@teselagen/ove 0.7.27 → 0.7.28

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (304) hide show
  1. package/AASliver.js +187 -0
  2. package/AddLaddersDialog.js +82 -0
  3. package/AdditionalCutsiteInfoDialog.js +599 -0
  4. package/AlignmentView/Mismatches.d.ts +3 -3
  5. package/AlignmentVisibilityTool.js +105 -0
  6. package/AnnotationContainerHolder.js +20 -0
  7. package/AnnotationPositioner.js +27 -0
  8. package/AutoAnnotate.js +501 -0
  9. package/AutoAnnotateBpMatchingDialog.js +208 -0
  10. package/Axis.js +151 -0
  11. package/AxisNumbers.js +35 -0
  12. package/Browser.js +106 -0
  13. package/Caret.js +63 -0
  14. package/Chromatogram.js +293 -0
  15. package/CircularDnaSequence.js +73 -0
  16. package/CircularView/Labels/index.d.ts +1 -1
  17. package/CircularView/index.d.ts +0 -1
  18. package/CircularZoomMinimap.js +16 -0
  19. package/ColorPicker.js +30 -0
  20. package/CommandHotkeyHandler.js +44 -0
  21. package/CreateAnnotationsPage.d.ts +4 -4
  22. package/CreateAnnotationsPage.js +98 -0
  23. package/Cutsite.js +18 -0
  24. package/CutsiteProperties.js +176 -0
  25. package/CutsiteSelectionLayers.js +47 -0
  26. package/Cutsites.js +271 -0
  27. package/DeletionLayer.js +28 -0
  28. package/DigestTool/Ladder.d.ts +1 -1
  29. package/DropHandler.css +21 -0
  30. package/DropHandler.js +64 -0
  31. package/EditCaretPosition.js +234 -0
  32. package/EditTrackNameDialog.js +30 -0
  33. package/Feature.js +83 -0
  34. package/FeatureProperties.js +6 -0
  35. package/FillWindow.js +47 -0
  36. package/GenbankView.js +74 -0
  37. package/GeneralProperties.js +117 -0
  38. package/GenericAnnotationProperties.js +406 -0
  39. package/GlobalDialog.js +73 -0
  40. package/GlobalDialogUtils.js +110 -0
  41. package/GoToDialog.js +25 -0
  42. package/HorizontalPanelDragHandle.js +35 -0
  43. package/Keyboard.js +85 -0
  44. package/Labels.js +327 -0
  45. package/Ladder.css +20 -0
  46. package/Ladder.js +303 -0
  47. package/MeltingTemp.js +85 -0
  48. package/Menlo.ttf +0 -0
  49. package/Minimap.js +515 -0
  50. package/Mismatches.js +134 -0
  51. package/Monaco.ttf +0 -0
  52. package/MultipleSeqsDetectedOnImportDialog.js +74 -0
  53. package/Orf.js +109 -0
  54. package/OrfProperties.js +117 -0
  55. package/Orfs.js +35 -0
  56. package/PCRTool.js +179 -0
  57. package/PairwiseAlignmentView.js +68 -0
  58. package/Part.js +34 -0
  59. package/PartProperties.js +9 -0
  60. package/PassThrough.js +3 -0
  61. package/PerformantSelectionLayer.js +32 -0
  62. package/PinchHelper.js +24 -0
  63. package/PointedAnnotation.js +347 -0
  64. package/PositionAnnotationOnCircle.js +26 -0
  65. package/Primer.js +41 -0
  66. package/PrimerProperties.js +19 -0
  67. package/Reflex/index.d.ts +0 -1
  68. package/ReflexContainer.js +802 -0
  69. package/ReflexElement.js +160 -0
  70. package/ReflexEvents.js +77 -0
  71. package/ReflexSplitter.js +205 -0
  72. package/RenameSequenceDialog.js +7 -0
  73. package/RotateCircularViewSlider.js +93 -0
  74. package/RowView/index.d.ts +0 -1
  75. package/SelectDialog.js +150 -0
  76. package/SequenceName.js +15 -0
  77. package/SimpleCircularOrLinearView.js +381 -0
  78. package/SimpleOligoPreview.js +39 -0
  79. package/SingleEnzymeCutsiteInfo.js +139 -0
  80. package/ToolBar/ToolbarItem.d.ts +1 -3
  81. package/ToolbarItem.js +192 -0
  82. package/Translation.js +198 -0
  83. package/TranslationProperties.js +149 -0
  84. package/UncontrolledSliderWithPlusMinusBtns.css +5 -0
  85. package/UncontrolledSliderWithPlusMinusBtns.js +134 -0
  86. package/VeTopRightContainer.js +12 -0
  87. package/ZoomCircularViewSlider.js +62 -0
  88. package/ZoomLinearView.js +47 -0
  89. package/addAlignment.js +6 -0
  90. package/addMetaToActionCreators.js +12 -0
  91. package/addWrappedAddons.js +20 -0
  92. package/alignmentTool.js +503 -0
  93. package/alignments.js +379 -0
  94. package/annotationLabelVisibility.js +2 -0
  95. package/annotationSearchSelector.js +24 -0
  96. package/annotationTypes.js +35 -0
  97. package/annotationVisibility.js +196 -0
  98. package/annotationsToSupport.js +104 -0
  99. package/arrayToObjWithIds.js +17 -0
  100. package/arrayUtils.js +19 -0
  101. package/array_move.js +10 -0
  102. package/calculateTickMarkPositionsForGivenRange.js +47 -0
  103. package/caretPosition.js +27 -0
  104. package/cdsFeaturesSelector.js +9 -0
  105. package/charWidth.js +22 -0
  106. package/circular.js +19 -0
  107. package/circularSelector.js +4 -0
  108. package/clickAndDragUtils.js +576 -0
  109. package/coerceInitialValue.js +7 -0
  110. package/combineReducersDontIgnoreKeys.js +12 -0
  111. package/commandUtils.js +20 -0
  112. package/constants.js +2 -0
  113. package/copyOptions.js +34 -0
  114. package/createFragmentLines.js +120 -0
  115. package/createMergedDefaultStateReducer.js +30 -0
  116. package/createMetaAction.js +12 -0
  117. package/createSequenceInputPopup.js +290 -0
  118. package/createSequenceInputPopupStyle.css +87 -0
  119. package/createSimpleDialog.js +89 -0
  120. package/createYourOwnEnzyme.js +39 -0
  121. package/cutsiteLabelColorSelector.js +6 -0
  122. package/cutsiteTool.js +88 -0
  123. package/cutsitesByRangeSelector.js +5 -0
  124. package/cutsitesSelector.js +61 -0
  125. package/darkmode.css +98 -0
  126. package/defaultConfig.js +150 -0
  127. package/deletionLayers.js +36 -0
  128. package/description.js +21 -0
  129. package/digestTool.js +34 -0
  130. package/dnaToColor.js +17 -0
  131. package/downloadTool.js +39 -0
  132. package/draggableClassnames.js +5 -0
  133. package/drawAnnotations.js +440 -0
  134. package/drawDirectedPiePiece.js +142 -0
  135. package/editTool.js +49 -0
  136. package/editorSelector.js +2 -0
  137. package/editorUtils.js +205 -0
  138. package/estimateRowHeight.js +184 -0
  139. package/featureLengthsToHide.js +27 -0
  140. package/featureTool.js +34 -0
  141. package/features.js +19 -0
  142. package/featuresSelector.js +8 -0
  143. package/filteredCutsitesSelector.js +136 -0
  144. package/filteredFeaturesSelector.js +32 -0
  145. package/filteredPartsSelector.js +57 -0
  146. package/filteredPrimersSelector.js +27 -0
  147. package/filteredRestrictionEnzymesSelector.js +1 -0
  148. package/find.png +0 -0
  149. package/findTool.js +79 -0
  150. package/findToolConstants.js +1 -0
  151. package/frameTranslations.js +52 -0
  152. package/fullscreen.png +0 -0
  153. package/getAdditionalEnzymesSelector.js +46 -0
  154. package/getAngleForPositionMidpoint.js +3 -0
  155. package/getAnnotationClassnames.js +12 -0
  156. package/getAnnotationNameAndStartStopString.js +61 -0
  157. package/getBpsPerRow.js +19 -0
  158. package/getCutsiteLabelHeights.js +56 -0
  159. package/getGapMap.js +12 -0
  160. package/getGaps.js +27 -0
  161. package/getInternalLabel.js +40 -0
  162. package/getOveHotkeyDefs.js +12 -0
  163. package/getPairwiseOverviewLinearViewOptions.js +38 -0
  164. package/getRangeAnglesSpecial.js +12 -0
  165. package/getStructuredBases.js +97 -0
  166. package/getTrackFromEvent.js +25 -0
  167. package/getVisibleStartEnd.js +7 -0
  168. package/getXStartAndWidthFromNonCircularRange.js +12 -0
  169. package/getXStartAndWidthOfRangeWrtRow.js +27 -0
  170. package/getXStartAndWidthOfRowAnnotation.js +19 -0
  171. package/getYOffset.js +15 -0
  172. package/hoveredAnnotation.js +24 -0
  173. package/{html2canvas.esm--JN4fLQL.js → html2canvas.esm-DiGWN1gP.js} +187 -229
  174. package/{html2canvas.esm-B7d7VJmQ.cjs → html2canvas.esm-J1esNpMJ.cjs} +187 -229
  175. package/importTool.js +27 -0
  176. package/index.cjs.js +48165 -47142
  177. package/index.es.js +47699 -46676
  178. package/index.js +71 -0
  179. package/inlineFindTool.js +38 -0
  180. package/isElementInViewport.js +29 -0
  181. package/isEnzymeFilterAndSelector.js +1 -0
  182. package/isTargetWithinEl.js +6 -0
  183. package/labelLineIntensity.js +25 -0
  184. package/labelSize.js +23 -0
  185. package/ladderDefaults.js +25 -0
  186. package/lastSavedId.js +20 -0
  187. package/lineageLines.js +11 -0
  188. package/linear.png +0 -0
  189. package/makeStore.js +34 -0
  190. package/massageTickSpacing.js +19 -0
  191. package/materiallyAvailable.js +19 -0
  192. package/middleware.js +112 -0
  193. package/minimumOrfSize.js +24 -0
  194. package/minimumOrfSizeSelector.js +2 -0
  195. package/modalActions.js +3 -0
  196. package/moveCaret.js +58 -0
  197. package/name.js +19 -0
  198. package/normalizeAngle.js +3 -0
  199. package/normalizeAngleRange.js +9 -0
  200. package/oligoTool.js +30 -0
  201. package/onlyUpdateForKeysDeep.js +31 -0
  202. package/orfFrameToColorMap.js +10 -0
  203. package/orfTool.js +136 -0
  204. package/orfsSelector.js +15 -0
  205. package/ove.css +12107 -0
  206. package/package.json +6 -5
  207. package/panelsShown.js +294 -0
  208. package/partLengthsToHide.js +23 -0
  209. package/partOverhangs.js +6 -0
  210. package/partTagSearch.js +69 -0
  211. package/partTool.js +45 -0
  212. package/parts.js +19 -0
  213. package/partsSelector.js +8 -0
  214. package/pie.png +0 -0
  215. package/polarToSpecialCartesian.js +7 -0
  216. package/positionCutsites.js +6 -0
  217. package/prepareRowData.js +64 -0
  218. package/primerBases.js +221 -0
  219. package/primerLengthsToHide.js +27 -0
  220. package/primers.js +19 -0
  221. package/primersSelector.js +8 -0
  222. package/print.png +0 -0
  223. package/printTool.js +31 -0
  224. package/propertiesTool.js +40 -0
  225. package/proteinUtils.js +3 -0
  226. package/pureNoFunc.js +18 -0
  227. package/readOnly.js +25 -0
  228. package/redoTool.js +30 -0
  229. package/reflex-styles.css +128 -0
  230. package/reflex-styles.css.map +9 -0
  231. package/relaxLabelAngles.js +157 -0
  232. package/relaxLabels_DEPRECATED.js +105 -0
  233. package/replacementLayers.js +36 -0
  234. package/restrictionEnzymes.js +52 -0
  235. package/restrictionEnzymesSelector.js +34 -0
  236. package/rowviewContants.js +3 -0
  237. package/ruler.css +89 -0
  238. package/save.png +0 -0
  239. package/saveTool.js +44 -0
  240. package/searchLayersSelector.js +71 -0
  241. package/selectedAnnotations.js +89 -0
  242. package/selectedAnnotationsSelector.js +1 -0
  243. package/selectedCutsitesSelector.js +21 -0
  244. package/selectedPartTags.js +21 -0
  245. package/selectionLayer.js +25 -0
  246. package/selectors/annotationSearchSelector.d.ts +1 -1
  247. package/sequence.js +12 -0
  248. package/sequenceDataHistory.js +43 -0
  249. package/sequenceDataSelector.js +2 -0
  250. package/sequenceLengthSelector.js +5 -0
  251. package/sequenceSelector.js +4 -0
  252. package/sharedActionCreators.js +0 -0
  253. package/shouldFlipText.js +4 -0
  254. package/shouldRerender.js +27 -0
  255. package/showFileDialog.js +25 -0
  256. package/showGCContent.js +23 -0
  257. package/show_cut_sites.png +0 -0
  258. package/show_features.png +0 -0
  259. package/show_orfs.png +0 -0
  260. package/show_primers.png +0 -0
  261. package/simpleDialog.css +13 -0
  262. package/specialCutsiteFilterOptions.js +22 -0
  263. package/src/Editor/DropHandler.js +2 -1
  264. package/src/Editor/index.js +0 -2
  265. package/src/RowItem/StackedAnnotations/getStructuredBases.js +20 -6
  266. package/src/ToolBar/cutsiteTool.js +1 -1
  267. package/src/helperComponents/PropertiesDialog/TranslationProperties.js +2 -1
  268. package/style.css +3 -12100
  269. package/tagsToBoldSelector.js +2 -0
  270. package/toggle_views.svg +1 -0
  271. package/toolBar.js +23 -0
  272. package/translationSearchMatchesSelector.js +14 -0
  273. package/translations.js +20 -0
  274. package/translationsRawSelector.js +8 -0
  275. package/translationsSelector.js +137 -0
  276. package/typeField.js +24 -0
  277. package/undoTool.js +30 -0
  278. package/updateEditor.d.ts +1 -3
  279. package/updateEditor.js +200 -0
  280. package/updateLabelsForInViewFeatures.js +55 -0
  281. package/updateLabelsForInViewFeaturesCircView.js +41 -0
  282. package/updateTrackHelper.js +58 -0
  283. package/uppercaseSequenceMapFont.js +25 -0
  284. package/upsertDeleteActionGenerator.js +31 -0
  285. package/useAAColorType.js +8 -0
  286. package/useAdditionalOrfStartCodons.js +24 -0
  287. package/useAnnotationLimits.js +42 -0
  288. package/useChromatogramPrefs.js +31 -0
  289. package/useFormValue.js +7 -0
  290. package/useLadders.js +6 -0
  291. package/useMeltingTemp.js +7 -0
  292. package/useTmType.js +10 -0
  293. package/userDefinedHandlersAndOpts.js +61 -0
  294. package/utils/getAnnotationNameAndStartStopString.d.ts +1 -5
  295. package/utils/selectionLayer.d.ts +2 -2
  296. package/utils.js +37 -0
  297. package/versionHistory.js +26 -0
  298. package/versionHistoryTool.js +21 -0
  299. package/viewSubmenu.js +479 -0
  300. package/visibilityTool.js +39 -0
  301. package/withEditorInteractions/getBpsPerRow.d.ts +1 -3
  302. package/withHover.js +113 -0
  303. package/withRestrictionEnzymes.js +15 -0
  304. package/index.umd.js +0 -188322

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