@timmeck/brain 1.0.0 → 1.1.0

package/src/db/migrations/005_fts_indexes.ts

@@ -1,78 +1,78 @@
-import type Database from 'better-sqlite3';
-
-export function up(db: Database.Database): void {
-  db.exec(`
-    -- Full-text search for errors
-    CREATE VIRTUAL TABLE IF NOT EXISTS errors_fts USING fts5(
-      type, message, raw_output, context, file_path,
-      content='errors',
-      content_rowid='id'
-    );
-
-    -- Sync triggers for errors_fts
-    CREATE TRIGGER IF NOT EXISTS errors_ai AFTER INSERT ON errors BEGIN
-      INSERT INTO errors_fts(rowid, type, message, raw_output, context, file_path)
-      VALUES (new.id, new.type, new.message, new.raw_output, new.context, new.file_path);
-    END;
-
-    CREATE TRIGGER IF NOT EXISTS errors_ad AFTER DELETE ON errors BEGIN
-      INSERT INTO errors_fts(errors_fts, rowid, type, message, raw_output, context, file_path)
-      VALUES ('delete', old.id, old.type, old.message, old.raw_output, old.context, old.file_path);
-    END;
-
-    CREATE TRIGGER IF NOT EXISTS errors_au AFTER UPDATE ON errors BEGIN
-      INSERT INTO errors_fts(errors_fts, rowid, type, message, raw_output, context, file_path)
-      VALUES ('delete', old.id, old.type, old.message, old.raw_output, old.context, old.file_path);
-      INSERT INTO errors_fts(rowid, type, message, raw_output, context, file_path)
-      VALUES (new.id, new.type, new.message, new.raw_output, new.context, new.file_path);
-    END;
-
-    -- Full-text search for solutions
-    CREATE VIRTUAL TABLE IF NOT EXISTS solutions_fts USING fts5(
-      description, commands, code_change,
-      content='solutions',
-      content_rowid='id'
-    );
-
-    CREATE TRIGGER IF NOT EXISTS solutions_ai AFTER INSERT ON solutions BEGIN
-      INSERT INTO solutions_fts(rowid, description, commands, code_change)
-      VALUES (new.id, new.description, new.commands, new.code_change);
-    END;
-
-    CREATE TRIGGER IF NOT EXISTS solutions_ad AFTER DELETE ON solutions BEGIN
-      INSERT INTO solutions_fts(solutions_fts, rowid, description, commands, code_change)
-      VALUES ('delete', old.id, old.description, old.commands, old.code_change);
-    END;
-
-    CREATE TRIGGER IF NOT EXISTS solutions_au AFTER UPDATE ON solutions BEGIN
-      INSERT INTO solutions_fts(solutions_fts, rowid, description, commands, code_change)
-      VALUES ('delete', old.id, old.description, old.commands, old.code_change);
-      INSERT INTO solutions_fts(rowid, description, commands, code_change)
-      VALUES (new.id, new.description, new.commands, new.code_change);
-    END;
-
-    -- Full-text search for code modules
-    CREATE VIRTUAL TABLE IF NOT EXISTS code_modules_fts USING fts5(
-      name, file_path, description, language,
-      content='code_modules',
-      content_rowid='id'
-    );
-
-    CREATE TRIGGER IF NOT EXISTS code_modules_ai AFTER INSERT ON code_modules BEGIN
-      INSERT INTO code_modules_fts(rowid, name, file_path, description, language)
-      VALUES (new.id, new.name, new.file_path, new.description, new.language);
-    END;
-
-    CREATE TRIGGER IF NOT EXISTS code_modules_ad AFTER DELETE ON code_modules BEGIN
-      INSERT INTO code_modules_fts(code_modules_fts, rowid, name, file_path, description, language)
-      VALUES ('delete', old.id, old.name, old.file_path, old.description, old.language);
-    END;
-
-    CREATE TRIGGER IF NOT EXISTS code_modules_au AFTER UPDATE ON code_modules BEGIN
-      INSERT INTO code_modules_fts(code_modules_fts, rowid, name, file_path, description, language)
-      VALUES ('delete', old.id, old.name, old.file_path, old.description, old.language);
-      INSERT INTO code_modules_fts(rowid, name, file_path, description, language)
-      VALUES (new.id, new.name, new.file_path, new.description, new.language);
-    END;
-  `);
-}
+import type Database from 'better-sqlite3';
+
+export function up(db: Database.Database): void {
+  db.exec(`
+    -- Full-text search for errors
+    CREATE VIRTUAL TABLE IF NOT EXISTS errors_fts USING fts5(
+      type, message, raw_output, context, file_path,
+      content='errors',
+      content_rowid='id'
+    );
+
+    -- Sync triggers for errors_fts
+    CREATE TRIGGER IF NOT EXISTS errors_ai AFTER INSERT ON errors BEGIN
+      INSERT INTO errors_fts(rowid, type, message, raw_output, context, file_path)
+      VALUES (new.id, new.type, new.message, new.raw_output, new.context, new.file_path);
+    END;
+
+    CREATE TRIGGER IF NOT EXISTS errors_ad AFTER DELETE ON errors BEGIN
+      INSERT INTO errors_fts(errors_fts, rowid, type, message, raw_output, context, file_path)
+      VALUES ('delete', old.id, old.type, old.message, old.raw_output, old.context, old.file_path);
+    END;
+
+    CREATE TRIGGER IF NOT EXISTS errors_au AFTER UPDATE ON errors BEGIN
+      INSERT INTO errors_fts(errors_fts, rowid, type, message, raw_output, context, file_path)
+      VALUES ('delete', old.id, old.type, old.message, old.raw_output, old.context, old.file_path);
+      INSERT INTO errors_fts(rowid, type, message, raw_output, context, file_path)
+      VALUES (new.id, new.type, new.message, new.raw_output, new.context, new.file_path);
+    END;
+
+    -- Full-text search for solutions
+    CREATE VIRTUAL TABLE IF NOT EXISTS solutions_fts USING fts5(
+      description, commands, code_change,
+      content='solutions',
+      content_rowid='id'
+    );
+
+    CREATE TRIGGER IF NOT EXISTS solutions_ai AFTER INSERT ON solutions BEGIN
+      INSERT INTO solutions_fts(rowid, description, commands, code_change)
+      VALUES (new.id, new.description, new.commands, new.code_change);
+    END;
+
+    CREATE TRIGGER IF NOT EXISTS solutions_ad AFTER DELETE ON solutions BEGIN
+      INSERT INTO solutions_fts(solutions_fts, rowid, description, commands, code_change)
+      VALUES ('delete', old.id, old.description, old.commands, old.code_change);
+    END;
+
+    CREATE TRIGGER IF NOT EXISTS solutions_au AFTER UPDATE ON solutions BEGIN
+      INSERT INTO solutions_fts(solutions_fts, rowid, description, commands, code_change)
+      VALUES ('delete', old.id, old.description, old.commands, old.code_change);
+      INSERT INTO solutions_fts(rowid, description, commands, code_change)
+      VALUES (new.id, new.description, new.commands, new.code_change);
+    END;
+
+    -- Full-text search for code modules
+    CREATE VIRTUAL TABLE IF NOT EXISTS code_modules_fts USING fts5(
+      name, file_path, description, language,
+      content='code_modules',
+      content_rowid='id'
+    );
+
+    CREATE TRIGGER IF NOT EXISTS code_modules_ai AFTER INSERT ON code_modules BEGIN
+      INSERT INTO code_modules_fts(rowid, name, file_path, description, language)
+      VALUES (new.id, new.name, new.file_path, new.description, new.language);
+    END;
+
+    CREATE TRIGGER IF NOT EXISTS code_modules_ad AFTER DELETE ON code_modules BEGIN
+      INSERT INTO code_modules_fts(code_modules_fts, rowid, name, file_path, description, language)
+      VALUES ('delete', old.id, old.name, old.file_path, old.description, old.language);
+    END;
+
+    CREATE TRIGGER IF NOT EXISTS code_modules_au AFTER UPDATE ON code_modules BEGIN
+      INSERT INTO code_modules_fts(code_modules_fts, rowid, name, file_path, description, language)
+      VALUES ('delete', old.id, old.name, old.file_path, old.description, old.language);
+      INSERT INTO code_modules_fts(rowid, name, file_path, description, language)
+      VALUES (new.id, new.name, new.file_path, new.description, new.language);
+    END;
+  `);
+}

package/src/db/migrations/006_synapses_phase3.ts

@@ -1,17 +1,17 @@
-import type Database from 'better-sqlite3';
-
-export function up(db: Database.Database): void {
-  // Add activation_count and last_activated_at columns
-  const columns = db.pragma('table_info(synapses)') as Array<{ name: string }>;
-  const colNames = columns.map(c => c.name);
-
-  if (!colNames.includes('activation_count')) {
-    db.exec(`ALTER TABLE synapses ADD COLUMN activation_count INTEGER NOT NULL DEFAULT 1`);
-  }
-  if (!colNames.includes('last_activated_at')) {
-    db.exec(`ALTER TABLE synapses ADD COLUMN last_activated_at TEXT NOT NULL DEFAULT (datetime('now'))`);
-  }
-
-  // Add index for decay queries
-  db.exec(`CREATE INDEX IF NOT EXISTS idx_synapses_last_activated ON synapses(last_activated_at)`);
-}
+import type Database from 'better-sqlite3';
+
+export function up(db: Database.Database): void {
+  // Add activation_count and last_activated_at columns
+  const columns = db.pragma('table_info(synapses)') as Array<{ name: string }>;
+  const colNames = columns.map(c => c.name);
+
+  if (!colNames.includes('activation_count')) {
+    db.exec(`ALTER TABLE synapses ADD COLUMN activation_count INTEGER NOT NULL DEFAULT 1`);
+  }
+  if (!colNames.includes('last_activated_at')) {
+    db.exec(`ALTER TABLE synapses ADD COLUMN last_activated_at TEXT NOT NULL DEFAULT (datetime('now'))`);
+  }
+
+  // Add index for decay queries
+  db.exec(`CREATE INDEX IF NOT EXISTS idx_synapses_last_activated ON synapses(last_activated_at)`);
+}

package/src/db/migrations/index.ts

@@ -1,64 +1,64 @@
-import type Database from 'better-sqlite3';
-import { getLogger } from '../../utils/logger.js';
-import { up as coreSchema } from './001_core_schema.js';
-import { up as learningSchema } from './002_learning_schema.js';
-import { up as codeSchema } from './003_code_schema.js';
-import { up as synapsesSchema } from './004_synapses_schema.js';
-import { up as ftsIndexes } from './005_fts_indexes.js';
-import { up as synapsesPhase3 } from './006_synapses_phase3.js';
-
-interface Migration {
-  version: number;
-  name: string;
-  up: (db: Database.Database) => void;
-}
-
-const migrations: Migration[] = [
-  { version: 1, name: '001_core_schema', up: coreSchema },
-  { version: 2, name: '002_learning_schema', up: learningSchema },
-  { version: 3, name: '003_code_schema', up: codeSchema },
-  { version: 4, name: '004_synapses_schema', up: synapsesSchema },
-  { version: 5, name: '005_fts_indexes', up: ftsIndexes },
-  { version: 6, name: '006_synapses_phase3', up: synapsesPhase3 },
-];
-
-function ensureMigrationsTable(db: Database.Database): void {
-  db.exec(`
-    CREATE TABLE IF NOT EXISTS migrations (
-      version INTEGER PRIMARY KEY,
-      name TEXT NOT NULL,
-      applied_at TEXT NOT NULL DEFAULT (datetime('now'))
-    );
-  `);
-}
-
-function getCurrentVersion(db: Database.Database): number {
-  const row = db.prepare('SELECT MAX(version) as version FROM migrations').get() as { version: number | null } | undefined;
-  return row?.version ?? 0;
-}
-
-export function runMigrations(db: Database.Database): void {
-  const logger = getLogger();
-  ensureMigrationsTable(db);
-
-  const currentVersion = getCurrentVersion(db);
-  const pending = migrations.filter(m => m.version > currentVersion);
-
-  if (pending.length === 0) {
-    logger.info('Database is up to date');
-    return;
-  }
-
-  logger.info(`Running ${pending.length} migration(s) from version ${currentVersion}`);
-
-  const runAll = db.transaction(() => {
-    for (const migration of pending) {
-      logger.info(`Applying migration ${migration.name}`);
-      migration.up(db);
-      db.prepare('INSERT INTO migrations (version, name) VALUES (?, ?)').run(migration.version, migration.name);
-    }
-  });
-
-  runAll();
-  logger.info(`Migrations complete. Now at version ${pending[pending.length - 1]!.version}`);
-}
+import type Database from 'better-sqlite3';
+import { getLogger } from '../../utils/logger.js';
+import { up as coreSchema } from './001_core_schema.js';
+import { up as learningSchema } from './002_learning_schema.js';
+import { up as codeSchema } from './003_code_schema.js';
+import { up as synapsesSchema } from './004_synapses_schema.js';
+import { up as ftsIndexes } from './005_fts_indexes.js';
+import { up as synapsesPhase3 } from './006_synapses_phase3.js';
+
+interface Migration {
+  version: number;
+  name: string;
+  up: (db: Database.Database) => void;
+}
+
+const migrations: Migration[] = [
+  { version: 1, name: '001_core_schema', up: coreSchema },
+  { version: 2, name: '002_learning_schema', up: learningSchema },
+  { version: 3, name: '003_code_schema', up: codeSchema },
+  { version: 4, name: '004_synapses_schema', up: synapsesSchema },
+  { version: 5, name: '005_fts_indexes', up: ftsIndexes },
+  { version: 6, name: '006_synapses_phase3', up: synapsesPhase3 },
+];
+
+function ensureMigrationsTable(db: Database.Database): void {
+  db.exec(`
+    CREATE TABLE IF NOT EXISTS migrations (
+      version INTEGER PRIMARY KEY,
+      name TEXT NOT NULL,
+      applied_at TEXT NOT NULL DEFAULT (datetime('now'))
+    );
+  `);
+}
+
+function getCurrentVersion(db: Database.Database): number {
+  const row = db.prepare('SELECT MAX(version) as version FROM migrations').get() as { version: number | null } | undefined;
+  return row?.version ?? 0;
+}
+
+export function runMigrations(db: Database.Database): void {
+  const logger = getLogger();
+  ensureMigrationsTable(db);
+
+  const currentVersion = getCurrentVersion(db);
+  const pending = migrations.filter(m => m.version > currentVersion);
+
+  if (pending.length === 0) {
+    logger.info('Database is up to date');
+    return;
+  }
+
+  logger.info(`Running ${pending.length} migration(s) from version ${currentVersion}`);
+
+  const runAll = db.transaction(() => {
+    for (const migration of pending) {
+      logger.info(`Applying migration ${migration.name}`);
+      migration.up(db);
+      db.prepare('INSERT INTO migrations (version, name) VALUES (?, ?)').run(migration.version, migration.name);
+    }
+  });
+
+  runAll();
+  logger.info(`Migrations complete. Now at version ${pending[pending.length - 1]!.version}`);
+}

package/src/db/repositories/antipattern.repository.ts

@@ -1,66 +1,66 @@
-import type Database from 'better-sqlite3';
-import type { Statement } from 'better-sqlite3';
-
-export interface AntipatternRecord {
-  id: number;
-  pattern: string;
-  description: string;
-  severity: string;
-  suggestion: string | null;
-  occurrences: number;
-  project_id: number | null;
-  global: number;
-  created_at: string;
-}
-
-type AntipatternCreate = Omit<AntipatternRecord, 'id' | 'created_at'>;
-type AntipatternUpdate = Partial<Omit<AntipatternRecord, 'id' | 'created_at'>>;
-
-export class AntipatternRepository {
-  private stmts: Record<string, Statement>;
-
-  constructor(private db: Database.Database) {
-    this.stmts = {
-      create: db.prepare(`
-        INSERT INTO antipatterns (pattern, description, severity, suggestion, occurrences, project_id, global)
-        VALUES (@pattern, @description, @severity, @suggestion, @occurrences, @project_id, @global)
-      `),
-      getById: db.prepare('SELECT * FROM antipatterns WHERE id = ?'),
-      delete: db.prepare('DELETE FROM antipatterns WHERE id = ?'),
-      findByProject: db.prepare('SELECT * FROM antipatterns WHERE project_id = ? ORDER BY occurrences DESC'),
-      findGlobal: db.prepare('SELECT * FROM antipatterns WHERE global = 1 ORDER BY occurrences DESC'),
-    };
-  }
-
-  create(data: AntipatternCreate): number {
-    const result = this.stmts.create.run(data);
-    return result.lastInsertRowid as number;
-  }
-
-  getById(id: number): AntipatternRecord | undefined {
-    return this.stmts.getById.get(id) as AntipatternRecord | undefined;
-  }
-
-  update(id: number, data: AntipatternUpdate): boolean {
-    const fields = Object.keys(data).filter((key) => (data as Record<string, unknown>)[key] !== undefined);
-    if (fields.length === 0) return false;
-
-    const setClauses = fields.map((field) => `${field} = @${field}`).join(', ');
-    const stmt = this.db.prepare(`UPDATE antipatterns SET ${setClauses} WHERE id = @id`);
-    const result = stmt.run({ ...data, id });
-    return result.changes > 0;
-  }
-
-  delete(id: number): boolean {
-    const result = this.stmts.delete.run(id);
-    return result.changes > 0;
-  }
-
-  findByProject(projectId: number): AntipatternRecord[] {
-    return this.stmts.findByProject.all(projectId) as AntipatternRecord[];
-  }
-
-  findGlobal(): AntipatternRecord[] {
-    return this.stmts.findGlobal.all() as AntipatternRecord[];
-  }
-}
+import type Database from 'better-sqlite3';
+import type { Statement } from 'better-sqlite3';
+
+export interface AntipatternRecord {
+  id: number;
+  pattern: string;
+  description: string;
+  severity: string;
+  suggestion: string | null;
+  occurrences: number;
+  project_id: number | null;
+  global: number;
+  created_at: string;
+}
+
+type AntipatternCreate = Omit<AntipatternRecord, 'id' | 'created_at'>;
+type AntipatternUpdate = Partial<Omit<AntipatternRecord, 'id' | 'created_at'>>;
+
+export class AntipatternRepository {
+  private stmts: Record<string, Statement>;
+
+  constructor(private db: Database.Database) {
+    this.stmts = {
+      create: db.prepare(`
+        INSERT INTO antipatterns (pattern, description, severity, suggestion, occurrences, project_id, global)
+        VALUES (@pattern, @description, @severity, @suggestion, @occurrences, @project_id, @global)
+      `),
+      getById: db.prepare('SELECT * FROM antipatterns WHERE id = ?'),
+      delete: db.prepare('DELETE FROM antipatterns WHERE id = ?'),
+      findByProject: db.prepare('SELECT * FROM antipatterns WHERE project_id = ? ORDER BY occurrences DESC'),
+      findGlobal: db.prepare('SELECT * FROM antipatterns WHERE global = 1 ORDER BY occurrences DESC'),
+    };
+  }
+
+  create(data: AntipatternCreate): number {
+    const result = this.stmts.create.run(data);
+    return result.lastInsertRowid as number;
+  }
+
+  getById(id: number): AntipatternRecord | undefined {
+    return this.stmts.getById.get(id) as AntipatternRecord | undefined;
+  }
+
+  update(id: number, data: AntipatternUpdate): boolean {
+    const fields = Object.keys(data).filter((key) => (data as Record<string, unknown>)[key] !== undefined);
+    if (fields.length === 0) return false;
+
+    const setClauses = fields.map((field) => `${field} = @${field}`).join(', ');
+    const stmt = this.db.prepare(`UPDATE antipatterns SET ${setClauses} WHERE id = @id`);
+    const result = stmt.run({ ...data, id });
+    return result.changes > 0;
+  }
+
+  delete(id: number): boolean {
+    const result = this.stmts.delete.run(id);
+    return result.changes > 0;
+  }
+
+  findByProject(projectId: number): AntipatternRecord[] {
+    return this.stmts.findByProject.all(projectId) as AntipatternRecord[];
+  }
+
+  findGlobal(): AntipatternRecord[] {
+    return this.stmts.findGlobal.all() as AntipatternRecord[];
+  }
+}

package/src/db/repositories/code-module.repository.ts

@@ -18,6 +18,7 @@ export class CodeModuleRepository {
       delete: db.prepare('DELETE FROM code_modules WHERE id = ?'),
       findByFingerprint: db.prepare('SELECT * FROM code_modules WHERE fingerprint = ?'),
       findByProject: db.prepare('SELECT * FROM code_modules WHERE project_id = ? ORDER BY name ASC'),
+      findAll: db.prepare('SELECT * FROM code_modules ORDER BY name ASC'),
       countAll: db.prepare('SELECT COUNT(*) as count FROM code_modules'),
       search: db.prepare(`
         SELECT cm.* FROM code_modules cm
@@ -74,6 +75,14 @@ export class CodeModuleRepository {
     return this.stmts.search.all(query) as CodeModuleRecord[];
   }
 
+  findAll(limit?: number): CodeModuleRecord[] {
+    if (limit) {
+      const stmt = this.db.prepare('SELECT * FROM code_modules ORDER BY name ASC LIMIT ?');
+      return stmt.all(limit) as CodeModuleRecord[];
+    }
+    return this.stmts.findAll.all() as CodeModuleRecord[];
+  }
+
   countAll(): number {
     return (this.stmts.countAll.get() as { count: number }).count;
   }