@timmeck/brain-core 2.31.2 → 2.33.0

package/dist/research/bootstrap-service.d.ts

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+import type Database from 'better-sqlite3';
+import type { SelfObserver } from './self-observer.js';
+import type { AnomalyDetective } from './anomaly-detective.js';
+import type { ResearchJournal } from './journal.js';
+import type { HypothesisEngine } from '../hypothesis/engine.js';
+import type { PredictionEngine } from '../prediction/prediction-engine.js';
+import type { ParameterRegistry } from '../metacognition/parameter-registry.js';
+export interface BootstrapConfig {
+    brainName: string;
+    engineCount: number;
+    mcpToolCount: number;
+    version: string;
+}
+export interface BootstrapEngines {
+    selfObserver?: SelfObserver;
+    anomalyDetective?: AnomalyDetective;
+    journal?: ResearchJournal;
+    hypothesisEngine?: HypothesisEngine;
+    predictionEngine?: PredictionEngine;
+    parameterRegistry?: ParameterRegistry;
+}
+export interface BootstrapState {
+    bootstrapped: boolean;
+    bootstrapped_at: number | null;
+    observations_seeded: number;
+    journal_entries_seeded: number;
+    hypotheses_seeded: number;
+    predictions_seeded: number;
+    updated_at: string;
+}
+export interface BootstrapResult {
+    alreadyBootstrapped: boolean;
+    observations: number;
+    journalEntries: number;
+    hypotheses: number;
+    predictions: number;
+    metrics: number;
+}
+export declare function runBootstrapMigration(db: Database.Database): void;
+export declare class BootstrapService {
+    private db;
+    private config;
+    private engines;
+    private log;
+    constructor(db: Database.Database, config: BootstrapConfig);
+    /** Wire engines after construction — missing engines are gracefully skipped. */
+    setEngines(engines: BootstrapEngines): void;
+    /** Run the 5-phase bootstrap. Idempotent — only runs once. */
+    bootstrap(): BootstrapResult;
+    /** Get current bootstrap state. */
+    getState(): BootstrapState;
+    private seedObservations;
+    private seedJournal;
+    private seedHypotheses;
+    private seedPredictions;
+    private seedMetrics;
+}

package/dist/research/bootstrap-service.js

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+import { getLogger } from '../utils/logger.js';
+// ── Known research tables ───────────────────────────────
+const RESEARCH_TABLES = [
+    'self_observations', 'self_insights', 'research_journal', 'hypotheses', 'observations',
+    'anomalies', 'metric_history', 'experiments', 'knowledge_base', 'research_agenda',
+    'cross_domain_events', 'cross_domain_correlations', 'causal_events', 'causal_edges',
+    'predictions', 'prediction_metrics', 'dream_history',
+];
+// ── Migration ───────────────────────────────────────────
+export function runBootstrapMigration(db) {
+    db.exec(`
+    CREATE TABLE IF NOT EXISTS bootstrap_state (
+      id INTEGER PRIMARY KEY CHECK (id = 1),
+      bootstrapped INTEGER NOT NULL DEFAULT 0,
+      bootstrapped_at INTEGER,
+      observations_seeded INTEGER NOT NULL DEFAULT 0,
+      journal_entries_seeded INTEGER NOT NULL DEFAULT 0,
+      hypotheses_seeded INTEGER NOT NULL DEFAULT 0,
+      predictions_seeded INTEGER NOT NULL DEFAULT 0,
+      updated_at TEXT DEFAULT (datetime('now'))
+    );
+    INSERT OR IGNORE INTO bootstrap_state (id) VALUES (1);
+  `);
+}
+// ── BootstrapService ────────────────────────────────────
+export class BootstrapService {
+    db;
+    config;
+    engines = {};
+    log = getLogger();
+    constructor(db, config) {
+        this.db = db;
+        this.config = config;
+        runBootstrapMigration(db);
+    }
+    /** Wire engines after construction — missing engines are gracefully skipped. */
+    setEngines(engines) {
+        this.engines = engines;
+    }
+    /** Run the 5-phase bootstrap. Idempotent — only runs once. */
+    bootstrap() {
+        const state = this.getState();
+        if (state.bootstrapped) {
+            this.log.info(`[bootstrap] Already bootstrapped at ${state.bootstrapped_at}`);
+            return { alreadyBootstrapped: true, observations: 0, journalEntries: 0, hypotheses: 0, predictions: 0, metrics: 0 };
+        }
+        this.log.info(`[bootstrap] Starting cold-start bootstrap for ${this.config.brainName}...`);
+        const start = Date.now();
+        const observations = this.seedObservations();
+        const journalEntries = this.seedJournal();
+        const hypotheses = this.seedHypotheses();
+        const predictions = this.seedPredictions();
+        const metrics = this.seedMetrics();
+        // Mark as bootstrapped
+        this.db.prepare(`
+      UPDATE bootstrap_state SET
+        bootstrapped = 1,
+        bootstrapped_at = ?,
+        observations_seeded = ?,
+        journal_entries_seeded = ?,
+        hypotheses_seeded = ?,
+        predictions_seeded = ?,
+        updated_at = datetime('now')
+      WHERE id = 1
+    `).run(Date.now(), observations, journalEntries, hypotheses, predictions);
+        const duration = Date.now() - start;
+        this.log.info(`[bootstrap] Complete in ${duration}ms: ${observations} observations, ${journalEntries} journal, ` +
+            `${hypotheses} hypotheses, ${predictions} predictions, ${metrics} metrics seeded`);
+        return { alreadyBootstrapped: false, observations, journalEntries, hypotheses, predictions, metrics };
+    }
+    /** Get current bootstrap state. */
+    getState() {
+        const row = this.db.prepare('SELECT * FROM bootstrap_state WHERE id = 1').get();
+        if (!row) {
+            return { bootstrapped: false, bootstrapped_at: null, observations_seeded: 0, journal_entries_seeded: 0, hypotheses_seeded: 0, predictions_seeded: 0, updated_at: '' };
+        }
+        return {
+            bootstrapped: row.bootstrapped === 1,
+            bootstrapped_at: row.bootstrapped_at,
+            observations_seeded: row.observations_seeded,
+            journal_entries_seeded: row.journal_entries_seeded,
+            hypotheses_seeded: row.hypotheses_seeded,
+            predictions_seeded: row.predictions_seeded,
+            updated_at: row.updated_at,
+        };
+    }
+    // ── Phase 1: Seed Observations ────────────────────────
+    seedObservations() {
+        if (!this.engines.selfObserver)
+            return 0;
+        let count = 0;
+        // 1a. DB table sizes — count rows in known research tables
+        for (const table of RESEARCH_TABLES) {
+            try {
+                const row = this.db.prepare(`SELECT COUNT(*) as cnt FROM ${table}`).get();
+                this.engines.selfObserver.record({
+                    category: 'tool_usage',
+                    event_type: `table_size:${table}`,
+                    metrics: { row_count: row.cnt, table },
+                });
+                count++;
+            }
+            catch {
+                // Table doesn't exist yet — skip
+            }
+        }
+        // 1b. Parameter landscape — read up to 15 parameters
+        if (this.engines.parameterRegistry) {
+            try {
+                const params = this.engines.parameterRegistry.list();
+                const toSeed = params.slice(0, 15);
+                for (const p of toSeed) {
+                    this.engines.selfObserver.record({
+                        category: 'tool_usage',
+                        event_type: `parameter:${p.engine}.${p.name}`,
+                        metrics: { value: p.value, min: p.min, max: p.max },
+                    });
+                    count++;
+                }
+            }
+            catch {
+                // ParameterRegistry not ready
+            }
+        }
+        // 1c. System state — 5 observations
+        const systemObs = [
+            { event_type: 'system:engine_count', metrics: { count: this.config.engineCount } },
+            { event_type: 'system:mcp_tool_count', metrics: { count: this.config.mcpToolCount } },
+            { event_type: 'system:startup_time', metrics: { timestamp: Date.now() } },
+            { event_type: 'system:memory_rss', metrics: { bytes: process.memoryUsage().rss } },
+            { event_type: 'system:version', metrics: { version: this.config.version, brain: this.config.brainName } },
+        ];
+        for (const obs of systemObs) {
+            this.engines.selfObserver.record({
+                category: 'tool_usage',
+                event_type: obs.event_type,
+                metrics: obs.metrics,
+            });
+            count++;
+        }
+        this.log.info(`[bootstrap] Phase 1: ${count} observations seeded`);
+        return count;
+    }
+    // ── Phase 2: Seed Journal ─────────────────────────────
+    seedJournal() {
+        if (!this.engines.journal)
+            return 0;
+        let count = 0;
+        const { brainName, version, engineCount, mcpToolCount } = this.config;
+        // Entry 1: Brain initialized
+        this.engines.journal.write({
+            type: 'milestone',
+            title: `${brainName} initialized (v${version})`,
+            content: `Brain started with ${engineCount} engines and ${mcpToolCount} MCP tools. Cold-start bootstrap active.`,
+            tags: [brainName, 'bootstrap', 'init'],
+            references: [],
+            significance: 'notable',
+            data: { version, engineCount, mcpToolCount, phase: 'bootstrap' },
+        });
+        count++;
+        // Entry 2: Architecture baseline
+        const tableCounts = {};
+        for (const table of RESEARCH_TABLES) {
+            try {
+                const row = this.db.prepare(`SELECT COUNT(*) as cnt FROM ${table}`).get();
+                tableCounts[table] = row.cnt;
+            }
+            catch {
+                // skip
+            }
+        }
+        this.engines.journal.write({
+            type: 'discovery',
+            title: 'Architecture baseline recorded',
+            content: `Database has ${Object.keys(tableCounts).length} research tables. ${JSON.stringify(tableCounts)}`,
+            tags: [brainName, 'bootstrap', 'baseline'],
+            references: [],
+            significance: 'routine',
+            data: { tableCounts },
+        });
+        count++;
+        // Entry 3: Cold-start bootstrap complete
+        this.engines.journal.write({
+            type: 'discovery',
+            title: 'Cold-start bootstrap complete',
+            content: 'Initial seed data generated from self-introspection. Engines should now have enough data to produce output from cycle 1.',
+            tags: [brainName, 'bootstrap', 'cold-start'],
+            references: [],
+            significance: 'routine',
+            data: { phase: 'complete' },
+        });
+        count++;
+        // Entry 4: Parameter count (only if registry available)
+        if (this.engines.parameterRegistry) {
+            try {
+                const params = this.engines.parameterRegistry.list();
+                this.engines.journal.write({
+                    type: 'discovery',
+                    title: `${params.length} tunable parameters registered`,
+                    content: `ParameterRegistry contains ${params.length} parameters across ${new Set(params.map(p => p.engine)).size} engines.`,
+                    tags: [brainName, 'bootstrap', 'parameters'],
+                    references: [],
+                    significance: 'routine',
+                    data: { parameterCount: params.length },
+                });
+                count++;
+            }
+            catch {
+                // skip
+            }
+        }
+        this.log.info(`[bootstrap] Phase 2: ${count} journal entries seeded`);
+        return count;
+    }
+    // ── Phase 3: Seed Hypotheses ──────────────────────────
+    seedHypotheses() {
+        if (!this.engines.hypothesisEngine)
+            return 0;
+        let count = 0;
+        const seeds = [
+            {
+                statement: 'Higher dream.prune_threshold leads to fewer but higher-quality memories',
+                variables: ['dream.prune_threshold', 'memory_quality'],
+                condition: { type: 'correlation', params: { strategy: 'bootstrap_seed', domain: 'dream' } },
+            },
+            {
+                statement: 'Attention decay rate correlates with focus duration',
+                variables: ['attention.decay_rate', 'focus_duration'],
+                condition: { type: 'correlation', params: { strategy: 'bootstrap_seed', domain: 'attention' } },
+            },
+            {
+                statement: 'More observation types lead to more hypotheses per cycle',
+                variables: ['observation_type_count', 'hypothesis_per_cycle'],
+                condition: { type: 'correlation', params: { strategy: 'bootstrap_seed', domain: 'hypothesis' } },
+            },
+            {
+                statement: 'Journal entry count grows linearly over cycles',
+                variables: ['journal_entries', 'cycle_count'],
+                condition: { type: 'threshold', params: { strategy: 'bootstrap_seed', domain: 'journal' } },
+            },
+        ];
+        for (const seed of seeds) {
+            // Duplicate check
+            const existing = this.db.prepare("SELECT id FROM hypotheses WHERE statement = ? AND status != 'rejected'").get(seed.statement);
+            if (existing)
+                continue;
+            try {
+                this.engines.hypothesisEngine.propose({
+                    statement: seed.statement,
+                    type: 'correlation',
+                    source: 'bootstrap',
+                    variables: seed.variables,
+                    condition: seed.condition,
+                });
+                count++;
+            }
+            catch {
+                // skip
+            }
+        }
+        this.log.info(`[bootstrap] Phase 3: ${count} hypotheses seeded`);
+        return count;
+    }
+    // ── Phase 4: Seed Predictions ─────────────────────────
+    seedPredictions() {
+        if (!this.engines.predictionEngine)
+            return 0;
+        let count = 0;
+        const now = Date.now();
+        const metricsToSeed = ['journal_entries', 'observation_count', 'hypothesis_count'];
+        for (const metric of metricsToSeed) {
+            // Seed 5 data points with slightly varying values over the last 5 intervals
+            for (let i = 4; i >= 0; i--) {
+                const timestamp = now - (i * 300_000); // 5-min intervals
+                const baseValue = metric === 'journal_entries' ? 3 + i : metric === 'observation_count' ? 10 + i * 2 : 1 + i;
+                this.db.prepare(`
+          INSERT INTO prediction_metrics (metric, value, domain, timestamp) VALUES (?, ?, ?, ?)
+        `).run(metric, baseValue, 'metric', timestamp);
+                count++;
+            }
+        }
+        this.log.info(`[bootstrap] Phase 4: ${count} prediction data points seeded`);
+        return count;
+    }
+    // ── Phase 5: Seed Metrics ─────────────────────────────
+    seedMetrics() {
+        if (!this.engines.anomalyDetective)
+            return 0;
+        let count = 0;
+        const now = Date.now();
+        const anomalyMetrics = ['insight_count', 'anomaly_count', 'cycle_duration_ms', 'journal_entries', 'hypothesis_count'];
+        for (const metric of anomalyMetrics) {
+            // Seed 5 baseline data points over the last 5 intervals
+            for (let i = 4; i >= 0; i--) {
+                const timestamp = now - (i * 300_000);
+                let baseValue;
+                switch (metric) {
+                    case 'insight_count':
+                        baseValue = 1 + Math.floor(i * 0.5);
+                        break;
+                    case 'anomaly_count':
+                        baseValue = 0;
+                        break;
+                    case 'cycle_duration_ms':
+                        baseValue = 150 + i * 10;
+                        break;
+                    case 'journal_entries':
+                        baseValue = 3 + i;
+                        break;
+                    case 'hypothesis_count':
+                        baseValue = 1 + i;
+                        break;
+                    default: baseValue = 0;
+                }
+                this.db.prepare(`
+          INSERT INTO metric_history (metric, value, timestamp) VALUES (?, ?, ?)
+        `).run(metric, baseValue, timestamp);
+                count++;
+            }
+        }
+        this.log.info(`[bootstrap] Phase 5: ${count} anomaly baseline metrics seeded`);
+        return count;
+    }
+}
+//# sourceMappingURL=bootstrap-service.js.map

package/dist/research/bootstrap-service.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"bootstrap-service.js","sourceRoot":"","sources":["../../src/research/bootstrap-service.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,SAAS,EAAE,MAAM,oBAAoB,CAAC;AA6C/C,2DAA2D;AAE3D,MAAM,eAAe,GAAG;IACtB,mBAAmB,EAAE,eAAe,EAAE,kBAAkB,EAAE,YAAY,EAAE,cAAc;IACtF,WAAW,EAAE,gBAAgB,EAAE,aAAa,EAAE,gBAAgB,EAAE,iBAAiB;IACjF,qBAAqB,EAAE,2BAA2B,EAAE,eAAe,EAAE,cAAc;IACnF,aAAa,EAAE,oBAAoB,EAAE,eAAe;CACrD,CAAC;AAEF,2DAA2D;AAE3D,MAAM,UAAU,qBAAqB,CAAC,EAAqB;IACzD,EAAE,CAAC,IAAI,CAAC;;;;;;;;;;;;GAYP,CAAC,CAAC;AACL,CAAC;AAED,2DAA2D;AAE3D,MAAM,OAAO,gBAAgB;IACnB,EAAE,CAAoB;IACtB,MAAM,CAAkB;IACxB,OAAO,GAAqB,EAAE,CAAC;IAC/B,GAAG,GAAG,SAAS,EAAE,CAAC;IAE1B,YAAY,EAAqB,EAAE,MAAuB;QACxD,IAAI,CAAC,EAAE,GAAG,EAAE,CAAC;QACb,IAAI,CAAC,MAAM,GAAG,MAAM,CAAC;QACrB,qBAAqB,CAAC,EAAE,CAAC,CAAC;IAC5B,CAAC;IAED,gFAAgF;IAChF,UAAU,CAAC,OAAyB;QAClC,IAAI,CAAC,OAAO,GAAG,OAAO,CAAC;IACzB,CAAC;IAED,8DAA8D;IAC9D,SAAS;QACP,MAAM,KAAK,GAAG,IAAI,CAAC,QAAQ,EAAE,CAAC;QAC9B,IAAI,KAAK,CAAC,YAAY,EAAE,CAAC;YACvB,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,uCAAuC,KAAK,CAAC,eAAe,EAAE,CAAC,CAAC;YAC9E,OAAO,EAAE,mBAAmB,EAAE,IAAI,EAAE,YAAY,EAAE,CAAC,EAAE,cAAc,EAAE,CAAC,EAAE,UAAU,EAAE,CAAC,EAAE,WAAW,EAAE,CAAC,EAAE,OAAO,EAAE,CAAC,EAAE,CAAC;QACtH,CAAC;QAED,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,iDAAiD,IAAI,CAAC,MAAM,CAAC,SAAS,KAAK,CAAC,CAAC;QAC3F,MAAM,KAAK,GAAG,IAAI,CAAC,GAAG,EAAE,CAAC;QAEzB,MAAM,YAAY,GAAG,IAAI,CAAC,gBAAgB,EAAE,CAAC;QAC7C,MAAM,cAAc,GAAG,IAAI,CAAC,WAAW,EAAE,CAAC;QAC1C,MAAM,UAAU,GAAG,IAAI,CAAC,cAAc,EAAE,CAAC;QACzC,MAAM,WAAW,GAAG,IAAI,CAAC,eAAe,EAAE,CAAC;QAC3C,MAAM,OAAO,GAAG,IAAI,CAAC,WAAW,EAAE,CAAC;QAEnC,uBAAuB;QACvB,IAAI,CAAC,EAAE,CAAC,OAAO,CAAC;;;;;;;;;;KAUf,CAAC,CAAC,GAAG,CAAC,IAAI,CAAC,GAAG,EAAE,EAAE,YAAY,EAAE,cAAc,EAAE,UAAU,EAAE,WAAW,CAAC,CAAC;QAE1E,MAAM,QAAQ,GAAG,IAAI,CAAC,GAAG,EAAE,GAAG,KAAK,CAAC;QACpC,IAAI,CAAC,GAAG,CAAC,IAAI,CACX,2BAA2B,QAAQ,OAAO,YAAY,kBAAkB,cAAc,YAAY;YAClG,GAAG,UAAU,gBAAgB,WAAW,iBAAiB,OAAO,iBAAiB,CAClF,CAAC;QAEF,OAAO,EAAE,mBAAmB,EAAE,KAAK,EAAE,YAAY,EAAE,cAAc,EAAE,UAAU,EAAE,WAAW,EAAE,OAAO,EAAE,CAAC;IACxG,CAAC;IAED,mCAAmC;IACnC,QAAQ;QACN,MAAM,GAAG,GAAG,IAAI,CAAC,EAAE,CAAC,OAAO,CAAC,4CAA4C,CAAC,CAAC,GAAG,EAQhE,CAAC;QAEd,IAAI,CAAC,GAAG,EAAE,CAAC;YACT,OAAO,EAAE,YAAY,EAAE,KAAK,EAAE,eAAe,EAAE,IAAI,EAAE,mBAAmB,EAAE,CAAC,EAAE,sBAAsB,EAAE,CAAC,EAAE,iBAAiB,EAAE,CAAC,EAAE,kBAAkB,EAAE,CAAC,EAAE,UAAU,EAAE,EAAE,EAAE,CAAC;QACxK,CAAC;QAED,OAAO;YACL,YAAY,EAAE,GAAG,CAAC,YAAY,KAAK,CAAC;YACpC,eAAe,EAAE,GAAG,CAAC,eAAe;YACpC,mBAAmB,EAAE,GAAG,CAAC,mBAAmB;YAC5C,sBAAsB,EAAE,GAAG,CAAC,sBAAsB;YAClD,iBAAiB,EAAE,GAAG,CAAC,iBAAiB;YACxC,kBAAkB,EAAE,GAAG,CAAC,kBAAkB;YAC1C,UAAU,EAAE,GAAG,CAAC,UAAU;SAC3B,CAAC;IACJ,CAAC;IAED,yDAAyD;IAEjD,gBAAgB;QACtB,IAAI,CAAC,IAAI,CAAC,OAAO,CAAC,YAAY;YAAE,OAAO,CAAC,CAAC;QAEzC,IAAI,KAAK,GAAG,CAAC,CAAC;QAEd,2DAA2D;QAC3D,KAAK,MAAM,KAAK,IAAI,eAAe,EAAE,CAAC;YACpC,IAAI,CAAC;gBACH,MAAM,GAAG,GAAG,IAAI,CAAC,EAAE,CAAC,OAAO,CAAC,+BAA+B,KAAK,EAAE,CAAC,CAAC,GAAG,EAAqB,CAAC;gBAC7F,IAAI,CAAC,OAAO,CAAC,YAAY,CAAC,MAAM,CAAC;oBAC/B,QAAQ,EAAE,YAAY;oBACtB,UAAU,EAAE,cAAc,KAAK,EAAE;oBACjC,OAAO,EAAE,EAAE,SAAS,EAAE,GAAG,CAAC,GAAG,EAAE,KAAK,EAAE;iBACvC,CAAC,CAAC;gBACH,KAAK,EAAE,CAAC;YACV,CAAC;YAAC,MAAM,CAAC;gBACP,iCAAiC;YACnC,CAAC;QACH,CAAC;QAED,qDAAqD;QACrD,IAAI,IAAI,CAAC,OAAO,CAAC,iBAAiB,EAAE,CAAC;YACnC,IAAI,CAAC;gBACH,MAAM,MAAM,GAAG,IAAI,CAAC,OAAO,CAAC,iBAAiB,CAAC,IAAI,EAAE,CAAC;gBACrD,MAAM,MAAM,GAAG,MAAM,CAAC,KAAK,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;gBACnC,KAAK,MAAM,CAAC,IAAI,MAAM,EAAE,CAAC;oBACvB,IAAI,CAAC,OAAO,CAAC,YAAY,CAAC,MAAM,CAAC;wBAC/B,QAAQ,EAAE,YAAY;wBACtB,UAAU,EAAE,aAAa,CAAC,CAAC,MAAM,IAAI,CAAC,CAAC,IAAI,EAAE;wBAC7C,OAAO,EAAE,EAAE,KAAK,EAAE,CAAC,CAAC,KAAK,EAAE,GAAG,EAAE,CAAC,CAAC,GAAG,EAAE,GAAG,EAAE,CAAC,CAAC,GAAG,EAAE;qBACpD,CAAC,CAAC;oBACH,KAAK,EAAE,CAAC;gBACV,CAAC;YACH,CAAC;YAAC,MAAM,CAAC;gBACP,8BAA8B;YAChC,CAAC;QACH,CAAC;QAED,oCAAoC;QACpC,MAAM,SAAS,GAAoE;YACjF,EAAE,UAAU,EAAE,qBAAqB,EAAE,OAAO,EAAE,EAAE,KAAK,EAAE,IAAI,CAAC,MAAM,CAAC,WAAW,EAAE,EAAE;YAClF,EAAE,UAAU,EAAE,uBAAuB,EAAE,OAAO,EAAE,EAAE,KAAK,EAAE,IAAI,CAAC,MAAM,CAAC,YAAY,EAAE,EAAE;YACrF,EAAE,UAAU,EAAE,qBAAqB,EAAE,OAAO,EAAE,EAAE,SAAS,EAAE,IAAI,CAAC,GAAG,EAAE,EAAE,EAAE;YACzE,EAAE,UAAU,EAAE,mBAAmB,EAAE,OAAO,EAAE,EAAE,KAAK,EAAE,OAAO,CAAC,WAAW,EAAE,CAAC,GAAG,EAAE,EAAE;YAClF,EAAE,UAAU,EAAE,gBAAgB,EAAE,OAAO,EAAE,EAAE,OAAO,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE,KAAK,EAAE,IAAI,CAAC,MAAM,CAAC,SAAS,EAAE,EAAE;SAC1G,CAAC;QAEF,KAAK,MAAM,GAAG,IAAI,SAAS,EAAE,CAAC;YAC5B,IAAI,CAAC,OAAO,CAAC,YAAY,CAAC,MAAM,CAAC;gBAC/B,QAAQ,EAAE,YAAY;gBACtB,UAAU,EAAE,GAAG,CAAC,UAAU;gBAC1B,OAAO,EAAE,GAAG,CAAC,OAAO;aACrB,CAAC,CAAC;YACH,KAAK,EAAE,CAAC;QACV,CAAC;QAED,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,wBAAwB,KAAK,sBAAsB,CAAC,CAAC;QACnE,OAAO,KAAK,CAAC;IACf,CAAC;IAED,yDAAyD;IAEjD,WAAW;QACjB,IAAI,CAAC,IAAI,CAAC,OAAO,CAAC,OAAO;YAAE,OAAO,CAAC,CAAC;QAEpC,IAAI,KAAK,GAAG,CAAC,CAAC;QACd,MAAM,EAAE,SAAS,EAAE,OAAO,EAAE,WAAW,EAAE,YAAY,EAAE,GAAG,IAAI,CAAC,MAAM,CAAC;QAEtE,6BAA6B;QAC7B,IAAI,CAAC,OAAO,CAAC,OAAO,CAAC,KAAK,CAAC;YACzB,IAAI,EAAE,WAAW;YACjB,KAAK,EAAE,GAAG,SAAS,kBAAkB,OAAO,GAAG;YAC/C,OAAO,EAAE,sBAAsB,WAAW,gBAAgB,YAAY,0CAA0C;YAChH,IAAI,EAAE,CAAC,SAAS,EAAE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package/dist/research/data-miner.d.ts

@@ -60,6 +60,7 @@ export interface DataMinerEngines {
 export interface DataMinerState {
     last_mined_at: number;
     bootstrap_complete: boolean;
+    bootstrap_attempts: number;
     total_observations_mined: number;
     total_causal_events_mined: number;
     total_metrics_mined: number;

package/dist/research/data-miner.js

@@ -6,6 +6,7 @@ export function runDataMinerMigration(db) {
       id INTEGER PRIMARY KEY CHECK (id = 1),
       last_mined_at INTEGER NOT NULL DEFAULT 0,
       bootstrap_complete INTEGER NOT NULL DEFAULT 0,
+      bootstrap_attempts INTEGER NOT NULL DEFAULT 0,
       total_observations_mined INTEGER NOT NULL DEFAULT 0,
       total_causal_events_mined INTEGER NOT NULL DEFAULT 0,
       total_metrics_mined INTEGER NOT NULL DEFAULT 0,
@@ -13,6 +14,13 @@ export function runDataMinerMigration(db) {
     );
     INSERT OR IGNORE INTO data_miner_state (id) VALUES (1);
   `);
+    // Graceful ALTER TABLE for existing DBs
+    try {
+        db.exec('ALTER TABLE data_miner_state ADD COLUMN bootstrap_attempts INTEGER NOT NULL DEFAULT 0');
+    }
+    catch {
+        // Column already exists
+    }
 }
 // ── DataMiner ───────────────────────────────────────────
 export class DataMiner {
@@ -41,15 +49,22 @@ export class DataMiner {
             return;
         }
         const names = this.adapters.map(a => a.name).join(', ');
-        this.log.info(`[data-miner] Bootstrapping ${names} — scanning all historical data...`);
+        this.state.bootstrap_attempts++;
+        this.log.info(`[data-miner] Bootstrapping ${names} — attempt ${this.state.bootstrap_attempts}, scanning all historical data...`);
         const start = Date.now();
         // Mine everything from epoch
         const result = this.mineFrom(0);
-        this.state.bootstrap_complete = true;
+        // Only mark complete if we actually mined something, OR safety valve after 10 attempts
+        if (result.total > 0 || this.state.bootstrap_attempts >= 10) {
+            this.state.bootstrap_complete = true;
+            if (result.total === 0) {
+                this.log.info(`[data-miner] Safety valve: marking bootstrap complete after ${this.state.bootstrap_attempts} attempts with 0 items (BootstrapService will seed data instead)`);
+            }
+        }
         this.state.last_mined_at = Date.now();
         this.saveState();
         const duration = Date.now() - start;
-        this.log.info(`[data-miner] Bootstrap complete for ${names} in ${duration}ms — ` +
+        this.log.info(`[data-miner] Bootstrap ${this.state.bootstrap_complete ? 'complete' : 'incomplete (0 items)'} for ${names} in ${duration}ms — ` +
             `${result.observations} observations, ${result.causalEvents} causal events, ` +
             `${result.metrics} metrics, ${result.hypothesisObs} hypothesis observations, ` +
             `${result.crossDomain} cross-domain events`);
@@ -158,11 +173,12 @@ export class DataMiner {
     loadState() {
         const row = this.db.prepare('SELECT * FROM data_miner_state WHERE id = 1').get();
         if (!row) {
-            return { last_mined_at: 0, bootstrap_complete: false, total_observations_mined: 0, total_causal_events_mined: 0, total_metrics_mined: 0 };
+            return { last_mined_at: 0, bootstrap_complete: false, bootstrap_attempts: 0, total_observations_mined: 0, total_causal_events_mined: 0, total_metrics_mined: 0 };
         }
         return {
             last_mined_at: row.last_mined_at,
             bootstrap_complete: row.bootstrap_complete === 1,
+            bootstrap_attempts: row.bootstrap_attempts ?? 0,
             total_observations_mined: row.total_observations_mined,
             total_causal_events_mined: row.total_causal_events_mined,
             total_metrics_mined: row.total_metrics_mined,
@@ -173,12 +189,13 @@ export class DataMiner {
       UPDATE data_miner_state SET
         last_mined_at = ?,
         bootstrap_complete = ?,
+        bootstrap_attempts = ?,
         total_observations_mined = ?,
         total_causal_events_mined = ?,
         total_metrics_mined = ?,
         updated_at = datetime('now')
       WHERE id = 1
-    `).run(this.state.last_mined_at, this.state.bootstrap_complete ? 1 : 0, this.state.total_observations_mined, this.state.total_causal_events_mined, this.state.total_metrics_mined);
+    `).run(this.state.last_mined_at, this.state.bootstrap_complete ? 1 : 0, this.state.bootstrap_attempts, this.state.total_observations_mined, this.state.total_causal_events_mined, this.state.total_metrics_mined);
     }
 }
 //# sourceMappingURL=data-miner.js.map

package/dist/research/data-miner.js.map

@@ -1 +1 @@
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package/dist/research/research-orchestrator.d.ts

@@ -36,6 +36,9 @@ import type { GoalEngine } from '../goals/goal-engine.js';
 import type { EvolutionEngine } from '../metacognition/evolution-engine.js';
 import type { ReasoningEngine } from '../reasoning/reasoning-engine.js';
 import type { EmotionalModel } from '../emotional/emotional-model.js';
+import type { SelfScanner } from '../self-scanner/self-scanner.js';
+import type { SelfModificationEngine } from '../self-modification/self-modification-engine.js';
+import type { BootstrapService } from './bootstrap-service.js';
 import { AutoResponder } from './auto-responder.js';
 export interface ResearchOrchestratorConfig {
     brainName: string;
@@ -86,6 +89,9 @@ export declare class ResearchOrchestrator {
     private evolutionEngine;
     private reasoningEngine;
     private emotionalModel;
+    private selfScanner;
+    private selfModificationEngine;
+    private bootstrapService;
     private brainName;
     private feedbackTimer;
     private cycleCount;
@@ -146,6 +152,12 @@ export declare class ResearchOrchestrator {
     /** Set the ReasoningEngine — multi-step logical inference chains. */
     setReasoningEngine(engine: ReasoningEngine): void;
     setEmotionalModel(model: EmotionalModel): void;
+    /** Set the SelfScanner — indexes own source code for self-modification context. */
+    setSelfScanner(scanner: SelfScanner): void;
+    /** Set the SelfModificationEngine — generates and applies code changes autonomously. */
+    setSelfModificationEngine(engine: SelfModificationEngine): void;
+    /** Set the BootstrapService — seeds initial data on first cycle. */
+    setBootstrapService(service: BootstrapService): void;
     /** Set the PredictionEngine — wires journal into it. */
     setPredictionEngine(engine: PredictionEngine): void;
     /** Start the autonomous feedback loop timer. */
@@ -192,6 +204,8 @@ export declare class ResearchOrchestrator {
     /** Append improvement suggestions to ~/.brain/improvement-requests.md.
      *  Skips writing if suggestions are identical to the last write (dedup). */
     private writeSuggestionsToFile;
+    /** Find a concrete self-improvement suggestion that maps to specific files. */
+    private findActionableSuggestion;
     /** Get a comprehensive research summary for dashboards/API. */
     getSummary(): Record<string, unknown>;
 }