npm - @thinkingpatterns/cli - Versions diffs - 0.2.1 → 0.2.2 - Mend

@thinkingpatterns/cli 0.2.1 → 0.2.2

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Files changed (3) hide show

package/dist/index.js CHANGED Viewed

@@ -338,16 +338,26 @@ function registerRunCommands(program2) {
 import { readFileSync as readFileSync3 } from "fs";
 function registerIngestCommands(program2) {
   const ingest = program2.command("ingest").description("Ingest scan results");
-  ingest.command("sarif").description("Ingest a SARIF file").option("-p, --project <id>", "Project ID").option("-b, --branch <name>", "Branch name for scoping findings").requiredOption("--file <path>", "Path to SARIF file").action(async (opts) => {
+  ingest.command("sarif").description("Ingest a SARIF file").option("-p, --project <id>", "Project ID").option("-b, --branch <name>", "Branch name for scoping findings").option("--run-id <id>", "Associate with an existing run (skips auto-run creation)").requiredOption("--file <path>", "Path to SARIF file").action(async (opts) => {
     try {
       const projectId = resolveProjectId(opts.project);
       const content = readFileSync3(opts.file, "utf-8");
-      const result = await getClient().ingestSarifChunked(
-        projectId,
-        content,
-        opts.branch
-      );
-      printJson(result);
+      if (opts.runId) {
+        const result = await getClient().ingestSarif(
+          projectId,
+          content,
+          opts.branch,
+          opts.runId
+        );
+        printJson(result);
+      } else {
+        const result = await getClient().ingestSarifChunked(
+          projectId,
+          content,
+          opts.branch
+        );
+        printJson(result);
+      }
     } catch (err) {
       printError(err);
     }
@@ -394,7 +404,7 @@ function registerAgentCommands(program2) {
       printError(err);
     }
   });
-  agents.command("run <id>").description("Run an agent against a project").option("-p, --project <id>", "Project ID").action(async (id, opts) => {
+  agents.command("run <id>").description("Run an agent against a project").option("-p, --project <id>", "Project ID").option("-b, --branch <name>", "Branch name").action(async (id, opts) => {
     try {
       const projectId = resolveProjectId(opts.project);
       const client = getClient();
@@ -408,11 +418,21 @@ function registerAgentCommands(program2) {
 `);
         process.exit(3);
       }
+      const branch = opts.branch ?? project.default_branch ?? "main";
+      const run = await client.createRun({
+        project_id: projectId,
+        agent_definition_id: agent.slug,
+        trigger_type: "mcp",
+        scope_type: "full",
+        branch
+      });
+      await client.updateRunStatus(run.id, "running");
       printJson({
         agent: { id: agent.id, name: agent.name, slug: agent.slug },
         project: { id: project.id, name: project.name },
+        run: { id: run.id, status: "running" },
         skill_md: agent.skill_md,
-        instruction: "Follow the SKILL.md workflow above. When done, ingest results with: tp ingest sarif --project " + projectId + " --file results.sarif"
+        instruction: "Follow the SKILL.md workflow above. When done, ingest results with: tp ingest sarif --project " + projectId + " --run-id " + run.id + " --file results.sarif --branch " + branch
       });
     } catch (err) {
       printError(err);

package/dist/index.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"sources":["../src/index.ts","../src/lib/client.ts","../src/lib/credentials.ts","../src/commands/login.ts","../src/lib/output.ts","../src/commands/auth.ts","../src/commands/projects.ts","../src/lib/config.ts","../src/commands/findings.ts","../src/commands/metrics.ts","../src/commands/risk-modules.ts","../src/commands/runs.ts","../src/commands/ingest.ts","../src/commands/agents.ts"],"sourcesContent":["import { Command } from \"commander\";\nimport { setGlobalOpts, resolveApiKey } from \"./lib/client.js\";\nimport { registerLoginCommands } from \"./commands/login.js\";\nimport { registerAuthCommands } from \"./commands/auth.js\";\nimport { registerProjectCommands } from \"./commands/projects.js\";\nimport { registerFindingCommands } from \"./commands/findings.js\";\nimport { registerMetricsCommands } from \"./commands/metrics.js\";\nimport { registerRiskModulesCommands } from \"./commands/risk-modules.js\";\nimport { registerRunCommands } from \"./commands/runs.js\";\nimport { registerIngestCommands } from \"./commands/ingest.js\";\nimport { registerAgentCommands } from \"./commands/agents.js\";\n\n/** Commands that work without authentication. /\nconst NO_AUTH_COMMANDS = new Set([\"login\", \"logout\", \"help\"]);\n\nconst program = new Command();\n\nprogram\n .name(\"tp\")\n .description(\"ThinkingPatterns CLI — security findings management\")\n .version(\"0.1.0\")\n .option(\"--api-key <key>\", \"API key (overrides TP_API_KEY env)\")\n .option(\"--api-url <url>\", \"API URL (overrides TP_API_URL env)\")\n .option(\"--quiet\", \"Suppress non-data output\")\n .hook(\"preAction\", (thisCommand) => {\n const commandName = thisCommand.args?.[0] ?? thisCommand.name();\n if (NO_AUTH_COMMANDS.has(commandName)) return;\n\n const opts = program.opts();\n setGlobalOpts({ apiKey: opts.apiKey, apiUrl: opts.apiUrl });\n\n if (!resolveApiKey()) {\n process.stderr.write(\n \"Error: Not authenticated. Run `tp login` or set TP_API_KEY.\\n\"\n );\n process.exit(2);\n }\n });\n\nregisterLoginCommands(program);\nregisterAuthCommands(program);\nregisterProjectCommands(program);\nregisterFindingCommands(program);\nregisterMetricsCommands(program);\nregisterRiskModulesCommands(program);\nregisterRunCommands(program);\nregisterIngestCommands(program);\nregisterAgentCommands(program);\n\nprogram.parse();\n","import { ThinkingPatternsClient } from \"@thinkingpatterns/core\";\nimport { loadCredentials } from \"./credentials.js\";\n\nconst DEFAULT_API_URL = \"https://thinkingpatterns.ai\";\n\nlet _client: ThinkingPatternsClient \| null = null;\nlet _opts: { apiKey?: string; apiUrl?: string } = {};\n\n/* Call once from index.ts to pass through global CLI options. /\nexport function setGlobalOpts(opts: { apiKey?: string; apiUrl?: string }): void {\n _opts = opts;\n _client = null; // reset if options change\n}\n\n/\n Resolve the API key from (in priority order):\n * 1. --api-key flag\n * 2. TP_API_KEY env var\n * 3. ~/.thinkingpatterns/credentials.json (saved by `tp login`)\n /\nexport function resolveApiKey(): string \| undefined {\n if (_opts.apiKey) return _opts.apiKey;\n if (process.env.TP_API_KEY) return process.env.TP_API_KEY;\n return loadCredentials()?.api_key;\n}\n\n/* Resolve the API URL from flag, env, saved credentials, or default. /\nfunction resolveApiUrl(): string {\n return _opts.apiUrl \|\| process.env.TP_API_URL \|\| loadCredentials()?.api_url \|\| DEFAULT_API_URL;\n}\n\n/* Get the shared client instance (created lazily). /\nexport function getClient(): ThinkingPatternsClient {\n if (!_client) {\n const apiKey = resolveApiKey() \|\| \"\";\n const apiUrl = resolveApiUrl();\n _client = new ThinkingPatternsClient({ apiKey, apiUrl });\n }\n return _client;\n}\n","import { readFileSync, writeFileSync, mkdirSync, rmSync, existsSync } from \"node:fs\";\nimport { join } from \"node:path\";\nimport { homedir } from \"node:os\";\n\nconst CONFIG_DIR = join(homedir(), \".thinkingpatterns\");\nconst CREDENTIALS_FILE = join(CONFIG_DIR, \"credentials.json\");\n\ninterface StoredCredentials {\n api_key: string;\n api_url?: string;\n}\n\n/* Read persisted credentials, or null if none saved. /\nexport function loadCredentials(): StoredCredentials \| null {\n if (!existsSync(CREDENTIALS_FILE)) return null;\n try {\n const content = readFileSync(CREDENTIALS_FILE, \"utf-8\");\n return JSON.parse(content) as StoredCredentials;\n } catch {\n return null;\n }\n}\n\n/* Persist credentials to ~/.thinkingpatterns/credentials.json. /\nexport function saveCredentials(apiKey: string, apiUrl?: string): void {\n mkdirSync(CONFIG_DIR, { recursive: true, mode: 0o700 });\n const data: StoredCredentials = { api_key: apiKey };\n if (apiUrl) data.api_url = apiUrl;\n writeFileSync(CREDENTIALS_FILE, JSON.stringify(data, null, 2) + \"\\n\", {\n mode: 0o600,\n });\n}\n\n/* Remove persisted credentials. Returns true if a file was deleted. /\nexport function clearCredentials(): boolean {\n if (!existsSync(CREDENTIALS_FILE)) return false;\n rmSync(CREDENTIALS_FILE);\n return true;\n}\n","import type { Command } from \"commander\";\nimport { createInterface } from \"node:readline\";\nimport { ThinkingPatternsClient } from \"@thinkingpatterns/core\";\nimport { saveCredentials, clearCredentials, loadCredentials } from \"../lib/credentials.js\";\n\nconst DEFAULT_API_URL = \"https://thinkingpatterns.ai\";\n\nfunction prompt(question: string): Promise<string> {\n const rl = createInterface({ input: process.stdin, output: process.stderr });\n return new Promise((resolve) => {\n rl.question(question, (answer) => {\n rl.close();\n resolve(answer.trim());\n });\n });\n}\n\nexport function registerLoginCommands(program: Command): void {\n program\n .command(\"login\")\n .description(\"Authenticate and save credentials\")\n .option(\"--api-url <url>\", \"API URL (default: https://thinkingpatterns.ai)\")\n .action(async (opts) => {\n const apiUrl = opts.apiUrl \|\| DEFAULT_API_URL;\n\n process.stderr.write(\n `\\nPaste your API key from ${apiUrl}/settings/api-keys\\n\\n`\n );\n\n const apiKey = await prompt(\"API key: \");\n if (!apiKey) {\n process.stderr.write(\"Aborted — no key provided.\\n\");\n process.exit(1);\n }\n\n // Validate the key\n process.stderr.write(\"Verifying...\");\n try {\n const client = new ThinkingPatternsClient({ apiKey, apiUrl });\n const me = await client.whoami();\n saveCredentials(apiKey, apiUrl !== DEFAULT_API_URL ? apiUrl : undefined);\n const identity = me.profile?.email ?? me.profile?.display_name ?? me.org?.name ?? \"authenticated user\";\n process.stderr.write(\n ` logged in as ${identity}.\\n\\n` +\n `Credentials saved to ~/.thinkingpatterns/credentials.json\\n`\n );\n } catch {\n process.stderr.write(\" failed.\\n\\nError: Invalid API key.\\n\");\n process.exit(2);\n }\n });\n\n program\n .command(\"logout\")\n .description(\"Remove saved credentials\")\n .action(() => {\n const had = loadCredentials();\n clearCredentials();\n if (had) {\n process.stderr.write(\"Credentials removed.\\n\");\n } else {\n process.stderr.write(\"No saved credentials found.\\n\");\n }\n });\n}\n","import { TPError, TPAuthError, TPNotFoundError } from \"@thinkingpatterns/core\";\n\n/ ─── Exit codes ─── /\n\nexport const EXIT_OK = 0;\nexport const EXIT_CLIENT_ERROR = 1;\nexport const EXIT_AUTH_ERROR = 2;\nexport const EXIT_NOT_FOUND = 3;\nexport const EXIT_UNEXPECTED = 10;\n\n/ ─── Output helpers ─── /\n\nexport function printJson(data: unknown): void {\n process.stdout.write(JSON.stringify(data, null, 2) + \"\\n\");\n}\n\nexport function printError(err: unknown): never {\n if (err instanceof TPAuthError) {\n process.stderr.write(`Error: ${err.message}\\nHint: Run \\`tp login\\` or check your --api-key value.\\n`);\n process.exit(EXIT_AUTH_ERROR);\n }\n if (err instanceof TPNotFoundError) {\n process.stderr.write(`Error: ${err.message}\\n`);\n process.exit(EXIT_NOT_FOUND);\n }\n if (err instanceof TPError) {\n process.stderr.write(`Error: ${err.message}\\n`);\n if (err.details) {\n process.stderr.write(`Details: ${JSON.stringify(err.details, null, 2)}\\n`);\n }\n process.exit(EXIT_CLIENT_ERROR);\n }\n if (err instanceof Error) {\n process.stderr.write(`Error: ${err.message}\\n`);\n } else {\n process.stderr.write(`Error: ${String(err)}\\n`);\n }\n process.exit(EXIT_UNEXPECTED);\n}\n","import type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\n\nexport function registerAuthCommands(program: Command): void {\n program\n .command(\"whoami\")\n .description(\"Show current authentication context\")\n .action(async () => {\n try {\n const result = await getClient().whoami();\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\n\nexport function registerProjectCommands(program: Command): void {\n const projects = program\n .command(\"projects\")\n .description(\"Manage projects\");\n\n projects\n .command(\"list\")\n .description(\"List all projects\")\n .action(async () => {\n try {\n const result = await getClient().listProjects();\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import { readFileSync, existsSync } from \"node:fs\";\nimport { join, dirname } from \"node:path\";\n\nconst CONFIG_FILE = \".thinkingpatterns.json\";\n\ninterface ProjectConfig {\n project_id?: string;\n}\n\n/\n Walk up from cwd looking for .thinkingpatterns.json.\n * Returns the parsed config or null if not found.\n /\nexport function loadProjectConfig(): ProjectConfig \| null {\n let dir = process.cwd();\n const root = dirname(dir) === dir ? dir : \"/\";\n\n while (true) {\n const filePath = join(dir, CONFIG_FILE);\n if (existsSync(filePath)) {\n try {\n const content = readFileSync(filePath, \"utf-8\");\n return JSON.parse(content) as ProjectConfig;\n } catch {\n return null;\n }\n }\n const parent = dirname(dir);\n if (parent === dir \|\| dir === root) break;\n dir = parent;\n }\n return null;\n}\n\n/\n Resolve project ID from explicit option, falling back to config file.\n * Exits with error if neither is available.\n */\nexport function resolveProjectId(explicit?: string): string {\n if (explicit) return explicit;\n const config = loadProjectConfig();\n if (config?.project_id) return config.project_id;\n process.stderr.write(\n \"Error: --project is required (or set project_id in .thinkingpatterns.json)\\n\"\n );\n process.exit(1);\n}\n","import type { Command } from \"commander\";\nimport type { TriageAction } from \"@thinkingpatterns/core\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerFindingCommands(program: Command): void {\n const findings = program\n .command(\"findings\")\n .description(\"Manage security findings\");\n\n findings\n .command(\"list\")\n .description(\"List findings for a project\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .option(\"--severity <severity>\", \"Filter by severity, comma-separated (critical,high,medium,low,info)\")\n .option(\"--status <status>\", \"Filter by status, comma-separated (open,triaged,completed,dismissed)\")\n .option(\"--category <category>\", \"Filter by category\")\n .option(\"--source-tool <tool>\", \"Filter by source tool\")\n .option(\"--module-path <path>\", \"Filter by module path prefix\")\n .option(\"--branch <branch>\", \"Filter by branch\")\n .option(\"--limit <n>\", \"Max results\", parseInt)\n .option(\"--offset <n>\", \"Result offset\", parseInt)\n .option(\"--verbose\", \"Show all fields (default: summary only)\")\n .action(async (opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const result = await getClient().listFindings({\n project_id: projectId,\n severity: opts.severity?.includes(\",\") ? opts.severity.split(\",\").map((s: string) => s.trim()) : opts.severity,\n status: opts.status?.includes(\",\") ? opts.status.split(\",\").map((s: string) => s.trim()) : opts.status,\n category: opts.category,\n source_tool: opts.sourceTool,\n module_path: opts.modulePath,\n branch: opts.branch,\n limit: opts.limit,\n offset: opts.offset,\n });\n if (!opts.verbose) {\n result.data = result.data.map((f: Record<string, unknown>) => ({\n id: f.id,\n title: f.title,\n severity: f.severity,\n status: f.status,\n category: f.category,\n code_location_file: f.code_location_file,\n code_location_line_start: f.code_location_line_start,\n first_seen_at: f.first_seen_at,\n }));\n }\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n findings\n .command(\"get <id>\")\n .description(\"Get finding details\")\n .action(async (id: string) => {\n try {\n const result = await getClient().getFinding(id);\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n findings\n .command(\"triage <id>\")\n .description(\"Triage a finding\")\n .requiredOption(\"--action <action>\", \"Triage action (accept\|dismiss\|defer\|complete\|reopen)\")\n .option(\"--reason <reason>\", \"Reason for the triage decision\")\n .action(async (id: string, opts) => {\n try {\n const result = await getClient().triageFinding(\n id,\n opts.action as TriageAction,\n opts.reason\n );\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n findings\n .command(\"bulk-triage\")\n .description(\"Triage multiple findings at once\")\n .requiredOption(\"--ids <ids>\", \"Comma-separated finding IDs\")\n .requiredOption(\"--action <action>\", \"Triage action (accept\|dismiss\|defer\|complete\|reopen)\")\n .option(\"--reason <reason>\", \"Reason for the triage decision\")\n .action(async (opts) => {\n try {\n const findingIds = opts.ids.split(\",\").map((s: string) => s.trim());\n const result = await getClient().bulkTriage({\n finding_ids: findingIds,\n action: opts.action as TriageAction,\n reason: opts.reason,\n });\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n findings\n .command(\"comment <id>\")\n .description(\"Add a comment to a finding\")\n .requiredOption(\"--body <text>\", \"Comment text\")\n .action(async (id: string, opts) => {\n try {\n const result = await getClient().addComment(id, opts.body);\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerMetricsCommands(program: Command): void {\n program\n .command(\"metrics\")\n .description(\"Get project metrics (MTTR, fix rate, open count)\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .action(async (opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const result = await getClient().getProjectMetrics(projectId);\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerRiskModulesCommands(program: Command): void {\n program\n .command(\"risk-modules\")\n .description(\"Get top risk modules for a project\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .option(\"--limit <n>\", \"Max results\", parseInt)\n .action(async (opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const result = await getClient().getTopRiskModules(projectId, opts.limit);\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerRunCommands(program: Command): void {\n const runs = program\n .command(\"runs\")\n .description(\"Manage scan runs\");\n\n runs\n .command(\"list\")\n .description(\"List runs for a project\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .option(\"--status <status>\", \"Filter by status\")\n .option(\"--limit <n>\", \"Max results\", parseInt)\n .option(\"--offset <n>\", \"Result offset\", parseInt)\n .action(async (opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const result = await getClient().listRuns(projectId, {\n status: opts.status,\n limit: opts.limit,\n offset: opts.offset,\n });\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import { readFileSync } from \"node:fs\";\nimport type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerIngestCommands(program: Command): void {\n const ingest = program\n .command(\"ingest\")\n .description(\"Ingest scan results\");\n\n ingest\n .command(\"sarif\")\n .description(\"Ingest a SARIF file\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .option(\"-b, --branch <name>\", \"Branch name for scoping findings\")\n .requiredOption(\"--file <path>\", \"Path to SARIF file\")\n .action(async (opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const content = readFileSync(opts.file, \"utf-8\");\n const result = await getClient().ingestSarifChunked(\n projectId,\n content,\n opts.branch\n );\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import { readFileSync } from \"node:fs\";\nimport type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerAgentCommands(program: Command): void {\n const agents = program\n .command(\"agents\")\n .description(\"Manage analysis agents\");\n\n agents\n .command(\"list\")\n .description(\"List available agents\")\n .option(\"--category <category>\", \"Filter by category\")\n .option(\"--status <status>\", \"Filter by status (draft\|active\|archived)\")\n .option(\"--limit <n>\", \"Max results\", parseInt)\n .option(\"--offset <n>\", \"Result offset\", parseInt)\n .action(async (opts) => {\n try {\n const result = await getClient().listAgents({\n category: opts.category,\n status: opts.status,\n limit: opts.limit,\n offset: opts.offset,\n });\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n agents\n .command(\"get <id>\")\n .description(\"Get agent details\")\n .action(async (id: string) => {\n try {\n const result = await getClient().getAgent(id);\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n agents\n .command(\"create\")\n .description(\"Create a new agent\")\n .requiredOption(\"--name <name>\", \"Agent name\")\n .requiredOption(\"--slug <slug>\", \"Agent slug (URL-safe identifier)\")\n .requiredOption(\"--skill-md <path>\", \"Path to SKILL.md file\")\n .option(\"--description <desc>\", \"Agent description\")\n .option(\"--category <category>\", \"Agent category\")\n .action(async (opts) => {\n try {\n const skillMd = readFileSync(opts.skillMd, \"utf-8\");\n const result = await getClient().createAgent({\n name: opts.name,\n slug: opts.slug,\n skill_md: skillMd,\n description: opts.description,\n category: opts.category,\n });\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n agents\n .command(\"run <id>\")\n .description(\"Run an agent against a project\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .action(async (id: string, opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const client = getClient();\n const [agent, projects] = await Promise.all([\n client.getAgent(id),\n client.listProjects(),\n ]);\n const project = projects.find((p) => p.id === projectId);\n if (!project) {\n process.stderr.write(`Error: Project ${projectId} not found\\n`);\n process.exit(3);\n }\n printJson({\n agent: { id: agent.id, name: agent.name, slug: agent.slug },\n project: { id: project.id, name: project.name },\n skill_md: agent.skill_md,\n instruction:\n \"Follow the SKILL.md workflow above. When done, ingest results with: tp ingest sarif --project \" +\n projectId +\n \" --file results.sarif\",\n });\n } catch (err) {\n printError(err);\n }\n 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1	+ {"version":3,"sources":["../src/index.ts","../src/lib/client.ts","../src/lib/credentials.ts","../src/commands/login.ts","../src/lib/output.ts","../src/commands/auth.ts","../src/commands/projects.ts","../src/lib/config.ts","../src/commands/findings.ts","../src/commands/metrics.ts","../src/commands/risk-modules.ts","../src/commands/runs.ts","../src/commands/ingest.ts","../src/commands/agents.ts"],"sourcesContent":["import { Command } from \"commander\";\nimport { setGlobalOpts, resolveApiKey } from \"./lib/client.js\";\nimport { registerLoginCommands } from \"./commands/login.js\";\nimport { registerAuthCommands } from \"./commands/auth.js\";\nimport { registerProjectCommands } from \"./commands/projects.js\";\nimport { registerFindingCommands } from \"./commands/findings.js\";\nimport { registerMetricsCommands } from \"./commands/metrics.js\";\nimport { registerRiskModulesCommands } from \"./commands/risk-modules.js\";\nimport { registerRunCommands } from \"./commands/runs.js\";\nimport { registerIngestCommands } from \"./commands/ingest.js\";\nimport { registerAgentCommands } from \"./commands/agents.js\";\n\n/** Commands that work without authentication. /\nconst NO_AUTH_COMMANDS = new Set([\"login\", \"logout\", \"help\"]);\n\nconst program = new Command();\n\nprogram\n .name(\"tp\")\n .description(\"ThinkingPatterns CLI — security findings management\")\n .version(\"0.1.0\")\n .option(\"--api-key <key>\", \"API key (overrides TP_API_KEY env)\")\n .option(\"--api-url <url>\", \"API URL (overrides TP_API_URL env)\")\n .option(\"--quiet\", \"Suppress non-data output\")\n .hook(\"preAction\", (thisCommand) => {\n const commandName = thisCommand.args?.[0] ?? thisCommand.name();\n if (NO_AUTH_COMMANDS.has(commandName)) return;\n\n const opts = program.opts();\n setGlobalOpts({ apiKey: opts.apiKey, apiUrl: opts.apiUrl });\n\n if (!resolveApiKey()) {\n process.stderr.write(\n \"Error: Not authenticated. Run `tp login` or set TP_API_KEY.\\n\"\n );\n process.exit(2);\n }\n });\n\nregisterLoginCommands(program);\nregisterAuthCommands(program);\nregisterProjectCommands(program);\nregisterFindingCommands(program);\nregisterMetricsCommands(program);\nregisterRiskModulesCommands(program);\nregisterRunCommands(program);\nregisterIngestCommands(program);\nregisterAgentCommands(program);\n\nprogram.parse();\n","import { ThinkingPatternsClient } from \"@thinkingpatterns/core\";\nimport { loadCredentials } from \"./credentials.js\";\n\nconst DEFAULT_API_URL = \"https://thinkingpatterns.ai\";\n\nlet _client: ThinkingPatternsClient \| null = null;\nlet _opts: { apiKey?: string; apiUrl?: string } = {};\n\n/* Call once from index.ts to pass through global CLI options. /\nexport function setGlobalOpts(opts: { apiKey?: string; apiUrl?: string }): void {\n _opts = opts;\n _client = null; // reset if options change\n}\n\n/\n Resolve the API key from (in priority order):\n * 1. --api-key flag\n * 2. TP_API_KEY env var\n * 3. ~/.thinkingpatterns/credentials.json (saved by `tp login`)\n /\nexport function resolveApiKey(): string \| undefined {\n if (_opts.apiKey) return _opts.apiKey;\n if (process.env.TP_API_KEY) return process.env.TP_API_KEY;\n return loadCredentials()?.api_key;\n}\n\n/* Resolve the API URL from flag, env, saved credentials, or default. /\nfunction resolveApiUrl(): string {\n return _opts.apiUrl \|\| process.env.TP_API_URL \|\| loadCredentials()?.api_url \|\| DEFAULT_API_URL;\n}\n\n/* Get the shared client instance (created lazily). /\nexport function getClient(): ThinkingPatternsClient {\n if (!_client) {\n const apiKey = resolveApiKey() \|\| \"\";\n const apiUrl = resolveApiUrl();\n _client = new ThinkingPatternsClient({ apiKey, apiUrl });\n }\n return _client;\n}\n","import { readFileSync, writeFileSync, mkdirSync, rmSync, existsSync } from \"node:fs\";\nimport { join } from \"node:path\";\nimport { homedir } from \"node:os\";\n\nconst CONFIG_DIR = join(homedir(), \".thinkingpatterns\");\nconst CREDENTIALS_FILE = join(CONFIG_DIR, \"credentials.json\");\n\ninterface StoredCredentials {\n api_key: string;\n api_url?: string;\n}\n\n/* Read persisted credentials, or null if none saved. /\nexport function loadCredentials(): StoredCredentials \| null {\n if (!existsSync(CREDENTIALS_FILE)) return null;\n try {\n const content = readFileSync(CREDENTIALS_FILE, \"utf-8\");\n return JSON.parse(content) as StoredCredentials;\n } catch {\n return null;\n }\n}\n\n/* Persist credentials to ~/.thinkingpatterns/credentials.json. /\nexport function saveCredentials(apiKey: string, apiUrl?: string): void {\n mkdirSync(CONFIG_DIR, { recursive: true, mode: 0o700 });\n const data: StoredCredentials = { api_key: apiKey };\n if (apiUrl) data.api_url = apiUrl;\n writeFileSync(CREDENTIALS_FILE, JSON.stringify(data, null, 2) + \"\\n\", {\n mode: 0o600,\n });\n}\n\n/* Remove persisted credentials. Returns true if a file was deleted. /\nexport function clearCredentials(): boolean {\n if (!existsSync(CREDENTIALS_FILE)) return false;\n rmSync(CREDENTIALS_FILE);\n return true;\n}\n","import type { Command } from \"commander\";\nimport { createInterface } from \"node:readline\";\nimport { ThinkingPatternsClient } from \"@thinkingpatterns/core\";\nimport { saveCredentials, clearCredentials, loadCredentials } from \"../lib/credentials.js\";\n\nconst DEFAULT_API_URL = \"https://thinkingpatterns.ai\";\n\nfunction prompt(question: string): Promise<string> {\n const rl = createInterface({ input: process.stdin, output: process.stderr });\n return new Promise((resolve) => {\n rl.question(question, (answer) => {\n rl.close();\n resolve(answer.trim());\n });\n });\n}\n\nexport function registerLoginCommands(program: Command): void {\n program\n .command(\"login\")\n .description(\"Authenticate and save credentials\")\n .option(\"--api-url <url>\", \"API URL (default: https://thinkingpatterns.ai)\")\n .action(async (opts) => {\n const apiUrl = opts.apiUrl \|\| DEFAULT_API_URL;\n\n process.stderr.write(\n `\\nPaste your API key from ${apiUrl}/settings/api-keys\\n\\n`\n );\n\n const apiKey = await prompt(\"API key: \");\n if (!apiKey) {\n process.stderr.write(\"Aborted — no key provided.\\n\");\n process.exit(1);\n }\n\n // Validate the key\n process.stderr.write(\"Verifying...\");\n try {\n const client = new ThinkingPatternsClient({ apiKey, apiUrl });\n const me = await client.whoami();\n saveCredentials(apiKey, apiUrl !== DEFAULT_API_URL ? apiUrl : undefined);\n const identity = me.profile?.email ?? me.profile?.display_name ?? me.org?.name ?? \"authenticated user\";\n process.stderr.write(\n ` logged in as ${identity}.\\n\\n` +\n `Credentials saved to ~/.thinkingpatterns/credentials.json\\n`\n );\n } catch {\n process.stderr.write(\" failed.\\n\\nError: Invalid API key.\\n\");\n process.exit(2);\n }\n });\n\n program\n .command(\"logout\")\n .description(\"Remove saved credentials\")\n .action(() => {\n const had = loadCredentials();\n clearCredentials();\n if (had) {\n process.stderr.write(\"Credentials removed.\\n\");\n } else {\n process.stderr.write(\"No saved credentials found.\\n\");\n }\n });\n}\n","import { TPError, TPAuthError, TPNotFoundError } from \"@thinkingpatterns/core\";\n\n/ ─── Exit codes ─── /\n\nexport const EXIT_OK = 0;\nexport const EXIT_CLIENT_ERROR = 1;\nexport const EXIT_AUTH_ERROR = 2;\nexport const EXIT_NOT_FOUND = 3;\nexport const EXIT_UNEXPECTED = 10;\n\n/ ─── Output helpers ─── /\n\nexport function printJson(data: unknown): void {\n process.stdout.write(JSON.stringify(data, null, 2) + \"\\n\");\n}\n\nexport function printError(err: unknown): never {\n if (err instanceof TPAuthError) {\n process.stderr.write(`Error: ${err.message}\\nHint: Run \\`tp login\\` or check your --api-key value.\\n`);\n process.exit(EXIT_AUTH_ERROR);\n }\n if (err instanceof TPNotFoundError) {\n process.stderr.write(`Error: ${err.message}\\n`);\n process.exit(EXIT_NOT_FOUND);\n }\n if (err instanceof TPError) {\n process.stderr.write(`Error: ${err.message}\\n`);\n if (err.details) {\n process.stderr.write(`Details: ${JSON.stringify(err.details, null, 2)}\\n`);\n }\n process.exit(EXIT_CLIENT_ERROR);\n }\n if (err instanceof Error) {\n process.stderr.write(`Error: ${err.message}\\n`);\n } else {\n process.stderr.write(`Error: ${String(err)}\\n`);\n }\n process.exit(EXIT_UNEXPECTED);\n}\n","import type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\n\nexport function registerAuthCommands(program: Command): void {\n program\n .command(\"whoami\")\n .description(\"Show current authentication context\")\n .action(async () => {\n try {\n const result = await getClient().whoami();\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\n\nexport function registerProjectCommands(program: Command): void {\n const projects = program\n .command(\"projects\")\n .description(\"Manage projects\");\n\n projects\n .command(\"list\")\n .description(\"List all projects\")\n .action(async () => {\n try {\n const result = await getClient().listProjects();\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import { readFileSync, existsSync } from \"node:fs\";\nimport { join, dirname } from \"node:path\";\n\nconst CONFIG_FILE = \".thinkingpatterns.json\";\n\ninterface ProjectConfig {\n project_id?: string;\n}\n\n/\n Walk up from cwd looking for .thinkingpatterns.json.\n * Returns the parsed config or null if not found.\n /\nexport function loadProjectConfig(): ProjectConfig \| null {\n let dir = process.cwd();\n const root = dirname(dir) === dir ? dir : \"/\";\n\n while (true) {\n const filePath = join(dir, CONFIG_FILE);\n if (existsSync(filePath)) {\n try {\n const content = readFileSync(filePath, \"utf-8\");\n return JSON.parse(content) as ProjectConfig;\n } catch {\n return null;\n }\n }\n const parent = dirname(dir);\n if (parent === dir \|\| dir === root) break;\n dir = parent;\n }\n return null;\n}\n\n/\n Resolve project ID from explicit option, falling back to config file.\n * Exits with error if neither is available.\n */\nexport function resolveProjectId(explicit?: string): string {\n if (explicit) return explicit;\n const config = loadProjectConfig();\n if (config?.project_id) return config.project_id;\n process.stderr.write(\n \"Error: --project is required (or set project_id in .thinkingpatterns.json)\\n\"\n );\n process.exit(1);\n}\n","import type { Command } from \"commander\";\nimport type { TriageAction } from \"@thinkingpatterns/core\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerFindingCommands(program: Command): void {\n const findings = program\n .command(\"findings\")\n .description(\"Manage security findings\");\n\n findings\n .command(\"list\")\n .description(\"List findings for a project\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .option(\"--severity <severity>\", \"Filter by severity, comma-separated (critical,high,medium,low,info)\")\n .option(\"--status <status>\", \"Filter by status, comma-separated (open,triaged,completed,dismissed)\")\n .option(\"--category <category>\", \"Filter by category\")\n .option(\"--source-tool <tool>\", \"Filter by source tool\")\n .option(\"--module-path <path>\", \"Filter by module path prefix\")\n .option(\"--branch <branch>\", \"Filter by branch\")\n .option(\"--limit <n>\", \"Max results\", parseInt)\n .option(\"--offset <n>\", \"Result offset\", parseInt)\n .option(\"--verbose\", \"Show all fields (default: summary only)\")\n .action(async (opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const result = await getClient().listFindings({\n project_id: projectId,\n severity: opts.severity?.includes(\",\") ? opts.severity.split(\",\").map((s: string) => s.trim()) : opts.severity,\n status: opts.status?.includes(\",\") ? opts.status.split(\",\").map((s: string) => s.trim()) : opts.status,\n category: opts.category,\n source_tool: opts.sourceTool,\n module_path: opts.modulePath,\n branch: opts.branch,\n limit: opts.limit,\n offset: opts.offset,\n });\n if (!opts.verbose) {\n result.data = result.data.map((f: Record<string, unknown>) => ({\n id: f.id,\n title: f.title,\n severity: f.severity,\n status: f.status,\n category: f.category,\n code_location_file: f.code_location_file,\n code_location_line_start: f.code_location_line_start,\n first_seen_at: f.first_seen_at,\n }));\n }\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n findings\n .command(\"get <id>\")\n .description(\"Get finding details\")\n .action(async (id: string) => {\n try {\n const result = await getClient().getFinding(id);\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n findings\n .command(\"triage <id>\")\n .description(\"Triage a finding\")\n .requiredOption(\"--action <action>\", \"Triage action (accept\|dismiss\|defer\|complete\|reopen)\")\n .option(\"--reason <reason>\", \"Reason for the triage decision\")\n .action(async (id: string, opts) => {\n try {\n const result = await getClient().triageFinding(\n id,\n opts.action as TriageAction,\n opts.reason\n );\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n findings\n .command(\"bulk-triage\")\n .description(\"Triage multiple findings at once\")\n .requiredOption(\"--ids <ids>\", \"Comma-separated finding IDs\")\n .requiredOption(\"--action <action>\", \"Triage action (accept\|dismiss\|defer\|complete\|reopen)\")\n .option(\"--reason <reason>\", \"Reason for the triage decision\")\n .action(async (opts) => {\n try {\n const findingIds = opts.ids.split(\",\").map((s: string) => s.trim());\n const result = await getClient().bulkTriage({\n finding_ids: findingIds,\n action: opts.action as TriageAction,\n reason: opts.reason,\n });\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n findings\n .command(\"comment <id>\")\n .description(\"Add a comment to a finding\")\n .requiredOption(\"--body <text>\", \"Comment text\")\n .action(async (id: string, opts) => {\n try {\n const result = await getClient().addComment(id, opts.body);\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerMetricsCommands(program: Command): void {\n program\n .command(\"metrics\")\n .description(\"Get project metrics (MTTR, fix rate, open count)\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .action(async (opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const result = await getClient().getProjectMetrics(projectId);\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerRiskModulesCommands(program: Command): void {\n program\n .command(\"risk-modules\")\n .description(\"Get top risk modules for a project\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .option(\"--limit <n>\", \"Max results\", parseInt)\n .action(async (opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const result = await getClient().getTopRiskModules(projectId, opts.limit);\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerRunCommands(program: Command): void {\n const runs = program\n .command(\"runs\")\n .description(\"Manage scan runs\");\n\n runs\n .command(\"list\")\n .description(\"List runs for a project\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .option(\"--status <status>\", \"Filter by status\")\n .option(\"--limit <n>\", \"Max results\", parseInt)\n .option(\"--offset <n>\", \"Result offset\", parseInt)\n .action(async (opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const result = await getClient().listRuns(projectId, {\n status: opts.status,\n limit: opts.limit,\n offset: opts.offset,\n });\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n}\n","import { readFileSync } from \"node:fs\";\nimport type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerIngestCommands(program: Command): void {\n const ingest = program\n .command(\"ingest\")\n .description(\"Ingest scan results\");\n\n ingest\n .command(\"sarif\")\n .description(\"Ingest a SARIF file\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .option(\"-b, --branch <name>\", \"Branch name for scoping findings\")\n .option(\"--run-id <id>\", \"Associate with an existing run (skips auto-run creation)\")\n .requiredOption(\"--file <path>\", \"Path to SARIF file\")\n .action(async (opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const content = readFileSync(opts.file, \"utf-8\");\n if (opts.runId) {\n // Use direct SARIF upload to attach to the existing run\n const result = await getClient().ingestSarif(\n projectId,\n content,\n opts.branch,\n opts.runId\n );\n printJson(result);\n } else {\n // Chunked path — auto-creates a run\n const result = await getClient().ingestSarifChunked(\n projectId,\n content,\n opts.branch\n );\n printJson(result);\n }\n } catch (err) {\n printError(err);\n }\n });\n}\n","import { readFileSync } from \"node:fs\";\nimport type { Command } from \"commander\";\nimport { getClient } from \"../lib/client.js\";\nimport { printJson, printError } from \"../lib/output.js\";\nimport { resolveProjectId } from \"../lib/config.js\";\n\nexport function registerAgentCommands(program: Command): void {\n const agents = program\n .command(\"agents\")\n .description(\"Manage analysis agents\");\n\n agents\n .command(\"list\")\n .description(\"List available agents\")\n .option(\"--category <category>\", \"Filter by category\")\n .option(\"--status <status>\", \"Filter by status (draft\|active\|archived)\")\n .option(\"--limit <n>\", \"Max results\", parseInt)\n .option(\"--offset <n>\", \"Result offset\", parseInt)\n .action(async (opts) => {\n try {\n const result = await getClient().listAgents({\n category: opts.category,\n status: opts.status,\n limit: opts.limit,\n offset: opts.offset,\n });\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n agents\n .command(\"get <id>\")\n .description(\"Get agent details\")\n .action(async (id: string) => {\n try {\n const result = await getClient().getAgent(id);\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n agents\n .command(\"create\")\n .description(\"Create a new agent\")\n .requiredOption(\"--name <name>\", \"Agent name\")\n .requiredOption(\"--slug <slug>\", \"Agent slug (URL-safe identifier)\")\n .requiredOption(\"--skill-md <path>\", \"Path to SKILL.md file\")\n .option(\"--description <desc>\", \"Agent description\")\n .option(\"--category <category>\", \"Agent category\")\n .action(async (opts) => {\n try {\n const skillMd = readFileSync(opts.skillMd, \"utf-8\");\n const result = await getClient().createAgent({\n name: opts.name,\n slug: opts.slug,\n skill_md: skillMd,\n description: opts.description,\n category: opts.category,\n });\n printJson(result);\n } catch (err) {\n printError(err);\n }\n });\n\n agents\n .command(\"run <id>\")\n .description(\"Run an agent against a project\")\n .option(\"-p, --project <id>\", \"Project ID\")\n .option(\"-b, --branch <name>\", \"Branch name\")\n .action(async (id: string, opts) => {\n try {\n const projectId = resolveProjectId(opts.project);\n const client = getClient();\n const [agent, projects] = await Promise.all([\n client.getAgent(id),\n client.listProjects(),\n ]);\n const project = projects.find((p) => p.id === projectId);\n if (!project) {\n process.stderr.write(`Error: Project ${projectId} not found\\n`);\n process.exit(3);\n }\n\n const branch = opts.branch ?? project.default_branch ?? \"main\";\n\n // Create a run record upfront so it appears on the runs page\n const run = await client.createRun({\n project_id: projectId,\n agent_definition_id: agent.slug,\n trigger_type: \"mcp\",\n scope_type: \"full\",\n branch,\n });\n await client.updateRunStatus(run.id, \"running\");\n\n printJson({\n agent: { id: agent.id, name: agent.name, slug: agent.slug },\n project: { id: project.id, name: project.name },\n run: { id: run.id, status: \"running\" },\n skill_md: agent.skill_md,\n instruction:\n \"Follow the SKILL.md workflow above. 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package/package.json CHANGED Viewed

@@ -1,6 +1,6 @@
 {
   "name": "@thinkingpatterns/cli",
-  "version": "0.2.1",
+  "version": "0.2.2",
   "description": "ThinkingPatterns CLI for security findings management",
   "type": "module",
   "main": "dist/index.js",