@unbrained/pm-cli 2026.3.12 → 2026.5.1

package/dist/cli/commands/files.js

@@ -1,8 +1,13 @@
+import fs from "node:fs/promises";
+import path from "node:path";
+import fg from "fast-glob";
 import { pathExists } from "../../core/fs/fs-utils.js";
-import { parseCsvKv } from "../../core/item/parse.js";
+import { getActiveExtensionRegistrations } from "../../core/extensions/index.js";
+import { createStdinTokenResolver, parseCsvKv } from "../../core/item/parse.js";
+import { resolveItemTypeRegistry } from "../../core/item/type-registry.js";
 import { EXIT_CODE } from "../../core/shared/constants.js";
 import { PmCliError } from "../../core/shared/errors.js";
-import { locateItem, mutateItem, readLocatedItem } from "../../core/store/item-store.js";
+import { listAllFrontMatter, locateItem, mutateItem, readLocatedItem } from "../../core/store/item-store.js";
 import { getSettingsPath, resolvePmRoot } from "../../core/store/paths.js";
 import { readSettings } from "../../core/store/settings.js";
 import { SCOPE_VALUES } from "../../types/index.js";
@@ -33,6 +38,32 @@ function parseAddEntries(raw) {
         };
     });
 }
+function parseAddGlobEntries(raw) {
+    if (!raw)
+        return [];
+    return raw.map((entry) => {
+        const trimmed = entry.trim();
+        if (!trimmed) {
+            throw new PmCliError("--add-glob requires a glob pattern value", EXIT_CODE.USAGE);
+        }
+        if (trimmed.includes("=") || /^(?:[-*+]\s+)?(?:pattern|glob|path)\s*[:=]/i.test(trimmed) || trimmed.startsWith("```")) {
+            const kv = parseCsvKv(trimmed, "--add-glob");
+            const pattern = kv.pattern?.trim() || kv.glob?.trim() || kv.path?.trim();
+            if (!pattern) {
+                throw new PmCliError("--add-glob key/value form requires pattern=<glob>", EXIT_CODE.USAGE);
+            }
+            return {
+                pattern,
+                scope: ensureScope(kv.scope),
+                note: kv.note?.trim() || undefined,
+            };
+        }
+        return {
+            pattern: trimmed,
+            scope: "project",
+        };
+    });
+}
 function parseRemoveEntries(raw) {
     if (!raw)
         return [];
@@ -41,7 +72,7 @@ function parseRemoveEntries(raw) {
         if (!trimmed) {
             throw new PmCliError("--remove requires a path value", EXIT_CODE.USAGE);
         }
-        if (trimmed.includes("=")) {
+        if (trimmed.includes("=") || /^(?:[-*+]\s+)?path\s*[:=]/i.test(trimmed) || trimmed.startsWith("```")) {
             const kv = parseCsvKv(trimmed, "--remove");
             if (!kv.path) {
                 throw new PmCliError("--remove key/value form requires path=<value>", EXIT_CODE.USAGE);
@@ -51,27 +82,294 @@ function parseRemoveEntries(raw) {
         return trimmed;
     });
 }
+function parseMigrateEntries(raw) {
+    if (!raw)
+        return [];
+    return raw.map((entry) => {
+        const kv = parseCsvKv(entry, "--migrate");
+        const from = kv.from?.trim();
+        const to = kv.to?.trim();
+        if (!from || !to) {
+            throw new PmCliError("--migrate requires from=<value> and to=<value>", EXIT_CODE.USAGE);
+        }
+        return { from, to };
+    });
+}
+function applyPathMigrations(filePath, migrations) {
+    let next = filePath;
+    for (const migration of migrations) {
+        if (next.startsWith(migration.from)) {
+            next = `${migration.to}${next.slice(migration.from.length)}`;
+        }
+    }
+    return next;
+}
+function normalizeLinkedPath(value) {
+    return value.split(path.sep).join("/");
+}
+function normalizeCandidatePathForOutput(value) {
+    return normalizeLinkedPath(path.normalize(value));
+}
+function isPathInside(parentPath, childPath) {
+    const relative = path.relative(parentPath, childPath);
+    return relative === "" || (!relative.startsWith("..") && !path.isAbsolute(relative));
+}
+function linkedFileResolvedKey(linkedFile, projectRoot) {
+    const resolvedPath = path.isAbsolute(linkedFile.path)
+        ? path.resolve(linkedFile.path)
+        : path.resolve(projectRoot, linkedFile.path);
+    return `${normalizeCandidatePathForOutput(resolvedPath)}::${linkedFile.scope}`;
+}
+async function expandAddGlobEntries(entries) {
+    const expanded = [];
+    for (const entry of entries) {
+        const absolutePattern = path.isAbsolute(entry.pattern);
+        const matches = await fg(entry.pattern, {
+            cwd: process.cwd(),
+            absolute: absolutePattern,
+            onlyFiles: true,
+            dot: true,
+            unique: true,
+            followSymbolicLinks: true,
+        });
+        const sortedMatches = [...new Set(matches.map((match) => normalizeLinkedPath(path.normalize(match))))].sort((left, right) => left.localeCompare(right));
+        for (const matchedPath of sortedMatches) {
+            expanded.push({
+                path: matchedPath,
+                scope: entry.scope,
+                note: entry.note,
+            });
+        }
+    }
+    return expanded;
+}
+function fileKey(value) {
+    return `${value.path}::${value.scope}`;
+}
+function sortLinkedFiles(files) {
+    return [...files].sort((left, right) => {
+        const byPath = left.path.localeCompare(right.path);
+        if (byPath !== 0)
+            return byPath;
+        return left.scope.localeCompare(right.scope);
+    });
+}
+function dedupeLinkedFiles(files) {
+    return [...new Map(files.map((entry) => [fileKey(entry), entry])).values()].map((entry) => ({
+        ...entry,
+        note: entry.note?.trim() || undefined,
+    }));
+}
+async function validateLinkedFilePaths(paths) {
+    const uniquePaths = [...new Set(paths)].sort((left, right) => left.localeCompare(right));
+    const existingFiles = [];
+    const missingPaths = [];
+    const nonFilePaths = [];
+    for (const relativePath of uniquePaths) {
+        const resolvedPath = path.isAbsolute(relativePath) ? relativePath : path.resolve(process.cwd(), relativePath);
+        try {
+            const stats = await fs.stat(resolvedPath);
+            if (stats.isFile()) {
+                existingFiles.push(relativePath);
+            }
+            else {
+                nonFilePaths.push(relativePath);
+            }
+        }
+        catch (error) {
+            if (typeof error === "object" && error !== null && "code" in error && error.code === "ENOENT") {
+                missingPaths.push(relativePath);
+                continue;
+            }
+            nonFilePaths.push(relativePath);
+        }
+    }
+    return {
+        checked: uniquePaths.length,
+        existing_files: existingFiles,
+        missing_paths: missingPaths,
+        non_file_paths: nonFilePaths,
+    };
+}
+function buildLinkedFileAudit(paths, allItems) {
+    const index = new Map();
+    for (const item of allItems) {
+        for (const linkedFile of item.files ?? []) {
+            const seen = index.get(linkedFile.path) ?? new Set();
+            seen.add(item.id);
+            index.set(linkedFile.path, seen);
+        }
+    }
+    return [...new Set(paths)]
+        .sort((left, right) => left.localeCompare(right))
+        .map((linkedPath) => {
+        const linkedIds = [...(index.get(linkedPath) ?? new Set())].sort((left, right) => left.localeCompare(right));
+        return {
+            path: linkedPath,
+            linked_by_count: linkedIds.length,
+            linked_item_ids: linkedIds,
+        };
+    });
+}
+function collectTextReferences(value, fieldPath, references) {
+    if (typeof value === "string") {
+        const trimmed = value.trim();
+        if (trimmed.length > 0) {
+            references.push({ field: fieldPath, value: trimmed });
+        }
+        return;
+    }
+    if (Array.isArray(value)) {
+        value.forEach((entry, index) => collectTextReferences(entry, `${fieldPath}[${index}]`, references));
+        return;
+    }
+    if (typeof value === "object" && value !== null) {
+        for (const [key, nested] of Object.entries(value)) {
+            collectTextReferences(nested, fieldPath ? `${fieldPath}.${key}` : key, references);
+        }
+    }
+}
+function collectItemTextReferences(document) {
+    const references = [];
+    collectTextReferences(document.front_matter, "front_matter", references);
+    collectTextReferences(document.body, "body", references);
+    return references;
+}
+function cleanupPathToken(value) {
+    let next = value.trim();
+    next = next.replace(/^[`"'<([{]+/u, "");
+    next = next.replace(/[`"'>)\]},;!?]+$/u, "");
+    next = next.replace(/[.]+$/u, "");
+    next = next.replace(/:(?:\d+)(?::\d+)?$/u, "");
+    next = next.replace(/[.]+$/u, "");
+    return next;
+}
+function extractRawPathReferences(references) {
+    const rawReferences = [];
+    const absolutePattern = /(?:[A-Za-z]:[\\/]|\/)[^\s"'`<>()\[\]{},;]+/gu;
+    const relativePattern = /(?:\.{1,2}[\\/])?(?:(?:[A-Za-z0-9_.@-]+[\\/])+[A-Za-z0-9_.@-]+|[A-Za-z0-9_.@-]+\.[A-Za-z0-9][A-Za-z0-9._-]*)/gu;
+    for (const reference of references) {
+        const seenInField = new Set();
+        for (const pattern of [absolutePattern, relativePattern]) {
+            pattern.lastIndex = 0;
+            for (const match of reference.value.matchAll(pattern)) {
+                const token = cleanupPathToken(match[0] ?? "");
+                if (!token || seenInField.has(token)) {
+                    continue;
+                }
+                seenInField.add(token);
+                rawReferences.push({ field: reference.field, value: token });
+            }
+        }
+    }
+    return rawReferences;
+}
+async function resolveDiscoveredFile(rawPath, projectRoot) {
+    const absolutePath = path.isAbsolute(rawPath) ? path.resolve(rawPath) : path.resolve(projectRoot, rawPath);
+    let stats;
+    try {
+        stats = await fs.stat(absolutePath);
+    }
+    catch {
+        return undefined;
+    }
+    if (!stats.isFile()) {
+        return undefined;
+    }
+    if (isPathInside(projectRoot, absolutePath)) {
+        const relativePath = path.relative(projectRoot, absolutePath);
+        if (!relativePath || relativePath.startsWith("..") || path.isAbsolute(relativePath)) {
+            return undefined;
+        }
+        return {
+            path: normalizeCandidatePathForOutput(relativePath),
+            scope: "project",
+        };
+    }
+    return {
+        path: normalizeCandidatePathForOutput(absolutePath),
+        scope: "global",
+    };
+}
+async function discoverReferencedFiles(document, projectRoot) {
+    const existingResolvedKeys = new Set((document.front_matter.files ?? []).map((entry) => linkedFileResolvedKey(entry, projectRoot)));
+    const grouped = new Map();
+    const rawReferences = extractRawPathReferences(collectItemTextReferences(document));
+    for (const reference of rawReferences) {
+        const resolved = await resolveDiscoveredFile(reference.value, projectRoot);
+        if (!resolved) {
+            continue;
+        }
+        const key = linkedFileResolvedKey(resolved, projectRoot);
+        const existing = grouped.get(key) ?? {
+            path: resolved.path,
+            scope: resolved.scope,
+            sourceFields: new Set(),
+            originalPaths: new Set(),
+            sourceCount: 0,
+        };
+        existing.sourceFields.add(reference.field);
+        existing.originalPaths.add(reference.value);
+        existing.sourceCount += 1;
+        grouped.set(key, existing);
+    }
+    return [...grouped.entries()]
+        .map(([key, entry]) => ({
+        path: entry.path,
+        scope: entry.scope,
+        status: existingResolvedKeys.has(key) ? "already_linked" : "addable",
+        source_count: entry.sourceCount,
+        source_fields: [...entry.sourceFields].sort((left, right) => left.localeCompare(right)),
+        original_paths: [...entry.originalPaths].sort((left, right) => left.localeCompare(right)),
+    }))
+        .sort((left, right) => {
+        const byStatus = left.status.localeCompare(right.status);
+        if (byStatus !== 0)
+            return byStatus;
+        const byPath = left.path.localeCompare(right.path);
+        if (byPath !== 0)
+            return byPath;
+        return left.scope.localeCompare(right.scope);
+    });
+}
 export async function runFiles(id, options, global) {
+    const stdinResolver = createStdinTokenResolver();
     const pmRoot = resolvePmRoot(process.cwd(), global.path);
     if (!(await pathExists(getSettingsPath(pmRoot)))) {
         throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);
     }
     const settings = await readSettings(pmRoot);
-    const adds = parseAddEntries(options.add);
-    const removes = parseRemoveEntries(options.remove);
-    const shouldMutate = adds.length > 0 || removes.length > 0;
+    const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());
+    const resolvedAdds = await stdinResolver.resolveList(options.add, "--add");
+    const resolvedAddGlobs = await stdinResolver.resolveList(options.addGlob, "--add-glob");
+    const resolvedRemoves = await stdinResolver.resolveList(options.remove, "--remove");
+    const resolvedMigrations = await stdinResolver.resolveList(options.migrate, "--migrate");
+    const parsedAdds = parseAddEntries(resolvedAdds);
+    const addGlobs = parseAddGlobEntries(resolvedAddGlobs);
+    const expandedGlobAdds = await expandAddGlobEntries(addGlobs);
+    const adds = [...parsedAdds, ...expandedGlobAdds];
+    const removes = parseRemoveEntries(resolvedRemoves);
+    const migrations = parseMigrateEntries(resolvedMigrations);
+    const shouldMutate = adds.length > 0 || removes.length > 0 || migrations.length > 0;
     if (!shouldMutate) {
-        const located = await locateItem(pmRoot, id, settings.id_prefix);
+        const located = await locateItem(pmRoot, id, settings.id_prefix, settings.item_format, typeRegistry.type_to_folder);
         if (!located) {
             throw new PmCliError(`Item ${id} not found`, EXIT_CODE.NOT_FOUND);
         }
-        const loaded = await readLocatedItem(located);
+        const loaded = await readLocatedItem(located, { schema: settings.schema });
         const files = loaded.document.front_matter.files ?? [];
         return {
             id: located.id,
             files,
             changed: false,
             count: files.length,
+            validation: options.validatePaths ? await validateLinkedFilePaths(files.map((entry) => entry.path)) : undefined,
+            audit: options.audit
+                ? buildLinkedFileAudit(files.map((entry) => entry.path), (await listAllFrontMatter(pmRoot, settings.item_format, typeRegistry.type_to_folder, undefined, settings.schema)).map((entry) => ({
+                    id: entry.id,
+                    files: entry.files,
+                })))
+                : undefined,
         };
     }
     const author = resolveAuthor(options.author, settings.author_default);
@@ -85,29 +383,161 @@ export async function runFiles(id, options, global) {
         force: options.force,
         mutate(document) {
             const next = [...(document.front_matter.files ?? [])];
-            for (const add of adds) {
+            let migrationCount = 0;
+            if (migrations.length > 0) {
+                for (let index = 0; index < next.length; index += 1) {
+                    const migratedPath = applyPathMigrations(next[index].path, migrations);
+                    if (migratedPath !== next[index].path) {
+                        next[index] = { ...next[index], path: migratedPath };
+                        migrationCount += 1;
+                    }
+                }
+            }
+            const migratedAdds = adds.map((entry) => {
+                const migratedPath = applyPathMigrations(entry.path, migrations);
+                if (migratedPath !== entry.path) {
+                    migrationCount += 1;
+                }
+                return {
+                    ...entry,
+                    path: migratedPath,
+                };
+            });
+            const migratedRemoves = removes.map((entry) => applyPathMigrations(entry, migrations));
+            for (const add of migratedAdds) {
                 const exists = next.some((entry) => entry.path === add.path && entry.scope === add.scope);
                 if (!exists) {
                     next.push(add);
                 }
             }
-            if (removes.length > 0) {
+            if (migratedRemoves.length > 0) {
                 for (let i = next.length - 1; i >= 0; i -= 1) {
-                    if (removes.includes(next[i].path)) {
+                    if (migratedRemoves.includes(next[i].path)) {
                         next.splice(i, 1);
                     }
                 }
             }
-            document.front_matter.files = next;
-            return { changedFields: ["files"] };
+            const deduped = dedupeLinkedFiles(next);
+            const normalized = options.appendStable ? deduped : sortLinkedFiles(deduped);
+            if (normalized.length > 0) {
+                document.front_matter.files = normalized;
+            }
+            else {
+                delete document.front_matter.files;
+            }
+            return { changedFields: ["files"], warnings: migrationCount > 0 ? [`path_migrations_applied:${migrationCount}`] : [] };
         },
     });
     const files = result.item.files ?? [];
+    const migrationWarning = result.warnings.find((warning) => warning.startsWith("path_migrations_applied:"));
+    const migrationCount = migrationWarning ? Number(migrationWarning.split(":")[1] ?? "0") : 0;
+    const allItems = options.audit
+        ? (await listAllFrontMatter(pmRoot, settings.item_format, typeRegistry.type_to_folder, undefined, settings.schema)).map((entry) => ({
+            id: entry.id,
+            files: entry.files,
+        }))
+        : [];
     return {
         id: result.item.id,
         files,
         changed: true,
         count: files.length,
+        migrations_applied: migrationCount > 0 ? migrationCount : undefined,
+        validation: options.validatePaths ? await validateLinkedFilePaths(files.map((entry) => entry.path)) : undefined,
+        audit: options.audit ? buildLinkedFileAudit(files.map((entry) => entry.path), allItems) : undefined,
+    };
+}
+export async function runFilesDiscover(id, options, global) {
+    const pmRoot = resolvePmRoot(process.cwd(), global.path);
+    if (!(await pathExists(getSettingsPath(pmRoot)))) {
+        throw new PmCliError(`Tracker is not initialized at ${pmRoot}. Run pm init first.`, EXIT_CODE.NOT_FOUND);
+    }
+    const settings = await readSettings(pmRoot);
+    const typeRegistry = resolveItemTypeRegistry(settings, getActiveExtensionRegistrations());
+    const located = await locateItem(pmRoot, id, settings.id_prefix, settings.item_format, typeRegistry.type_to_folder);
+    if (!located) {
+        throw new PmCliError(`Item ${id} not found`, EXIT_CODE.NOT_FOUND);
+    }
+    const loaded = await readLocatedItem(located, { schema: settings.schema });
+    const candidates = await discoverReferencedFiles(loaded.document, process.cwd());
+    const addableCandidates = candidates.filter((candidate) => candidate.status === "addable");
+    const skippedExisting = candidates.filter((candidate) => candidate.status === "already_linked");
+    const requestedApply = options.apply === true;
+    const note = options.note?.trim() || "discovered from item text";
+    if (!requestedApply || addableCandidates.length === 0) {
+        const files = loaded.document.front_matter.files ?? [];
+        return {
+            id: located.id,
+            files,
+            changed: false,
+            apply: requestedApply,
+            count: files.length,
+            candidate_count: candidates.length,
+            addable_count: addableCandidates.length,
+            added_count: 0,
+            skipped_existing_count: skippedExisting.length,
+            candidates,
+            added: [],
+            skipped_existing: skippedExisting,
+        };
+    }
+    const author = resolveAuthor(options.author, settings.author_default);
+    const discoveredAdds = addableCandidates.map((candidate) => ({
+        path: candidate.path,
+        scope: candidate.scope,
+        note,
+    }));
+    const result = await mutateItem({
+        pmRoot,
+        settings,
+        id,
+        op: "files_discover",
+        author,
+        message: options.message ?? "Discover referenced file links",
+        force: options.force,
+        mutate(document) {
+            const next = [...(document.front_matter.files ?? [])];
+            const existingResolvedKeys = new Set(next.map((entry) => linkedFileResolvedKey(entry, process.cwd())));
+            const appliedAdds = [];
+            for (const add of discoveredAdds) {
+                const resolvedKey = linkedFileResolvedKey(add, process.cwd());
+                if (existingResolvedKeys.has(resolvedKey)) {
+                    continue;
+                }
+                next.push(add);
+                existingResolvedKeys.add(resolvedKey);
+                appliedAdds.push(add);
+            }
+            const deduped = dedupeLinkedFiles(next);
+            const normalized = options.appendStable ? deduped : sortLinkedFiles(deduped);
+            if (normalized.length > 0) {
+                document.front_matter.files = normalized;
+            }
+            else {
+                delete document.front_matter.files;
+            }
+            return {
+                changedFields: appliedAdds.length > 0 ? ["files"] : [],
+                warnings: appliedAdds.length !== discoveredAdds.length ? [`files_discover_skipped_existing:${discoveredAdds.length - appliedAdds.length}`] : [],
+            };
+        },
+    });
+    const files = result.item.files ?? [];
+    const addedResolvedKeys = new Set(discoveredAdds.map((entry) => linkedFileResolvedKey(entry, process.cwd())));
+    const added = files.filter((entry) => addedResolvedKeys.has(linkedFileResolvedKey(entry, process.cwd())));
+    return {
+        id: result.item.id,
+        files,
+        changed: added.length > 0,
+        apply: true,
+        count: files.length,
+        candidate_count: candidates.length,
+        addable_count: addableCandidates.length,
+        added_count: added.length,
+        skipped_existing_count: skippedExisting.length,
+        candidates,
+        added,
+        skipped_existing: skippedExisting,
     };
 }
 //# sourceMappingURL=files.js.map

package/dist/cli/commands/files.js.map

@@ -1 +1 @@
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package/dist/cli/commands/gc.d.ts

@@ -1,9 +1,19 @@
 import type { GlobalOptions } from "../../core/shared/command-types.js";
+declare const GC_SCOPE_VALUES: readonly ["index", "embeddings", "runtime"];
+type GcScope = (typeof GC_SCOPE_VALUES)[number];
+export interface GcCommandOptions {
+    dryRun?: boolean;
+    scope?: string[];
+}
 export interface GcResult {
     ok: boolean;
+    dry_run: boolean;
+    scope: GcScope[];
     removed: string[];
     retained: string[];
     warnings: string[];
+    guidance: string[];
     generated_at: string;
 }
-export declare function runGc(global: GlobalOptions): Promise<GcResult>;
+export declare function runGc(global: GlobalOptions, options?: GcCommandOptions): Promise<GcResult>;
+export {};