@teselagen/ove 0.8.39 → 0.8.41
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/AlignmentView/AlignmentSearchBar.d.ts +2 -0
- package/AlignmentView/Mismatches.d.ts +2 -20
- package/AlignmentView/findAlignmentDifferences.d.ts +53 -0
- package/AlignmentView/utils.d.ts +31 -0
- package/index.cjs.js +1063 -164
- package/index.es.js +1063 -164
- package/index.umd.js +1063 -164
- package/ove.css +138 -54
- package/package.json +1 -1
- package/src/AlignmentView/AlignmentSearchBar.js +810 -0
- package/src/AlignmentView/AlignmentVisibilityTool.js +9 -11
- package/src/AlignmentView/Minimap.js +21 -3
- package/src/AlignmentView/Mismatches.js +201 -123
- package/src/AlignmentView/findAlignmentDifferences.js +116 -0
- package/src/AlignmentView/findAlignmentDifferences.test.js +208 -0
- package/src/AlignmentView/index.js +30 -2
- package/src/AlignmentView/style.css +84 -0
- package/src/AlignmentView/utils.js +30 -0
- package/src/PropertySidePanel/index.js +89 -28
- package/src/redux/alignments.js +58 -20
package/ove.css
CHANGED
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@@ -11231,6 +11231,10 @@ path.partWithSelectedTag {
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11231
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height: 12px;
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11232
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top: 2px;
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11233
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}
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11234
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+
.alignment-search-bar .bp3-input {
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11235
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border-radius: 5px !important;
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11236
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}
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11237
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+
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.tg-pinch-helper {
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width: 100%;
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}
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@@ -11293,6 +11297,10 @@ path.partWithSelectedTag {
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/* .alignmentViewTrackContainer:hover .alignmentTrackNameDiv {
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opacity: 1 !important;
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} */
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11300
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+
.ve-alignment-top-bar {
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11301
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align-items: center;
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11302
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}
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11303
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+
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.ve-alignment-top-bar > * {
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overflow-wrap: normal;
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flex: 0 0 auto;
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@@ -11309,6 +11317,82 @@ path.partWithSelectedTag {
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11309
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.veAlignmentMismatch {
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opacity: 0.9;
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11311
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}
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11320
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+
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11321
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+
.veDiffNavigator {
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11322
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display: flex;
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11323
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align-items: center;
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11324
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gap: 4px;
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11325
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}
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11326
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+
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11327
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+
/* Menu item content layout */
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11328
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+
.veDiffMenuItem-inner {
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11329
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display: flex;
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11330
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align-items: center;
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11331
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gap: 6px;
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}
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11333
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+
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11334
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+
/* Navigation pill — groups prev/counter/next into one unit */
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11335
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.veDiffNav {
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11336
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display: flex;
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11337
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align-items: center;
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11338
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border-radius: 3px;
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11339
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background: rgba(92, 112, 128, 0.06);
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border: 1px solid rgba(92, 112, 128, 0.18);
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}
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11342
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+
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11343
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+
.veDiffNav-center {
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display: flex;
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align-items: baseline;
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gap: 3px;
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padding: 0 6px;
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min-width: 64px;
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justify-content: center;
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}
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11351
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.veDiffNav-fraction {
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font-size: 11px;
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font-variant-numeric: tabular-nums;
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color: #5c7080;
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line-height: 1;
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}
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11358
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+
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.veDiffNav-sep {
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margin: 0 1px;
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11361
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opacity: 0.45;
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11362
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}
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11363
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+
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/* Position number — monospace fits sequence coordinates */
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11365
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.veDiffNav-pos {
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11366
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font-size: 10px;
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font-family: monospace;
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font-variant-numeric: tabular-nums;
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color: #a7b6c2;
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line-height: 1;
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}
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.veDiffNav-empty {
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font-size: 11px;
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font-style: italic;
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color: #a7b6c2;
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padding: 0 4px;
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}
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.bp3-dark .veDiffNav {
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background: rgba(167, 182, 194, 0.05);
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border-color: rgba(167, 182, 194, 0.14);
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}
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.bp3-dark .veDiffNav-fraction {
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color: #5c7080;
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}
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11388
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.bp3-dark .veDiffNav-pos {
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color: #4f6272;
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}
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11392
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11393
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+
.bp3-dark .veDiffNav-empty {
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color: #5c7080;
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11395
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}
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.veRowItem:has(.rowViewTextContainer) .veAlignmentMismatch {
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opacity: 0.5;
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}
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@@ -11377,6 +11461,60 @@ path.partWithSelectedTag {
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opacity: 0.5;
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top: 0;
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}
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11464
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+
.veFindBar {
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background: #ffffff;
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border-bottom: 1px solid lightgrey;
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border-left: 1px solid lightgrey;
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11468
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border-right: 1px solid lightgrey;
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border-bottom-left-radius: 5px;
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border-bottom-right-radius: 5px;
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11471
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}
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11472
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+
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11473
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.veFindBar > .bp3-control {
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margin-bottom: 0px;
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}
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11476
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.veFindBar > * {
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width: fit-content;
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}
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.bp3-dark .veFindBar {
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border-radius: 5px;
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background: #30404d !important;
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11483
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border-bottom: 1px solid #202b33 !important;
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border-left: 1px solid #202b33 !important;
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border-right: 1px solid #202b33 !important;
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}
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.ve-find-options-popover > * {
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margin: 10px 5px;
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}
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.veAnnotationFindMatches {
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width: 250px;
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padding: 10px;
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max-height: 180px;
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overflow-y: scroll;
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min-width: 313px;
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}
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.veAnnotationFoundType {
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font-weight: bold;
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}
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.veAnnotationFoundResult {
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display: flex;
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justify-content: space-between;
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padding-left: 5px;
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padding-right: 5px;
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padding-top: 3px;
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padding-bottom: 5px;
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cursor: pointer;
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}
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.veAnnotationFoundResult:hover {
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background: lightblue;
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}
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.veAnnotationFoundResultRange {
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font-size: 10;
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color: gray;
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}
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.simple-dialog .dialog-buttons {
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display: flex;
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flex-direction: row;
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@@ -11688,60 +11826,6 @@ path.partWithSelectedTag {
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overflow: auto;
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max-height: 50vh;
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}
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11691
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-
.veFindBar {
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background: #ffffff;
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11693
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-
border-bottom: 1px solid lightgrey;
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11694
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border-left: 1px solid lightgrey;
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border-right: 1px solid lightgrey;
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border-bottom-left-radius: 5px;
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border-bottom-right-radius: 5px;
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}
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-
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.veFindBar > .bp3-control {
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margin-bottom: 0px;
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}
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11703
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.veFindBar > * {
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width: fit-content;
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}
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11706
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-
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.bp3-dark .veFindBar {
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border-radius: 5px;
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background: #30404d !important;
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11710
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border-bottom: 1px solid #202b33 !important;
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border-left: 1px solid #202b33 !important;
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border-right: 1px solid #202b33 !important;
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11713
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}
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-
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.ve-find-options-popover > * {
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margin: 10px 5px;
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}
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.veAnnotationFindMatches {
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width: 250px;
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padding: 10px;
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max-height: 180px;
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overflow-y: scroll;
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11723
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min-width: 313px;
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11724
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}
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-
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.veAnnotationFoundType {
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font-weight: bold;
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}
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11729
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.veAnnotationFoundResult {
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display: flex;
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11731
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justify-content: space-between;
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11732
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padding-left: 5px;
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11733
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padding-right: 5px;
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11734
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padding-top: 3px;
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11735
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padding-bottom: 5px;
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11736
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cursor: pointer;
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11737
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}
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11738
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.veAnnotationFoundResult:hover {
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background: lightblue;
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11740
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}
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11741
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.veAnnotationFoundResultRange {
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11742
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font-size: 10;
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11743
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color: gray;
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11744
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}
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11745
11829
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.veStatusBar {
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display: flex;
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align-items: center;
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