = (context: {\n  input: string;\n  settings: PmSettings;\n  model: string;\n}) => Promise<number[]> | number[];\n\ntype ExtensionVectorUpsert = (context: {\n  points: Array<{\n    id: string;\n    vector: number[];\n    payload: Record<string, unknown>;\n  }>;\n  settings: PmSettings;\n}) => Promise<void> | void;\n\nconst toOptionalNonEmptyString = toNonEmptyStringOrUndefined;\n\nfunction resolveExtensionSearchEmbedding(\n  settings: PmSettings,\n): { name: string; embedBatch?: ExtensionEmbedBatch; embed?: ExtensionEmbedOne } | null {\n  const registrations = getActiveExtensionRegistrations();\n  const providerName = toOptionalNonEmptyString(settings.search?.provider);\n  const registration = resolveRegisteredSearchProvider(registrations, providerName);\n  if (!registration) {\n    return null;\n  }\n  const runtimeDefinition = registration.runtime_definition ?? registration.definition;\n  const name =\n    toOptionalNonEmptyString((runtimeDefinition as { name?: unknown }).name) ??\n    toOptionalNonEmptyString((registration.definition as { name?: unknown }).name) ??\n    providerName;\n  if (!name) {\n    return null;\n  }\n  const embedBatch = (runtimeDefinition as { embedBatch?: unknown; embed_batch?: unknown }).embedBatch;\n  const embedBatchSnake = (runtimeDefinition as { embedBatch?: unknown; embed_batch?: unknown }).embed_batch;\n  const embed = (runtimeDefinition as { embed?: unknown }).embed;\n  const resolvedEmbedBatch =\n    typeof embedBatch === \"function\"\n      ? (embedBatch as ExtensionEmbedBatch)\n      : typeof embedBatchSnake === \"function\"\n        ? (embedBatchSnake as ExtensionEmbedBatch)\n        : undefined;\n  const resolvedEmbed = typeof embed === \"function\" ? (embed as ExtensionEmbedOne) : undefined;\n  if (!resolvedEmbedBatch && !resolvedEmbed) {\n    return null;\n  }\n  return {\n    name,\n    embedBatch: resolvedEmbedBatch,\n    embed: resolvedEmbed,\n  };\n}\n\nfunction resolveExtensionVectorUpsert(settings: PmSettings): { name: string; upsert: ExtensionVectorUpsert } | null {\n  const registrations = getActiveExtensionRegistrations();\n  const adapterName = toOptionalNonEmptyString(settings.vector_store?.adapter);\n  const registration = resolveRegisteredVectorStoreAdapter(registrations, adapterName);\n  if (!registration) {\n    return null;\n  }\n  const runtimeDefinition = registration.runtime_definition ?? registration.definition;\n  const name =\n    toOptionalNonEmptyString((runtimeDefinition as { name?: unknown }).name) ??\n    toOptionalNonEmptyString((registration.definition as { name?: unknown }).name) ??\n    adapterName;\n  const upsert = (runtimeDefinition as { upsert?: unknown }).upsert;\n  if (!name || typeof upsert !== \"function\") {\n    return null;\n  }\n  return {\n    name,\n    upsert: upsert as ExtensionVectorUpsert,\n  };\n}\n\nfunction assertVector(value: unknown, context: string): number[] {\n  if (!Array.isArray(value) || value.some((entry) => typeof entry !== \"number\" || !Number.isFinite(entry))) {\n    throw new PmCliError(`Invalid vector returned by ${context}`, EXIT_CODE.GENERIC_FAILURE);\n  }\n  return value;\n}\n\nasync function executeExtensionEmbedding(\n  extensionEmbedding: { name: string; embedBatch?: ExtensionEmbedBatch; embed?: ExtensionEmbedOne },\n  settings: PmSettings,\n  corpusInputs: string[],\n): Promise<number[][]> {\n  const model = settings.search?.embedding_model?.trim() || \"text-embedding-3-small\";\n  if (extensionEmbedding.embedBatch) {\n    const vectors = await Promise.resolve(\n      extensionEmbedding.embedBatch({\n        inputs: corpusInputs,\n        settings,\n        model,\n      }),\n    );\n    if (!Array.isArray(vectors)) {\n      throw new PmCliError(\n        `Extension search provider \"${extensionEmbedding.name}\" embedBatch must return an array of vectors`,\n        EXIT_CODE.GENERIC_FAILURE,\n      );\n    }\n    return vectors.map((vector, index) =>\n      assertVector(vector, `extension search provider \"${extensionEmbedding.name}\" embedBatch output at index ${index}`),\n    );\n  }\n  if (!extensionEmbedding.embed) {\n    throw new PmCliError(\n      `Extension search provider \"${extensionEmbedding.name}\" does not implement embed/embedBatch`,\n      EXIT_CODE.GENERIC_FAILURE,\n    );\n  }\n  const vectors: number[][] = [];\n  for (const [index, input] of corpusInputs.entries()) {\n    const vector = await Promise.resolve(\n      extensionEmbedding.embed({\n        input,\n        settings,\n        model,\n      }),\n    );\n    vectors.push(assertVector(vector, `extension search provider \"${extensionEmbedding.name}\" embed output at index ${index}`));\n  }\n  return vectors;\n}\n\nexport async function runReindex(options: ReindexOptions, global: GlobalOptions): Promise<ReindexResult> {\n  const requestedMode = parseMode(options.mode);\n  const progressEnabled = shouldEmitReindexProgress(options);\n  emitReindexProgress(progressEnabled, `start mode=${requestedMode}`);\n  const pmRoot = resolvePmRoot(process.cwd(), global.path);\n  if (!(await pathExists(getSettingsPath(pmRoot)))) {\n    throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);\n  }\n\n  const settings = resolveSettingsWithSemanticRuntimeDefaults(await readSettings(pmRoot)).settings;\n  let releaseReindexLock: (() => Promise<void>) | null = null;\n  try {\n    releaseReindexLock = await acquireLock(\n      pmRoot,\n      REINDEX_LOCK_ID,\n      settings.locks.ttl_seconds,\n      process.env.PM_AUTHOR ?? \"pm-reindex\",\n      false,\n      settings.governance.force_required_for_stale_lock,\n    );\n  } catch (error: unknown) {\n    if (error instanceof PmCliError && error.exitCode === EXIT_CODE.CONFLICT) {\n      throw new PmCliError(\n        \"Another pm reindex run is already active for this project. Wait for it to finish before starting a new keyword, semantic, or hybrid reindex.\",\n        EXIT_CODE.CONFLICT,\n        {\n          code: \"reindex_already_running\",\n          type: \"urn:pm-cli:error:reindex_already_running\",\n          why: \"Semantic reindex can be expensive and duplicate runs compete for the same local embedding model and vector store.\",\n          nextSteps: [\n            \"Check active pm reindex processes before starting another reindex.\",\n            \"Rerun with --progress when you need non-interactive visibility.\",\n          ],\n        },\n      );\n    }\n    throw error;\n  }\n\n  try {\n  const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());\n  const extensionEmbedding = resolveExtensionSearchEmbedding(settings);\n  const extensionVectorUpsert = resolveExtensionVectorUpsert(settings);\n  let activeEmbeddingProvider: ReturnType<typeof resolveEmbeddingProviders>[\"active\"] = null;\n  let activeVectorStore: ReturnType<typeof resolveVectorStores>[\"active\"] = null;\n  if (requestedMode !== \"keyword\") {\n    const providerResolution = resolveEmbeddingProviders(settings);\n    if (!providerResolution.active && !extensionEmbedding) {\n      throw new PmCliError(\n        `Reindex mode '${requestedMode}' requires a configured embedding provider in settings.providers.openai/settings.providers.ollama or an extension provider selected by settings.search.provider`,\n        EXIT_CODE.USAGE,\n      );\n    }\n    const vectorResolution = resolveVectorStores(settings);\n    if (!vectorResolution.active && !extensionVectorUpsert) {\n      throw new PmCliError(\n        `Reindex mode '${requestedMode}' requires a configured vector store in settings.vector_store.qdrant/settings.vector_store.lancedb or an extension adapter selected by settings.vector_store.adapter`,\n        EXIT_CODE.USAGE,\n      );\n    }\n    activeEmbeddingProvider = providerResolution.active;\n    activeVectorStore = vectorResolution.active;\n  }\n  const mode = requestedMode;\n  emitReindexProgress(progressEnabled, \"loading item corpus\");\n  const documents = await loadDocuments(pmRoot, settings.item_format, typeRegistry.type_to_folder, settings.schema);\n  emitReindexProgress(progressEnabled, `loaded_items=${documents.length}`);\n  const generatedAt = nowIso();\n\n  const manifest = {\n    version: 1,\n    mode,\n    generated_at: generatedAt,\n    total_items: documents.length,\n    items: documents.map((document) => ({\n      id: document.metadata.id,\n      type: document.metadata.type,\n      status: document.metadata.status,\n      priority: document.metadata.priority,\n      updated_at: document.metadata.updated_at,\n    })),\n  };\n\n  const manifestPath = path.join(pmRoot, MANIFEST_PATH);\n  const embeddingsPath = path.join(pmRoot, EMBEDDINGS_PATH);\n\n  const embeddingsLines = documents.map((document) => JSON.stringify(buildKeywordRecord(document, mode))).join(\"\\n\");\n  const semanticWarnings: string[] = [];\n  const vectorizationLedgerEntries: Record<string, string> = {};\n  if (mode !== \"keyword\" && documents.length > 0) {\n    const ledger = await readVectorizationStatusLedger(pmRoot);\n    semanticWarnings.push(...ledger.warnings);\n    const staleDocuments = documents.filter(\n      (document) => ledger.entries[document.metadata.id] !== document.metadata.updated_at,\n    );\n    const freshDocuments = documents.length - staleDocuments.length;\n    for (const document of documents) {\n      vectorizationLedgerEntries[document.metadata.id] = document.metadata.updated_at;\n    }\n    if (staleDocuments.length === 0) {\n      emitReindexProgress(progressEnabled, `embedding_skipped unchanged_items=${freshDocuments}`);\n      semanticWarnings.push(`search_semantic_reindex_skipped_unchanged:count=${freshDocuments}`);\n    } else {\n      emitReindexProgress(progressEnabled, `embedding_start items=${staleDocuments.length} unchanged_items=${freshDocuments}`);\n      const semanticProviderName = activeEmbeddingProvider?.name ?? extensionEmbedding?.name;\n      const corpusInputs = staleDocuments.map((document) => buildSemanticCorpusInput(document, { providerName: semanticProviderName }));\n      let vectors: number[][] = [];\n      if (extensionEmbedding) {\n        try {\n          vectors = await executeExtensionEmbedding(extensionEmbedding, settings, corpusInputs);\n        } catch (error: unknown) {\n          if (!activeEmbeddingProvider) {\n            throw new PmCliError(\n              `Extension search provider \"${extensionEmbedding.name}\" failed to generate embeddings: ${error instanceof Error ? error.message : String(error)}`,\n              EXIT_CODE.GENERIC_FAILURE,\n            );\n          }\n          semanticWarnings.push(\n            `Extension search provider \"${extensionEmbedding.name}\" failed; falling back to built-in provider (${error instanceof Error ? error.message : String(error)})`,\n          );\n        }\n      }\n      if (vectors.length === 0) {\n        if (!activeEmbeddingProvider) {\n          throw new PmCliError(\n            `No embedding executor available for reindex mode '${requestedMode}'`,\n            EXIT_CODE.USAGE,\n          );\n        }\n        const embeddingResult = await executeEmbeddingBatchesWithRetry(activeEmbeddingProvider, settings, corpusInputs);\n        semanticWarnings.push(...embeddingResult.warnings);\n        vectors = embeddingResult.vectors;\n      }\n      emitReindexProgress(progressEnabled, `embedding_complete vectors=${vectors.length}`);\n      if (vectors.length !== staleDocuments.length) {\n        throw new PmCliError(\n          `Embedding output size mismatch (expected ${staleDocuments.length}, received ${vectors.length})`,\n          EXIT_CODE.GENERIC_FAILURE,\n        );\n      }\n      const points = staleDocuments.map((document, index) => ({\n        id: document.metadata.id,\n        vector: assertVector(vectors[index], `reindex embeddings output at index ${index}`),\n        payload: {\n          id: document.metadata.id,\n          type: document.metadata.type,\n          status: document.metadata.status,\n          priority: document.metadata.priority,\n          updated_at: document.metadata.updated_at,\n        },\n      }));\n      if (extensionVectorUpsert) {\n        try {\n          emitReindexProgress(progressEnabled, `vector_upsert_start adapter=${extensionVectorUpsert.name} points=${points.length}`);\n          await Promise.resolve(\n            extensionVectorUpsert.upsert({\n              points,\n              settings,\n            }),\n          );\n          emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${extensionVectorUpsert.name}`);\n        } catch (error: unknown) {\n          if (!activeVectorStore) {\n            throw new PmCliError(\n              `Extension vector adapter \"${extensionVectorUpsert.name}\" failed to upsert vectors: ${error instanceof Error ? error.message : String(error)}`,\n              EXIT_CODE.GENERIC_FAILURE,\n            );\n          }\n          semanticWarnings.push(\n            `Extension vector adapter \"${extensionVectorUpsert.name}\" failed; falling back to built-in vector store (${error instanceof Error ? error.message : String(error)})`,\n          );\n          emitReindexProgress(progressEnabled, \"vector_upsert_fallback built_in_store\");\n          await executeVectorUpsert(activeVectorStore, points);\n          emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${activeVectorStore.name}`);\n        }\n      } else if (activeVectorStore) {\n        emitReindexProgress(progressEnabled, `vector_upsert_start adapter=${activeVectorStore.name} points=${points.length}`);\n        await executeVectorUpsert(activeVectorStore, points);\n        emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${activeVectorStore.name}`);\n      } else {\n        throw new PmCliError(\n          `No vector upsert executor available for reindex mode '${requestedMode}'`,\n          EXIT_CODE.USAGE,\n        );\n      }\n      if (freshDocuments > 0) {\n        semanticWarnings.push(`search_semantic_reindex_skipped_unchanged:count=${freshDocuments}`);\n      }\n    }\n  }\n  emitReindexProgress(progressEnabled, \"writing keyword artifacts\");\n  await writeFileAtomic(manifestPath, `${JSON.stringify(manifest, null, 2)}\\n`);\n  await writeFileAtomic(embeddingsPath, `${embeddingsLines}\\n`);\n  const vectorizationWarnings: string[] = [];\n  if (mode !== \"keyword\") {\n    try {\n      emitReindexProgress(progressEnabled, \"writing vectorization status ledger\");\n      await writeVectorizationStatusLedger(pmRoot, vectorizationLedgerEntries);\n    } catch (error: unknown) {\n      vectorizationWarnings.push(\n        `search_vectorization_status_ledger_write_failed:${error instanceof Error ? error.message : String(error)}`,\n      );\n    }\n  }\n  const hookWarnings = [\n    ...(await runActiveOnWriteHooks({\n      path: manifestPath,\n      scope: \"project\",\n      op: \"reindex:manifest\",\n    })),\n    ...(await runActiveOnWriteHooks({\n      path: embeddingsPath,\n      scope: \"project\",\n      op: \"reindex:embeddings\",\n    })),\n    ...(await runActiveOnIndexHooks({\n      mode,\n      total_items: documents.length,\n    })),\n  ];\n  emitReindexProgress(progressEnabled, \"done\");\n\n  return {\n    ok: true,\n    mode,\n    total_items: documents.length,\n    artifacts: {\n      manifest: MANIFEST_PATH,\n      embeddings: EMBEDDINGS_PATH,\n    },\n    warnings: [...semanticWarnings, ...vectorizationWarnings, ...hookWarnings],\n    generated_at: generatedAt,\n  };\n  } finally {\n    await releaseReindexLock?.();\n  }\n}\n"]}
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fs from \"node:fs/promises\";\nimport path from \"node:path\";\nimport { toNonEmptyStringOrUndefined } from \"../../core/shared/primitives.js\";\nimport { getActiveExtensionRegistrations, runActiveOnIndexHooks, runActiveOnWriteHooks } from \"../../core/extensions/index.js\";\nimport {\n  resolveRegisteredSearchProvider,\n  resolveRegisteredVectorStoreAdapter,\n} from \"../../core/extensions/runtime-registrations.js\";\nimport { pathExists, writeFileAtomic } from \"../../core/fs/fs-utils.js\";\nimport { resolveItemTypeRegistry } from \"../../core/item/type-registry.js\";\nimport { parseItemDocument } from \"../../core/item/item-format.js\";\nimport { acquireLock } from \"../../core/lock/lock.js\";\nimport { buildSearchCorpus, buildSemanticCorpusInput } from \"../../core/search/corpus.js\";\nimport { executeEmbeddingBatchesWithRetry } from \"../../core/search/embedding-batches.js\";\nimport { readVectorizationStatusLedger, writeVectorizationStatusLedger } from \"../../core/search/cache.js\";\nimport { resolveEmbeddingProviders } from \"../../core/search/providers.js\";\nimport { resolveSettingsWithSemanticRuntimeDefaults } from \"../../core/search/semantic-defaults.js\";\nimport { executeVectorUpsert, resolveVectorStores } from \"../../core/search/vector-stores.js\";\nimport { EXIT_CODE } from \"../../core/shared/constants.js\";\nimport type { GlobalOptions } from \"../../core/shared/command-types.js\";\nimport { PmCliError } from \"../../core/shared/errors.js\";\nimport { nowIso } from \"../../core/shared/time.js\";\nimport { listAllDocumentCandidatesCached, type CachedDocumentCandidate } from \"../../core/store/front-matter-cache.js\";\nimport { getSettingsPath, resolvePmRoot } from \"../../core/store/paths.js\";\nimport { readSettings } from \"../../core/store/settings.js\";\nimport type { ItemDocument, PmSettings } from \"../../types/index.js\";\n\nconst MANIFEST_PATH = \"index/manifest.json\";\nconst EMBEDDINGS_PATH = \"search/embeddings.jsonl\";\nconst REINDEX_LOCK_ID = \"reindex\";\n\nexport interface ReindexOptions {\n  mode?: string;\n  progress?: boolean;\n}\n\nexport interface ReindexResult {\n  ok: boolean;\n  mode: \"keyword\" | \"semantic\" | \"hybrid\";\n  total_items: number;\n  semantic: {\n    enabled: boolean;\n    stale_items: number;\n    unchanged_items: number;\n    embedded_items: number;\n    vector_upserted: number;\n    batches_completed: number;\n  };\n  artifacts: {\n    manifest: string;\n    embeddings: string;\n  };\n  warnings: string[];\n  generated_at: string;\n}\n\nfunction shouldEmitReindexProgress(options: ReindexOptions): boolean {\n  return options.progress === true || process.stderr.isTTY === true;\n}\n\nfunction emitReindexProgress(enabled: boolean, message: string): void {\n  if (!enabled) {\n    return;\n  }\n  try {\n    process.stderr.write(`[pm reindex] ${message}\\n`);\n  } catch {\n    // Ignore transient stderr write failures.\n  }\n}\n\nfunction parseMode(raw: string | undefined): \"keyword\" | \"semantic\" | \"hybrid\" {\n  const normalized = (raw ?? \"keyword\").trim().toLowerCase();\n  if (normalized === \"keyword\") {\n    return \"keyword\";\n  }\n  if (normalized === \"semantic\" || normalized === \"hybrid\") {\n    return normalized;\n  }\n  throw new PmCliError(\"Reindex mode must be one of keyword|semantic|hybrid\", EXIT_CODE.USAGE);\n}\n\nasync function loadDocumentCandidates(\n  pmRoot: string,\n  itemFormat: \"toon\" | \"json_markdown\",\n  typeToFolder: Record<string, string>,\n  schema: PmSettings[\"schema\"],\n): Promise<{ candidates: CachedDocumentCandidate[]; warnings: string[] }> {\n  const warnings: string[] = [];\n  const candidates = await listAllDocumentCandidatesCached(pmRoot, itemFormat, typeToFolder, warnings, schema);\n  return {\n    candidates,\n    warnings,\n  };\n}\n\nasync function hydrateDocuments(\n  pmRoot: string,\n  candidates: CachedDocumentCandidate[],\n  schema: PmSettings[\"schema\"],\n  warnings: string[],\n  itemIds?: Set<string>,\n): Promise<ItemDocument[]> {\n  const hydrated: ItemDocument[] = [];\n  for (const candidate of candidates) {\n    if (itemIds && !itemIds.has(candidate.metadata.id)) {\n      continue;\n    }\n    if (typeof candidate.body === \"string\") {\n      hydrated.push({\n        metadata: candidate.metadata,\n        body: candidate.body,\n      });\n      continue;\n    }\n    try {\n      const raw = await fs.readFile(candidate.item_path, \"utf8\");\n      const parsed = parseItemDocument(raw, {\n        format: candidate.item_format,\n        schema,\n        onWarning: (warning) => warnings.push(warning),\n      });\n      hydrated.push({\n        metadata: candidate.metadata,\n        body: parsed.body,\n      });\n    } catch {\n      warnings.push(`item_list_item_read_failed:${path.relative(pmRoot, candidate.item_path)}`);\n      hydrated.push({\n        metadata: candidate.metadata,\n        body: \"\",\n      });\n    }\n  }\n  return hydrated;\n}\n\nfunction buildKeywordRecord(document: ItemDocument, mode: \"keyword\" | \"semantic\" | \"hybrid\"): Record<string, unknown> {\n  const item = document.metadata;\n  return {\n    id: item.id,\n    mode,\n    updated_at: item.updated_at,\n    corpus: buildSearchCorpus(document),\n  };\n}\n\ntype ExtensionEmbedBatch = (context: {\n  inputs: string[];\n  settings: PmSettings;\n  model: string;\n}) => Promise<number[][]> | number[][];\n\ntype ExtensionEmbedOne = (context: {\n  input: string;\n  settings: PmSettings;\n  model: string;\n}) => Promise<number[]> | number[];\n\ntype ExtensionVectorUpsert = (context: {\n  points: Array<{\n    id: string;\n    vector: number[];\n    payload: Record<string, unknown>;\n  }>;\n  settings: PmSettings;\n}) => Promise<void> | void;\n\nconst toOptionalNonEmptyString = toNonEmptyStringOrUndefined;\n\nfunction resolveExtensionSearchEmbedding(\n  settings: PmSettings,\n): { name: string; embedBatch?: ExtensionEmbedBatch; embed?: ExtensionEmbedOne } | null {\n  const registrations = getActiveExtensionRegistrations();\n  const providerName = toOptionalNonEmptyString(settings.search?.provider);\n  const registration = resolveRegisteredSearchProvider(registrations, providerName);\n  if (!registration) {\n    return null;\n  }\n  const runtimeDefinition = registration.runtime_definition ?? registration.definition;\n  const name =\n    toOptionalNonEmptyString((runtimeDefinition as { name?: unknown }).name) ??\n    toOptionalNonEmptyString((registration.definition as { name?: unknown }).name) ??\n    providerName;\n  if (!name) {\n    return null;\n  }\n  const embedBatch = (runtimeDefinition as { embedBatch?: unknown; embed_batch?: unknown }).embedBatch;\n  const embedBatchSnake = (runtimeDefinition as { embedBatch?: unknown; embed_batch?: unknown }).embed_batch;\n  const embed = (runtimeDefinition as { embed?: unknown }).embed;\n  const resolvedEmbedBatch =\n    typeof embedBatch === \"function\"\n      ? (embedBatch as ExtensionEmbedBatch)\n      : typeof embedBatchSnake === \"function\"\n        ? (embedBatchSnake as ExtensionEmbedBatch)\n        : undefined;\n  const resolvedEmbed = typeof embed === \"function\" ? (embed as ExtensionEmbedOne) : undefined;\n  if (!resolvedEmbedBatch && !resolvedEmbed) {\n    return null;\n  }\n  return {\n    name,\n    embedBatch: resolvedEmbedBatch,\n    embed: resolvedEmbed,\n  };\n}\n\nfunction resolveExtensionVectorUpsert(settings: PmSettings): { name: string; upsert: ExtensionVectorUpsert } | null {\n  const registrations = getActiveExtensionRegistrations();\n  const adapterName = toOptionalNonEmptyString(settings.vector_store?.adapter);\n  const registration = resolveRegisteredVectorStoreAdapter(registrations, adapterName);\n  if (!registration) {\n    return null;\n  }\n  const runtimeDefinition = registration.runtime_definition ?? registration.definition;\n  const name =\n    toOptionalNonEmptyString((runtimeDefinition as { name?: unknown }).name) ??\n    toOptionalNonEmptyString((registration.definition as { name?: unknown }).name) ??\n    adapterName;\n  const upsert = (runtimeDefinition as { upsert?: unknown }).upsert;\n  if (!name || typeof upsert !== \"function\") {\n    return null;\n  }\n  return {\n    name,\n    upsert: upsert as ExtensionVectorUpsert,\n  };\n}\n\nfunction assertVector(value: unknown, context: string): number[] {\n  if (!Array.isArray(value) || value.some((entry) => typeof entry !== \"number\" || !Number.isFinite(entry))) {\n    throw new PmCliError(`Invalid vector returned by ${context}`, EXIT_CODE.GENERIC_FAILURE);\n  }\n  return value;\n}\n\nasync function executeExtensionEmbedding(\n  extensionEmbedding: { name: string; embedBatch?: ExtensionEmbedBatch; embed?: ExtensionEmbedOne },\n  settings: PmSettings,\n  corpusInputs: string[],\n): Promise<number[][]> {\n  const model = settings.search?.embedding_model?.trim() || \"text-embedding-3-small\";\n  if (extensionEmbedding.embedBatch) {\n    const vectors = await Promise.resolve(\n      extensionEmbedding.embedBatch({\n        inputs: corpusInputs,\n        settings,\n        model,\n      }),\n    );\n    if (!Array.isArray(vectors)) {\n      throw new PmCliError(\n        `Extension search provider \"${extensionEmbedding.name}\" embedBatch must return an array of vectors`,\n        EXIT_CODE.GENERIC_FAILURE,\n      );\n    }\n    return vectors.map((vector, index) =>\n      assertVector(vector, `extension search provider \"${extensionEmbedding.name}\" embedBatch output at index ${index}`),\n    );\n  }\n  if (!extensionEmbedding.embed) {\n    throw new PmCliError(\n      `Extension search provider \"${extensionEmbedding.name}\" does not implement embed/embedBatch`,\n      EXIT_CODE.GENERIC_FAILURE,\n    );\n  }\n  const vectors: number[][] = [];\n  for (const [index, input] of corpusInputs.entries()) {\n    const vector = await Promise.resolve(\n      extensionEmbedding.embed({\n        input,\n        settings,\n        model,\n      }),\n    );\n    vectors.push(assertVector(vector, `extension search provider \"${extensionEmbedding.name}\" embed output at index ${index}`));\n  }\n  return vectors;\n}\n\nexport async function runReindex(options: ReindexOptions, global: GlobalOptions): Promise<ReindexResult> {\n  const requestedMode = parseMode(options.mode);\n  const progressEnabled = shouldEmitReindexProgress(options);\n  emitReindexProgress(progressEnabled, `start mode=${requestedMode}`);\n  const pmRoot = resolvePmRoot(process.cwd(), global.path);\n  if (!(await pathExists(getSettingsPath(pmRoot)))) {\n    throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);\n  }\n\n  const settings = resolveSettingsWithSemanticRuntimeDefaults(await readSettings(pmRoot)).settings;\n  let releaseReindexLock: (() => Promise<void>) | null = null;\n  try {\n    releaseReindexLock = await acquireLock(\n      pmRoot,\n      REINDEX_LOCK_ID,\n      settings.locks.ttl_seconds,\n      process.env.PM_AUTHOR ?? \"pm-reindex\",\n      false,\n      settings.governance.force_required_for_stale_lock,\n    );\n  } catch (error: unknown) {\n    if (error instanceof PmCliError && error.exitCode === EXIT_CODE.CONFLICT) {\n      throw new PmCliError(\n        \"Another pm reindex run is already active for this project. Wait for it to finish before starting a new keyword, semantic, or hybrid reindex.\",\n        EXIT_CODE.CONFLICT,\n        {\n          code: \"reindex_already_running\",\n          type: \"urn:pm-cli:error:reindex_already_running\",\n          why: \"Semantic reindex can be expensive and duplicate runs compete for the same local embedding model and vector store.\",\n          nextSteps: [\n            \"Check active pm reindex processes before starting another reindex.\",\n            \"Rerun with --progress when you need non-interactive visibility.\",\n          ],\n        },\n      );\n    }\n    throw error;\n  }\n\n  try {\n  const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());\n  const extensionEmbedding = resolveExtensionSearchEmbedding(settings);\n  const extensionVectorUpsert = resolveExtensionVectorUpsert(settings);\n  let activeEmbeddingProvider: ReturnType<typeof resolveEmbeddingProviders>[\"active\"] = null;\n  let activeVectorStore: ReturnType<typeof resolveVectorStores>[\"active\"] = null;\n  if (requestedMode !== \"keyword\") {\n    const providerResolution = resolveEmbeddingProviders(settings);\n    if (!providerResolution.active && !extensionEmbedding) {\n      throw new PmCliError(\n        `Reindex mode '${requestedMode}' requires a configured embedding provider in settings.providers.openai/settings.providers.ollama or an extension provider selected by settings.search.provider`,\n        EXIT_CODE.USAGE,\n      );\n    }\n    const vectorResolution = resolveVectorStores(settings);\n    if (!vectorResolution.active && !extensionVectorUpsert) {\n      throw new PmCliError(\n        `Reindex mode '${requestedMode}' requires a configured vector store in settings.vector_store.qdrant/settings.vector_store.lancedb or an extension adapter selected by settings.vector_store.adapter`,\n        EXIT_CODE.USAGE,\n      );\n    }\n    activeEmbeddingProvider = providerResolution.active;\n    activeVectorStore = vectorResolution.active;\n  }\n  const mode = requestedMode;\n  emitReindexProgress(progressEnabled, \"loading item corpus\");\n  const loadedCandidates = await loadDocumentCandidates(pmRoot, settings.item_format, typeRegistry.type_to_folder, settings.schema);\n  const reindexWarnings = [...loadedCandidates.warnings];\n  const documentCandidates = loadedCandidates.candidates;\n  const metadataDocuments: ItemDocument[] = documentCandidates.map((candidate) => ({\n    metadata: candidate.metadata,\n    body: typeof candidate.body === \"string\" ? candidate.body : \"\",\n  }));\n  emitReindexProgress(progressEnabled, `loaded_items=${metadataDocuments.length}`);\n  const generatedAt = nowIso();\n\n  const manifest = {\n    version: 1,\n    mode,\n    generated_at: generatedAt,\n    total_items: metadataDocuments.length,\n    items: metadataDocuments.map((document) => ({\n      id: document.metadata.id,\n      type: document.metadata.type,\n      status: document.metadata.status,\n      priority: document.metadata.priority,\n      updated_at: document.metadata.updated_at,\n    })),\n  };\n\n  const manifestPath = path.join(pmRoot, MANIFEST_PATH);\n  const embeddingsPath = path.join(pmRoot, EMBEDDINGS_PATH);\n\n  let documentsForKeywordArtifacts =\n    mode === \"keyword\"\n      ? await hydrateDocuments(pmRoot, documentCandidates, settings.schema, reindexWarnings)\n      : metadataDocuments;\n  const semanticWarnings: string[] = [];\n  const vectorizationLedgerEntries: Record<string, string> = {};\n  const semanticSummary = {\n    enabled: mode !== \"keyword\",\n    stale_items: 0,\n    unchanged_items: 0,\n    embedded_items: 0,\n    vector_upserted: 0,\n    batches_completed: 0,\n  };\n  if (mode !== \"keyword\" && metadataDocuments.length > 0) {\n    const ledger = await readVectorizationStatusLedger(pmRoot);\n    semanticWarnings.push(...ledger.warnings);\n    const staleIds = new Set(\n      metadataDocuments\n        .filter((document) => ledger.entries[document.metadata.id] !== document.metadata.updated_at)\n        .map((document) => document.metadata.id),\n    );\n    const staleDocuments = staleIds.size > 0\n      ? await hydrateDocuments(pmRoot, documentCandidates, settings.schema, reindexWarnings, staleIds)\n      : [];\n    const freshDocuments = metadataDocuments.length - staleDocuments.length;\n    semanticSummary.stale_items = staleDocuments.length;\n    semanticSummary.unchanged_items = freshDocuments;\n    for (const document of metadataDocuments) {\n      vectorizationLedgerEntries[document.metadata.id] = document.metadata.updated_at;\n    }\n    if (staleDocuments.length === 0) {\n      emitReindexProgress(progressEnabled, `embedding_skipped unchanged_items=${freshDocuments}`);\n      semanticWarnings.push(`search_semantic_reindex_skipped_unchanged:count=${freshDocuments}`);\n    } else {\n      emitReindexProgress(progressEnabled, `embedding_start items=${staleDocuments.length} unchanged_items=${freshDocuments}`);\n      const semanticProviderName = activeEmbeddingProvider?.name ?? extensionEmbedding?.name;\n      const corpusInputs = staleDocuments.map((document) => buildSemanticCorpusInput(document, { providerName: semanticProviderName }));\n      let vectors: number[][] = [];\n      if (extensionEmbedding) {\n        try {\n          vectors = await executeExtensionEmbedding(extensionEmbedding, settings, corpusInputs);\n        } catch (error: unknown) {\n          if (!activeEmbeddingProvider) {\n            throw new PmCliError(\n              `Extension search provider \"${extensionEmbedding.name}\" failed to generate embeddings: ${error instanceof Error ? error.message : String(error)}`,\n              EXIT_CODE.GENERIC_FAILURE,\n            );\n          }\n          semanticWarnings.push(\n            `Extension search provider \"${extensionEmbedding.name}\" failed; falling back to built-in provider (${error instanceof Error ? error.message : String(error)})`,\n          );\n        }\n      }\n      if (vectors.length === 0) {\n        if (!activeEmbeddingProvider) {\n          throw new PmCliError(\n            `No embedding executor available for reindex mode '${requestedMode}'`,\n            EXIT_CODE.USAGE,\n          );\n        }\n        const embeddingResult = await executeEmbeddingBatchesWithRetry(activeEmbeddingProvider, settings, corpusInputs, {\n          onProgress: (event) => {\n            if (event.phase === \"complete\") {\n              semanticSummary.batches_completed = event.batch_index;\n            }\n            emitReindexProgress(\n              progressEnabled,\n              `embedding_batch_${event.phase} batch=${event.batch_index}/${event.batch_total} size=${event.batch_size} completed_inputs=${event.completed_inputs}/${event.total_inputs}`,\n            );\n          },\n        });\n        semanticWarnings.push(...embeddingResult.warnings);\n        vectors = embeddingResult.vectors;\n      }\n      emitReindexProgress(progressEnabled, `embedding_complete vectors=${vectors.length}`);\n      if (vectors.length !== staleDocuments.length) {\n        throw new PmCliError(\n          `Embedding output size mismatch (expected ${staleDocuments.length}, received ${vectors.length})`,\n          EXIT_CODE.GENERIC_FAILURE,\n        );\n      }\n      const points = staleDocuments.map((document, index) => ({\n        id: document.metadata.id,\n        vector: assertVector(vectors[index], `reindex embeddings output at index ${index}`),\n        payload: {\n          id: document.metadata.id,\n          type: document.metadata.type,\n          status: document.metadata.status,\n          priority: document.metadata.priority,\n          updated_at: document.metadata.updated_at,\n        },\n      }));\n      semanticSummary.embedded_items = vectors.length;\n      if (extensionVectorUpsert) {\n        try {\n          emitReindexProgress(progressEnabled, `vector_upsert_start adapter=${extensionVectorUpsert.name} points=${points.length}`);\n          await Promise.resolve(\n            extensionVectorUpsert.upsert({\n              points,\n              settings,\n            }),\n          );\n          semanticSummary.vector_upserted = points.length;\n          emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${extensionVectorUpsert.name}`);\n        } catch (error: unknown) {\n          if (!activeVectorStore) {\n            throw new PmCliError(\n              `Extension vector adapter \"${extensionVectorUpsert.name}\" failed to upsert vectors: ${error instanceof Error ? error.message : String(error)}`,\n              EXIT_CODE.GENERIC_FAILURE,\n            );\n          }\n          semanticWarnings.push(\n            `Extension vector adapter \"${extensionVectorUpsert.name}\" failed; falling back to built-in vector store (${error instanceof Error ? error.message : String(error)})`,\n          );\n          emitReindexProgress(progressEnabled, \"vector_upsert_fallback built_in_store\");\n          await executeVectorUpsert(activeVectorStore, points);\n          semanticSummary.vector_upserted = points.length;\n          emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${activeVectorStore.name}`);\n        }\n      } else if (activeVectorStore) {\n        emitReindexProgress(progressEnabled, `vector_upsert_start adapter=${activeVectorStore.name} points=${points.length}`);\n        await executeVectorUpsert(activeVectorStore, points);\n        semanticSummary.vector_upserted = points.length;\n        emitReindexProgress(progressEnabled, `vector_upsert_complete adapter=${activeVectorStore.name}`);\n      } else {\n        throw new PmCliError(\n          `No vector upsert executor available for reindex mode '${requestedMode}'`,\n          EXIT_CODE.USAGE,\n        );\n      }\n      if (freshDocuments > 0) {\n        semanticWarnings.push(`search_semantic_reindex_skipped_unchanged:count=${freshDocuments}`);\n      }\n      const staleDocumentsById = new Map(staleDocuments.map((document) => [document.metadata.id, document]));\n      documentsForKeywordArtifacts = metadataDocuments.map(\n        (document) => staleDocumentsById.get(document.metadata.id) ?? document,\n      );\n    }\n  }\n  const embeddingsLines = documentsForKeywordArtifacts.map((document) => JSON.stringify(buildKeywordRecord(document, mode))).join(\"\\n\");\n  emitReindexProgress(progressEnabled, \"writing keyword artifacts\");\n  await writeFileAtomic(manifestPath, `${JSON.stringify(manifest, null, 2)}\\n`);\n  await writeFileAtomic(embeddingsPath, `${embeddingsLines}\\n`);\n  const vectorizationWarnings: string[] = [];\n  if (mode !== \"keyword\") {\n    try {\n      emitReindexProgress(progressEnabled, \"writing vectorization status ledger\");\n      await writeVectorizationStatusLedger(pmRoot, vectorizationLedgerEntries);\n    } catch (error: unknown) {\n      vectorizationWarnings.push(\n        `search_vectorization_status_ledger_write_failed:${error instanceof Error ? error.message : String(error)}`,\n      );\n    }\n  }\n  const hookWarnings = [\n    ...(await runActiveOnWriteHooks({\n      path: manifestPath,\n      scope: \"project\",\n      op: \"reindex:manifest\",\n    })),\n    ...(await runActiveOnWriteHooks({\n      path: embeddingsPath,\n      scope: \"project\",\n      op: \"reindex:embeddings\",\n    })),\n    ...(await runActiveOnIndexHooks({\n      mode,\n      total_items: metadataDocuments.length,\n    })),\n  ];\n  emitReindexProgress(progressEnabled, \"done\");\n\n  return {\n    ok: true,\n    mode,\n    total_items: metadataDocuments.length,\n    semantic: semanticSummary,\n    artifacts: {\n      manifest: MANIFEST_PATH,\n      embeddings: EMBEDDINGS_PATH,\n    },\n    warnings: [...reindexWarnings, ...semanticWarnings, ...vectorizationWarnings, ...hookWarnings],\n    generated_at: generatedAt,\n  };\n  } finally {\n    await releaseReindexLock?.();\n  }\n}\n"]}