@theglitchking/hit-em-with-the-docs 2.3.0 → 2.5.0

package/dist/core/knowledge-base/fix-legacy-layout.js

@@ -0,0 +1,189 @@
+/**
+ * Migrate 2.3.0-buggy incident folders into the canonical layout (2.4.0).
+ *
+ * In 2.3.0, `hewtd migrate-incident <flat-file>` wrote the new folder
+ * AS A SIBLING of the flat file. When the flat file lived at the vault
+ * root (the documented example), the resulting folder ended up at
+ * `<vault-root>/<slug>/` instead of `<vault-root>/incidents/<slug>/`.
+ * The `incidents/INDEX.md` generator scans only the canonical path, so
+ * those folders were silently absent from the index.
+ *
+ * This module:
+ *   1. Detects legacy folders — anything matching `<vault-root>/<slug>/`
+ *      that contains a valid `narrative.md` AND isn't already under the
+ *      canonical `<vault-root>/incidents/` parent.
+ *   2. Moves them into `<vault-root>/incidents/<slug>/` (preserving any
+ *      `facts.md` / `evidence/` contents).
+ *   3. Rewrites `provenance:` references in any `<vault-root>/facts/*.md`
+ *      files that pointed at the old folder paths.
+ *
+ * Idempotent: re-running on a clean vault is a no-op with a status report.
+ */
+import { readFile, writeFile, rename, mkdir, readdir, stat } from 'fs/promises';
+import { existsSync } from 'fs';
+import { join, relative } from 'path';
+import matter from 'gray-matter';
+/**
+ * Discover and (optionally) relocate 2.3.0-layout incident folders.
+ */
+export async function fixLegacyLayout(options) {
+    const { vaultRoot, projectRoot, dryRun = false } = options;
+    const result = {
+        vaultRoot,
+        moved: [],
+        rewrittenProvenance: [],
+        skipped: [],
+        action: 'no_op',
+    };
+    if (!existsSync(vaultRoot)) {
+        return result;
+    }
+    // Walk one level deep under vaultRoot, looking for `<slug>/narrative.md`
+    // entries that are NOT inside `incidents/`, `facts/`, or `symptoms/`.
+    const RESERVED_DIRS = new Set(['incidents', 'facts', 'symptoms']);
+    const topLevel = await readdir(vaultRoot, { withFileTypes: true });
+    const legacyCandidates = [];
+    for (const entry of topLevel) {
+        if (!entry.isDirectory())
+            continue;
+        if (RESERVED_DIRS.has(entry.name))
+            continue;
+        const folderPath = join(vaultRoot, entry.name);
+        const narrativePath = join(folderPath, 'narrative.md');
+        if (!existsSync(narrativePath)) {
+            continue;
+        }
+        // Confirm this is genuinely an incident folder by reading the narrative
+        // frontmatter — protects against false positives (e.g. user-created
+        // folders that happen to contain a narrative.md from some other context).
+        const isIncident = await looksLikeIncidentFolder(narrativePath);
+        if (!isIncident) {
+            result.skipped.push({
+                path: folderPath,
+                reason: 'narrative.md present but tier is not "incident-narrative"',
+            });
+            continue;
+        }
+        legacyCandidates.push({
+            slug: entry.name,
+            from: folderPath,
+            to: join(vaultRoot, 'incidents', entry.name),
+        });
+    }
+    if (legacyCandidates.length === 0) {
+        return result;
+    }
+    // Build the provenance-rewrite plan FIRST (before moving anything) so
+    // we can reason about it. Old refs look like:
+    //   `<rel-vault>/2026-04-23-foo/` (no `incidents/`)
+    // New refs:
+    //   `<rel-vault>/incidents/2026-04-23-foo/`
+    const factsDir = join(vaultRoot, 'facts');
+    const provenanceRewrites = [];
+    if (existsSync(factsDir)) {
+        const factFiles = await readdir(factsDir);
+        for (const factFile of factFiles) {
+            if (!factFile.endsWith('.md'))
+                continue;
+            if (factFile === 'INDEX.md')
+                continue;
+            const factPath = join(factsDir, factFile);
+            const factStat = await stat(factPath);
+            if (!factStat.isFile())
+                continue;
+            const factRaw = await readFile(factPath, 'utf-8');
+            const factParsed = matter(factRaw);
+            const provenance = factParsed.data.provenance;
+            if (!Array.isArray(provenance))
+                continue;
+            let didRewrite = false;
+            const newProvenance = [];
+            for (const ref of provenance) {
+                if (typeof ref !== 'string') {
+                    newProvenance.push(ref);
+                    continue;
+                }
+                let rewritten = ref;
+                for (const candidate of legacyCandidates) {
+                    // Generate possible old-ref shapes and rewrite.
+                    // - relative from project root: `<rel-vault>/<slug>/`
+                    // - bare slug + trailing slash: `<slug>/`
+                    // - bare slug no slash: `<slug>`
+                    const relOld = `${relative(projectRoot, candidate.from)}/`;
+                    const relNew = `${relative(projectRoot, candidate.to)}/`;
+                    if (ref === relOld || ref === relOld.slice(0, -1)) {
+                        rewritten = relNew;
+                        break;
+                    }
+                    if (ref === `${candidate.slug}/` || ref === candidate.slug) {
+                        // Bare-slug reference; rewrite to the canonical relative path.
+                        rewritten = relNew;
+                        break;
+                    }
+                }
+                if (rewritten !== ref) {
+                    didRewrite = true;
+                    provenanceRewrites.push({
+                        factPath,
+                        oldRef: ref,
+                        newRef: rewritten,
+                    });
+                }
+                newProvenance.push(rewritten);
+            }
+            if (didRewrite && !dryRun) {
+                const newData = { ...factParsed.data, provenance: newProvenance };
+                await writeFile(factPath, matter.stringify(factParsed.content, newData), 'utf-8');
+            }
+        }
+    }
+    // Now do the actual folder moves (if not dry-run). Ensure incidents/
+    // parent dir exists first.
+    if (!dryRun) {
+        const incidentsParent = join(vaultRoot, 'incidents');
+        await mkdir(incidentsParent, { recursive: true });
+        for (const candidate of legacyCandidates) {
+            // Refuse to clobber an existing folder at the destination.
+            if (existsSync(candidate.to)) {
+                result.skipped.push({
+                    path: candidate.from,
+                    reason: `destination already exists at ${candidate.to}; manual merge required`,
+                });
+                continue;
+            }
+            await rename(candidate.from, candidate.to);
+            result.moved.push(candidate);
+        }
+    }
+    else {
+        // Dry-run: report what WOULD be moved without doing it.
+        for (const candidate of legacyCandidates) {
+            if (existsSync(candidate.to)) {
+                result.skipped.push({
+                    path: candidate.from,
+                    reason: `destination already exists at ${candidate.to}; manual merge required`,
+                });
+                continue;
+            }
+            result.moved.push(candidate);
+        }
+    }
+    result.rewrittenProvenance = provenanceRewrites;
+    result.action = dryRun
+        ? 'dry_run'
+        : result.moved.length > 0 || provenanceRewrites.length > 0
+            ? 'fixed'
+            : 'no_op';
+    return result;
+}
+async function looksLikeIncidentFolder(narrativePath) {
+    try {
+        const content = await readFile(narrativePath, 'utf-8');
+        const { data } = matter(content);
+        return data.tier === 'incident-narrative';
+    }
+    catch {
+        return false;
+    }
+}
+//# sourceMappingURL=fix-legacy-layout.js.map

package/dist/core/knowledge-base/fix-legacy-layout.js.map

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package/dist/core/knowledge-base/migrate.d.ts

@@ -1,26 +1,60 @@
 /**
- * Flat-file incident → folder migration (2.3.0 PR3).
+ * Flat-file incident → folder migration (2.3.0 PR3, target-path fix in 2.4.0).
  *
- * Reads a legacy flat-file incident (e.g. `knowledge-base/2026-04-23-foo.md`)
- * and converts it into the folder form:
+ * Reads a legacy flat-file incident and converts it into the folder form
+ * AT THE CANONICAL VAULT LOCATION:
  *
- *   <flat-file>.md  →  <slug>/narrative.md
- *                      <slug>/facts.md (skeleton)
- *                      <slug>/evidence/ (empty, ready for artifacts)
+ *   <flat-file>.md  →  <vault-root>/incidents/<slug>/narrative.md
+ *                      <vault-root>/incidents/<slug>/facts.md (skeleton)
+ *                      <vault-root>/incidents/<slug>/evidence/ (empty)
  *
- * Idempotent: re-running on an already-migrated incident detects the folder
- * exists and warns + no-ops.
+ * In 2.3.0 the target was derived from the flat file's parent directory,
+ * which produced folders OUTSIDE `<vault-root>/incidents/` when the source
+ * was at the vault root. The `incidents/INDEX.md` generator scans only
+ * `<vault-root>/incidents/<slug>/narrative.md` and silently missed those
+ * folders. 2.4.0 fixes this by always writing under `<vault-root>/incidents/`.
+ *
+ * Idempotency:
+ *   - If a valid `narrative.md` exists at EITHER the new path (canonical)
+ *     OR the legacy path (`<source-parent>/<slug>/narrative.md`), the
+ *     migration is treated as already done — no-op unless `--force`.
+ *   - This protects against double-migration and is robust against
+ *     consumers who already migrated under the 2.3.0 buggy layout.
+ *
+ * For consumers stuck on the 2.3.0 buggy layout, see `fixLegacyLayout()`
+ * which moves stale folders into `<vault-root>/incidents/` and rewrites
+ * any fact `provenance:` references.
  */
 export interface MigrateIncidentOptions {
     /** Absolute path to the flat-file incident markdown. */
     flatFilePath: string;
+    /**
+     * Absolute path to the vault root. The migrated folder lands at
+     * `<vaultRoot>/incidents/<slug>/`. Required since 2.4.0 — the 2.3.0
+     * "sibling of the flat file" behavior was the source of the path bug.
+     */
+    vaultRoot: string;
     /** If true, returns the migration plan without writing. */
     dryRun?: boolean;
+    /**
+     * If true, proceed with migration even if a folder already exists at
+     * the canonical or legacy location. Used to recover from a partial
+     * migration.
+     */
+    force?: boolean;
 }
 export interface MigrateIncidentResult {
     flatFilePath: string;
+    /** The canonical target — always under `<vaultRoot>/incidents/`. */
     targetFolder: string;
     action: 'migrated' | 'already_migrated' | 'dry_run';
+    /**
+     * Populated when `action === 'already_migrated'` to indicate WHERE the
+     * existing migration was found. `'new'` = canonical `<vault>/incidents/`;
+     * `'legacy'` = 2.3.0-style sibling-of-flat-file location. Helps consumers
+     * decide whether to run `fix-legacy-layout`.
+     */
+    existingLocation?: 'new' | 'legacy';
     narrativePath: string;
     factsPath: string;
     evidencePath: string;

package/dist/core/knowledge-base/migrate.d.ts.map

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+{"version":3,"file":"migrate.d.ts","sourceRoot":"","sources":["../../../src/core/knowledge-base/migrate.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;GA0BG;AAOH,MAAM,WAAW,sBAAsB;IACrC,wDAAwD;IACxD,YAAY,EAAE,MAAM,CAAC;IACrB;;;;OAIG;IACH,SAAS,EAAE,MAAM,CAAC;IAClB,2DAA2D;IAC3D,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB;;;;OAIG;IACH,KAAK,CAAC,EAAE,OAAO,CAAC;CACjB;AAED,MAAM,WAAW,qBAAqB;IACpC,YAAY,EAAE,MAAM,CAAC;IACrB,oEAAoE;IACpE,YAAY,EAAE,MAAM,CAAC;IACrB,MAAM,EAAE,UAAU,GAAG,kBAAkB,GAAG,SAAS,CAAC;IACpD;;;;;OAKG;IACH,gBAAgB,CAAC,EAAE,KAAK,GAAG,QAAQ,CAAC;IACpC,aAAa,EAAE,MAAM,CAAC;IACtB,SAAS,EAAE,MAAM,CAAC;IAClB,YAAY,EAAE,MAAM,CAAC;IACrB,6CAA6C;IAC7C,gBAAgB,EAAE,MAAM,CAAC;IACzB,yCAAyC;IACzC,YAAY,EAAE,MAAM,CAAC;CACtB;AAED,wBAAsB,eAAe,CACnC,OAAO,EAAE,sBAAsB,GAC9B,OAAO,CAAC,qBAAqB,CAAC,CA8HhC"}

package/dist/core/knowledge-base/migrate.js

@@ -1,22 +1,36 @@
 /**
- * Flat-file incident → folder migration (2.3.0 PR3).
+ * Flat-file incident → folder migration (2.3.0 PR3, target-path fix in 2.4.0).
  *
- * Reads a legacy flat-file incident (e.g. `knowledge-base/2026-04-23-foo.md`)
- * and converts it into the folder form:
+ * Reads a legacy flat-file incident and converts it into the folder form
+ * AT THE CANONICAL VAULT LOCATION:
  *
- *   <flat-file>.md  →  <slug>/narrative.md
- *                      <slug>/facts.md (skeleton)
- *                      <slug>/evidence/ (empty, ready for artifacts)
+ *   <flat-file>.md  →  <vault-root>/incidents/<slug>/narrative.md
+ *                      <vault-root>/incidents/<slug>/facts.md (skeleton)
+ *                      <vault-root>/incidents/<slug>/evidence/ (empty)
  *
- * Idempotent: re-running on an already-migrated incident detects the folder
- * exists and warns + no-ops.
+ * In 2.3.0 the target was derived from the flat file's parent directory,
+ * which produced folders OUTSIDE `<vault-root>/incidents/` when the source
+ * was at the vault root. The `incidents/INDEX.md` generator scans only
+ * `<vault-root>/incidents/<slug>/narrative.md` and silently missed those
+ * folders. 2.4.0 fixes this by always writing under `<vault-root>/incidents/`.
+ *
+ * Idempotency:
+ *   - If a valid `narrative.md` exists at EITHER the new path (canonical)
+ *     OR the legacy path (`<source-parent>/<slug>/narrative.md`), the
+ *     migration is treated as already done — no-op unless `--force`.
+ *   - This protects against double-migration and is robust against
+ *     consumers who already migrated under the 2.3.0 buggy layout.
+ *
+ * For consumers stuck on the 2.3.0 buggy layout, see `fixLegacyLayout()`
+ * which moves stale folders into `<vault-root>/incidents/` and rewrites
+ * any fact `provenance:` references.
  */
 import { readFile, writeFile, mkdir, rename } from 'fs/promises';
 import { existsSync } from 'fs';
 import { basename, dirname, join } from 'path';
 import matter from 'gray-matter';
 export async function migrateIncident(options) {
-    const { flatFilePath, dryRun = false } = options;
+    const { flatFilePath, vaultRoot, dryRun = false, force = false } = options;
     const sourceContent = await readFile(flatFilePath, 'utf-8');
     const parsed = matter(sourceContent);
     const fm = (parsed.data ?? {});
@@ -28,11 +42,14 @@ export async function migrateIncident(options) {
     const folderSlug = idFromFrontmatter && /^\d{4}-\d{2}-\d{2}-[a-z0-9-]+$/.test(idFromFrontmatter)
         ? idFromFrontmatter
         : flatBase;
-    const parentDir = dirname(flatFilePath);
-    const targetFolder = join(parentDir, folderSlug);
+    // Canonical target: <vault-root>/incidents/<slug>/
+    const targetFolder = join(vaultRoot, 'incidents', folderSlug);
     const narrativePath = join(targetFolder, 'narrative.md');
     const factsPath = join(targetFolder, 'facts.md');
     const evidencePath = join(targetFolder, 'evidence');
+    // Legacy 2.3.0 location: <source-parent>/<slug>/
+    const legacyTargetFolder = join(dirname(flatFilePath), folderSlug);
+    const legacyNarrativePath = join(legacyTargetFolder, 'narrative.md');
     // Build narrative.md frontmatter — promote/normalize fields, set tier.
     const narrativeFrontmatter = {
         title: fm.title ?? flatBase,
@@ -62,18 +79,35 @@ export async function migrateIncident(options) {
         produced: [],
     };
     const factsContent = matter.stringify(`\n# Facts from ${folderSlug}\n\n## Produced\n_(No facts extracted yet. Use \`hewtd extract-facts ${folderSlug}/\` to propose facts from the narrative.)_\n`, factsFrontmatter);
-    // Idempotency check: if target folder already exists, no-op.
-    if (existsSync(targetFolder)) {
-        return {
-            flatFilePath,
-            targetFolder,
-            action: 'already_migrated',
-            narrativePath,
-            factsPath,
-            evidencePath,
-            narrativeContent,
-            factsContent,
-        };
+    // Idempotency check (unless --force): check BOTH new and legacy locations
+    // for an existing valid migration.
+    if (!force) {
+        if (existsSync(narrativePath)) {
+            return {
+                flatFilePath,
+                targetFolder,
+                action: 'already_migrated',
+                existingLocation: 'new',
+                narrativePath,
+                factsPath,
+                evidencePath,
+                narrativeContent,
+                factsContent,
+            };
+        }
+        if (existsSync(legacyNarrativePath)) {
+            return {
+                flatFilePath,
+                targetFolder,
+                action: 'already_migrated',
+                existingLocation: 'legacy',
+                narrativePath: legacyNarrativePath,
+                factsPath: join(legacyTargetFolder, 'facts.md'),
+                evidencePath: join(legacyTargetFolder, 'evidence'),
+                narrativeContent,
+                factsContent,
+            };
+        }
     }
     if (dryRun) {
         return {
@@ -87,7 +121,8 @@ export async function migrateIncident(options) {
             factsContent,
         };
     }
-    // Execute the migration.
+    // Ensure the canonical parent (<vault>/incidents/) exists. Generator
+    // already handles a missing dir; we should too.
     await mkdir(evidencePath, { recursive: true }); // also creates targetFolder
     await writeFile(narrativePath, narrativeContent, 'utf-8');
     await writeFile(factsPath, factsContent, 'utf-8');

package/dist/core/knowledge-base/migrate.js.map

@@ -1 +1 @@
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+{"version":3,"file":"migrate.js","sourceRoot":"","sources":["../../../src/core/knowledge-base/migrate.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;GA0BG;AAEH,OAAO,EAAE,QAAQ,EAAE,SAAS,EAAE,KAAK,EAAE,MAAM,EAAE,MAAM,aAAa,CAAC;AACjE,OAAO,EAAE,UAAU,EAAE,MAAM,IAAI,CAAC;AAChC,OAAO,EAAE,QAAQ,EAAE,OAAO,EAAE,IAAI,EAAE,MAAM,MAAM,CAAC;AAC/C,OAAO,MAAM,MAAM,aAAa,CAAC;AA0CjC,MAAM,CAAC,KAAK,UAAU,eAAe,CACnC,OAA+B;IAE/B,MAAM,EAAE,YAAY,EAAE,SAAS,EAAE,MAAM,GAAG,KAAK,EAAE,KAAK,GAAG,KAAK,EAAE,GAAG,OAAO,CAAC;IAE3E,MAAM,aAAa,GAAG,MAAM,QAAQ,CAAC,YAAY,EAAE,OAAO,CAAC,CAAC;IAC5D,MAAM,MAAM,GAAG,MAAM,CAAC,aAAa,CAAC,CAAC;IACrC,MAAM,EAAE,GAAG,CAAC,MAAM,CAAC,IAAI,IAAI,EAAE,CAA4B,CAAC;IAE1D,2CAA2C;IAC3C,oDAAoD;IACpD,4CAA4C;IAC5C,MAAM,QAAQ,GAAG,QAAQ,CAAC,YAAY,EAAE,KAAK,CAAC,CAAC;IAC/C,MAAM,iBAAiB,GAAG,OAAO,EAAE,CAAC,EAAE,KAAK,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,CAAC,SAAS,CAAC;IACxE,MAAM,UAAU,GACd,iBAAiB,IAAI,gCAAgC,CAAC,IAAI,CAAC,iBAAiB,CAAC;QAC3E,CAAC,CAAC,iBAAiB;QACnB,CAAC,CAAC,QAAQ,CAAC;IAEf,mDAAmD;IACnD,MAAM,YAAY,GAAG,IAAI,CAAC,SAAS,EAAE,WAAW,EAAE,UAAU,CAAC,CAAC;IAC9D,MAAM,aAAa,GAAG,IAAI,CAAC,YAAY,EAAE,cAAc,CAAC,CAAC;IACzD,MAAM,SAAS,GAAG,IAAI,CAAC,YAAY,EAAE,UAAU,CAAC,CAAC;IACjD,MAAM,YAAY,GAAG,IAAI,CAAC,YAAY,EAAE,UAAU,CAAC,CAAC;IAEpD,iDAAiD;IACjD,MAAM,kBAAkB,GAAG,IAAI,CAAC,OAAO,CAAC,YAAY,CAAC,EAAE,UAAU,CAAC,CAAC;IACnE,MAAM,mBAAmB,GAAG,IAAI,CAAC,kBAAkB,EAAE,cAAc,CAAC,CAAC;IAErE,uEAAuE;IACvE,MAAM,oBAAoB,GAA4B;QACpD,KAAK,EAAE,EAAE,CAAC,KAAK,IAAI,QAAQ;QAC3B,IAAI,EAAE,oBAAoB;QAC1B,OAAO,EAAE,KAAK,CAAC,OAAO,CAAC,EAAE,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,WAAW,CAAC;QAC/D,MAAM,EAAE,OAAO,EAAE,CAAC,MAAM,KAAK,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,MAAM,CAAC,CAAC,CAAC,QAAQ;QAC5D,YAAY,EACV,OAAO,EAAE,CAAC,YAAY,KAAK,QAAQ;YACjC,CAAC,CAAC,EAAE,CAAC,YAAY;YACjB,CAAC,CAAC,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,EAAE,CAAC;QAC3C,EAAE,EAAE,UAAU;QACd,IAAI,EAAE,kBAAkB,CAAC,UAAU,CAAC,IAAI,EAAE,CAAC,IAAI,IAAI,UAAU,CAAC,KAAK,CAAC,CAAC,EAAE,EAAE,CAAC;QAC1E,QAAQ,EAAE,OAAO,EAAE,CAAC,QAAQ,KAAK,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,QAAQ,CAAC,CAAC,CAAC,QAAQ;QAClE,iBAAiB,EACf,OAAO,EAAE,CAAC,iBAAiB,KAAK,QAAQ,CAAC,CAAC,CAAC,EAAE,CAAC,iBAAiB,CAAC,CAAC,CAAC,UAAU;QAC9E,UAAU,EAAE,KAAK,CAAC,OAAO,CAAC,EAAE,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;KACvE,CAAC;IACF,IAAI,KAAK,CAAC,OAAO,CAAC,EAAE,CAAC,IAAI,CAAC;QAAE,oBAAoB,CAAC,IAAI,GAAG,EAAE,CAAC,IAAI,CAAC;IAEhE,MAAM,gBAAgB,GAAG,MAAM,CAAC,SAAS,CAAC,MAAM,CAAC,OAAO,EAAE,oBAAoB,CAAC,CAAC;IAEhF,2BAA2B;IAC3B,MAAM,gBAAgB,GAA4B;QAChD,KAAK,EAAE,cAAc,UAAU,EAAE;QACjC,IAAI,EAAE,gBAAgB;QACtB,OAAO,EAAE,CAAC,WAAW,CAAC;QACtB,MAAM,EAAE,QAAQ;QAChB,YAAY,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,EAAE,CAAC;QACnD,WAAW,EAAE,UAAU;QACvB,QAAQ,EAAE,EAAE;KACb,CAAC;IACF,MAAM,YAAY,GAAG,MAAM,CAAC,SAAS,CACnC,kBAAkB,UAAU,wEAAwE,UAAU,8CAA8C,EAC5J,gBAAgB,CACjB,CAAC;IAEF,0EAA0E;IAC1E,mCAAmC;IACnC,IAAI,CAAC,KAAK,EAAE,CAAC;QACX,IAAI,UAAU,CAAC,aAAa,CAAC,EAAE,CAAC;YAC9B,OAAO;gBACL,YAAY;gBACZ,YAAY;gBACZ,MAAM,EAAE,kBAAkB;gBAC1B,gBAAgB,EAAE,KAAK;gBACvB,aAAa;gBACb,SAAS;gBACT,YAAY;gBACZ,gBAAgB;gBAChB,YAAY;aACb,CAAC;QACJ,CAAC;QACD,IAAI,UAAU,CAAC,mBAAmB,CAAC,EAAE,CAAC;YACpC,OAAO;gBACL,YAAY;gBACZ,YAAY;gBACZ,MAAM,EAAE,kBAAkB;gBAC1B,gBAAgB,EAAE,QAAQ;gBAC1B,aAAa,EAAE,mBAAmB;gBAClC,SAAS,EAAE,IAAI,CAAC,kBAAkB,EAAE,UAAU,CAAC;gBAC/C,YAAY,EAAE,IAAI,CAAC,kBAAkB,EAAE,UAAU,CAAC;gBAClD,gBAAgB;gBAChB,YAAY;aACb,CAAC;QACJ,CAAC;IACH,CAAC;IAED,IAAI,MAAM,EAAE,CAAC;QACX,OAAO;YACL,YAAY;YACZ,YAAY;YACZ,MAAM,EAAE,SAAS;YACjB,aAAa;YACb,SAAS;YACT,YAAY;YACZ,gBAAgB;YAChB,YAAY;SACb,CAAC;IACJ,CAAC;IAED,qEAAqE;IACrE,gDAAgD;IAChD,MAAM,KAAK,CAAC,YAAY,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC,4BAA4B;IAC5E,MAAM,SAAS,CAAC,aAAa,EAAE,gBAAgB,EAAE,OAAO,CAAC,CAAC;IAC1D,MAAM,SAAS,CAAC,SAAS,EAAE,YAAY,EAAE,OAAO,CAAC,CAAC;IAClD,2EAA2E;IAC3E,qDAAqD;IACrD,MAAM,MAAM,CAAC,YAAY,EAAE,GAAG,YAAY,WAAW,CAAC,CAAC;IAEvD,OAAO;QACL,YAAY;QACZ,YAAY;QACZ,MAAM,EAAE,UAAU;QAClB,aAAa;QACb,SAAS;QACT,YAAY;QACZ,gBAAgB;QAChB,YAAY;KACb,CAAC;AACJ,CAAC;AAED,SAAS,kBAAkB,CAAC,IAAY;IACtC,MAAM,CAAC,GAAG,IAAI,CAAC,KAAK,CAAC,sBAAsB,CAAC,CAAC;IAC7C,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;AAC9B,CAAC"}

package/dist/core/maintain/orchestrator.d.ts

@@ -1,6 +1,7 @@
 import { type SyncResult } from '../metadata/sync.js';
 import { type LinkCheckResult } from '../links/checker.js';
 import { type AuditResult } from '../audit/auditor.js';
+import { type RegenerateResult } from '../../generators/regenerate.js';
 export interface MaintainOptions {
     docsPath: string;
     quick?: boolean;
@@ -11,6 +12,7 @@ export interface MaintainResult {
     success: boolean;
     domainHealth: DomainHealthResult;
     metadataSync?: SyncResult;
+    indexRegeneration?: RegenerateResult;
     linkCheck?: LinkCheckResult;
     audit?: AuditResult;
     healthScore: number;

package/dist/core/maintain/orchestrator.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"orchestrator.d.ts","sourceRoot":"","sources":["../../../src/core/maintain/orchestrator.ts"],"names":[],"mappings":"AAIA,OAAO,EAAgB,KAAK,UAAU,EAAE,MAAM,qBAAqB,CAAC;AACpE,OAAO,EAAc,KAAK,eAAe,EAAE,MAAM,qBAAqB,CAAC;AACvE,OAAO,EAAsB,KAAK,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAa3E,MAAM,WAAW,eAAe;IAC9B,QAAQ,EAAE,MAAM,CAAC;IACjB,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AAED,MAAM,WAAW,cAAc;IAC7B,OAAO,EAAE,OAAO,CAAC;IACjB,YAAY,EAAE,kBAAkB,CAAC;IACjC,YAAY,CAAC,EAAE,UAAU,CAAC;IAC1B,SAAS,CAAC,EAAE,eAAe,CAAC;IAC5B,KAAK,CAAC,EAAE,WAAW,CAAC;IACpB,WAAW,EAAE,MAAM,CAAC;IACpB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,MAAM,EAAE,MAAM,EAAE,CAAC;CAClB;AAED,MAAM,WAAW,kBAAkB;IACjC,OAAO,EAAE,OAAO,CAAC;IACjB,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,iBAAiB,EAAE,MAAM,EAAE,CAAC;CAC7B;AAED;;GAEG;AACH,wBAAsB,cAAc,CAAC,OAAO,EAAE,eAAe,GAAG,OAAO,CAAC,cAAc,CAAC,CAoKtF;AAwRD;;GAEG;AACH,wBAAsB,gBAAgB,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC;IAChE,OAAO,EAAE,OAAO,CAAC;IACjB,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,EAAE,CAAC;CAClB,CAAC,CAoBD"}
+{"version":3,"file":"orchestrator.d.ts","sourceRoot":"","sources":["../../../src/core/maintain/orchestrator.ts"],"names":[],"mappings":"AAIA,OAAO,EAAgB,KAAK,UAAU,EAAE,MAAM,qBAAqB,CAAC;AACpE,OAAO,EAAc,KAAK,eAAe,EAAE,MAAM,qBAAqB,CAAC;AACvE,OAAO,EAAsB,KAAK,WAAW,EAAE,MAAM,qBAAqB,CAAC;AAY3E,OAAO,EAEL,KAAK,gBAAgB,EACtB,MAAM,gCAAgC,CAAC;AAExC,MAAM,WAAW,eAAe;IAC9B,QAAQ,EAAE,MAAM,CAAC;IACjB,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AAED,MAAM,WAAW,cAAc;IAC7B,OAAO,EAAE,OAAO,CAAC;IACjB,YAAY,EAAE,kBAAkB,CAAC;IACjC,YAAY,CAAC,EAAE,UAAU,CAAC;IAC1B,iBAAiB,CAAC,EAAE,gBAAgB,CAAC;IACrC,SAAS,CAAC,EAAE,eAAe,CAAC;IAC5B,KAAK,CAAC,EAAE,WAAW,CAAC;IACpB,WAAW,EAAE,MAAM,CAAC;IACpB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,MAAM,EAAE,MAAM,EAAE,CAAC;CAClB;AAED,MAAM,WAAW,kBAAkB;IACjC,OAAO,EAAE,OAAO,CAAC;IACjB,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,cAAc,EAAE,MAAM,EAAE,CAAC;IACzB,iBAAiB,EAAE,MAAM,EAAE,CAAC;CAC7B;AAED;;GAEG;AACH,wBAAsB,cAAc,CAAC,OAAO,EAAE,eAAe,GAAG,OAAO,CAAC,cAAc,CAAC,CAsLtF;AAyRD;;GAEG;AACH,wBAAsB,gBAAgB,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC;IAChE,OAAO,EAAE,OAAO,CAAC;IACjB,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,EAAE,CAAC;CAClB,CAAC,CAoBD"}

package/dist/core/maintain/orchestrator.js

@@ -12,6 +12,7 @@ import { buildCiterIndex } from '../knowledge-base/citers.js';
 import { generateFactsIndex } from '../../generators/facts-index.js';
 import { generateIncidentsIndex } from '../../generators/incidents-index.js';
 import { generateSymptomsIndex } from '../../generators/symptoms-index.js';
+import { regenerateIndexes, } from '../../generators/regenerate.js';
 /**
  * Run full maintenance on documentation
  */
@@ -74,6 +75,23 @@ export async function runMaintenance(options) {
         result.errors.push(`Metadata sync failed: ${message}`);
         result.success = false;
     }
+    // Step 1.5: Index Regeneration
+    //
+    // Domain and root INDEX.md/REGISTRY.md are derived artifacts — they are
+    // rebuilt from the documents on disk on every maintain run so they never
+    // drift from reality. This also self-heals any INDEX.md/REGISTRY.md that
+    // checkDomainHealth reported as missing. Runs in quick mode too: it is
+    // cheap and is the core "self-managing" guarantee.
+    if (!silent) {
+        logger.subheader('Step 1.5: Index Regeneration');
+    }
+    try {
+        result.indexRegeneration = await regenerateIndexes({ docsPath, silent });
+    }
+    catch (error) {
+        const message = error instanceof Error ? error.message : String(error);
+        result.errors.push(`Index regeneration failed: ${message}`);
+    }
     // Step 2: Link Check (skip in quick mode)
     if (!quick) {
         if (!silent) {
@@ -252,6 +270,7 @@ version: '1.0.0'
 |--------|-------|
 | Overall Health | ${result.healthScore.toFixed(1)}% |
 | Domain Health | ${result.domainHealth.healthy ? 'Healthy' : 'Issues Found'} |
+| Indexes Regenerated | ${result.indexRegeneration?.filesWritten.length ?? 0} files |
 | Files Scanned | ${result.metadataSync?.totalFiles ?? 0} |
 | Valid Files | ${result.metadataSync?.validFiles ?? 0} |
 | Broken Links | ${result.linkCheck?.brokenLinks.length ?? 'Not checked'} |

package/dist/core/maintain/orchestrator.js.map

@@ -1 +1 @@
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package/dist/generators/regenerate.d.ts

@@ -0,0 +1,38 @@
+import { type Domain } from '../core/domains/constants.js';
+export interface RegenerateOptions {
+    /** Path to the documentation root (e.g. `.documentation`). */
+    docsPath: string;
+    /**
+     * Restrict domain INDEX.md/REGISTRY.md writes to these domains. The root
+     * INDEX.md/REGISTRY.md are always refreshed regardless. Defaults to all
+     * domains.
+     */
+    domains?: Domain[];
+    silent?: boolean;
+}
+export interface RegenerateResult {
+    /** Per-domain document counts — all domains, regardless of the filter. */
+    documentCounts: Record<string, number>;
+    /** Absolute paths of every INDEX.md / REGISTRY.md written. */
+    filesWritten: string[];
+    /** Total documents across all domains. */
+    totalDocuments: number;
+}
+/**
+ * List the document files in a domain directory, excluding the generated
+ * INDEX.md / REGISTRY.md. Returns sorted file names (not paths). Empty when
+ * the domain directory does not exist.
+ */
+export declare function listDomainDocFiles(docsPath: string, domain: string): Promise<string[]>;
+/**
+ * Regenerate domain + root INDEX.md / REGISTRY.md from the documents on disk.
+ *
+ * This is the single source of truth for index generation, shared by
+ * `integrate`, `maintain`, and the `index` CLI command. It replaces the
+ * fragile regex-append path in `integrate` that could only update an
+ * already-populated table — and silently no-op'd on a freshly scaffolded
+ * INDEX.md, so the first document into any domain was never registered
+ * (see https://github.com/TheGlitchKing/hit-em-with-the-docs/issues/7).
+ */
+export declare function regenerateIndexes(options: RegenerateOptions): Promise<RegenerateResult>;
+//# sourceMappingURL=regenerate.d.ts.map

package/dist/generators/regenerate.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"regenerate.d.ts","sourceRoot":"","sources":["../../src/generators/regenerate.ts"],"names":[],"mappings":"AAEA,OAAO,EAAW,KAAK,MAAM,EAAE,MAAM,8BAA8B,CAAC;AAkBpE,MAAM,WAAW,iBAAiB;IAChC,8DAA8D;IAC9D,QAAQ,EAAE,MAAM,CAAC;IACjB;;;;OAIG;IACH,OAAO,CAAC,EAAE,MAAM,EAAE,CAAC;IACnB,MAAM,CAAC,EAAE,OAAO,CAAC;CAClB;AAED,MAAM,WAAW,gBAAgB;IAC/B,0EAA0E;IAC1E,cAAc,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;IACvC,8DAA8D;IAC9D,YAAY,EAAE,MAAM,EAAE,CAAC;IACvB,0CAA0C;IAC1C,cAAc,EAAE,MAAM,CAAC;CACxB;AAED;;;;GAIG;AACH,wBAAsB,kBAAkB,CACtC,QAAQ,EAAE,MAAM,EAChB,MAAM,EAAE,MAAM,GACb,OAAO,CAAC,MAAM,EAAE,CAAC,CASnB;AAkED;;;;;;;;;GASG;AACH,wBAAsB,iBAAiB,CACrC,OAAO,EAAE,iBAAiB,GACzB,OAAO,CAAC,gBAAgB,CAAC,CAiE3B"}