@teselagen/ove 0.7.32 → 0.7.34

package/index.cjs.js

@@ -83324,6 +83324,9 @@ function positionInCdsToPositionInMainSequence(index2, forward, translationRange
 }
 __name(positionInCdsToPositionInMainSequence, "positionInCdsToPositionInMainSequence");
 function getAminoAcidDataForEachBaseOfDna(originalSequenceString, forward, optionalSubrangeRange, isProteinSequence) {
+  if (!originalSequenceString) {
+    return [];
+  }
   const {
     sequenceString,
     translationRange,
@@ -124877,7 +124880,7 @@ function showFileDialog({ multiple = false, onSelect }) {
   input.click();
 }
 __name(showFileDialog, "showFileDialog");
-const version = "0.7.31";
+const version = "0.7.33";
 const packageJson = {
   version
 };
@@ -145963,7 +145966,6 @@ const AlignmentView = /* @__PURE__ */ __name((props) => {
     scrollPercentageToJumpTo,
     selectionLayer: selectionLayer2,
     sequenceData: sequenceData2,
-    sequenceLength,
     shouldAutosave,
     store: store2,
     height: _height,
@@ -146177,11 +146179,11 @@ ${seqDataToCopy}\r
       const forceReduxSelectionLayerUpdate = /* @__PURE__ */ __name((newSelection) => {
         selectionLayerUpdate2(newSelection, { forceReduxUpdate: true });
       }, "forceReduxSelectionLayerUpdate");
-      const sequenceLength2 = getSequenceLength();
+      const sequenceLength = getSequenceLength();
       updateSelectionOrCaret({
         doNotWrapOrigin: true,
         shiftHeld,
-        sequenceLength: sequenceLength2,
+        sequenceLength,
         newRangeOrCaret,
         caretPosition: easyStore2.current.caretPosition,
         selectionLayer: easyStore2.current.selectionLayer,
@@ -146211,11 +146213,12 @@ ${seqDataToCopy}\r
       if (sequenceData2 == null ? void 0 : sequenceData2.isProtein) {
         nearestCaretPos = Math.round(nearestCaretPos / 3) * 3;
       }
+      const sequenceLength = getSequenceLength();
       if (sequenceLength === 0) nearestCaretPos = 0;
       const callbackVals = {
         updateSelectionOrCaret: updateSelectionOrCaret$1,
         nearestCaretPos,
-        sequenceLength: getSequenceLength(),
+        sequenceLength,
         caretPosition: easyStore2.current.caretPosition,
         selectionLayer: easyStore2.current.selectionLayer,
         easyStore: easyStore2.current,
@@ -146242,7 +146245,6 @@ ${seqDataToCopy}\r
       nameDivWidth,
       selectionLayerUpdate2,
       sequenceData2 == null ? void 0 : sequenceData2.isProtein,
-      sequenceLength,
       updateSelectionOrCaret$1
     ]
   );
@@ -150298,11 +150300,23 @@ const inlineFindTool = connectToEditor(({ findTool: findTool2 = {} }) => {
   return {
     isOpen: findTool2.isOpen
   };
-})(({ toolbarItemProps, editorName, toggleFindTool: toggleFindTool2, isOpen }) => {
+})(({
+  toolbarItemProps,
+  editorName,
+  toggleFindTool: toggleFindTool2,
+  isOpen,
+  additionalEnzymes
+}) => {
   return /* @__PURE__ */ React.createElement(
     ToolbarItem$1,
     __spreadValues({}, __spreadValues({
-      Icon: !isOpen ? /* @__PURE__ */ React.createElement("div", null, /* @__PURE__ */ React.createElement(core.Icon, { "data-test": "ve-find-tool-toggle", icon: "search" }), /* @__PURE__ */ React.createElement(core.Icon, { icon: "caret-right" })) : /* @__PURE__ */ React.createElement(FindBar$1, { editorName }),
+      Icon: !isOpen ? /* @__PURE__ */ React.createElement("div", null, /* @__PURE__ */ React.createElement(core.Icon, { "data-test": "ve-find-tool-toggle", icon: "search" }), /* @__PURE__ */ React.createElement(core.Icon, { icon: "caret-right" })) : /* @__PURE__ */ React.createElement(
+        FindBar$1,
+        {
+          editorName,
+          additionalEnzymes
+        }
+      ),
       renderIconAbove: isOpen,
       onIconClick: toggleFindTool2,
       tooltip: isOpen ? /* @__PURE__ */ React.createElement("span", null, "Hide Find Tool ", /* @__PURE__ */ React.createElement("span", { style: { fontSize: 10 } }, "(Cmd/Ctrl+F)")) : /* @__PURE__ */ React.createElement("span", null, "Show Find Tool ", /* @__PURE__ */ React.createElement("span", { style: { fontSize: 10 } }, "(Cmd/Ctrl+F)"))

package/index.es.js

@@ -83306,6 +83306,9 @@ function positionInCdsToPositionInMainSequence(index2, forward, translationRange
 }
 __name(positionInCdsToPositionInMainSequence, "positionInCdsToPositionInMainSequence");
 function getAminoAcidDataForEachBaseOfDna(originalSequenceString, forward, optionalSubrangeRange, isProteinSequence) {
+  if (!originalSequenceString) {
+    return [];
+  }
   const {
     sequenceString,
     translationRange,
@@ -124859,7 +124862,7 @@ function showFileDialog({ multiple = false, onSelect }) {
   input.click();
 }
 __name(showFileDialog, "showFileDialog");
-const version = "0.7.31";
+const version = "0.7.33";
 const packageJson = {
   version
 };
@@ -145945,7 +145948,6 @@ const AlignmentView = /* @__PURE__ */ __name((props) => {
     scrollPercentageToJumpTo,
     selectionLayer: selectionLayer2,
     sequenceData: sequenceData2,
-    sequenceLength,
     shouldAutosave,
     store: store2,
     height: _height,
@@ -146159,11 +146161,11 @@ ${seqDataToCopy}\r
       const forceReduxSelectionLayerUpdate = /* @__PURE__ */ __name((newSelection) => {
         selectionLayerUpdate2(newSelection, { forceReduxUpdate: true });
       }, "forceReduxSelectionLayerUpdate");
-      const sequenceLength2 = getSequenceLength();
+      const sequenceLength = getSequenceLength();
       updateSelectionOrCaret({
         doNotWrapOrigin: true,
         shiftHeld,
-        sequenceLength: sequenceLength2,
+        sequenceLength,
         newRangeOrCaret,
         caretPosition: easyStore2.current.caretPosition,
         selectionLayer: easyStore2.current.selectionLayer,
@@ -146193,11 +146195,12 @@ ${seqDataToCopy}\r
       if (sequenceData2 == null ? void 0 : sequenceData2.isProtein) {
         nearestCaretPos = Math.round(nearestCaretPos / 3) * 3;
       }
+      const sequenceLength = getSequenceLength();
       if (sequenceLength === 0) nearestCaretPos = 0;
       const callbackVals = {
         updateSelectionOrCaret: updateSelectionOrCaret$1,
         nearestCaretPos,
-        sequenceLength: getSequenceLength(),
+        sequenceLength,
         caretPosition: easyStore2.current.caretPosition,
         selectionLayer: easyStore2.current.selectionLayer,
         easyStore: easyStore2.current,
@@ -146224,7 +146227,6 @@ ${seqDataToCopy}\r
       nameDivWidth,
       selectionLayerUpdate2,
       sequenceData2 == null ? void 0 : sequenceData2.isProtein,
-      sequenceLength,
       updateSelectionOrCaret$1
     ]
   );
@@ -150280,11 +150282,23 @@ const inlineFindTool = connectToEditor(({ findTool: findTool2 = {} }) => {
   return {
     isOpen: findTool2.isOpen
   };
-})(({ toolbarItemProps, editorName, toggleFindTool: toggleFindTool2, isOpen }) => {
+})(({
+  toolbarItemProps,
+  editorName,
+  toggleFindTool: toggleFindTool2,
+  isOpen,
+  additionalEnzymes
+}) => {
   return /* @__PURE__ */ React__default.createElement(
     ToolbarItem$1,
     __spreadValues({}, __spreadValues({
-      Icon: !isOpen ? /* @__PURE__ */ React__default.createElement("div", null, /* @__PURE__ */ React__default.createElement(Icon, { "data-test": "ve-find-tool-toggle", icon: "search" }), /* @__PURE__ */ React__default.createElement(Icon, { icon: "caret-right" })) : /* @__PURE__ */ React__default.createElement(FindBar$1, { editorName }),
+      Icon: !isOpen ? /* @__PURE__ */ React__default.createElement("div", null, /* @__PURE__ */ React__default.createElement(Icon, { "data-test": "ve-find-tool-toggle", icon: "search" }), /* @__PURE__ */ React__default.createElement(Icon, { icon: "caret-right" })) : /* @__PURE__ */ React__default.createElement(
+        FindBar$1,
+        {
+          editorName,
+          additionalEnzymes
+        }
+      ),
       renderIconAbove: isOpen,
       onIconClick: toggleFindTool2,
       tooltip: isOpen ? /* @__PURE__ */ React__default.createElement("span", null, "Hide Find Tool ", /* @__PURE__ */ React__default.createElement("span", { style: { fontSize: 10 } }, "(Cmd/Ctrl+F)")) : /* @__PURE__ */ React__default.createElement("span", null, "Show Find Tool ", /* @__PURE__ */ React__default.createElement("span", { style: { fontSize: 10 } }, "(Cmd/Ctrl+F)"))

package/index.umd.js

@@ -112227,6 +112227,9 @@ ${latestSubscriptionCallbackError.current.stack}
   }
   __name(positionInCdsToPositionInMainSequence, "positionInCdsToPositionInMainSequence");
   function getAminoAcidDataForEachBaseOfDna(originalSequenceString, forward, optionalSubrangeRange, isProteinSequence) {
+    if (!originalSequenceString) {
+      return [];
+    }
     const {
       sequenceString,
       translationRange,
@@ -152975,7 +152978,7 @@ Part of ${annotation.translationType} Translation from BPs ${annotation.start +
     input.click();
   }
   __name(showFileDialog, "showFileDialog");
-  const version = "0.7.31";
+  const version = "0.7.33";
   const packageJson = {
     version
   };
@@ -172459,7 +172462,6 @@ Part of ${annotation.translationType} Translation from BPs ${annotation.start +
       scrollPercentageToJumpTo,
       selectionLayer: selectionLayer2,
       sequenceData: sequenceData2,
-      sequenceLength,
       shouldAutosave,
       store: store2,
       height: _height,
@@ -172673,11 +172675,11 @@ ${seqDataToCopy}\r
         const forceReduxSelectionLayerUpdate = /* @__PURE__ */ __name((newSelection) => {
           selectionLayerUpdate2(newSelection, { forceReduxUpdate: true });
         }, "forceReduxSelectionLayerUpdate");
-        const sequenceLength2 = getSequenceLength();
+        const sequenceLength = getSequenceLength();
         updateSelectionOrCaret({
           doNotWrapOrigin: true,
           shiftHeld,
-          sequenceLength: sequenceLength2,
+          sequenceLength,
           newRangeOrCaret,
           caretPosition: easyStore2.current.caretPosition,
           selectionLayer: easyStore2.current.selectionLayer,
@@ -172707,11 +172709,12 @@ ${seqDataToCopy}\r
         if (sequenceData2 == null ? void 0 : sequenceData2.isProtein) {
           nearestCaretPos = Math.round(nearestCaretPos / 3) * 3;
         }
+        const sequenceLength = getSequenceLength();
         if (sequenceLength === 0) nearestCaretPos = 0;
         const callbackVals = {
           updateSelectionOrCaret: updateSelectionOrCaret$1,
           nearestCaretPos,
-          sequenceLength: getSequenceLength(),
+          sequenceLength,
           caretPosition: easyStore2.current.caretPosition,
           selectionLayer: easyStore2.current.selectionLayer,
           easyStore: easyStore2.current,
@@ -172738,7 +172741,6 @@ ${seqDataToCopy}\r
         nameDivWidth,
         selectionLayerUpdate2,
         sequenceData2 == null ? void 0 : sequenceData2.isProtein,
-        sequenceLength,
         updateSelectionOrCaret$1
       ]
     );
@@ -176794,11 +176796,23 @@ ${seqDataToCopy}\r
     return {
       isOpen: findTool2.isOpen
     };
-  })(({ toolbarItemProps, editorName, toggleFindTool: toggleFindTool2, isOpen: isOpen2 }) => {
+  })(({
+    toolbarItemProps,
+    editorName,
+    toggleFindTool: toggleFindTool2,
+    isOpen: isOpen2,
+    additionalEnzymes
+  }) => {
     return /* @__PURE__ */ React.createElement(
       ToolbarItem$1,
       __spreadValues({}, __spreadValues({
-        Icon: !isOpen2 ? /* @__PURE__ */ React.createElement("div", null, /* @__PURE__ */ React.createElement(Icon, { "data-test": "ve-find-tool-toggle", icon: "search" }), /* @__PURE__ */ React.createElement(Icon, { icon: "caret-right" })) : /* @__PURE__ */ React.createElement(FindBar$1, { editorName }),
+        Icon: !isOpen2 ? /* @__PURE__ */ React.createElement("div", null, /* @__PURE__ */ React.createElement(Icon, { "data-test": "ve-find-tool-toggle", icon: "search" }), /* @__PURE__ */ React.createElement(Icon, { icon: "caret-right" })) : /* @__PURE__ */ React.createElement(
+          FindBar$1,
+          {
+            editorName,
+            additionalEnzymes
+          }
+        ),
         renderIconAbove: isOpen2,
         onIconClick: toggleFindTool2,
         tooltip: isOpen2 ? /* @__PURE__ */ React.createElement("span", null, "Hide Find Tool ", /* @__PURE__ */ React.createElement("span", { style: { fontSize: 10 } }, "(Cmd/Ctrl+F)")) : /* @__PURE__ */ React.createElement("span", null, "Show Find Tool ", /* @__PURE__ */ React.createElement("span", { style: { fontSize: 10 } }, "(Cmd/Ctrl+F)"))

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@teselagen/ove",
-  "version": "0.7.32",
+  "version": "0.7.34",
   "main": "./src/index.js",
   "type": "module",
   "exports": {

package/src/AlignmentView/index.js

@@ -99,7 +99,6 @@ export const AlignmentView = props => {
     scrollPercentageToJumpTo,
     selectionLayer,
     sequenceData,
-    sequenceLength,
     shouldAutosave,
     store,
     height: _height,
@@ -371,11 +370,12 @@ export const AlignmentView = props => {
       if (sequenceData?.isProtein) {
         nearestCaretPos = Math.round(nearestCaretPos / 3) * 3;
       }
+      const sequenceLength = getSequenceLength();
       if (sequenceLength === 0) nearestCaretPos = 0;
       const callbackVals = {
         updateSelectionOrCaret,
         nearestCaretPos,
-        sequenceLength: getSequenceLength(),
+        sequenceLength,
         caretPosition: easyStore.current.caretPosition,
         selectionLayer: easyStore.current.selectionLayer,
         easyStore: easyStore.current,
@@ -402,7 +402,6 @@ export const AlignmentView = props => {
       nameDivWidth,
       selectionLayerUpdate,
       sequenceData?.isProtein,
-      sequenceLength,
       updateSelectionOrCaret
     ]
   );

package/src/ToolBar/inlineFindTool.js

@@ -8,7 +8,13 @@ export default connectToEditor(({ findTool = {} }) => {
   return {
     isOpen: findTool.isOpen
   };
-})(({ toolbarItemProps, editorName, toggleFindTool, isOpen }) => {
+})(({
+  toolbarItemProps,
+  editorName,
+  toggleFindTool,
+  isOpen,
+  additionalEnzymes
+}) => {
   return (
     <ToolbarItem
       {...{
@@ -18,7 +24,10 @@ export default connectToEditor(({ findTool = {} }) => {
             <Icon icon="caret-right" />
           </div>
         ) : (
-          <FindBar editorName={editorName} />
+          <FindBar
+            editorName={editorName}
+            additionalEnzymes={additionalEnzymes}
+          />
         ),
         renderIconAbove: isOpen,
         onIconClick: toggleFindTool,