@theglitchking/semantic-pages 0.4.9 → 0.6.0

package/.claude-plugin/marketplace.json

@@ -0,0 +1,47 @@
+{
+  "name": "semantic-pages-marketplace",
+  "owner": {
+    "name": "TheGlitchKing",
+    "email": "theglitchking@users.noreply.github.com"
+  },
+  "metadata": {
+    "description": "Official marketplace for semantic-pages - Semantic search + knowledge graph MCP server with auto-wiring for .claude/.vault and hit-em-with-the-docs companion",
+    "version": "0.6.0"
+  },
+  "plugins": [
+    {
+      "name": "semantic-pages",
+      "description": "Semantic search + knowledge graph MCP server for markdown vaults. Auto-wires a read/write vault at .claude/.vault, and a read-only docs index at .documentation when hit-em-with-the-docs is also installed.",
+      "version": "0.6.0",
+      "author": {
+        "name": "TheGlitchKing"
+      },
+      "homepage": "https://github.com/TheGlitchKing/semantic-pages",
+      "repository": "https://github.com/TheGlitchKing/semantic-pages.git",
+      "license": "MIT",
+      "keywords": [
+        "mcp",
+        "semantic-search",
+        "knowledge-graph",
+        "markdown",
+        "vector-search",
+        "embeddings",
+        "wikilinks",
+        "vault",
+        "claude-code"
+      ],
+      "category": "search",
+      "tags": [
+        "mcp-server",
+        "semantic-search",
+        "knowledge-graph",
+        "auto-wire"
+      ],
+      "source": {
+        "source": "npm",
+        "package": "@theglitchking/semantic-pages"
+      },
+      "strict": true
+    }
+  ]
+}

package/.claude-plugin/plugin.json

@@ -0,0 +1,22 @@
+{
+  "name": "semantic-pages",
+  "description": "Semantic search + knowledge graph MCP server for markdown vaults. Auto-wires a read/write vault at .claude/.vault, and a read-only docs index at .documentation when hit-em-with-the-docs is also installed.",
+  "version": "0.6.0",
+  "author": {
+    "name": "TheGlitchKing",
+    "email": "theglitchking@users.noreply.github.com"
+  },
+  "license": "MIT",
+  "homepage": "https://github.com/TheGlitchKing/semantic-pages",
+  "repository": "https://github.com/TheGlitchKing/semantic-pages",
+  "keywords": [
+    "mcp",
+    "semantic-search",
+    "knowledge-graph",
+    "markdown",
+    "vector-search",
+    "embeddings",
+    "wikilinks",
+    "vault"
+  ]
+}

package/README.md

@@ -39,6 +39,48 @@ The index is stored in `.semantic-pages-index/` alongside your notes (gitignore
 - **File Watcher**: Incremental re-indexing on file changes with debounce
 - **Local Embeddings**: No API key, no network after first model download
 - **Zero Dependencies Beyond Node**: No Docker, no Python, no Obsidian, no GUI
+- **Auto-Wire**: Installing the Claude Code plugin auto-creates `./.claude/.vault/` and wires it as a read/write MCP server — no manual `.mcp.json` editing required
+- **Sister Plugin Companion**: When [`hit-em-with-the-docs`](https://github.com/TheGlitchKing/hit-em-with-the-docs) is also installed, a second **read-only** MCP server is auto-wired at `./.documentation/` so you can semantically search your docs without risking accidental writes to a tree that hewtd owns
+
+---
+
+## Sister Plugin: hit-em-with-the-docs
+
+[`hit-em-with-the-docs`](https://github.com/TheGlitchKing/hit-em-with-the-docs) is the **canonical writer** of `./.documentation/`. It scaffolds, classifies, maintains, and validates docs across 15 domains with a 22-field metadata schema. Semantic Pages is the **canonical reader** — when both plugins are installed, Semantic Pages auto-wires a read-only index of `./.documentation/` so Claude can search it, traverse its wikilinks, and list/read docs without any write primitives exposed. That split keeps hewtd the sole authority for writes while giving you semantic discovery over the result.
+
+### The matrix
+
+| `semantic-pages` installed | `hit-em-with-the-docs` installed | Result |
+|---|---|---|
+| ✗ | ✗ | nothing |
+| ✗ | ✓ | hewtd CLI only; `.documentation/` managed but not indexed |
+| ✓ | ✗ | single MCP at `./.claude/.vault` (read/write, auto-created) |
+| ✓ | ✓ | `./.claude/.vault` (read/write) **+** `./.documentation` (read-only) |
+
+### How the auto-wire works
+
+Semantic Pages ships a `SessionStart` hook that runs at the start of every Claude Code session and reconciles the project's `.mcp.json`:
+
+1. Always ensures `./.claude/.vault/` exists (creates if missing)
+2. Always ensures a `semantic-vault` MCP entry pointed at `./.claude/.vault` (read/write — your personal research notes, session artifacts, scratch graph)
+3. If `hit-em-with-the-docs` is in your enabled plugins **and** `./.documentation/` exists in the current project → adds a `semantic-pages` MCP entry pointed at `./.documentation` with `--read-only` (the 7 write tools are suppressed at the MCP tool list level)
+4. If either condition stops being true → idempotently removes the `semantic-pages` entry (self-healing when you uninstall hewtd or the docs tree goes away)
+
+The hook is a no-op when the computed `.mcp.json` matches what's already on disk, so there's no git churn from repeated session starts. It only touches its own entries — any custom MCP servers you've added (playwright, custom tools, etc.) are left untouched. If you've manually defined a `semantic-pages` entry pointing at a non-`.documentation` path, the hook respects it and leaves it alone.
+
+### Why read-only for `.documentation/`
+
+`./.documentation/` is a **managed tree** — hewtd owns the lifecycle (creates files, classifies them, maintains frontmatter, prunes stale entries, checks links). If Semantic Pages also exposed `create_note`, `update_note`, `delete_note`, `move_note`, `update_frontmatter`, `manage_tags`, and `rename_tag` over that tree, you'd have two writers racing over the same schema and hewtd couldn't guarantee its invariants. Read-only gives you semantic discovery without that risk. Your personal `.claude/.vault/` stays fully read/write — hewtd doesn't touch it, so Semantic Pages is the sole writer there and all 21 tools are available.
+
+### The `--read-only` flag
+
+The auto-wire uses a new `--read-only` CLI flag (v0.6.0+) that filters out the 7 write tools from the MCP server's tool list at startup. You can use it manually anywhere:
+
+```bash
+semantic-pages --notes ./any-shared-vault --read-only
+```
+
+Only the 14 read tools are exposed (`search_*`, `read_note`, `read_multiple_notes`, `list_notes`, `backlinks`, `forwardlinks`, `graph_path`, `graph_statistics`, `get_frontmatter`, `get_stats`, `reindex`).
 
 ---
 
@@ -120,6 +162,24 @@ npm install --save-dev @theglitchking/semantic-pages
 }
 ```
 
+#### Method E: Claude Code Plugin (Recommended — zero config, auto-wires)
+
+This is the easiest path if you use Claude Code and want `.claude/.vault/` + (optionally) `.documentation/` indexed automatically.
+
+```bash
+# Inside a Claude Code session:
+/plugin marketplace add TheGlitchKing/semantic-pages
+/plugin install semantic-pages@semantic-pages-marketplace
+```
+
+What happens next session:
+1. A `SessionStart` hook runs and ensures `./.claude/.vault/` exists
+2. Your project's `.mcp.json` gets a `semantic-vault` entry pointed at `./.claude/.vault` (read/write)
+3. **If** `hit-em-with-the-docs` is also installed **and** `./.documentation/` exists → a second `semantic-pages` entry is added, pointed at `./.documentation` with `--read-only`
+4. You get 21 tools (14 if the docs server is the one being used) for semantic search, graph traversal, and (for the vault) note CRUD
+
+No manual `.mcp.json` editing. Uninstalling the plugin cleanly leaves your existing entries alone on the next session.
+
 ---
 
 ### 2. How to Use
@@ -515,7 +575,7 @@ src/
 
 **Frontmatter is optional.** Every note gets a modification timestamp regardless — resolved from frontmatter date fields if present, otherwise from the file's `fs.stat` mtime. When frontmatter fields like `status`, `tier`, `domains`, `load_priority`, or `purpose` are present, they're indexed and exposed through all search tools as filters and score boosters. Plain notes with no frontmatter work exactly as before.
 
-If you want structured frontmatter with a full schema (22 fields, 15 domains, health scoring), [**hit-em-with-the-docs**](https://github.com/TheGlitchKing/hit-em-with-the-docs) is a companion tool that manages docs for Claude Code projects — its schema is natively understood by Semantic Pages.
+If you want structured frontmatter with a full schema (22 fields, 15 domains, health scoring), [**hit-em-with-the-docs**](https://github.com/TheGlitchKing/hit-em-with-the-docs) is Semantic Pages' **sister plugin** (see [Sister Plugin: hit-em-with-the-docs](#sister-plugin-hit-em-with-the-docs) above). It manages `./.documentation/` as a writer-owned tree; Semantic Pages auto-wires a read-only index of it when both plugins are installed. All hewtd frontmatter fields are natively understood by the indexer.
 
 #### Step 2: Chunk
 ```

package/dist/cli/index.js

@@ -208,7 +208,7 @@ program.command("tools [name]").description("List all MCP tools, or show details
   }
   process.exit(0);
 });
-program.command("serve", { isDefault: true }).description("Start the MCP server (default command)").requiredOption("--notes <path>", "Path to markdown notes directory").option("--reindex", "Force full reindex and exit").option("--stats", "Show vault statistics and exit").option("--model <name>", "Embedding model to use (default: all-MiniLM-L6-v2, fast; use nomic-ai/nomic-embed-text-v1.5 for higher quality)").option("--workers <n>", "Number of worker threads for parallel embedding", parseInt).option("--batch-size <n>", "Texts per ONNX forward pass (default: 8)", parseInt).option("--no-quantized", "Use full-precision model instead of quantized (slower, slightly higher quality)").option("--no-watch", "Disable file watcher").action(async (opts) => {
+program.command("serve", { isDefault: true }).description("Start the MCP server (default command)").requiredOption("--notes <path>", "Path to markdown notes directory").option("--reindex", "Force full reindex and exit").option("--stats", "Show vault statistics and exit").option("--read-only", "Suppress write tools (create_note, update_note, delete_note, move_note, update_frontmatter, manage_tags, rename_tag) \u2014 use for shared docs vaults owned by another tool").option("--model <name>", "Embedding model to use (default: all-MiniLM-L6-v2, fast; use nomic-ai/nomic-embed-text-v1.5 for higher quality)").option("--workers <n>", "Number of worker threads for parallel embedding", parseInt).option("--batch-size <n>", "Texts per ONNX forward pass (default: 8)", parseInt).option("--no-quantized", "Use full-precision model instead of quantized (slower, slightly higher quality)").option("--no-watch", "Disable file watcher").action(async (opts) => {
   const notesPath = resolve(opts.notes);
   if (!existsSync(notesPath)) {
     console.error(`Error: notes directory not found: ${notesPath}`);
@@ -242,7 +242,14 @@ program.command("serve", { isDefault: true }).description("Start the MCP server
     process.exit(0);
   }
   const { startServer } = await import("../mcp/server.js");
-  await startServer(notesPath, { watch: opts.watch, model: opts.model, workers: opts.workers, batchSize: opts.batchSize, quantized: opts.quantized });
+  await startServer(notesPath, {
+    watch: opts.watch,
+    model: opts.model,
+    workers: opts.workers,
+    batchSize: opts.batchSize,
+    quantized: opts.quantized,
+    readOnly: opts.readOnly
+  });
 });
 program.parse();
 //# sourceMappingURL=index.js.map

package/dist/cli/index.js.map

@@ -1 +1 @@
-{"version":3,"sources":["../../src/cli/index.ts"],"sourcesContent":["#!/usr/bin/env node\n\nimport { program } from \"commander\";\nimport { resolve } from \"node:path\";\nimport { existsSync } from \"node:fs\";\n\nconst TOOL_HELP: Record<string, { description: string; args: string; examples: string[] }> = {\n  // Search\n  search_semantic: {\n    description: \"Vector similarity search — find notes by meaning, not just keywords\",\n    args: '{ \"query\": \"string\", \"limit?\": 10 }',\n    examples: [\n      '{ \"query\": \"microservices architecture\", \"limit\": 5 }',\n      '{ \"query\": \"how to deploy to production\" }',\n    ],\n  },\n  search_text: {\n    description: \"Full-text keyword or regex search with optional filters\",\n    args: '{ \"pattern\": \"string\", \"regex?\": false, \"caseSensitive?\": false, \"pathGlob?\": \"string\", \"tagFilter?\": [\"string\"], \"limit?\": 20 }',\n    examples: [\n      '{ \"pattern\": \"RabbitMQ\" }',\n      '{ \"pattern\": \"OAuth\\\\\\\\d\", \"regex\": true }',\n      '{ \"pattern\": \"deploy\", \"pathGlob\": \"devops/**\", \"tagFilter\": [\"kubernetes\"] }',\n    ],\n  },\n  search_graph: {\n    description: \"Graph traversal — find notes connected to a concept via wikilinks and tags\",\n    args: '{ \"concept\": \"string\", \"maxDepth?\": 2 }',\n    examples: [\n      '{ \"concept\": \"microservices\" }',\n      '{ \"concept\": \"auth\", \"maxDepth\": 3 }',\n    ],\n  },\n  search_hybrid: {\n    description: \"Combined semantic + graph search — vector results re-ranked by graph proximity\",\n    args: '{ \"query\": \"string\", \"limit?\": 10 }',\n    examples: [\n      '{ \"query\": \"event driven architecture\", \"limit\": 5 }',\n    ],\n  },\n\n  // Read\n  read_note: {\n    description: \"Read the full content of a specific note by path\",\n    args: '{ \"path\": \"string\" }',\n    examples: [\n      '{ \"path\": \"project-overview.md\" }',\n      '{ \"path\": \"notes/meeting-2024-01-15.md\" }',\n    ],\n  },\n  read_multiple_notes: {\n    description: \"Batch read multiple notes in one call\",\n    args: '{ \"paths\": [\"string\"] }',\n    examples: [\n      '{ \"paths\": [\"overview.md\", \"architecture.md\", \"deployment.md\"] }',\n    ],\n  },\n  list_notes: {\n    description: \"List all indexed notes with metadata (title, tags, link count)\",\n    args: \"{}\",\n    examples: [\"{}\"],\n  },\n\n  // Write\n  create_note: {\n    description: \"Create a new markdown note with optional YAML frontmatter\",\n    args: '{ \"path\": \"string\", \"content\": \"string\", \"frontmatter?\": {} }',\n    examples: [\n      '{ \"path\": \"new-guide.md\", \"content\": \"# Guide\\\\n\\\\nContent here.\" }',\n      '{ \"path\": \"tagged.md\", \"content\": \"Content.\", \"frontmatter\": { \"title\": \"Tagged Note\", \"tags\": [\"test\"] } }',\n    ],\n  },\n  update_note: {\n    description: \"Edit note content — overwrite, append, prepend, or patch by heading\",\n    args: '{ \"path\": \"string\", \"content\": \"string\", \"mode\": \"overwrite|append|prepend|patch-by-heading\", \"heading?\": \"string\" }',\n    examples: [\n      '{ \"path\": \"guide.md\", \"content\": \"New content.\", \"mode\": \"overwrite\" }',\n      '{ \"path\": \"guide.md\", \"content\": \"\\\\n## Appendix\\\\nExtra info.\", \"mode\": \"append\" }',\n      '{ \"path\": \"guide.md\", \"content\": \"Updated architecture section.\", \"mode\": \"patch-by-heading\", \"heading\": \"Architecture\" }',\n    ],\n  },\n  delete_note: {\n    description: \"Delete a note permanently (requires confirm=true)\",\n    args: '{ \"path\": \"string\", \"confirm\": true }',\n    examples: [\n      '{ \"path\": \"old-note.md\", \"confirm\": true }',\n      '{ \"path\": \"old-note.md\", \"confirm\": false }  // returns warning, does not delete',\n    ],\n  },\n  move_note: {\n    description: \"Move or rename a note — automatically updates wikilinks across the vault\",\n    args: '{ \"from\": \"string\", \"to\": \"string\" }',\n    examples: [\n      '{ \"from\": \"user-service.md\", \"to\": \"auth-service.md\" }',\n      '{ \"from\": \"old/note.md\", \"to\": \"new/location/note.md\" }',\n    ],\n  },\n\n  // Metadata\n  get_frontmatter: {\n    description: \"Read parsed YAML frontmatter from a note as JSON\",\n    args: '{ \"path\": \"string\" }',\n    examples: ['{ \"path\": \"project-overview.md\" }'],\n  },\n  update_frontmatter: {\n    description: \"Set or delete YAML frontmatter keys — pass null to delete a key\",\n    args: '{ \"path\": \"string\", \"fields\": {} }',\n    examples: [\n      '{ \"path\": \"note.md\", \"fields\": { \"status\": \"active\", \"priority\": 1 } }',\n      '{ \"path\": \"note.md\", \"fields\": { \"deprecated_field\": null } }  // deletes the key',\n    ],\n  },\n  manage_tags: {\n    description: \"Add, remove, or list tags on a note (frontmatter and inline)\",\n    args: '{ \"path\": \"string\", \"action\": \"add|remove|list\", \"tags?\": [\"string\"] }',\n    examples: [\n      '{ \"path\": \"note.md\", \"action\": \"list\" }',\n      '{ \"path\": \"note.md\", \"action\": \"add\", \"tags\": [\"important\", \"reviewed\"] }',\n      '{ \"path\": \"note.md\", \"action\": \"remove\", \"tags\": [\"draft\"] }',\n    ],\n  },\n  rename_tag: {\n    description: \"Rename a tag across all notes in the vault (frontmatter + inline)\",\n    args: '{ \"oldTag\": \"string\", \"newTag\": \"string\" }',\n    examples: ['{ \"oldTag\": \"architecture\", \"newTag\": \"arch\" }'],\n  },\n\n  // Graph\n  backlinks: {\n    description: \"Find all notes that link TO a given note via [[wikilinks]]\",\n    args: '{ \"path\": \"string\" }',\n    examples: ['{ \"path\": \"microservices.md\" }'],\n  },\n  forwardlinks: {\n    description: \"Find all notes linked FROM a given note\",\n    args: '{ \"path\": \"string\" }',\n    examples: ['{ \"path\": \"project-overview.md\" }'],\n  },\n  graph_path: {\n    description: \"Find the shortest path between two notes in the knowledge graph\",\n    args: '{ \"from\": \"string\", \"to\": \"string\" }',\n    examples: ['{ \"from\": \"project-overview.md\", \"to\": \"user-service.md\" }'],\n  },\n  graph_statistics: {\n    description: \"Knowledge graph stats — most connected nodes, orphans, density\",\n    args: \"{}\",\n    examples: [\"{}\"],\n  },\n\n  // System\n  get_stats: {\n    description: \"Vault and index statistics — note count, chunks, embeddings, graph density\",\n    args: \"{}\",\n    examples: [\"{}\"],\n  },\n  reindex: {\n    description: \"Force a full reindex of the vault\",\n    args: \"{}\",\n    examples: [\"{}\"],\n  },\n};\n\nconst TOOL_CATEGORIES: Record<string, string[]> = {\n  Search: [\"search_semantic\", \"search_text\", \"search_graph\", \"search_hybrid\"],\n  Read: [\"read_note\", \"read_multiple_notes\", \"list_notes\"],\n  Write: [\"create_note\", \"update_note\", \"delete_note\", \"move_note\"],\n  Metadata: [\"get_frontmatter\", \"update_frontmatter\", \"manage_tags\", \"rename_tag\"],\n  Graph: [\"backlinks\", \"forwardlinks\", \"graph_path\", \"graph_statistics\"],\n  System: [\"get_stats\", \"reindex\"],\n};\n\nfunction printToolList() {\n  console.log(\"\\nSemantic Pages — 21 MCP Tools\\n\");\n  console.log(\"Usage: These tools are available via MCP when the server is running.\");\n  console.log(\"       Run `semantic-pages tools <name>` for details on a specific tool.\\n\");\n\n  for (const [category, tools] of Object.entries(TOOL_CATEGORIES)) {\n    console.log(`  ${category}:`);\n    for (const name of tools) {\n      const tool = TOOL_HELP[name];\n      console.log(`    ${name.padEnd(24)} ${tool.description}`);\n    }\n    console.log();\n  }\n\n  console.log(\"Run `semantic-pages tools <tool-name>` for arguments and examples.\");\n}\n\nfunction printToolDetail(name: string) {\n  const tool = TOOL_HELP[name];\n  if (!tool) {\n    console.error(`Unknown tool: ${name}`);\n    console.error(`Run \\`semantic-pages tools\\` to see all available tools.`);\n    process.exit(1);\n  }\n\n  console.log(`\\n  ${name}`);\n  console.log(`  ${\"─\".repeat(name.length)}`);\n  console.log(`  ${tool.description}\\n`);\n  console.log(`  Arguments:`);\n  console.log(`    ${tool.args}\\n`);\n  console.log(`  Examples:`);\n  for (const ex of tool.examples) {\n    console.log(`    ${ex}`);\n  }\n  console.log();\n}\n\nprogram\n  .name(\"semantic-pages\")\n  .description(\n    \"Semantic search + knowledge graph MCP server for markdown files\\n\\n\" +\n    \"  Start MCP server:  semantic-pages --notes ./vault\\n\" +\n    \"  Show vault stats:  semantic-pages --notes ./vault --stats\\n\" +\n    \"  Force reindex:     semantic-pages --notes ./vault --reindex\\n\" +\n    \"  List MCP tools:    semantic-pages tools\\n\" +\n    \"  Tool details:      semantic-pages tools search_semantic\"\n  )\n  .version(\"0.4.3\");\n\nprogram\n  .command(\"tools [name]\")\n  .description(\"List all MCP tools, or show details for a specific tool\")\n  .action((name?: string) => {\n    if (name) {\n      printToolDetail(name);\n    } else {\n      printToolList();\n    }\n    process.exit(0);\n  });\n\nprogram\n  .command(\"serve\", { isDefault: true })\n  .description(\"Start the MCP server (default command)\")\n  .requiredOption(\"--notes <path>\", \"Path to markdown notes directory\")\n  .option(\"--reindex\", \"Force full reindex and exit\")\n  .option(\"--stats\", \"Show vault statistics and exit\")\n  .option(\"--model <name>\", \"Embedding model to use (default: all-MiniLM-L6-v2, fast; use nomic-ai/nomic-embed-text-v1.5 for higher quality)\")\n  .option(\"--workers <n>\", \"Number of worker threads for parallel embedding\", parseInt)\n  .option(\"--batch-size <n>\", \"Texts per ONNX forward pass (default: 8)\", parseInt)\n  .option(\"--no-quantized\", \"Use full-precision model instead of quantized (slower, slightly higher quality)\")\n  .option(\"--no-watch\", \"Disable file watcher\")\n  .action(async (opts) => {\n    const notesPath = resolve(opts.notes);\n\n    if (!existsSync(notesPath)) {\n      console.error(`Error: notes directory not found: ${notesPath}`);\n      process.exit(1);\n    }\n\n    if (opts.stats) {\n      const { Indexer } = await import(\"../core/indexer.js\");\n      const indexer = new Indexer(notesPath);\n      const docs = await indexer.indexAll();\n      console.log(`Notes: ${docs.length}`);\n      console.log(`Chunks: ${docs.reduce((n: number, d: any) => n + d.chunks.length, 0)}`);\n      console.log(`Wikilinks: ${docs.reduce((n: number, d: any) => n + d.wikilinks.length, 0)}`);\n      console.log(`Tags: ${new Set(docs.flatMap((d: any) => d.tags)).size} unique`);\n      process.exit(0);\n    }\n\n    if (opts.reindex) {\n      const { createServer } = await import(\"../mcp/server.js\");\n      await createServer(notesPath, {\n        watch: false,\n        waitForReady: true,\n        model: opts.model,\n        workers: opts.workers,\n        batchSize: opts.batchSize,\n        quantized: opts.quantized,\n        onProgress: (embedded, total) => {\n          process.stderr.write(`\\rEmbedding ${embedded}/${total} chunks...`);\n        },\n      });\n      process.stderr.write(\"\\n\");\n      console.log(\"Reindex complete.\");\n      process.exit(0);\n    }\n\n    // Default: start MCP server on stdio\n    const { startServer } = await import(\"../mcp/server.js\");\n    await startServer(notesPath, { watch: opts.watch, model: opts.model, workers: opts.workers, batchSize: opts.batchSize, quantized: opts.quantized });\n  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\"string\" }',\n    examples: [\n      '{ \"from\": \"user-service.md\", \"to\": \"auth-service.md\" }',\n      '{ \"from\": \"old/note.md\", \"to\": \"new/location/note.md\" }',\n    ],\n  },\n\n  // Metadata\n  get_frontmatter: {\n    description: \"Read parsed YAML frontmatter from a note as JSON\",\n    args: '{ \"path\": \"string\" }',\n    examples: ['{ \"path\": \"project-overview.md\" }'],\n  },\n  update_frontmatter: {\n    description: \"Set or delete YAML frontmatter keys — pass null to delete a key\",\n    args: '{ \"path\": \"string\", \"fields\": {} }',\n    examples: [\n      '{ \"path\": \"note.md\", \"fields\": { \"status\": \"active\", \"priority\": 1 } }',\n      '{ \"path\": \"note.md\", \"fields\": { \"deprecated_field\": null } }  // deletes the key',\n    ],\n  },\n  manage_tags: {\n    description: \"Add, remove, or list tags on a note (frontmatter and inline)\",\n    args: '{ \"path\": \"string\", \"action\": \"add|remove|list\", \"tags?\": [\"string\"] }',\n   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tools.`);\n    process.exit(1);\n  }\n\n  console.log(`\\n  ${name}`);\n  console.log(`  ${\"─\".repeat(name.length)}`);\n  console.log(`  ${tool.description}\\n`);\n  console.log(`  Arguments:`);\n  console.log(`    ${tool.args}\\n`);\n  console.log(`  Examples:`);\n  for (const ex of tool.examples) {\n    console.log(`    ${ex}`);\n  }\n  console.log();\n}\n\nprogram\n  .name(\"semantic-pages\")\n  .description(\n    \"Semantic search + knowledge graph MCP server for markdown files\\n\\n\" +\n    \"  Start MCP server:  semantic-pages --notes ./vault\\n\" +\n    \"  Show vault stats:  semantic-pages --notes ./vault --stats\\n\" +\n    \"  Force reindex:     semantic-pages --notes ./vault --reindex\\n\" +\n    \"  List MCP tools:    semantic-pages tools\\n\" +\n    \"  Tool details:      semantic-pages tools search_semantic\"\n  )\n  .version(\"0.4.3\");\n\nprogram\n  .command(\"tools [name]\")\n  .description(\"List all MCP tools, or show details for a specific tool\")\n  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.option(\"--no-quantized\", \"Use full-precision model instead of quantized (slower, slightly higher quality)\")\n  .option(\"--no-watch\", \"Disable file watcher\")\n  .action(async (opts) => {\n    const notesPath = resolve(opts.notes);\n\n    if (!existsSync(notesPath)) {\n      console.error(`Error: notes directory not found: ${notesPath}`);\n      process.exit(1);\n    }\n\n    if (opts.stats) {\n      const { Indexer } = await import(\"../core/indexer.js\");\n      const indexer = new Indexer(notesPath);\n      const docs = await indexer.indexAll();\n      console.log(`Notes: ${docs.length}`);\n      console.log(`Chunks: ${docs.reduce((n: number, d: any) => n + d.chunks.length, 0)}`);\n      console.log(`Wikilinks: ${docs.reduce((n: number, d: any) => n + d.wikilinks.length, 0)}`);\n      console.log(`Tags: ${new Set(docs.flatMap((d: any) => d.tags)).size} unique`);\n      process.exit(0);\n    }\n\n    if (opts.reindex) {\n      const { createServer } = await import(\"../mcp/server.js\");\n      await createServer(notesPath, {\n        watch: false,\n        waitForReady: true,\n        model: opts.model,\n        workers: opts.workers,\n        batchSize: opts.batchSize,\n        quantized: opts.quantized,\n        onProgress: (embedded, total) => {\n          process.stderr.write(`\\rEmbedding ${embedded}/${total} chunks...`);\n        },\n      });\n      process.stderr.write(\"\\n\");\n      console.log(\"Reindex complete.\");\n      process.exit(0);\n    }\n\n    // Default: start MCP server on stdio\n    const { startServer } = await import(\"../mcp/server.js\");\n    await startServer(notesPath, {\n      watch: opts.watch,\n      model: opts.model,\n      workers: opts.workers,\n      batchSize: opts.batchSize,\n      quantized: opts.quantized,\n      readOnly: opts.readOnly,\n    });\n  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package/dist/mcp/server.d.ts

@@ -7,6 +7,7 @@ interface ServerOptions {
     workers?: number;
     batchSize?: number;
     quantized?: boolean;
+    readOnly?: boolean;
     onProgress?: (embedded: number, total: number) => void;
 }
 declare function createServer(notesPath: string, options?: ServerOptions): Promise<McpServer>;

package/dist/mcp/server.js

@@ -4393,52 +4393,54 @@ async function createServer(notesPath, options = {}) {
       return textResponse(JSON.stringify(list, null, 2));
     }
   );
-  server.tool(
-    "create_note",
-    "Create a new markdown note",
-    {
-      path: external_exports.string(),
-      content: external_exports.string(),
-      frontmatter: external_exports.record(external_exports.unknown()).optional()
-    },
-    async ({ path, content, frontmatter }) => {
-      await crud.create(path, content, frontmatter);
-      return textResponse(`Created: ${path}`);
-    }
-  );
-  server.tool(
-    "update_note",
-    "Edit note content \u2014 overwrite, append, prepend, or patch by heading",
-    {
-      path: external_exports.string(),
-      content: external_exports.string(),
-      mode: external_exports.enum(["overwrite", "append", "prepend", "patch-by-heading"]),
-      heading: external_exports.string().optional()
-    },
-    async ({ path, content, mode, heading }) => {
-      await crud.update(path, content, { mode, heading });
-      return textResponse(`Updated: ${path} (${mode})`);
-    }
-  );
-  server.tool(
-    "delete_note",
-    "Delete a note permanently",
-    { path: external_exports.string(), confirm: external_exports.boolean().default(false) },
-    async ({ path, confirm }) => {
-      if (!confirm) return textResponse(`Set confirm=true to delete ${path}`);
-      await crud.delete(path);
-      return textResponse(`Deleted: ${path}`);
-    }
-  );
-  server.tool(
-    "move_note",
-    "Move or rename a note \u2014 updates wikilinks across the vault",
-    { from: external_exports.string(), to: external_exports.string() },
-    async ({ from, to }) => {
-      await crud.move(from, to);
-      return textResponse(`Moved: ${from} \u2192 ${to}`);
-    }
-  );
+  if (!options.readOnly) {
+    server.tool(
+      "create_note",
+      "Create a new markdown note",
+      {
+        path: external_exports.string(),
+        content: external_exports.string(),
+        frontmatter: external_exports.record(external_exports.unknown()).optional()
+      },
+      async ({ path, content, frontmatter }) => {
+        await crud.create(path, content, frontmatter);
+        return textResponse(`Created: ${path}`);
+      }
+    );
+    server.tool(
+      "update_note",
+      "Edit note content \u2014 overwrite, append, prepend, or patch by heading",
+      {
+        path: external_exports.string(),
+        content: external_exports.string(),
+        mode: external_exports.enum(["overwrite", "append", "prepend", "patch-by-heading"]),
+        heading: external_exports.string().optional()
+      },
+      async ({ path, content, mode, heading }) => {
+        await crud.update(path, content, { mode, heading });
+        return textResponse(`Updated: ${path} (${mode})`);
+      }
+    );
+    server.tool(
+      "delete_note",
+      "Delete a note permanently",
+      { path: external_exports.string(), confirm: external_exports.boolean().default(false) },
+      async ({ path, confirm }) => {
+        if (!confirm) return textResponse(`Set confirm=true to delete ${path}`);
+        await crud.delete(path);
+        return textResponse(`Deleted: ${path}`);
+      }
+    );
+    server.tool(
+      "move_note",
+      "Move or rename a note \u2014 updates wikilinks across the vault",
+      { from: external_exports.string(), to: external_exports.string() },
+      async ({ from, to }) => {
+        await crud.move(from, to);
+        return textResponse(`Moved: ${from} \u2192 ${to}`);
+      }
+    );
+  }
   server.tool(
     "get_frontmatter",
     "Read parsed YAML frontmatter from a note as JSON",
@@ -4448,51 +4450,53 @@ async function createServer(notesPath, options = {}) {
       return textResponse(JSON.stringify(fm, null, 2));
     }
   );
-  server.tool(
-    "update_frontmatter",
-    "Set or delete YAML frontmatter keys \u2014 pass null to delete a key",
-    { path: external_exports.string(), fields: external_exports.record(external_exports.unknown()) },
-    async ({ path, fields }) => {
-      await frontmatterManager.update(path, fields);
-      return textResponse(`Frontmatter updated: ${path}`);
-    }
-  );
-  server.tool(
-    "manage_tags",
-    "Add, remove, or list tags on a note (frontmatter and inline)",
-    {
-      path: external_exports.string(),
-      action: external_exports.enum(["add", "remove", "list"]),
-      tags: external_exports.array(external_exports.string()).optional()
-    },
-    async ({ path, action, tags }) => {
-      switch (action) {
-        case "list": {
-          const result = await tagManager.list(path);
-          return textResponse(JSON.stringify(result));
-        }
-        case "add": {
-          if (!tags?.length) return textResponse("No tags provided");
-          await tagManager.add(path, tags);
-          return textResponse(`Added tags to ${path}: ${tags.join(", ")}`);
-        }
-        case "remove": {
-          if (!tags?.length) return textResponse("No tags provided");
-          await tagManager.remove(path, tags);
-          return textResponse(`Removed tags from ${path}: ${tags.join(", ")}`);
+  if (!options.readOnly) {
+    server.tool(
+      "update_frontmatter",
+      "Set or delete YAML frontmatter keys \u2014 pass null to delete a key",
+      { path: external_exports.string(), fields: external_exports.record(external_exports.unknown()) },
+      async ({ path, fields }) => {
+        await frontmatterManager.update(path, fields);
+        return textResponse(`Frontmatter updated: ${path}`);
+      }
+    );
+    server.tool(
+      "manage_tags",
+      "Add, remove, or list tags on a note (frontmatter and inline)",
+      {
+        path: external_exports.string(),
+        action: external_exports.enum(["add", "remove", "list"]),
+        tags: external_exports.array(external_exports.string()).optional()
+      },
+      async ({ path, action, tags }) => {
+        switch (action) {
+          case "list": {
+            const result = await tagManager.list(path);
+            return textResponse(JSON.stringify(result));
+          }
+          case "add": {
+            if (!tags?.length) return textResponse("No tags provided");
+            await tagManager.add(path, tags);
+            return textResponse(`Added tags to ${path}: ${tags.join(", ")}`);
+          }
+          case "remove": {
+            if (!tags?.length) return textResponse("No tags provided");
+            await tagManager.remove(path, tags);
+            return textResponse(`Removed tags from ${path}: ${tags.join(", ")}`);
+          }
         }
       }
-    }
-  );
-  server.tool(
-    "rename_tag",
-    "Rename a tag across all notes in the vault",
-    { oldTag: external_exports.string(), newTag: external_exports.string() },
-    async ({ oldTag, newTag }) => {
-      const count = await tagManager.renameVaultWide(oldTag, newTag);
-      return textResponse(`Renamed #${oldTag} \u2192 #${newTag} in ${count} files`);
-    }
-  );
+    );
+    server.tool(
+      "rename_tag",
+      "Rename a tag across all notes in the vault",
+      { oldTag: external_exports.string(), newTag: external_exports.string() },
+      async ({ oldTag, newTag }) => {
+        const count = await tagManager.renameVaultWide(oldTag, newTag);
+        return textResponse(`Renamed #${oldTag} \u2192 #${newTag} in ${count} files`);
+      }
+    );
+  }
   server.tool(
     "backlinks",
     "Find all notes that link TO a given note",