@trustify-da/trustify-da-javascript-client 0.3.0-ea.320ec49 → 0.3.0-ea.329b3cf

package/README.md

@@ -688,14 +688,14 @@ This increasing the chances and the probability that the automatic installation
 ###### Usage
 A New setting is introduced - `TRUSTIFY_DA_PYTHON_INSTALL_BEST_EFFORTS` (as both env variable/key in `options` object)
 1. `TRUSTIFY_DA_PYTHON_INSTALL_BEST_EFFORTS`="false" - install requirements.txt while respecting declared versions for all packages.
-2. `TRUSTIFY_DA_PYTHON_INSTALL_BEST_EFFORTS`="true" - install all packages from requirements.txt, not respecting the declared version, but trying to install a version tailored for the used python version. When using this setting, you must set setting `MATCH_MANIFEST_VERSIONS` to 'false'.
+2. `TRUSTIFY_DA_PYTHON_INSTALL_BEST_EFFORTS`="true" - install all packages from requirements.txt, not respecting the declared version, but trying to install a version tailored for the used python version. When using this setting, you must set `TRUSTIFY_DA_PYTHON_VIRTUAL_ENV` to 'true' and `MATCH_MANIFEST_VERSIONS` to 'false'.
 
 ##### Using `pipdeptree`
 By default, The API algorithm will use native commands of PIP installer as data source to build the dependency tree.
 It's also possible to use the lightweight Python PIP utility [pipdeptree](https://pypi.org/project/pipdeptree/) as data source instead. In order to activate this, you need to set the environment variable/option `TRUSTIFY_DA_PIP_USE_DEP_TREE` to 'true'.
 
 #### Toggle Red Hat Trusted Content recommendations
-Both the HTML-based report and JSON response will by default contain recommendations for migrating to Red Hat-based Trusted Content repositories. This feature can be disabled by setting `TRUSTIFY_DA_RECOMMENDATIONS_ENABLED` to 'false' via environment variables or options.
+Both the HTML-based report and JSON response will by default contain recommendations for migrating to Red Hat-based Trusted Content repositories. This feature can be disabled by setting `TRUSTIFY_DA_RECOMMEND` to 'false' via environment variables or options.
 
 #### Additional CLI arguments
 For some ecosystems we support passing additional CLI arguments to the underlying tools. The following table outlines the supported ecosystems and the environment variable/option that configures this. Note that the arguments are expected to be in the format of a JSON array.

package/dist/package.json

@@ -35,32 +35,33 @@
         "config/**/*"
     ],
     "scripts": {
-        "lint": "eslint src test --ext js",
-        "lint:fix": "eslint src test --ext js --fix",
+        "lint": "eslint src test",
+        "lint:fix": "eslint src test --fix",
         "test": "c8 npm run tests",
         "tests": "mocha --config .mocharc.json",
         "tests:rep": "mocha --reporter-option maxDiffSize=0 --reporter json > unit-tests-result.json",
-        "pretest": "cp node_modules/tree-sitter-requirements/tree-sitter-requirements.wasm src/providers/tree-sitter-requirements.wasm && cp node_modules/tree-sitter-gomod/tree-sitter-gomod.wasm src/providers/tree-sitter-gomod.wasm",
+        "pretest": "cp node_modules/tree-sitter-requirements/tree-sitter-requirements.wasm src/providers/tree-sitter-requirements.wasm && cp node_modules/tree-sitter-gomod/tree-sitter-gomod.wasm src/providers/tree-sitter-gomod.wasm && cp node_modules/tree-sitter-containerfile/tree-sitter-containerfile.wasm src/providers/tree-sitter-containerfile.wasm",
         "precompile": "rm -rf dist",
         "compile": "tsc -p tsconfig.json",
         "compile:dev": "tsc -p tsconfig.dev.json",
-        "postcompile": "cp node_modules/tree-sitter-requirements/tree-sitter-requirements.wasm dist/src/providers/tree-sitter-requirements.wasm && cp node_modules/tree-sitter-gomod/tree-sitter-gomod.wasm dist/src/providers/tree-sitter-gomod.wasm"
+        "postcompile": "cp node_modules/tree-sitter-requirements/tree-sitter-requirements.wasm dist/src/providers/tree-sitter-requirements.wasm && cp node_modules/tree-sitter-gomod/tree-sitter-gomod.wasm dist/src/providers/tree-sitter-gomod.wasm && cp node_modules/tree-sitter-containerfile/tree-sitter-containerfile.wasm dist/src/providers/tree-sitter-containerfile.wasm"
     },
     "dependencies": {
         "@babel/core": "^7.23.2",
-        "@cyclonedx/cyclonedx-library": "^6.13.0",
+        "@cyclonedx/cyclonedx-library": "^10.0.0",
         "eslint-import-resolver-typescript": "^4.4.4",
         "fast-glob": "^3.3.3",
-        "fast-toml": "^0.5.4",
         "fast-xml-parser": "^5.3.4",
         "help": "^3.0.2",
-        "https-proxy-agent": "^7.0.6",
+        "https-proxy-agent": "^9.0.0",
         "js-yaml": "^4.1.1",
+        "jsonc-parser": "^3.3.1",
         "micromatch": "^4.0.8",
         "node-fetch": "^3.3.2",
-        "p-limit": "^4.0.0",
+        "p-limit": "^7.3.0",
         "packageurl-js": "~1.0.2",
         "smol-toml": "^1.6.0",
+        "tree-sitter-containerfile": "^0.8.1",
         "tree-sitter-gomod": "github:strum355/tree-sitter-go-mod#56326f2ad478892ace58ff247a97d492a3cbcdda",
         "tree-sitter-requirements": "github:Strum355/tree-sitter-requirements#d0261ee76b84253997fe70d7d397e78c006c3801",
         "web-tree-sitter": "^0.26.7",
@@ -68,23 +69,24 @@
     },
     "devDependencies": {
         "@babel/core": "^7.23.2",
-        "@trustify-da/trustify-da-api-model": "^2.0.7",
-        "@types/node": "^20.17.30",
+        "@eslint/js": "^10.0.0",
+        "@trustify-da/trustify-da-api-model": "^2.0.12",
+        "@types/node": "^25.9.1",
         "@types/which": "^3.0.4",
         "babel-plugin-rewire": "^1.2.0",
         "c8": "^11.0.0",
-        "chai": "^4.3.7",
-        "eslint": "^8.42.0",
+        "chai": "^6.2.2",
+        "eslint": "^10.4.1",
         "eslint-import-resolver-typescript": "^4.4.4",
-        "eslint-plugin-editorconfig": "^4.0.3",
-        "eslint-plugin-import": "^2.29.1",
+        "eslint-plugin-import-x": "^4.16.2",
         "esmock": "^2.6.2",
-        "mocha": "^10.2.0",
+        "globals": "^17.6.0",
+        "mocha": "^11.7.6",
         "msw": "^2.12.7",
-        "sinon": "^15.1.2",
-        "sinon-chai": "^3.7.0",
-        "typescript": "^5.1.3",
-        "which": "^5.0.0"
+        "sinon": "^22.0.0",
+        "sinon-chai": "^4.0.1",
+        "typescript": "^6.0.3",
+        "which": "^7.0.0"
     },
     "mocha": {
         "check-leaks": false,
@@ -112,12 +114,13 @@
         "reporter": [
             "html",
             "json",
+            "lcov",
             "text"
         ]
     },
-    "eslintIgnore": [
-        "index.js"
-    ],
+    "overrides": {
+        "tree-sitter": "0.22.4"
+    },
     "resolutions": {
         "@hapi/joi": "17.1.1"
     }

package/dist/src/analysis.d.ts

@@ -6,6 +6,7 @@ declare namespace _default {
     export { requestStackBatch };
     export { requestImages };
     export { validateToken };
+    export { appendAnalysisQueryParams };
 }
 export default _default;
 /**
@@ -16,7 +17,7 @@ export default _default;
  * @param {import("index.js").Options} [opts={}] - optional various options to pass along the application
  * @returns {Promise<import('@trustify-da/trustify-da-api-model/model/v5/AnalysisReport').AnalysisReport>}
  */
-declare function requestComponent(provider: import("./provider").Provider, manifest: string, url: string, opts?: import("index.js").Options): Promise<import("@trustify-da/trustify-da-api-model/model/v5/AnalysisReport").AnalysisReport>;
+declare function requestComponent(provider: any, manifest: string, url: string, opts?: any): Promise<any>;
 /**
  * Send a stack analysis request and get the report as 'text/html' or 'application/json'.
  * @param {import('./provider').Provider} provider - the provided data for constructing the request
@@ -26,7 +27,7 @@ declare function requestComponent(provider: import("./provider").Provider, manif
  * @param {import("index.js").Options} [opts={}] - optional various options to pass along the application
  * @returns {Promise<string|import('@trustify-da/trustify-da-api-model/model/v5/AnalysisReport').AnalysisReport>}
  */
-declare function requestStack(provider: import("./provider").Provider, manifest: string, url: string, html?: boolean, opts?: import("index.js").Options): Promise<string | import("@trustify-da/trustify-da-api-model/model/v5/AnalysisReport").AnalysisReport>;
+declare function requestStack(provider: any, manifest: string, url: string, html?: boolean, opts?: any): Promise<string | any>;
 /**
  * Send a batch stack analysis request for multiple manifests (SBOMs keyed by purl).
  * @param {Object.<string, object>} sbomByPurl - Map of root purl to CycloneDX SBOM object
@@ -36,9 +37,9 @@ declare function requestStack(provider: import("./provider").Provider, manifest:
  * @returns {Promise<string|Object.<string, import('@trustify-da/trustify-da-api-model/model/v5/AnalysisReport').AnalysisReport>>}
  */
 declare function requestStackBatch(sbomByPurl: {
+    [x: string]: object;
+}, url: string, html?: boolean, opts?: any): Promise<string | {
     [x: string]: any;
-}, url: string, html?: boolean, opts?: import("index.js").Options): Promise<string | {
-    [x: string]: import("@trustify-da/trustify-da-api-model/model/v5/AnalysisReport").AnalysisReport;
 }>;
 /**
  *
@@ -47,8 +48,8 @@ declare function requestStackBatch(sbomByPurl: {
  * @param {import("index.js").Options} [opts={}] - optional various options to pass along the application
  * @returns {Promise<string|Object.<string, import('@trustify-da/trustify-da-api-model/model/v5/AnalysisReport').AnalysisReport>>}
  */
-declare function requestImages(imageRefs: Array<string>, url: string, html?: boolean, opts?: import("index.js").Options): Promise<string | {
-    [x: string]: import("@trustify-da/trustify-da-api-model/model/v5/AnalysisReport").AnalysisReport;
+declare function requestImages(imageRefs: Array<string>, url: string, html?: boolean, opts?: any): Promise<string | {
+    [x: string]: any;
 }>;
 /**
  *
@@ -56,4 +57,10 @@ declare function requestImages(imageRefs: Array<string>, url: string, html?: boo
  * @param {import("index.js").Options} [opts={}] - optional various options to pass headers for t he validateToken Request
  * @return {Promise<number>} return the HTTP status Code of the response from the validate token request.
  */
-declare function validateToken(url: any, opts?: import("index.js").Options): Promise<number>;
+declare function validateToken(url: any, opts?: any): Promise<number>;
+/**
+ * Append common analysis query parameters (recommend, providers, sources) to a URL.
+ * @param {URL} url - the URL object to append query parameters to
+ * @param {import("index.js").Options} [opts={}] - options containing parameter overrides
+ */
+declare function appendAnalysisQueryParams(url: URL, opts?: any): void;

package/dist/src/analysis.js

@@ -6,7 +6,7 @@ import { generateImageSBOM, parseImageRef } from "./oci_image/utils.js";
 import { addProxyAgent, getCustom, getTokenHeaders, TRUSTIFY_DA_OPERATION_TYPE_HEADER, TRUSTIFY_DA_PACKAGE_MANAGER_HEADER } from "./tools.js";
 /** Media type for CycloneDX JSON batch payloads (batch-analysis API). */
 export const CYCLONEDX_JSON_MEDIA_TYPE = 'application/vnd.cyclonedx+json';
-export default { requestComponent, requestStack, requestStackBatch, requestImages, validateToken };
+export default { requestComponent, requestStack, requestStackBatch, requestImages, validateToken, appendAnalysisQueryParams };
 /**
  * Send a stack analysis request and get the report as 'text/html' or 'application/json'.
  * @param {import('./provider').Provider} provider - the provided data for constructing the request
@@ -20,6 +20,9 @@ async function requestStack(provider, manifest, url, html = false, opts = {}) {
     opts["source-manifest"] = Buffer.from(fs.readFileSync(manifest).toString()).toString('base64');
     opts["manifest-type"] = path.parse(manifest).base;
     let provided = await provider.provideStack(manifest, opts); // throws error if content providing failed
+    if (provided.batch) {
+        return requestStackBatch(JSON.parse(provided.content), url, html, opts);
+    }
     opts["source-manifest"] = "";
     opts[TRUSTIFY_DA_OPERATION_TYPE_HEADER.toUpperCase().replaceAll("-", "_")] = "stack-analysis";
     let startTime = new Date();
@@ -38,9 +41,7 @@ async function requestStack(provider, manifest, url, html = false, opts = {}) {
         body: provided.content
     }, opts);
     const finalUrl = new URL(`${url}/api/v5/analysis`);
-    if (opts['TRUSTIFY_DA_RECOMMENDATIONS_ENABLED'] === 'false') {
-        finalUrl.searchParams.append('recommend', 'false');
-    }
+    appendAnalysisQueryParams(finalUrl, opts);
     let resp = await fetch(finalUrl, fetchOptions);
     let result;
     if (resp.status === 200) {
@@ -79,6 +80,9 @@ async function requestStack(provider, manifest, url, html = false, opts = {}) {
 async function requestComponent(provider, manifest, url, opts = {}) {
     opts["source-manifest"] = Buffer.from(fs.readFileSync(manifest).toString()).toString('base64');
     let provided = await provider.provideComponent(manifest, opts); // throws error if content providing failed
+    if (provided.batch) {
+        return requestStackBatch(JSON.parse(provided.content), url, false, opts);
+    }
     opts["source-manifest"] = "";
     opts[TRUSTIFY_DA_OPERATION_TYPE_HEADER.toUpperCase().replaceAll("-", "_")] = "component-analysis";
     if (process.env["TRUSTIFY_DA_DEBUG"] === "true") {
@@ -95,9 +99,7 @@ async function requestComponent(provider, manifest, url, opts = {}) {
         body: provided.content
     }, opts);
     const finalUrl = new URL(`${url}/api/v5/analysis`);
-    if (opts['TRUSTIFY_DA_RECOMMENDATIONS_ENABLED'] === 'false') {
-        finalUrl.searchParams.append('recommend', 'false');
-    }
+    appendAnalysisQueryParams(finalUrl, opts);
     let resp = await fetch(finalUrl, fetchOptions);
     let result;
     if (resp.status === 200) {
@@ -136,9 +138,7 @@ async function requestComponent(provider, manifest, url, opts = {}) {
  */
 async function requestStackBatch(sbomByPurl, url, html = false, opts = {}) {
     const finalUrl = new URL(`${url}/api/v5/batch-analysis`);
-    if (opts['TRUSTIFY_DA_RECOMMENDATIONS_ENABLED'] === 'false') {
-        finalUrl.searchParams.append('recommend', 'false');
-    }
+    appendAnalysisQueryParams(finalUrl, opts);
     const fetchOptions = addProxyAgent({
         method: 'POST',
         headers: {
@@ -186,9 +186,7 @@ async function requestImages(imageRefs, url, html = false, opts = {}) {
         imageSboms[parsedImageRef.getPackageURL().toString()] = generateImageSBOM(parsedImageRef, opts);
     }
     const finalUrl = new URL(`${url}/api/v5/batch-analysis`);
-    if (opts['TRUSTIFY_DA_RECOMMENDATIONS_ENABLED'] === 'false') {
-        finalUrl.searchParams.append('recommend', 'false');
-    }
+    appendAnalysisQueryParams(finalUrl, opts);
     const fetchOptions = addProxyAgent({
         method: 'POST',
         headers: {
@@ -222,6 +220,24 @@ async function requestImages(imageRefs, url, html = false, opts = {}) {
         throw new Error(`Got error response from Trustify DA backend - http return code : ${resp.status}, ex-request-id: ${resp.headers.get("ex-request-id")}  error message =>  ${await resp.text()}`);
     }
 }
+/**
+ * Append common analysis query parameters (recommend, providers, sources) to a URL.
+ * @param {URL} url - the URL object to append query parameters to
+ * @param {import("index.js").Options} [opts={}] - options containing parameter overrides
+ */
+function appendAnalysisQueryParams(url, opts = {}) {
+    if (getCustom('TRUSTIFY_DA_RECOMMEND', 'true', opts) === 'false') {
+        url.searchParams.append('recommend', 'false');
+    }
+    const providers = getCustom('TRUSTIFY_DA_PROVIDERS', null, opts);
+    if (providers) {
+        url.searchParams.append('providers', providers);
+    }
+    const sources = getCustom('TRUSTIFY_DA_SOURCES', null, opts);
+    if (sources) {
+        url.searchParams.append('sources', sources);
+    }
+}
 /**
  *
  * @param url the backend url to send the request to

package/dist/src/cli.js

@@ -19,11 +19,25 @@ const component = {
             desc: 'Workspace root directory (for monorepos; lock file is expected here)',
             type: 'string',
             normalize: true,
+        },
+        providers: {
+            desc: 'Comma-separated list of vulnerability providers (env: TRUSTIFY_DA_PROVIDERS)',
+            type: 'string',
+        },
+        sources: {
+            desc: 'Comma-separated list of vulnerability sources (env: TRUSTIFY_DA_SOURCES)',
+            type: 'string',
         }
     }),
     handler: async (args) => {
         let manifestName = args['/path/to/manifest'];
         const opts = args.workspaceDir ? { TRUSTIFY_DA_WORKSPACE_DIR: args.workspaceDir } : {};
+        if (args.providers) {
+            opts.TRUSTIFY_DA_PROVIDERS = args.providers;
+        }
+        if (args.sources) {
+            opts.TRUSTIFY_DA_SOURCES = args.sources;
+        }
         let res = await client.componentAnalysis(manifestName, opts);
         console.log(JSON.stringify(res, null, 2));
     }
@@ -72,6 +86,14 @@ const image = {
             desc: 'For JSON report, get only the \'summary\'',
             type: 'boolean',
             conflicts: 'html'
+        },
+        providers: {
+            desc: 'Comma-separated list of vulnerability providers (env: TRUSTIFY_DA_PROVIDERS)',
+            type: 'string',
+        },
+        sources: {
+            desc: 'Comma-separated list of vulnerability sources (env: TRUSTIFY_DA_SOURCES)',
+            type: 'string',
         }
     }),
     handler: async (args) => {
@@ -81,7 +103,14 @@ const image = {
         }
         let html = args['html'];
         let summary = args['summary'];
-        let res = await client.imageAnalysis(imageRefs, html);
+        const opts = {};
+        if (args.providers) {
+            opts.TRUSTIFY_DA_PROVIDERS = args.providers;
+        }
+        if (args.sources) {
+            opts.TRUSTIFY_DA_SOURCES = args.sources;
+        }
+        let res = await client.imageAnalysis(imageRefs, html, opts);
         if (summary && !html) {
             let summaries = {};
             for (let [imageRef, report] of Object.entries(res)) {
@@ -132,6 +161,14 @@ const stack = {
             desc: 'Workspace root directory (for monorepos; lock file is expected here)',
             type: 'string',
             normalize: true,
+        },
+        providers: {
+            desc: 'Comma-separated list of vulnerability providers (env: TRUSTIFY_DA_PROVIDERS)',
+            type: 'string',
+        },
+        sources: {
+            desc: 'Comma-separated list of vulnerability sources (env: TRUSTIFY_DA_SOURCES)',
+            type: 'string',
         }
     }),
     handler: async (args) => {
@@ -139,6 +176,12 @@ const stack = {
         let html = args['html'];
         let summary = args['summary'];
         const opts = args.workspaceDir ? { TRUSTIFY_DA_WORKSPACE_DIR: args.workspaceDir } : {};
+        if (args.providers) {
+            opts.TRUSTIFY_DA_PROVIDERS = args.providers;
+        }
+        if (args.sources) {
+            opts.TRUSTIFY_DA_SOURCES = args.sources;
+        }
         let theProvidersSummary = new Map();
         let theProvidersObject = {};
         let res = await client.stackAnalysis(manifest, html, opts);
@@ -201,6 +244,14 @@ const stackBatch = {
             desc: 'Stop on first invalid package.json or SBOM error (env: TRUSTIFY_DA_CONTINUE_ON_ERROR=false)',
             type: 'boolean',
             default: false,
+        },
+        providers: {
+            desc: 'Comma-separated list of vulnerability providers (env: TRUSTIFY_DA_PROVIDERS)',
+            type: 'string',
+        },
+        sources: {
+            desc: 'Comma-separated list of vulnerability sources (env: TRUSTIFY_DA_SOURCES)',
+            type: 'string',
         }
     }),
     handler: async (args) => {
@@ -221,6 +272,12 @@ const stackBatch = {
         if (args.failFast) {
             opts.continueOnError = false;
         }
+        if (args.providers) {
+            opts.TRUSTIFY_DA_PROVIDERS = args.providers;
+        }
+        if (args.sources) {
+            opts.TRUSTIFY_DA_SOURCES = args.sources;
+        }
         let res = await client.stackAnalysisBatch(workspaceRoot, html, opts);
         const batchAnalysis = res && typeof res === 'object' && res != null && 'analysis' in res ? res.analysis : res;
         if (summary && !html && typeof batchAnalysis === 'object') {

package/dist/src/cyclone_dx_sbom.d.ts

@@ -18,9 +18,14 @@ export default class CycloneDxSbom {
      * Adds a dependency relationship between two components in the SBOM
      * @param {PackageURL} sourceRef - The source component (parent)
      * @param {PackageURL} targetRef - The target component (dependency)
+     * @param {string} [scope] - Scope of the dependency
+     * @param {Array<{alg: string, content: string}>} [targetHashes] - Optional hashes for the target component
      * @return {CycloneDxSbom} The updated SBOM
      */
-    addDependency(sourceRef: PackageURL, targetRef: PackageURL, scope: any): CycloneDxSbom;
+    addDependency(sourceRef: PackageURL, targetRef: PackageURL, scope?: string, targetHashes?: Array<{
+        alg: string;
+        content: string;
+    }>): CycloneDxSbom;
     /** @param {{}} opts - various options, settings and configuration of application.
      * @return String CycloneDx Sbom json object in a string format
      */
@@ -50,6 +55,7 @@ export default class CycloneDxSbom {
         version: any;
         scope: any;
         licenses?: any;
+        hashes?: any;
     };
     /**
      * This method gets an array of dependencies to be ignored, and remove all of them from CycloneDx Sbom

package/dist/src/cyclone_dx_sbom.js

@@ -6,10 +6,11 @@ import { PackageURL } from "packageurl-js";
  * @param type type of package - application or library
  * @param scope scope of the component - runtime or compile
  * @param licenses optional license string or array of licenses for the component
- * @return {{"bom-ref": string, name, purl: string, type, version, scope, licenses?}}
+ * @param hashes optional array of hash objects for the component, e.g. [{alg: "SHA-256", content: "..."}]
+ * @return {{"bom-ref": string, name, purl: string, type, version, scope, licenses?, hashes?}}
  * @private
  */
-function getComponent(component, type, scope, licenses) {
+function getComponent(component, type, scope, licenses, hashes) {
     let componentObject;
     if (component instanceof PackageURL) {
         if (component.namespace) {
@@ -40,12 +41,24 @@ function getComponent(component, type, scope, licenses) {
     // Add licenses if provided (CycloneDX format). Callers must provide valid SPDX identifiers.
     if (licenses) {
         const licenseArray = Array.isArray(licenses) ? licenses : [licenses];
-        componentObject.licenses = licenseArray.map(lic => {
+        const validLicenses = licenseArray
+            .map(lic => {
             if (typeof lic === 'string') {
                 return { license: { id: lic } };
             }
-            return lic;
-        });
+            if (typeof lic === 'object' && lic !== null && ('license' in lic || 'expression' in lic)) {
+                return lic;
+            }
+            return null;
+        })
+            .filter(Boolean);
+        if (validLicenses.length > 0) {
+            componentObject.licenses = validLicenses;
+        }
+    }
+    // Add hashes if provided (CycloneDX 1.4 format).
+    if (hashes && hashes.length > 0) {
+        componentObject.hashes = hashes;
     }
     return componentObject;
 }
@@ -86,16 +99,24 @@ export default class CycloneDxSbom {
      * Adds a dependency relationship between two components in the SBOM
      * @param {PackageURL} sourceRef - The source component (parent)
      * @param {PackageURL} targetRef - The target component (dependency)
+     * @param {string} [scope] - Scope of the dependency
+     * @param {Array<{alg: string, content: string}>} [targetHashes] - Optional hashes for the target component
      * @return {CycloneDxSbom} The updated SBOM
      */
-    addDependency(sourceRef, targetRef, scope) {
+    addDependency(sourceRef, targetRef, scope, targetHashes) {
         const sourcePurl = sourceRef.toString();
         const targetPurl = targetRef.toString();
         // Ensure both components exist in the components list
         [sourceRef, targetRef].forEach((ref, index) => {
             const purl = index === 0 ? sourcePurl : targetPurl;
-            if (this.getComponentIndex(purl) < 0) {
-                this.components.push(getComponent(ref, "library", scope));
+            const existingIndex = this.getComponentIndex(purl);
+            if (existingIndex < 0) {
+                const hashes = index === 1 ? targetHashes : undefined;
+                this.components.push(getComponent(ref, "library", scope, undefined, hashes));
+            }
+            else if (index === 1 && targetHashes && targetHashes.length > 0 && !this.components[existingIndex].hashes) {
+                // Update hashes if the component was first seen without them (e.g. as a source)
+                this.components[existingIndex].hashes = targetHashes;
             }
         });
         // Ensure source dependency exists

package/dist/src/index.d.ts

@@ -24,6 +24,7 @@ export function selectTrustifyDABackend(opts?: {
 export function generateSbom(manifestPath: string, opts?: Options): Promise<object>;
 export { parseImageRef } from "./oci_image/utils.js";
 export { ImageRef } from "./oci_image/images.js";
+export { extractRemediations } from "./remediation.js";
 declare namespace _default {
     export { componentAnalysis };
     export { stackAnalysis };
@@ -53,7 +54,9 @@ export type Options = {
     TRUSTIFY_DA_PYTHON_PATH?: string | undefined;
     TRUSTIFY_DA_PYTHON_VIRTUAL_ENV?: string | undefined;
     TRUSTIFY_DA_PYTHON3_PATH?: string | undefined;
-    TRUSTIFY_DA_RECOMMENDATIONS_ENABLED?: string | undefined;
+    TRUSTIFY_DA_PROVIDERS?: string | undefined;
+    TRUSTIFY_DA_RECOMMEND?: string | undefined;
+    TRUSTIFY_DA_SOURCES?: string | undefined;
     TRUSTIFY_DA_SKOPEO_CONFIG_PATH?: string | undefined;
     TRUSTIFY_DA_SKOPEO_PATH?: string | undefined;
     TRUSTIFY_DA_SYFT_CONFIG_PATH?: string | undefined;
@@ -80,7 +83,7 @@ export type Options = {
 };
 export type BatchAnalysisMetadata = {
     workspaceRoot: string;
-    ecosystem: "javascript" | "cargo" | "unknown";
+    ecosystem: "javascript" | "cargo" | "pyproject" | "unknown";
     total: number;
     successful: number;
     failed: number;
@@ -106,7 +109,7 @@ export type SbomResult = {
  * @returns {Promise<import('@trustify-da/trustify-da-api-model/model/v5/AnalysisReport').AnalysisReport>}
  * @throws {Error} if no matching provider, failed to get create content, or backend request failed
  */
-declare function componentAnalysis(manifest: string, opts?: Options): Promise<import("@trustify-da/trustify-da-api-model/model/v5/AnalysisReport").AnalysisReport>;
+declare function componentAnalysis(manifest: string, opts?: Options): Promise<any>;
 /**
  * @overload
  * @param {string} manifest
@@ -124,7 +127,7 @@ declare function stackAnalysis(manifest: string, html: true, opts?: Options | un
  * @returns {Promise<import('@trustify-da/trustify-da-api-model/model/v5/AnalysisReport').AnalysisReport>}
  * @throws {Error}
  */
-declare function stackAnalysis(manifest: string, html: false, opts?: Options | undefined): Promise<import("@trustify-da/trustify-da-api-model/model/v5/AnalysisReport").AnalysisReport>;
+declare function stackAnalysis(manifest: string, html: false, opts?: Options | undefined): Promise<any>;
 /**
  * Get stack analysis report for a manifest file.
  * @overload
@@ -135,24 +138,79 @@ declare function stackAnalysis(manifest: string, html: false, opts?: Options | u
  * @throws {Error} if manifest inaccessible, no matching provider, failed to get create content,
  * 		or backend request failed
  */
-declare function stackAnalysis(manifest: string, html?: boolean | undefined, opts?: Options | undefined): Promise<string | import("@trustify-da/trustify-da-api-model/model/v5/AnalysisReport").AnalysisReport>;
+declare function stackAnalysis(manifest: string, html?: boolean | undefined, opts?: Options | undefined): Promise<string | any>;
+/**
+ * @overload
+ * @param {string} workspaceRoot
+ * @param {true} html
+ * @param {Options & { batchMetadata: true }} opts
+ * @returns {Promise<{ analysis: string, metadata: BatchAnalysisMetadata }>}
+ * @throws {Error}
+ */
+declare function stackAnalysisBatch(workspaceRoot: string, html: true, opts: Options & {
+    batchMetadata: true;
+}): Promise<{
+    analysis: string;
+    metadata: BatchAnalysisMetadata;
+}>;
+/**
+ * @overload
+ * @param {string} workspaceRoot
+ * @param {true} html
+ * @param {Options & { batchMetadata?: false }} [opts={}]
+ * @returns {Promise<string>}
+ * @throws {Error}
+ */
+declare function stackAnalysisBatch(workspaceRoot: string, html: true, opts?: (Options & {
+    batchMetadata?: false;
+}) | undefined): Promise<string>;
+/**
+ * @overload
+ * @param {string} workspaceRoot
+ * @param {false} html
+ * @param {Options & { batchMetadata: true }} opts
+ * @returns {Promise<{ analysis: Object.<string, import('@trustify-da/trustify-da-api-model/model/v5/AnalysisReport').AnalysisReport>, metadata: BatchAnalysisMetadata }>}
+ * @throws {Error}
+ */
+declare function stackAnalysisBatch(workspaceRoot: string, html: false, opts: Options & {
+    batchMetadata: true;
+}): Promise<{
+    analysis: {
+        [x: string]: any;
+    };
+    metadata: BatchAnalysisMetadata;
+}>;
+/**
+ * @overload
+ * @param {string} workspaceRoot
+ * @param {false} html
+ * @param {Options & { batchMetadata?: false }} [opts={}]
+ * @returns {Promise<Object.<string, import('@trustify-da/trustify-da-api-model/model/v5/AnalysisReport').AnalysisReport>>}
+ * @throws {Error}
+ */
+declare function stackAnalysisBatch(workspaceRoot: string, html: false, opts?: (Options & {
+    batchMetadata?: false;
+}) | undefined): Promise<{
+    [x: string]: any;
+}>;
 /**
  * Get stack analysis for all workspace packages/crates (batch).
  * Detects ecosystem from workspace root: Cargo (Cargo.toml + Cargo.lock) or JS/TS (package.json + lock file).
  * SBOMs are generated in parallel (see `batchConcurrency`) unless `continueOnError: false` (fail-fast sequential).
  * With `opts.batchMetadata` / `TRUSTIFY_DA_BATCH_METADATA`, returns `{ analysis, metadata }` including validation and SBOM errors.
  *
+ * @overload
  * @param {string} workspaceRoot - Path to workspace root (containing lock file and workspace config)
  * @param {boolean} [html=false] - true returns HTML, false returns JSON report
  * @param {Options} [opts={}] - `batchConcurrency`, discovery ignores, `continueOnError` (default true), `batchMetadata` (default false)
  * @returns {Promise<string|Object.<string, import('@trustify-da/trustify-da-api-model/model/v5/AnalysisReport').AnalysisReport>|{ analysis: string|Object.<string, import('@trustify-da/trustify-da-api-model/model/v5/AnalysisReport').AnalysisReport>, metadata: BatchAnalysisMetadata }>}
  * @throws {Error} if workspace root invalid, no manifests found, no packages pass validation, no SBOMs produced, or backend request failed. When `opts.batchMetadata` is set, `error.batchMetadata` may be set on thrown errors.
  */
-declare function stackAnalysisBatch(workspaceRoot: string, html?: boolean, opts?: Options): Promise<string | {
-    [x: string]: import("@trustify-da/trustify-da-api-model/model/v5/AnalysisReport").AnalysisReport;
+declare function stackAnalysisBatch(workspaceRoot: string, html?: boolean | undefined, opts?: Options | undefined): Promise<string | {
+    [x: string]: any;
 } | {
     analysis: string | {
-        [x: string]: import("@trustify-da/trustify-da-api-model/model/v5/AnalysisReport").AnalysisReport;
+        [x: string]: any;
     };
     metadata: BatchAnalysisMetadata;
 }>;
@@ -174,7 +232,7 @@ declare function imageAnalysis(imageRefs: Array<string>, html: true, opts?: Opti
  * @throws {Error}
  */
 declare function imageAnalysis(imageRefs: Array<string>, html: false, opts?: Options | undefined): Promise<{
-    [x: string]: import("@trustify-da/trustify-da-api-model/model/v5/AnalysisReport").AnalysisReport;
+    [x: string]: any;
 }>;
 /**
  * Get image analysis report for a set of OCI image references.
@@ -187,7 +245,7 @@ declare function imageAnalysis(imageRefs: Array<string>, html: false, opts?: Opt
  * 		or backend request failed
  */
 declare function imageAnalysis(imageRefs: Array<string>, html?: boolean | undefined, opts?: Options | undefined): Promise<string | {
-    [x: string]: import("@trustify-da/trustify-da-api-model/model/v5/AnalysisReport").AnalysisReport;
+    [x: string]: any;
 }>;
 /**
  * Validates the Exhort token.
@@ -196,6 +254,10 @@ declare function imageAnalysis(imageRefs: Array<string>, html?: boolean | undefi
  * @throws {Error} if the backend request failed.
  */
 declare function validateToken(opts?: Options): Promise<object>;
+import { discoverMavenModules } from './providers/java_maven.js';
+import { discoverGradleSubprojects } from './providers/java_gradle.js';
+import { discoverGoWorkspaceModules } from './providers/golang_gomodules.js';
+import { discoverUvWorkspaceMembers } from './providers/python_uv.js';
 import { discoverWorkspacePackages } from './workspace.js';
 import { discoverWorkspaceCrates } from './workspace.js';
 import { validatePackageJson } from './workspace.js';
@@ -203,5 +265,6 @@ import { resolveWorkspaceDiscoveryIgnore } from './workspace.js';
 import { filterManifestPathsByDiscoveryIgnore } from './workspace.js';
 import { resolveContinueOnError } from './batch_opts.js';
 import { resolveBatchMetadata } from './batch_opts.js';
-export { discoverWorkspacePackages, discoverWorkspaceCrates, validatePackageJson, resolveWorkspaceDiscoveryIgnore, filterManifestPathsByDiscoveryIgnore, resolveContinueOnError, resolveBatchMetadata };
+export { discoverMavenModules, discoverGradleSubprojects, discoverGoWorkspaceModules, discoverUvWorkspaceMembers, discoverWorkspacePackages, discoverWorkspaceCrates, validatePackageJson, resolveWorkspaceDiscoveryIgnore, filterManifestPathsByDiscoveryIgnore, resolveContinueOnError, resolveBatchMetadata };
 export { getProjectLicense, findLicenseFilePath, identifyLicense, getLicenseDetails, licensesFromReport, normalizeLicensesResponse, runLicenseCheck, getCompatibility } from "./license/index.js";
+export { generateReport, generateDeduplicationKey } from "./remediation_report.js";