@theglitchking/semantic-pages 0.6.4 → 0.6.6

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package/README.md CHANGED
@@ -88,50 +88,60 @@ Only the 14 read tools are exposed (`search_*`, `read_note`, `read_multiple_note
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  ### 1. Installation Methods
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- #### Method A: NPX (No installation needed)
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+ #### Method A: Claude Code Plugin (Recommended zero config, auto-wires)
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- This lets you run the server without installing it permanently.
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+ The easiest path if you use Claude Code. Install once per project; the plugin handles `.mcp.json` wiring automatically.
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- **Step 1**: Open your terminal in your project folder
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-
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- **Step 2**: Run:
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  ```bash
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- npx semantic-pages --notes ./vault --stats
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+ # Inside a Claude Code session:
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+ /plugin marketplace add TheGlitchKing/semantic-pages
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+ /plugin install semantic-pages@semantic-pages-marketplace
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  ```
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- **Step 3**: The first time you run it, NPX downloads the package and the embedding model (~80MB). This takes 1-2 minutes.
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-
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- **Step 4**: After that, it runs instantly.
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-
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- **Use this method when**: You want to try it out, or you're adding it to a project's `.mcp.json` config.
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+ What happens next session:
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+ 1. A `SessionStart` hook runs and ensures `./.claude/.vault/` exists
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+ 2. Your project's `.mcp.json` gets a `semantic-vault` entry pointed at `./.claude/.vault` (read/write)
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+ 3. **If** `hit-em-with-the-docs` is also installed **and** `./.documentation/` exists → a second `semantic-pages` entry is added, pointed at `./.documentation` with `--read-only`
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+ 4. You get 21 tools (14 if the docs server is the one being used) for semantic search, graph traversal, and (for the vault) note CRUD
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- #### Method B: Global Installation (Recommended for regular use)
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+ No manual `.mcp.json` editing. Uninstalling the plugin cleanly leaves your existing entries alone on the next session.
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- This installs the tool on your computer so you can use it in any project.
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+ #### Method B: Project Installation (Recommended for teams and AI-assisted projects)
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- **Step 1**: Open your terminal
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+ Install per-project so the version is pinned in `package.json`, stays in sync across teammates and CI, and is visible to any LLM reading the repo.
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- **Step 2**: Type this command and press Enter:
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  ```bash
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- npm install -g @theglitchking/semantic-pages
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+ npm install --save-dev @theglitchking/semantic-pages
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  ```
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- **Step 3**: Test that it worked:
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- ```bash
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- semantic-pages --version
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+ Add to your project's `.mcp.json`:
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+
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+ ```json
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+ {
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+ "mcpServers": {
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+ "semantic-vault": {
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+ "type": "stdio",
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+ "command": "npx",
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+ "args": ["--no", "@theglitchking/semantic-pages", "--notes", "./.claude/.vault"]
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+ }
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+ }
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+ }
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  ```
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- **Step 4**: You should see a version number. If you do, it's installed correctly!
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+ > **Why project-level over global?** A global install is invisible to collaborators, CI, and LLMs reading the repo. A project-level install pins the exact version in `package.json`, so every agent and developer working in the repo sees the same binary. Use `npx --no` (not `npx -y`) so npx uses the locally-installed version instead of fetching from the registry.
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- #### Method C: MCP Configuration (Recommended for Claude Code)
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+ #### Method C: MCP Configuration via NPX (Quick setup, no install)
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- Add to your project's `.mcp.json` so Claude has automatic access:
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+ Add directly to your project's `.mcp.json`. npx downloads and caches the package on first use.
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  ```json
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  {
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- "semantic-pages": {
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- "command": "npx",
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- "args": ["-y", "semantic-pages", "--notes", "./vault"]
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+ "mcpServers": {
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+ "semantic-vault": {
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+ "type": "stdio",
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+ "command": "npx",
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+ "args": ["-y", "@theglitchking/semantic-pages", "--notes", "./.claude/.vault"]
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+ }
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  }
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  }
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  ```
@@ -140,45 +150,23 @@ Point `--notes` at any folder of `.md` files: `./vault`, `./docs`, `./notes`, or
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  **What to expect**: Next time you run `claude` in that project, Claude will have 21 new tools for searching, reading, writing, and traversing your notes.
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- #### Method D: Project Installation (For team projects)
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-
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- This installs the tool only for one specific project.
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+ > **Note on `@latest` and npx caching**: If you use `@latest` in the args, npx may serve a stale cached version after a new release. To force a refresh: `rm -rf ~/.npm/_npx/*/node_modules/@theglitchking`. Project-level installation (Method B) avoids this entirely.
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- **Step 1**: Open your terminal in your project folder
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+ #### Method D: Try it with NPX (No installation needed)
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- **Step 2**: Type this command:
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  ```bash
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- npm install --save-dev @theglitchking/semantic-pages
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- ```
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-
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- **Step 3**: Add a script to your `package.json` file:
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- ```json
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- {
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- "scripts": {
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- "notes": "semantic-pages --notes ./vault",
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- "notes:stats": "semantic-pages --notes ./vault --stats",
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- "notes:reindex": "semantic-pages --notes ./vault --reindex"
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- }
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- }
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+ npx @theglitchking/semantic-pages --notes ./vault --stats
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  ```
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- #### Method E: Claude Code Plugin (Recommended zero config, auto-wires)
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+ The first run downloads the package and the embedding model (~80 MB) and takes 1–2 minutes. After that it runs instantly from cache. Use this to evaluate before committing to a project install.
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- This is the easiest path if you use Claude Code and want `.claude/.vault/` + (optionally) `.documentation/` indexed automatically.
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+ #### Method E: Global Installation (Not recommended)
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  ```bash
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- # Inside a Claude Code session:
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- /plugin marketplace add TheGlitchKing/semantic-pages
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- /plugin install semantic-pages@semantic-pages-marketplace
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+ npm install -g @theglitchking/semantic-pages
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  ```
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- What happens next session:
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- 1. A `SessionStart` hook runs and ensures `./.claude/.vault/` exists
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- 2. Your project's `.mcp.json` gets a `semantic-vault` entry pointed at `./.claude/.vault` (read/write)
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- 3. **If** `hit-em-with-the-docs` is also installed **and** `./.documentation/` exists → a second `semantic-pages` entry is added, pointed at `./.documentation` with `--read-only`
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- 4. You get 21 tools (14 if the docs server is the one being used) for semantic search, graph traversal, and (for the vault) note CRUD
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-
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- No manual `.mcp.json` editing. Uninstalling the plugin cleanly leaves your existing entries alone on the next session.
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+ Avoid this for projects — a global install is invisible to collaborators, CI, and LLMs reading the repo, and will silently fall out of sync with the version everyone else is using. Use project-level installation (Method B) instead.
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  ---
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package/dist/cli/index.js CHANGED
@@ -4,6 +4,8 @@
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  import { program } from "commander";
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  import { resolve } from "path";
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  import { existsSync } from "fs";
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+ import { createRequire } from "module";
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+ var { version } = createRequire(import.meta.url)("../../package.json");
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  var TOOL_HELP = {
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  // Search
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  search_semantic: {
@@ -199,7 +201,7 @@ function printToolDetail(name) {
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  }
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  program.name("semantic-pages").description(
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  "Semantic search + knowledge graph MCP server for markdown files\n\n Start MCP server: semantic-pages --notes ./vault\n Show vault stats: semantic-pages --notes ./vault --stats\n Force reindex: semantic-pages --notes ./vault --reindex\n List MCP tools: semantic-pages tools\n Tool details: semantic-pages tools search_semantic"
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- ).version("0.4.3");
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+ ).version(version);
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  program.command("tools [name]").description("List all MCP tools, or show details for a specific tool").action((name) => {
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  if (name) {
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  printToolDetail(name);
@@ -1 +1 @@
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- {"version":3,"sources":["../../src/cli/index.ts"],"sourcesContent":["#!/usr/bin/env node\n\nimport { program } from \"commander\";\nimport { resolve } from \"node:path\";\nimport { existsSync } from \"node:fs\";\n\nconst TOOL_HELP: Record<string, { description: string; args: string; examples: string[] }> = {\n // Search\n search_semantic: {\n description: \"Vector similarity search — find notes by meaning, not just keywords\",\n args: '{ \"query\": \"string\", \"limit?\": 10 }',\n examples: [\n '{ \"query\": \"microservices architecture\", \"limit\": 5 }',\n '{ \"query\": \"how to deploy to production\" }',\n ],\n },\n search_text: {\n description: \"Full-text keyword or regex search with optional filters\",\n args: '{ \"pattern\": \"string\", \"regex?\": false, \"caseSensitive?\": false, \"pathGlob?\": \"string\", \"tagFilter?\": [\"string\"], \"limit?\": 20 }',\n examples: [\n '{ \"pattern\": \"RabbitMQ\" }',\n '{ \"pattern\": \"OAuth\\\\\\\\d\", \"regex\": true }',\n '{ \"pattern\": \"deploy\", \"pathGlob\": \"devops/**\", \"tagFilter\": [\"kubernetes\"] }',\n ],\n },\n search_graph: {\n description: \"Graph traversal — find notes connected to a concept via wikilinks and tags\",\n args: '{ \"concept\": \"string\", \"maxDepth?\": 2 }',\n examples: [\n '{ \"concept\": \"microservices\" }',\n '{ \"concept\": \"auth\", \"maxDepth\": 3 }',\n ],\n },\n search_hybrid: {\n description: \"Combined semantic + graph search — vector results re-ranked by graph proximity\",\n args: '{ \"query\": \"string\", \"limit?\": 10 }',\n examples: [\n '{ \"query\": \"event driven architecture\", \"limit\": 5 }',\n ],\n },\n\n // Read\n read_note: {\n description: \"Read the full content of a specific note by path\",\n args: '{ \"path\": \"string\" }',\n examples: [\n '{ \"path\": \"project-overview.md\" }',\n '{ \"path\": \"notes/meeting-2024-01-15.md\" }',\n ],\n },\n read_multiple_notes: {\n description: \"Batch read multiple notes in one call\",\n args: '{ \"paths\": [\"string\"] }',\n examples: [\n '{ \"paths\": [\"overview.md\", \"architecture.md\", \"deployment.md\"] }',\n ],\n },\n list_notes: {\n description: \"List all indexed notes with metadata (title, tags, link count)\",\n args: \"{}\",\n examples: [\"{}\"],\n },\n\n // Write\n create_note: {\n description: \"Create a new markdown note with optional YAML frontmatter\",\n args: '{ \"path\": \"string\", \"content\": \"string\", \"frontmatter?\": {} }',\n examples: [\n '{ \"path\": \"new-guide.md\", \"content\": \"# Guide\\\\n\\\\nContent here.\" }',\n '{ \"path\": \"tagged.md\", \"content\": \"Content.\", \"frontmatter\": { \"title\": \"Tagged Note\", \"tags\": [\"test\"] } }',\n ],\n },\n update_note: {\n description: \"Edit note content — overwrite, append, prepend, or patch by heading\",\n args: '{ \"path\": \"string\", \"content\": \"string\", \"mode\": \"overwrite|append|prepend|patch-by-heading\", \"heading?\": \"string\" }',\n examples: [\n '{ \"path\": \"guide.md\", \"content\": \"New content.\", \"mode\": \"overwrite\" }',\n '{ \"path\": \"guide.md\", \"content\": \"\\\\n## Appendix\\\\nExtra info.\", \"mode\": \"append\" }',\n '{ \"path\": \"guide.md\", \"content\": \"Updated architecture section.\", \"mode\": \"patch-by-heading\", \"heading\": \"Architecture\" }',\n ],\n },\n delete_note: {\n description: \"Delete a note permanently (requires confirm=true)\",\n args: '{ \"path\": \"string\", \"confirm\": true }',\n examples: [\n '{ \"path\": \"old-note.md\", \"confirm\": true }',\n '{ \"path\": \"old-note.md\", \"confirm\": false } // returns warning, does not delete',\n ],\n },\n move_note: {\n description: \"Move or rename a note — automatically updates wikilinks across the vault\",\n args: '{ \"from\": \"string\", \"to\": \"string\" }',\n examples: [\n '{ \"from\": \"user-service.md\", \"to\": \"auth-service.md\" }',\n '{ \"from\": \"old/note.md\", \"to\": \"new/location/note.md\" }',\n ],\n },\n\n // Metadata\n get_frontmatter: {\n description: \"Read parsed YAML frontmatter from a note as JSON\",\n args: '{ \"path\": \"string\" }',\n examples: ['{ \"path\": \"project-overview.md\" }'],\n },\n update_frontmatter: {\n description: \"Set or delete YAML frontmatter keys — pass null to delete a key\",\n args: '{ \"path\": \"string\", \"fields\": {} }',\n examples: [\n '{ \"path\": \"note.md\", \"fields\": { \"status\": \"active\", \"priority\": 1 } }',\n '{ \"path\": \"note.md\", \"fields\": { \"deprecated_field\": null } } // deletes the key',\n ],\n },\n manage_tags: {\n description: \"Add, remove, or list tags on a note (frontmatter and inline)\",\n args: '{ \"path\": \"string\", \"action\": \"add|remove|list\", \"tags?\": [\"string\"] }',\n examples: [\n '{ \"path\": \"note.md\", \"action\": \"list\" }',\n '{ \"path\": \"note.md\", \"action\": \"add\", \"tags\": [\"important\", \"reviewed\"] }',\n '{ \"path\": \"note.md\", \"action\": \"remove\", \"tags\": [\"draft\"] }',\n ],\n },\n rename_tag: {\n description: \"Rename a tag across all notes in the vault (frontmatter + inline)\",\n args: '{ \"oldTag\": \"string\", \"newTag\": \"string\" }',\n examples: ['{ \"oldTag\": \"architecture\", \"newTag\": \"arch\" }'],\n },\n\n // Graph\n backlinks: {\n description: \"Find all notes that link TO a given note via [[wikilinks]]\",\n args: '{ \"path\": \"string\" }',\n examples: ['{ \"path\": \"microservices.md\" }'],\n },\n forwardlinks: {\n description: \"Find all notes linked FROM a given note\",\n args: '{ \"path\": \"string\" }',\n examples: ['{ \"path\": \"project-overview.md\" }'],\n },\n graph_path: {\n description: \"Find the shortest path between two notes in the knowledge graph\",\n args: '{ \"from\": \"string\", \"to\": \"string\" }',\n examples: ['{ \"from\": \"project-overview.md\", \"to\": \"user-service.md\" }'],\n },\n graph_statistics: {\n description: \"Knowledge graph stats — most connected nodes, orphans, density\",\n args: \"{}\",\n examples: [\"{}\"],\n },\n\n // System\n get_stats: {\n description: \"Vault and index statistics — note count, chunks, embeddings, graph density\",\n args: \"{}\",\n examples: [\"{}\"],\n },\n reindex: {\n description: \"Force a full reindex of the vault\",\n args: \"{}\",\n examples: [\"{}\"],\n },\n};\n\nconst TOOL_CATEGORIES: Record<string, string[]> = {\n Search: [\"search_semantic\", \"search_text\", \"search_graph\", \"search_hybrid\"],\n Read: [\"read_note\", \"read_multiple_notes\", \"list_notes\"],\n Write: [\"create_note\", \"update_note\", \"delete_note\", \"move_note\"],\n Metadata: [\"get_frontmatter\", \"update_frontmatter\", \"manage_tags\", \"rename_tag\"],\n Graph: [\"backlinks\", \"forwardlinks\", \"graph_path\", \"graph_statistics\"],\n System: [\"get_stats\", \"reindex\"],\n};\n\nfunction printToolList() {\n console.log(\"\\nSemantic Pages — 21 MCP Tools\\n\");\n console.log(\"Usage: These tools are available via MCP when the server is running.\");\n console.log(\" Run `semantic-pages tools <name>` for details on a specific tool.\\n\");\n\n for (const [category, tools] of Object.entries(TOOL_CATEGORIES)) {\n console.log(` ${category}:`);\n for (const name of tools) {\n const tool = TOOL_HELP[name];\n console.log(` ${name.padEnd(24)} ${tool.description}`);\n }\n console.log();\n }\n\n console.log(\"Run `semantic-pages tools <tool-name>` for arguments and examples.\");\n}\n\nfunction printToolDetail(name: string) {\n const tool = TOOL_HELP[name];\n if (!tool) {\n console.error(`Unknown tool: ${name}`);\n console.error(`Run \\`semantic-pages tools\\` to see all available tools.`);\n process.exit(1);\n }\n\n console.log(`\\n ${name}`);\n console.log(` ${\"─\".repeat(name.length)}`);\n console.log(` ${tool.description}\\n`);\n console.log(` Arguments:`);\n console.log(` ${tool.args}\\n`);\n console.log(` Examples:`);\n for (const ex of tool.examples) {\n console.log(` ${ex}`);\n }\n console.log();\n}\n\nprogram\n .name(\"semantic-pages\")\n .description(\n \"Semantic search + knowledge graph MCP server for markdown files\\n\\n\" +\n \" Start MCP server: semantic-pages --notes ./vault\\n\" +\n \" Show vault stats: semantic-pages --notes ./vault --stats\\n\" +\n \" Force reindex: semantic-pages --notes ./vault --reindex\\n\" +\n \" List MCP tools: semantic-pages tools\\n\" +\n \" Tool details: semantic-pages tools search_semantic\"\n )\n .version(\"0.4.3\");\n\nprogram\n .command(\"tools [name]\")\n .description(\"List all MCP tools, or show details for a specific tool\")\n .action((name?: string) => {\n if (name) {\n printToolDetail(name);\n } else {\n printToolList();\n }\n process.exit(0);\n });\n\nprogram\n .command(\"serve\", { isDefault: true })\n .description(\"Start the MCP server (default command)\")\n .requiredOption(\"--notes <path>\", \"Path to markdown notes directory\")\n .option(\"--reindex\", \"Force full reindex and exit\")\n .option(\"--stats\", \"Show vault statistics and exit\")\n .option(\"--wait-for-ready\", \"Block startup until index is fully built before serving (default: index in background; tools return 'Indexing in progress' until ready)\")\n .option(\"--read-only\", \"Suppress write tools (create_note, update_note, delete_note, move_note, update_frontmatter, manage_tags, rename_tag) — use for shared docs vaults owned by another tool\")\n .option(\"--model <name>\", \"Embedding model to use (default: all-MiniLM-L6-v2, fast; use nomic-ai/nomic-embed-text-v1.5 for higher quality)\")\n .option(\"--workers <n>\", \"Number of worker threads for parallel embedding\", parseInt)\n .option(\"--batch-size <n>\", \"Texts per ONNX forward pass (default: 8)\", parseInt)\n .option(\"--no-quantized\", \"Use full-precision model instead of quantized (slower, slightly higher quality)\")\n .option(\"--no-watch\", \"Disable file watcher\")\n .action(async (opts) => {\n const notesPath = resolve(opts.notes);\n\n if (!existsSync(notesPath)) {\n console.error(`Error: notes directory not found: ${notesPath}`);\n process.exit(1);\n }\n\n if (opts.stats) {\n const { Indexer } = await import(\"../core/indexer.js\");\n const indexer = new Indexer(notesPath);\n const docs = await indexer.indexAll();\n console.log(`Notes: ${docs.length}`);\n console.log(`Chunks: ${docs.reduce((n: number, d: any) => n + d.chunks.length, 0)}`);\n console.log(`Wikilinks: ${docs.reduce((n: number, d: any) => n + d.wikilinks.length, 0)}`);\n console.log(`Tags: ${new Set(docs.flatMap((d: any) => d.tags)).size} unique`);\n process.exit(0);\n }\n\n if (opts.reindex) {\n const { createServer } = await import(\"../mcp/server.js\");\n await createServer(notesPath, {\n watch: false,\n waitForReady: true,\n model: opts.model,\n workers: opts.workers,\n batchSize: opts.batchSize,\n quantized: opts.quantized,\n onProgress: (embedded, total) => {\n process.stderr.write(`\\rEmbedding ${embedded}/${total} chunks...`);\n },\n });\n process.stderr.write(\"\\n\");\n console.log(\"Reindex complete.\");\n process.exit(0);\n }\n\n // Default: start MCP server on stdio\n const { startServer } = await import(\"../mcp/server.js\");\n await startServer(notesPath, {\n watch: opts.watch,\n waitForReady: opts.waitForReady,\n model: opts.model,\n workers: opts.workers,\n batchSize: opts.batchSize,\n quantized: opts.quantized,\n readOnly: opts.readOnly,\n });\n 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+ {"version":3,"sources":["../../src/cli/index.ts"],"sourcesContent":["#!/usr/bin/env node\n\nimport { program } from \"commander\";\nimport { resolve } from \"node:path\";\nimport { existsSync } from \"node:fs\";\nimport { createRequire } from \"node:module\";\n\nconst { version } = createRequire(import.meta.url)(\"../../package.json\") as { version: string };\n\nconst TOOL_HELP: Record<string, { description: string; args: string; examples: string[] }> = {\n // Search\n search_semantic: {\n description: \"Vector similarity search — find notes by meaning, not just keywords\",\n args: '{ \"query\": \"string\", \"limit?\": 10 }',\n examples: [\n '{ \"query\": \"microservices architecture\", \"limit\": 5 }',\n '{ \"query\": \"how to deploy to production\" }',\n ],\n },\n search_text: {\n description: \"Full-text keyword or regex search with optional filters\",\n args: '{ \"pattern\": \"string\", \"regex?\": false, \"caseSensitive?\": false, \"pathGlob?\": \"string\", \"tagFilter?\": [\"string\"], \"limit?\": 20 }',\n examples: [\n '{ \"pattern\": \"RabbitMQ\" }',\n '{ \"pattern\": \"OAuth\\\\\\\\d\", \"regex\": true }',\n '{ \"pattern\": \"deploy\", \"pathGlob\": \"devops/**\", \"tagFilter\": [\"kubernetes\"] }',\n ],\n },\n search_graph: {\n description: \"Graph traversal — find notes connected to a concept via wikilinks and tags\",\n args: '{ \"concept\": \"string\", \"maxDepth?\": 2 }',\n examples: [\n '{ \"concept\": \"microservices\" }',\n '{ \"concept\": \"auth\", \"maxDepth\": 3 }',\n ],\n },\n search_hybrid: {\n description: \"Combined semantic + graph search — vector results re-ranked by graph proximity\",\n args: '{ \"query\": \"string\", \"limit?\": 10 }',\n examples: [\n '{ \"query\": \"event driven architecture\", \"limit\": 5 }',\n ],\n },\n\n // Read\n read_note: {\n description: \"Read the full content of a specific note by path\",\n args: '{ \"path\": \"string\" }',\n examples: [\n '{ \"path\": \"project-overview.md\" }',\n '{ \"path\": \"notes/meeting-2024-01-15.md\" }',\n ],\n },\n read_multiple_notes: {\n description: \"Batch read multiple notes in one call\",\n args: '{ \"paths\": [\"string\"] }',\n examples: [\n '{ \"paths\": [\"overview.md\", \"architecture.md\", \"deployment.md\"] }',\n ],\n },\n list_notes: {\n description: \"List all indexed notes with metadata (title, tags, link count)\",\n args: \"{}\",\n examples: [\"{}\"],\n },\n\n // Write\n create_note: {\n description: \"Create a new markdown note with optional YAML frontmatter\",\n args: '{ \"path\": \"string\", \"content\": \"string\", \"frontmatter?\": {} }',\n examples: [\n '{ \"path\": \"new-guide.md\", \"content\": \"# Guide\\\\n\\\\nContent here.\" }',\n '{ \"path\": \"tagged.md\", \"content\": \"Content.\", \"frontmatter\": { \"title\": \"Tagged Note\", \"tags\": [\"test\"] } }',\n ],\n },\n update_note: {\n description: \"Edit note content — overwrite, append, prepend, or patch by heading\",\n args: '{ \"path\": \"string\", \"content\": \"string\", \"mode\": \"overwrite|append|prepend|patch-by-heading\", \"heading?\": \"string\" }',\n examples: [\n '{ \"path\": \"guide.md\", \"content\": \"New content.\", \"mode\": \"overwrite\" }',\n '{ \"path\": \"guide.md\", \"content\": \"\\\\n## Appendix\\\\nExtra info.\", \"mode\": \"append\" }',\n '{ \"path\": \"guide.md\", \"content\": \"Updated architecture section.\", \"mode\": \"patch-by-heading\", \"heading\": \"Architecture\" }',\n ],\n },\n delete_note: {\n description: \"Delete a note permanently (requires confirm=true)\",\n args: '{ \"path\": \"string\", \"confirm\": true }',\n examples: [\n '{ \"path\": \"old-note.md\", \"confirm\": true }',\n '{ \"path\": \"old-note.md\", \"confirm\": false } // returns warning, does not delete',\n ],\n },\n move_note: {\n description: \"Move or rename a note — automatically updates wikilinks across the vault\",\n args: '{ \"from\": \"string\", \"to\": \"string\" }',\n examples: [\n '{ \"from\": \"user-service.md\", \"to\": \"auth-service.md\" }',\n '{ \"from\": \"old/note.md\", \"to\": \"new/location/note.md\" }',\n ],\n },\n\n // Metadata\n get_frontmatter: {\n description: \"Read parsed YAML frontmatter from a note as JSON\",\n args: '{ \"path\": \"string\" }',\n examples: ['{ \"path\": \"project-overview.md\" }'],\n },\n update_frontmatter: {\n description: \"Set or delete YAML frontmatter keys — pass null to delete a key\",\n args: '{ \"path\": \"string\", \"fields\": {} }',\n examples: [\n '{ \"path\": \"note.md\", \"fields\": { \"status\": \"active\", \"priority\": 1 } }',\n '{ \"path\": \"note.md\", \"fields\": { \"deprecated_field\": null } } // deletes the key',\n ],\n },\n manage_tags: {\n description: \"Add, remove, or list tags on a note (frontmatter and inline)\",\n args: '{ \"path\": \"string\", \"action\": \"add|remove|list\", \"tags?\": [\"string\"] }',\n examples: [\n '{ \"path\": \"note.md\", \"action\": \"list\" }',\n '{ \"path\": \"note.md\", \"action\": \"add\", \"tags\": [\"important\", \"reviewed\"] }',\n '{ \"path\": \"note.md\", \"action\": \"remove\", \"tags\": [\"draft\"] }',\n ],\n },\n rename_tag: {\n description: \"Rename a tag across all notes in the vault (frontmatter + inline)\",\n args: '{ \"oldTag\": \"string\", \"newTag\": \"string\" }',\n examples: ['{ \"oldTag\": \"architecture\", \"newTag\": \"arch\" }'],\n },\n\n // Graph\n backlinks: {\n description: \"Find all notes that link TO a given note via [[wikilinks]]\",\n args: '{ \"path\": \"string\" }',\n examples: ['{ \"path\": \"microservices.md\" }'],\n },\n forwardlinks: {\n description: \"Find all notes linked FROM a given note\",\n args: '{ \"path\": \"string\" }',\n examples: ['{ \"path\": \"project-overview.md\" }'],\n },\n graph_path: {\n description: \"Find the shortest path between two notes in the knowledge graph\",\n args: '{ \"from\": \"string\", \"to\": \"string\" }',\n examples: ['{ \"from\": \"project-overview.md\", \"to\": \"user-service.md\" }'],\n },\n graph_statistics: {\n description: \"Knowledge graph stats — most connected nodes, orphans, density\",\n args: \"{}\",\n examples: [\"{}\"],\n },\n\n // System\n get_stats: {\n description: \"Vault and index statistics — note count, chunks, embeddings, graph density\",\n args: \"{}\",\n examples: [\"{}\"],\n },\n reindex: {\n description: \"Force a full reindex of the vault\",\n args: \"{}\",\n examples: [\"{}\"],\n },\n};\n\nconst TOOL_CATEGORIES: Record<string, string[]> = {\n Search: [\"search_semantic\", \"search_text\", \"search_graph\", \"search_hybrid\"],\n Read: [\"read_note\", \"read_multiple_notes\", \"list_notes\"],\n Write: [\"create_note\", \"update_note\", \"delete_note\", \"move_note\"],\n Metadata: [\"get_frontmatter\", \"update_frontmatter\", \"manage_tags\", \"rename_tag\"],\n Graph: [\"backlinks\", \"forwardlinks\", \"graph_path\", \"graph_statistics\"],\n System: [\"get_stats\", \"reindex\"],\n};\n\nfunction printToolList() {\n console.log(\"\\nSemantic Pages — 21 MCP Tools\\n\");\n console.log(\"Usage: These tools are available via MCP when the server is running.\");\n console.log(\" Run `semantic-pages tools <name>` for details on a specific tool.\\n\");\n\n for (const [category, tools] of Object.entries(TOOL_CATEGORIES)) {\n console.log(` ${category}:`);\n for (const name of tools) {\n const tool = TOOL_HELP[name];\n console.log(` ${name.padEnd(24)} ${tool.description}`);\n }\n console.log();\n }\n\n console.log(\"Run `semantic-pages tools <tool-name>` for arguments and examples.\");\n}\n\nfunction printToolDetail(name: string) {\n const tool = TOOL_HELP[name];\n if (!tool) {\n console.error(`Unknown tool: ${name}`);\n console.error(`Run \\`semantic-pages tools\\` to see all available tools.`);\n process.exit(1);\n }\n\n console.log(`\\n ${name}`);\n console.log(` ${\"─\".repeat(name.length)}`);\n console.log(` ${tool.description}\\n`);\n console.log(` Arguments:`);\n console.log(` ${tool.args}\\n`);\n console.log(` Examples:`);\n for (const ex of tool.examples) {\n console.log(` ${ex}`);\n }\n console.log();\n}\n\nprogram\n .name(\"semantic-pages\")\n .description(\n \"Semantic search + knowledge graph MCP server for markdown files\\n\\n\" +\n \" Start MCP server: semantic-pages --notes ./vault\\n\" +\n \" Show vault stats: semantic-pages --notes ./vault --stats\\n\" +\n \" Force reindex: semantic-pages --notes ./vault --reindex\\n\" +\n \" List MCP tools: semantic-pages tools\\n\" +\n \" Tool details: semantic-pages tools search_semantic\"\n )\n .version(version);\n\nprogram\n .command(\"tools [name]\")\n .description(\"List all MCP tools, or show details for a specific tool\")\n .action((name?: string) => {\n if (name) {\n printToolDetail(name);\n } else {\n printToolList();\n }\n process.exit(0);\n });\n\nprogram\n .command(\"serve\", { isDefault: true })\n .description(\"Start the MCP server (default command)\")\n .requiredOption(\"--notes <path>\", \"Path to markdown notes directory\")\n .option(\"--reindex\", \"Force full reindex and exit\")\n .option(\"--stats\", \"Show vault statistics and exit\")\n .option(\"--wait-for-ready\", \"Block startup until index is fully built before serving (default: index in background; tools return 'Indexing in progress' until ready)\")\n .option(\"--read-only\", \"Suppress write tools (create_note, update_note, delete_note, move_note, update_frontmatter, manage_tags, rename_tag) — use for shared docs vaults owned by another tool\")\n .option(\"--model <name>\", \"Embedding model to use (default: all-MiniLM-L6-v2, fast; use nomic-ai/nomic-embed-text-v1.5 for higher quality)\")\n .option(\"--workers <n>\", \"Number of worker threads for parallel embedding\", parseInt)\n .option(\"--batch-size <n>\", \"Texts per ONNX forward pass (default: 8)\", parseInt)\n .option(\"--no-quantized\", \"Use full-precision model instead of quantized (slower, slightly higher quality)\")\n .option(\"--no-watch\", \"Disable file watcher\")\n .action(async (opts) => {\n const notesPath = resolve(opts.notes);\n\n if (!existsSync(notesPath)) {\n console.error(`Error: notes directory not found: ${notesPath}`);\n process.exit(1);\n }\n\n if (opts.stats) {\n const { Indexer } = await import(\"../core/indexer.js\");\n const indexer = new Indexer(notesPath);\n const docs = await indexer.indexAll();\n console.log(`Notes: ${docs.length}`);\n console.log(`Chunks: ${docs.reduce((n: number, d: any) => n + d.chunks.length, 0)}`);\n console.log(`Wikilinks: ${docs.reduce((n: number, d: any) => n + d.wikilinks.length, 0)}`);\n console.log(`Tags: ${new Set(docs.flatMap((d: any) => d.tags)).size} unique`);\n process.exit(0);\n }\n\n if (opts.reindex) {\n const { createServer } = await import(\"../mcp/server.js\");\n await createServer(notesPath, {\n watch: false,\n waitForReady: true,\n model: opts.model,\n workers: opts.workers,\n batchSize: opts.batchSize,\n quantized: opts.quantized,\n onProgress: (embedded, total) => {\n process.stderr.write(`\\rEmbedding 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package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@theglitchking/semantic-pages",
3
- "version": "0.6.4",
3
+ "version": "0.6.6",
4
4
  "description": "Semantic search + knowledge graph MCP server for markdown vaults. Claude Code plugin with auto-wiring for .claude/.vault and read-only .documentation companion when hit-em-with-the-docs is installed.",
5
5
  "type": "module",
6
6
  "main": "./dist/core/index.js",