@tichopad/notes-query-tool 0.1.0

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Files changed (13) hide show
  1. package/README.md +93 -0
  2. package/dist/drizzle/0000_supreme_baron_strucker.sql +2 -0
  3. package/dist/drizzle/0001_keen_komodo.sql +24 -0
  4. package/dist/drizzle/0002_pg_trgm.sql +3 -0
  5. package/dist/drizzle/0003_wooden_spacker_dave.sql +12 -0
  6. package/dist/drizzle/meta/0000_snapshot.json +18 -0
  7. package/dist/drizzle/meta/0001_snapshot.json +193 -0
  8. package/dist/drizzle/meta/0002_snapshot.json +193 -0
  9. package/dist/drizzle/meta/0003_snapshot.json +265 -0
  10. package/dist/drizzle/meta/_journal.json +34 -0
  11. package/dist/main.js +26 -0
  12. package/dist/main.js.map +6 -0
  13. package/package.json +61 -0
package/README.md ADDED
@@ -0,0 +1,93 @@
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+ # notes-query-tool
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+
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+ **Prerequisites:** Node.js >= 24, pnpm >= 10
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+
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+ Load and index notes:
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+ `pnpm run dev load --glob "testdata/**/*.md"`
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+
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+ Query notes:
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+ `pnpm run dev query --vector/-v <semantic query> --fulltext/-f <keyword query>`
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+
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+ Both `--vector` and `--fulltext` flags are required.
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+
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+ An optional `--trigram` / `-g` flag passes a separate plain-text query to the trigram leg. When omitted, the trigram leg falls back to the `--fulltext` value (preserving existing behaviour). Use this when `--fulltext` contains PostgreSQL websearch syntax (`OR`, `-word`, `"phrases"`) that would corrupt trigram scoring.
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+
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+ An optional `--trigram-mode` / `-t` flag selects the trigram operator: `strict` (default, uses `strict_word_similarity`) or `word` (uses `word_similarity`).
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+
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+ ## Bases
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+
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+ A **base** is a named, isolated collection of notes. All files loaded into the index belong to exactly one base, and queries are scoped to a single base — results from one base never appear in another.
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+
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+ The default base is named `default`. Pass `--base <name>` to either command to use a different one. A base is created automatically on first load.
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+
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+ ```sh
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+ # Load notes into a named base
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+ pnpm run dev load --base work --glob "work-notes/**/*.md"
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+ pnpm run dev load --base personal --glob "personal/**/*.md"
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+
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+ # Query within a specific base
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+ pnpm run dev query --base work -v "project deadlines" -f "deadline project"
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+
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+ # Querying a base that doesn't exist exits with an error
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+ pnpm run dev query --base nonexistent -v "anything" -f "anything"
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+
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+ # Drop a base and all its indexed data (prompts for confirmation)
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+ pnpm run dev drop --base work
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+
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+ # Drop without confirmation (useful for scripting)
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+ pnpm run dev drop --base work --force
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+ ```
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+
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+ ## Search channels
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+
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+ Three parallel channels run on every query and are fused by weighted score (vector 0.3 / FTS 0.4 / trigram 0.3):
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+
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+ - **Vector** — dense cosine similarity on chunk embeddings. Best for semantic / paraphrase queries.
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+ - **FTS** — PostgreSQL full-text search via `tsvector`/`websearch_to_tsquery`. Supports websearch syntax: `OR`, `-word`, `"exact phrase"`. Best for keyword matching.
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+ - **Trigram** *(experimental)* — `pg_trgm` word-distance matching on raw chunk content via `strict_word_similarity` (default) or `word_similarity`. Uses `--trigram` text (or `--fulltext` if not specified). Best for proper-noun and lexical queries that FTS tokenisation misses.
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+
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+ The trigram threshold is fixed at 0.3. Use `--trigram-mode strict` for precision (fewer but higher-confidence matches) or `--trigram-mode word` for recall (more matches, looser).
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+
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+ ### Re-loading notes after a fresh database
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+
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+ If you need to reset the database (e.g. after schema migrations), run:
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+
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+ ```bash
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+ rm -rf dbdata/
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+ pnpm run dev load --glob 'notes/**/*.md'
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+ ```
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+
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+ ## Development
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+
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+ ### Ad-hoc SQL queries
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+
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+ Run arbitrary SQL against the local PGLite DB (in `./dbdata/`):
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+
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+ ```bash
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+ pnpm run db:query "SELECT id, path FROM notes LIMIT 5"
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+ # or via stdin
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+ pnpm run db:query <<'SQL'
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+ SELECT count(*) FROM chunks;
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+ SQL
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+ ```
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+
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+ Output is terse TSV designed for agents/scripts. Vector columns are abbreviated. Row output capped at 200 rows (override with `DB_QUERY_LIMIT`). Multi-statement input supported.
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+
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+ ## Examples
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+
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+ ```sh
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+ # Full flags
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+ pnpm run dev query --vector "Who is my girlfriend and what does she like?" --fulltext "girlfriend interests hobbies"
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+
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+ # Short aliases
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+ pnpm run dev query -v "What are my long-term career goals?" -f "career goals plans"
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+
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+ # Mixed
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+ pnpm run dev query --vector "Summarize my thoughts on stoicism" -f "stoicism notes"
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+
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+ # Split --fulltext (websearch syntax) from --trigram (plain text)
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+ pnpm run dev query -v "async programming patterns" -f "javascript OR python" -g "javascript"
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+
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+ # FTS with phrase exclusion; trigram stays clean
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+ pnpm run dev query -v "nutrition advice" -f '"meal prep" -fast food' -g "meal prep"
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+ ```
package/dist/drizzle/0000_supreme_baron_strucker.sql ADDED
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+ CREATE EXTENSION IF NOT EXISTS vector;--> statement-breakpoint
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+ CREATE EXTENSION IF NOT EXISTS unaccent;
package/dist/drizzle/0001_keen_komodo.sql ADDED
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+ CREATE TABLE "chunks" (
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+ "id" integer PRIMARY KEY GENERATED ALWAYS AS IDENTITY (sequence name "chunks_id_seq" INCREMENT BY 1 MINVALUE 1 MAXVALUE 2147483647 START WITH 1 CACHE 1),
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+ "file_id" integer NOT NULL,
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+ "chunk_index" integer NOT NULL,
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+ "content" text NOT NULL,
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+ "breadcrumbs" text[] NOT NULL,
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+ "embedding" vector(768),
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+ "fts" "tsvector",
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+ "created_at" timestamp DEFAULT now() NOT NULL,
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+ "updated_at" timestamp DEFAULT now() NOT NULL
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+ );
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+ --> statement-breakpoint
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+ CREATE TABLE "files" (
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+ "id" integer PRIMARY KEY GENERATED ALWAYS AS IDENTITY (sequence name "files_id_seq" INCREMENT BY 1 MINVALUE 1 MAXVALUE 2147483647 START WITH 1 CACHE 1),
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+ "file_path" text NOT NULL,
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+ "content_hash" text NOT NULL,
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+ "attributes" jsonb,
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+ "created_at" timestamp DEFAULT now() NOT NULL,
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+ "updated_at" timestamp DEFAULT now() NOT NULL,
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+ CONSTRAINT "files_file_path_unique" UNIQUE("file_path")
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+ );
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+ --> statement-breakpoint
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+ ALTER TABLE "chunks" ADD CONSTRAINT "chunks_file_id_files_id_fk" FOREIGN KEY ("file_id") REFERENCES "public"."files"("id") ON DELETE cascade ON UPDATE no action;--> statement-breakpoint
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+ CREATE INDEX "chunks_fts_idx" ON "chunks" USING gin ("fts");
package/dist/drizzle/0002_pg_trgm.sql ADDED
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+ CREATE EXTENSION IF NOT EXISTS pg_trgm;--> statement-breakpoint
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+ CREATE INDEX IF NOT EXISTS chunks_content_trgm_idx
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+ ON chunks USING gin (content gin_trgm_ops);
package/dist/drizzle/0003_wooden_spacker_dave.sql ADDED
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+ CREATE TABLE "bases" (
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+ "id" integer PRIMARY KEY GENERATED ALWAYS AS IDENTITY (sequence name "bases_id_seq" INCREMENT BY 1 MINVALUE 1 MAXVALUE 2147483647 START WITH 1 CACHE 1),
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+ "name" text NOT NULL,
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+ "created_at" timestamp DEFAULT now() NOT NULL,
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+ "updated_at" timestamp DEFAULT now() NOT NULL,
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+ CONSTRAINT "bases_name_unique" UNIQUE("name")
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+ );
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+ --> statement-breakpoint
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+ ALTER TABLE "files" DROP CONSTRAINT "files_file_path_unique";--> statement-breakpoint
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+ ALTER TABLE "files" ADD COLUMN "base_id" integer NOT NULL;--> statement-breakpoint
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+ ALTER TABLE "files" ADD CONSTRAINT "files_base_id_bases_id_fk" FOREIGN KEY ("base_id") REFERENCES "public"."bases"("id") ON DELETE cascade ON UPDATE no action;--> statement-breakpoint
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+ ALTER TABLE "files" ADD CONSTRAINT "files_base_id_file_path_unique" UNIQUE("base_id","file_path");
package/dist/drizzle/meta/0000_snapshot.json ADDED
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package/dist/drizzle/meta/0001_snapshot.json ADDED
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+ "breadcrumbs": {
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+ "name": "breadcrumbs",
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+ "type": "text[]",
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+ "primaryKey": false,
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+ "notNull": true
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+ },
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+ "embedding": {
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+ "name": "embedding",
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+ "type": "vector(768)",
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+ "primaryKey": false,
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+ "notNull": false
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+ },
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+ "fts": {
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+ "name": "fts",
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+ "type": "tsvector",
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+ "primaryKey": false,
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+ "notNull": false
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+ "created_at": {
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+ "chunks_fts_idx": {
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+ "name": "chunks_fts_idx",
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+ "asc": true,
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+ "isUnique": false,
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+ "concurrently": false,
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+ "method": "gin",
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+ "with": {}
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+ "foreignKeys": {
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+ "chunks_file_id_files_id_fk": {
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+ "name": "chunks_file_id_files_id_fk",
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+ "tableFrom": "chunks",
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+ "tableTo": "files",
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+ "columnsFrom": ["file_id"],
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+ "columnsTo": ["id"],
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+ "onDelete": "cascade",
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+ "content_hash": {
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+ }
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+ },
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+ "policies": {},
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+ "views": {},
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+ "_meta": {
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+ "columns": {},
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+ "schemas": {},
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+ "tables": {}
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+ }
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+ }
package/dist/drizzle/meta/0002_snapshot.json ADDED
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+ }
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+ }
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+ `:"").length+u.length<=t?o={text:u,breadcrumb:o.breadcrumb,startOffset:o.startOffset,endOffset:a.endOffset}:(r.push(o),o=a)}return r.push(o),r}function St(e,t){if(e.length!==t.length)return!1;for(let r=0;r<e.length;r++)if(e[r]!==t[r])return!1;return!0}import{glob as Dt}from"node:fs/promises";import{basename as _t}from"node:path";async function*$e(e){for await(let t of Dt(e,{withFileTypes:!0,exclude:r=>{let n=_t(r.name);return n!=="."&&n.startsWith(".")}}))t.isFile()&&(yield`${t.parentPath}/${t.name}`)}import{and as Ot,count as Ae,eq as B,sql as U}from"drizzle-orm";import{sql as Ce}from"drizzle-orm";import{customType as At,index as Mt,integer as j,pgTable as Lt,text as ve,timestamp as Fe,vector as Nt}from"drizzle-orm/pg-core";import{sql as Re}from"drizzle-orm";import{integer as Se,jsonb as Ct,pgTable as vt,text as De,timestamp as _e,unique as Ft}from"drizzle-orm/pg-core";var g=vt("files",{id:Se("id").primaryKey().generatedAlwaysAsIdentity(),baseId:Se("base_id").notNull().references(()=>k.id,{onDelete:"cascade"}),filePath:De("file_path").notNull(),contentHash:De("content_hash").notNull(),attributes:Ct("attributes").$type(),createdAt:_e("created_at").notNull().default(Re`now()`),updatedAt:_e("updated_at").notNull().default(Re`now()`)},e=>[Ft().on(e.baseId,e.filePath)]);var Bt=At({dataType(){return"tsvector"}}),f=Lt("chunks",{id:j("id").primaryKey().generatedAlwaysAsIdentity(),fileId:j("file_id").notNull().references(()=>g.id,{onDelete:"cascade"}),chunkIndex:j("chunk_index").notNull(),content:ve("content").notNull(),breadcrumbs:ve("breadcrumbs").array().notNull(),embedding:Nt("embedding",{dimensions:ee}),fts:Bt("fts"),createdAt:Fe("created_at").notNull().default(Ce`now()`),updatedAt:Fe("updated_at").notNull().default(Ce`now()`)},e=>[Mt("chunks_fts_idx").using("gin",e.fts)]);var O=class{db;constructor(t){this.db=t??x()}async getFileProcessingState(t,r){let[n]=await this.db.select({id:g.id,contentHash:g.contentHash}).from(g).where(Ot(B(g.filePath,t),B(g.baseId,r))).limit(1);if(!n)return null;let[o]=await this.db.select({total:Ae(),withEmbedding:Ae(U`CASE WHEN ${f.embedding} IS NOT NULL THEN 1 END`)}).from(f).where(B(f.fileId,n.id)),s=o?.total??0,a=o?.withEmbedding??0,u=s>0&&a===s;return{fileId:n.id,contentHash:n.contentHash,hasStoredChunksWithEmbeddings:u}}async upsertFile(t,r,n,o,s){let a={};n!==null&&(a.title=n);let[u]=await this.db.insert(g).values({filePath:t,contentHash:r,attributes:a,baseId:s}).onConflictDoUpdate({target:[g.baseId,g.filePath],set:{contentHash:r,attributes:a,updatedAt:U`now()`}}).returning({id:g.id});if(!u)throw new Error(`Failed to upsert file: ${t}`);return{id:u.id}}async replaceFileChunks(t,r){await this.db.transaction(async n=>{if(await n.delete(f).where(B(f.fileId,t)),r.length>0){let o=r.map(s=>({fileId:t,chunkIndex:s.chunkIndex,content:s.content,breadcrumbs:s.breadcrumbs,embedding:s.embedding,fts:U`to_tsvector('simple', unaccent(${s.content}))`}));await n.insert(f).values(o)}})}};import K from"node:path";import{parse as Ht}from"yaml";var qt=/^---\r?\n([\s\S]*?)\r?\n---\r?\n?/;function Me(e){let t=e.match(qt);if(!t)return{attributes:null,body:e};try{let r=Ht(t[1]);return{attributes:r&&typeof r=="object"&&!Array.isArray(r)?r:null,body:e.slice(t[0].length)}}catch{return{attributes:null,body:e}}}function zt(e){if(typeof e!="string")return null;let t=e.trim();return t||null}function Le(e){return Array.isArray(e)?e.flatMap(t=>{if(typeof t!="string")return[];let r=t.trim();return r?[r]:[]}):[]}function Gt(e){return e?{title:zt(e.title),aliases:Le(e.aliases),tags:Le(e.tags)}:null}function Ne(e,t,r){let n=[`File: ${e}`,`Path: ${t}`],o=Gt(r);o&&(o.title&&n.push(`Title: ${o.title}`),o.aliases.length>0&&n.push(`Aliases: ${o.aliases.join(", ")}`),o.tags.length>0&&n.push(`Tags: ${o.tags.join(", ")}`));let s=n.join(`
13
+ `),a=[e];o&&(o.title&&o.title!==e&&a.push(o.title),o.aliases.length>0&&a.push(`aliases: ${o.aliases.join(", ")}`),o.tags.length>0&&a.push(`tags: ${o.tags.join(", ")}`));let u=a.join("; ");return{headerPrefix:s,titleString:u}}function Be(e,t){return t===null?{action:"process"}:t.contentHash!==e?{action:"process"}:t.hasStoredChunksWithEmbeddings?{action:"skip"}:{action:"process"}}async function Oe(e,t){let{repo:r,baseId:n,readText:o,hashContent:s,chunkMarkdown:a,embedDocument:u}=t,i=await o(e),d=s(i),c=await r.getFileProcessingState(e,n),l=Be(d,c);if(m.debug(`[${e}] decision: ${l.action}`),l.action==="skip")return m.info(`${e} -> skipped (unchanged)`),{status:"skipped",chunkCount:0};let{attributes:b,body:p}=Me(i),h=K.basename(e,".md"),y=K.basename(K.dirname(e)),{headerPrefix:$,titleString:S}=Ne(h,y,b),P=a(p||i,ne);m.debug(`[${e}] produced ${P.length} chunks`);let{id:A}=await r.upsertFile(e,d,null,new Date,n),M=await Promise.all(P.map(async(D,_)=>{let C=`${$}
14
+
15
+ ${D.text}`,v=D.text.trim(),I=v?await u(v,S):await u(C,S);return m.trace(`[${e}] chunk ${_} embedded (${I.length}d)`),{content:C,embedding:I,chunkIndex:_,breadcrumbs:D.breadcrumb}}));return await r.replaceFileChunks(A,M),m.debug(`[${e}] chunks written to DB`),m.info(`${e} \u2192 ${P.length} chunks`),{status:"processed",chunkCount:P.length}}var He=jt({meta:{name:"load",description:"Load notes files"},args:{glob:{type:"string",description:"Files glob (e.g. 'notes/**/*.md')",required:!0},base:{type:"string",description:"Knowledge base name to use",default:"default"}},async run({args:e}){let t=performance.now();m.debug("Starting load...");let r=0,n=0,o=0,s=0,a=new O,i=await new T().getOrCreateBase(e.base);m.debug(`Using base: ${i.name} (id=${i.id})`);let d=null,c=async(p,h)=>(d||(d=await L(),m.debug("Embedder initialised")),d.embedDocument(p,h)),l=[],b=[];for await(let p of $e(e.glob)){m.debug(`Processing file: ${p}`);let h=await Oe(p,{repo:a,baseId:i.id,readText:y=>Wt(y,"utf8"),hashContent:y=>Qt("sha256").update(y).digest("hex"),chunkMarkdown:Ie,embedDocument:c});l.push(p),b.push(h)}r=l.length;for(let p of b)p.status==="skipped"?n++:(o++,s+=p.chunkCount);console.log(`Done. ${r} files seen, ${o} processed, ${n} skipped, ${s} chunks total.`),console.log(`Time taken: ${((performance.now()-t)/1e3).toFixed(2)}s`)}});import{defineCommand as Jt}from"citty";import{and as V,cosineDistance as Vt,desc as X,eq as E,gt as Xt,sql as w}from"drizzle-orm";import Ut from"node:path";function qe(e,t,r,n){m.trace(`Fusing scores \u2014 vector: ${e.length}, fts: ${t.length}, trigram: ${r.length}`);let o=Math.max(...e.map(i=>i.similarity),1e-9),s=Math.max(...t.map(i=>i.rank),1e-9),a=Math.max(...r.map(i=>i.score),1e-9),u=new Map;for(let i of e)u.set(i.id,{id:i.id,filePath:i.filePath,chunkIndex:i.chunkIndex,breadcrumbs:i.breadcrumbs,content:i.content,score:i.similarity/o*n.vector});for(let i of t){let d=i.rank/s*n.fts,c=u.get(i.id);c?c.score+=d:u.set(i.id,{id:i.id,filePath:i.filePath,chunkIndex:i.chunkIndex,breadcrumbs:i.breadcrumbs,content:i.content,score:d})}for(let i of r){let d=i.score/a*n.trigram,c=u.get(i.id);c?c.score+=d:u.set(i.id,{id:i.id,filePath:i.filePath,chunkIndex:i.chunkIndex,breadcrumbs:i.breadcrumbs,content:i.content,score:d})}return u}function Kt(e){let t=/\[\[([^\]|#]+)(?:[|#][^\]]*)?\]\]/g,r=new Set,n=t.exec(e);for(;n!==null;)n[1]!==void 0&&r.add(n[1].trim()),n=t.exec(e);return[...r]}function ze(e,t,r=me,n=le,o=de){let s=new Map;for(let c of t){let l=Ut.basename(c,".md");s.has(l)||s.set(l,new Set),s.get(l)?.add(c)}let a=new Set([...e.values()].map(c=>c.filePath)),u=[...e.values()].sort((c,l)=>l.score-c.score).slice(0,r),i=new Map;for(let c of u){let l=Kt(c.content);for(let b of l){let p=s.get(b);if(p)for(let h of p){if(h===c.filePath||!a.has(h))continue;let y=i.get(h)??0,$=Math.min(y+n*c.score,o);i.set(h,$),m.trace(`Boosting ${h} by ${($-y).toFixed(4)}`)}}}let d=new Map;for(let[c,l]of e){let b=i.get(l.filePath)??0;d.set(c,b>0?{...l,score:l.score+b}:l)}return d}function Ge(e,t){let r=new Map;for(let n of e.values()){let o=r.get(n.filePath);!o||n.score>o.result.score?r.set(n.filePath,{result:n,extraChunks:o?o.extraChunks+1:0}):o.extraChunks++}return[...r.values()].map(({result:n})=>n).sort((n,o)=>o.score-n.score).slice(0,t)}async function Qe(e){let{vectorText:t,queryText:r,trigramText:n,embedQuery:o,db:s=x(),baseId:a,weights:u={vector:ie,fts:ae,trigram:ue},limits:i={vector:re,fts:oe,trigram:se},trigramThreshold:d=ce,trigramMode:c="strict",topK:l=10}=e,b=await o(t),p=n??r;m.debug(`Executing query \u2014 vector: "${t}", fulltext: "${r}"`);let h=w`1 - (${Vt(f.embedding,b)})`,y=c==="strict"?"strict_word_similarity":"word_similarity",$=c==="strict"?w.raw("<<%"):w.raw("<%"),S=w`${w.raw(y)}(${p}, ${f.content})`,[P,A,M]=await Promise.all([s.select({id:f.id,filePath:g.filePath,chunkIndex:f.chunkIndex,breadcrumbs:f.breadcrumbs,content:f.content,similarity:h}).from(f).innerJoin(g,E(f.fileId,g.id)).where(V(Xt(h,0),E(g.baseId,a))).orderBy(X(h)).limit(i.vector),s.select({id:f.id,filePath:g.filePath,chunkIndex:f.chunkIndex,breadcrumbs:f.breadcrumbs,content:f.content,rank:w`ts_rank(${f.fts}, websearch_to_tsquery('simple', unaccent(${r})))`}).from(f).innerJoin(g,E(f.fileId,g.id)).where(V(w`${f.fts} @@ websearch_to_tsquery('simple', unaccent(${r}))`,E(g.baseId,a))).orderBy(X(w`ts_rank(${f.fts}, websearch_to_tsquery('simple', unaccent(${r})))`)).limit(i.fts),s.transaction(async I=>(await I.execute(w`SELECT set_limit(${d})`),I.select({id:f.id,filePath:g.filePath,chunkIndex:f.chunkIndex,breadcrumbs:f.breadcrumbs,content:f.content,score:S}).from(f).innerJoin(g,E(f.fileId,g.id)).where(V(w`${p} ${$} ${f.content}`,E(g.baseId,a))).orderBy(X(S)).limit(i.trigram)))]);m.debug(`Vector: ${P.length} hits, FTS: ${A.length} hits, Trigram: ${M.length} hits`);let D=await s.select({filePath:g.filePath}).from(g).where(E(g.baseId,a)),_=qe(P,A,M,u);m.debug(`After fusion: ${_.size} unique chunks`);let C=ze(_,D.map(I=>I.filePath));m.debug(`After wikilink rerank: ${C.size} chunks`);let v=Ge(C,l);return m.debug(`Returning ${v.length} results`),v}var We=Jt({meta:{name:"query",description:"Search notes by semantic query"},args:{vector:{type:"string",alias:"v",description:"Semantic query for vector search",required:!0},fulltext:{type:"string",alias:"f",description:'Keyword query for full-text search (supports PostgreSQL websearch syntax: OR, -word, "phrases")',required:!0},trigram:{type:"string",alias:"g",description:"Plain-text keyword for trigram search (defaults to --fulltext)",required:!1},trigramMode:{type:"string",alias:"t",description:"Trigram operator: 'strict' (strict_word_similarity, <<%) or 'word' (word_similarity, <%)",default:"strict"},base:{type:"string",description:"Knowledge base name to use",default:"default"}},async run({args:e}){let t=e.trigramMode;if(t!=="strict"&&t!=="word")throw new Error(`Invalid --trigram-mode "${t}". Must be "strict" or "word".`);let n=await new T().getBaseByName(e.base);n||(m.error(`Base '${e.base}' does not exist.`),process.exit(1));let o=await L(),s=await Qe({vectorText:e.vector,queryText:e.fulltext,trigramText:e.trigram,embedQuery:o.embedQuery.bind(o),trigramMode:t,baseId:n.id});if(s.length===0){m.info("No matching chunks found.");return}for(let a of s){let u="";u+=`<file path="${a.filePath}">
16
+ `,u+=`<meta>
17
+ `,u+=`Chunk index: ${a.chunkIndex}
18
+ `,u+=`Score: ${Number(a.score).toFixed(3)}
19
+ `,a.breadcrumbs.length>0&&(u+=`Breadcrumbs: ${a.breadcrumbs.join(" > ")}
20
+ `),u+=`</meta>
21
+ `,u+=`<content>
22
+ `,u+=`${a.content}
23
+ `,u+=`</content>
24
+ `,u+=`</file>
25
+ `,console.log(u)}}});import{join as Yt}from"node:path";import{fileURLToPath as Zt}from"node:url";import{migrate as en}from"drizzle-orm/pglite/migrator";var tn="./drizzle",nn=Yt(Zt(new URL(".",import.meta.url)),tn);async function je(e){try{m.debug("Running DB migrations..."),await en(e,{migrationsFolder:nn}),m.debug("Migrations complete")}catch(t){throw new Error(`Migration failed: ${t instanceof Error?t.message:String(t)}`,{cause:t})}}var sn=rn({meta:{name:"notes-query-tool",version:q.version,description:q.description,alias:"nqt"},args:{verbose:{type:"boolean",description:"Enable verbose logging (sets log level to max)",default:!1},base:{type:"string",description:"Knowledge base name to use",default:"default"}},subCommands:{load:He,query:We,drop:be},async setup({args:e}){e.verbose&&he(999);let t=x();await t.$client.waitReady,await je(t)},async cleanup(){await x().$client.close()}});await on(sn).catch(e=>{H(`Error: ${e}`,1)});process.on("unhandledRejection",e=>{H(`Unhandled Rejection: ${e}`,1)});process.on("uncaughtException",e=>{H(`Uncaught Exception: ${e}`,1)});process.on("SIGINT",()=>{H("Received SIGINT, shutting down...",0)});function H(e,t){m.error(e),x().$client.close().finally(()=>process.exit(t))}
26
+ //# sourceMappingURL=main.js.map
package/dist/main.js.map ADDED
@@ -0,0 +1,6 @@
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+ {
2
+ "version": 3,
3
+ "sources": ["../src/main.ts", "../package.json", "../src/commands/drop.ts", "../src/database/base-repository.ts", "../src/database/client.ts", "../src/config.ts", "../src/database/schema/bases.ts", "../src/commands/load.ts", "../src/embedder.ts", "../src/logger.ts", "../src/files/chunker.ts", "../src/files/load-files.ts", "../src/commands/load/load-repository.ts", "../src/database/schema/chunks.ts", "../src/database/schema/files.ts", "../src/commands/load/process-file.ts", "../src/files/frontmatter.ts", "../src/commands/load/build-document-header.ts", "../src/commands/load/decide-file-processing.ts", "../src/commands/query.ts", "../src/query/execute.ts", "../src/query/scoring.ts", "../src/database/migrate.ts"],
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5
+ "names": ["defineCommand", "runMain", "package_default", "createInterface", "defineCommand", "eq", "PGlite", "pg_trgm", "unaccent", "vector", "drizzle", "homedir", "join", "MODEL_ID", "MODEL_DTYPE", "EMBEDDING_DIMS", "getDataDir", "xdg", "base", "DB_DATA_DIR", "CHUNK_LIMIT_CHARS", "VECTOR_LIMIT", "FTS_LIMIT", "TRIGRAM_LIMIT", "VECTOR_WEIGHT", "FTS_WEIGHT", "TRIGRAM_WEIGHT", "TRIGRAM_THRESHOLD", "LINK_BOOST", "LINK_BOOST_CAP", "LINK_SOURCE_TOP_N", "DB_EXTENSIONS", "unaccent", "vector", "pg_trgm", "createDbClient", "dataDir", "DB_DATA_DIR", "pglite", "PGlite", "drizzle", "_db", "getDb", "sql", "integer", "pgTable", "text", "timestamp", "basesTable", "DbBaseRepository", "db", "getDb", "name", "base", "basesTable", "eq", "existing", "created", "dropCommand", "defineCommand", "args", "baseRepo", "DbBaseRepository", "confirm", "prompt", "resolve", "rl", "createInterface", "answer", "createHash", "readFile", "defineCommand", "pipeline", "createConsola", "resolveLevel", "raw", "n", 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"remaining", "splitWordsThenChars", "breadcrumbBudgetSize", "assembleSlicesRaw", "slices", "regex", "lastEnd", "m", "budget", "avail", "wordRegex", "words", "first", "hardSlice", "cur", "curOffset", "w", "text", "size", "baseOffset", "i", "furtherSplit", "buf", "bufOffset", "emit", "finer", "f", "startOffset", "trimmed", "a", "breadcrumb", "prefix", "next", "sameBreadcrumb", "mergedBody", "b", "glob", "basename", "loadFilesByGlob", "globPattern", "entry", "f", "b", "and", "count", "eq", "sql", "sql", "customType", "index", "integer", "pgTable", "text", "timestamp", "vector", "sql", "integer", "jsonb", "pgTable", "text", "timestamp", "unique", "filesTable", "pgTable", "integer", "basesTable", "text", "jsonb", "timestamp", "sql", "table", "unique", "tsvector", "customType", "chunksTable", "pgTable", "integer", "filesTable", "text", "vector", "EMBEDDING_DIMS", "timestamp", "sql", "table", "index", "DbLoadRepository", "db", "getDb", "filePath", "baseId", "file", "filesTable", "and", "eq", "chunkResult", "count", "sql", "chunksTable", "total", "withEmbedding", "hasStoredChunksWithEmbeddings", "contentHash", "title", "_updatedAt", "attributes", "fileId", "chunks", "tx", "newChunks", "chunk", "path", "parseYaml", "FRONTMATTER_RE", "extractFrontmatter", "content", "match", "parsed", "normalizeTitle", "value", "title", "normalizeStringList", "item", "normalized", "normalizeDocumentMetadata", "attributes", "buildDocumentHeader", "basename", "parentDir", "headerLines", "metadata", "headerPrefix", "titleParts", "titleString", "decideFileProcessing", "nextContentHash", "existing", "processLoadedFile", "filePath", "deps", "repo", "baseId", "readText", "hashContent", "chunkMarkdown", "embedDocument", "content", "contentHash", "existingState", "decision", "decideFileProcessing", "logger", "attributes", "body", "extractFrontmatter", "basename", "path", "parentDir", "headerPrefix", "titleString", "buildDocumentHeader", "chunks", "CHUNK_LIMIT_CHARS", "fileId", "chunkDocs", "chunk", "i", "augmented", "bodyText", "embedding", "loadCommand", "defineCommand", "args", "start", "logger", "filesSeen", "filesSkipped", "filesProcessed", "chunksProduced", "repo", "DbLoadRepository", "base", "DbBaseRepository", "embedder", "getEmbedDocument", "body", "title", "initEmbedder", "filePaths", "results", "filePath", "loadFilesByGlob", "result", "processLoadedFile", "p", "readFile", "content", "createHash", "chunkMarkdown", "defineCommand", "and", "cosineDistance", "desc", "eq", "gt", "sql", "path", "fuseScores", "vectorResults", "ftsResults", "trigramResults", "weights", "logger", "maxSimilarity", "r", "maxRank", "maxTrigram", "merged", "ftsScore", "existing", "tgScore", "extractWikilinks", "content", "re", "seen", "m", "rerankByWikilinks", "allFilePaths", "topN", "LINK_SOURCE_TOP_N", "linkBoost", "LINK_BOOST", "linkBoostCap", "LINK_BOOST_CAP", "basenameToFilePaths", "fp", "base", "path", "filePathsInResults", "topSources", "a", "b", "boosts", "src", "links", "link", "targets", "prev", "boost", "result", "id", "chunk", "poolByFile", "topK", "byFile", "executeQuery", "opts", "vectorText", "queryText", "trigramText", "embedQuery", "db", "getDb", "baseId", "weights", "VECTOR_WEIGHT", "FTS_WEIGHT", "TRIGRAM_WEIGHT", "limits", "VECTOR_LIMIT", "FTS_LIMIT", "TRIGRAM_LIMIT", "trigramThreshold", "TRIGRAM_THRESHOLD", "trigramMode", "topK", "queryVector", "effectiveTrigramText", "logger", "similarity", "sql", "cosineDistance", "chunksTable", "trigramFn", "trigramOp", "trigramScore", "vectorResults", "ftsResults", "trigramResults", "filesTable", "eq", "and", "gt", "desc", "tx", "allFiles", "fused", "fuseScores", "reranked", "rerankByWikilinks", "f", "results", "poolByFile", "queryCommand", "defineCommand", "args", "mode", "base", "DbBaseRepository", "logger", "embedder", "initEmbedder", "results", "executeQuery", "row", "output", "join", "fileURLToPath", "migrate", "migrationsRelativePath", "migrationsFolder", "join", "fileURLToPath", "runMigrations", "db", "logger", "migrate", "err", "main", "defineCommand", "package_default", "loadCommand", "queryCommand", "dropCommand", "args", "setLogLevel", "db", "getDb", "runMigrations", "runMain", "error", "closeDbAndExit", "reason", "message", "code", "logger"]
6
+ }
package/package.json ADDED
@@ -0,0 +1,61 @@
1
+ {
2
+ "name": "@tichopad/notes-query-tool",
3
+ "type": "module",
4
+ "version": "0.1.0",
5
+ "description": "CLI tool for indexing and querying Markdown notes",
6
+ "engines": {
7
+ "node": ">=24"
8
+ },
9
+ "packageManager": "pnpm@10.32.1",
10
+ "main": "dist/main.js",
11
+ "bin": {
12
+ "nqt": "dist/main.js"
13
+ },
14
+ "files": [
15
+ "dist"
16
+ ],
17
+ "scripts": {
18
+ "db:delete-stale-lock": "rm ./dbdata/postmaster.pid",
19
+ "db:generate": "drizzle-kit generate",
20
+ "db:query": "node scripts/query.ts",
21
+ "db:push": "drizzle-kit push",
22
+ "db:studio": "drizzle-kit studio",
23
+ "benchdata:load": "pnpm run dev load --glob 'benchdata/**/*.md'",
24
+ "benchdata:reindex": "rm -rf dbdata && pnpm run benchdata:load",
25
+ "testdata:load": "pnpm run dev load --glob 'testdata/**/*.md'",
26
+ "testdata:reindex": "rm -rf dbdata && pnpm run testdata:load",
27
+ "dev": "node src/main.ts",
28
+ "build": "node scripts/build.ts",
29
+ "test": "node --test --test-reporter=spec 'src/**/*.test.ts'",
30
+ "bench": "node --test --test-reporter=spec 'bench/**/*.test.ts'",
31
+ "check": "biome check . && tsc --noEmit && pnpm run test",
32
+ "fix": "biome check --write ."
33
+ },
34
+ "dependencies": {
35
+ "@electric-sql/pglite": "0.4.4",
36
+ "@huggingface/transformers": "4.1.0",
37
+ "citty": "0.2.2",
38
+ "consola": "3.4.2",
39
+ "drizzle-orm": "0.45.2",
40
+ "marked": "18.0.1",
41
+ "yaml": "2.8.3"
42
+ },
43
+ "devDependencies": {
44
+ "@biomejs/biome": "2.4.12",
45
+ "@types/node": "24.12.2",
46
+ "drizzle-kit": "0.31.10",
47
+ "esbuild": "0.28.0",
48
+ "typescript": "6.0.2"
49
+ },
50
+ "pnpm": {
51
+ "onlyBuiltDependencies": [
52
+ "esbuild",
53
+ "onnxruntime-node",
54
+ "protobufjs",
55
+ "sharp"
56
+ ],
57
+ "patchedDependencies": {
58
+ "drizzle-kit@0.31.10": "patches/drizzle-kit@0.31.10.patch"
59
+ }
60
+ }
61
+ }