@teselagen/ove 0.7.22 → 0.7.24

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (4) hide show
  1. package/index.cjs.js +6 -14
  2. package/index.es.js +6 -14
  3. package/index.umd.js +6 -14
  4. package/package.json +6 -18
package/index.cjs.js CHANGED
@@ -68607,19 +68607,7 @@ function DNALoader({ style: style2, className }) {
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  }
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  __name(DNALoader, "DNALoader");
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  function BounceLoader({ style: style2, className }) {
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- return /* @__PURE__ */ React$3.createElement(
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- "div",
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- {
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- "data-testid": "bounce-loader",
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- className: classNames("tg-bounce-loader", className),
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- style: style2
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- },
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- /* @__PURE__ */ React$3.createElement("div", { className: "rect1" }),
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- /* @__PURE__ */ React$3.createElement("div", { className: "rect2" }),
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- /* @__PURE__ */ React$3.createElement("div", { className: "rect3" }),
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- /* @__PURE__ */ React$3.createElement("div", { className: "rect4" }),
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- /* @__PURE__ */ React$3.createElement("div", { className: "rect5" })
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- );
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+ return /* @__PURE__ */ React$3.createElement("div", { className: classNames("tg-bounce-loader", className), style: style2 }, /* @__PURE__ */ React$3.createElement("div", { className: "rect1" }), /* @__PURE__ */ React$3.createElement("div", { className: "rect2" }), /* @__PURE__ */ React$3.createElement("div", { className: "rect3" }), /* @__PURE__ */ React$3.createElement("div", { className: "rect4" }), /* @__PURE__ */ React$3.createElement("div", { className: "rect5" }));
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  }
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  __name(BounceLoader, "BounceLoader");
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  const Loading = /* @__PURE__ */ __name(({
@@ -96684,6 +96672,9 @@ function abConverter(inputArrayBuffer) {
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  traceData.gTrace = this.getDataTag(tagDict.colorDataG);
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  traceData.cTrace = this.getDataTag(tagDict.colorDataC);
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  traceData.basePos = this.getDataTag(tagDict.peakLocations);
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+ if (traceData.basePos === void 0) {
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+ traceData.basePos = this.getDataTag(tagDict.peakLocationsUser);
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+ }
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  traceData.baseCalls = this.getDataTag(tagDict.baseCalls2);
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  traceData.qualNums = this.getDataTag(tagDict.qualNums);
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  if (traceData.qualNums) {
@@ -96711,6 +96702,7 @@ const tagDict = {
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  baseCalls2: { tagName: "PBAS", tagNum: 2, typeToReturn: "getChar" },
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  qualNums: { tagName: "PCON", tagNum: 2, typeToReturn: "getNumber" },
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  peakLocations: { tagName: "PLOC", tagNum: 2, typeToReturn: "getShort" },
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+ peakLocationsUser: { tagName: "PLOC", tagNum: 1, typeToReturn: "getShort" },
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  peakDev: { tagName: "P1RL", tagNum: 1, typeToReturn: "getShort" },
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  peakOneAmp: { tagName: "P1AM", tagNum: 1, typeToReturn: "getShort" },
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  colorDataA: { tagName: "DATA", tagNum: 10, typeToReturn: "getShort" },
@@ -123059,7 +123051,7 @@ function showFileDialog({ multiple = false, onSelect }) {
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  }
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  __name(showFileDialog, "showFileDialog");
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  const name = "@teselagen/ove";
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- const version = "0.7.21";
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+ const version = "0.7.23";
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  const main = "./src/index.js";
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  const type = "module";
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  const exports$1 = {
package/index.es.js CHANGED
@@ -68589,19 +68589,7 @@ function DNALoader({ style: style2, className }) {
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  }
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  __name(DNALoader, "DNALoader");
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  function BounceLoader({ style: style2, className }) {
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- return /* @__PURE__ */ React__default$1.createElement(
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- "div",
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- {
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- "data-testid": "bounce-loader",
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- className: classNames("tg-bounce-loader", className),
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- style: style2
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- },
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- /* @__PURE__ */ React__default$1.createElement("div", { className: "rect1" }),
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- /* @__PURE__ */ React__default$1.createElement("div", { className: "rect2" }),
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- /* @__PURE__ */ React__default$1.createElement("div", { className: "rect3" }),
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- /* @__PURE__ */ React__default$1.createElement("div", { className: "rect4" }),
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- /* @__PURE__ */ React__default$1.createElement("div", { className: "rect5" })
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- );
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+ return /* @__PURE__ */ React__default$1.createElement("div", { className: classNames("tg-bounce-loader", className), style: style2 }, /* @__PURE__ */ React__default$1.createElement("div", { className: "rect1" }), /* @__PURE__ */ React__default$1.createElement("div", { className: "rect2" }), /* @__PURE__ */ React__default$1.createElement("div", { className: "rect3" }), /* @__PURE__ */ React__default$1.createElement("div", { className: "rect4" }), /* @__PURE__ */ React__default$1.createElement("div", { className: "rect5" }));
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  }
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  __name(BounceLoader, "BounceLoader");
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  const Loading = /* @__PURE__ */ __name(({
@@ -96666,6 +96654,9 @@ function abConverter(inputArrayBuffer) {
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  traceData.gTrace = this.getDataTag(tagDict.colorDataG);
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  traceData.cTrace = this.getDataTag(tagDict.colorDataC);
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  traceData.basePos = this.getDataTag(tagDict.peakLocations);
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+ if (traceData.basePos === void 0) {
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+ traceData.basePos = this.getDataTag(tagDict.peakLocationsUser);
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+ }
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  traceData.baseCalls = this.getDataTag(tagDict.baseCalls2);
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  traceData.qualNums = this.getDataTag(tagDict.qualNums);
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  if (traceData.qualNums) {
@@ -96693,6 +96684,7 @@ const tagDict = {
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  baseCalls2: { tagName: "PBAS", tagNum: 2, typeToReturn: "getChar" },
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  qualNums: { tagName: "PCON", tagNum: 2, typeToReturn: "getNumber" },
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  peakLocations: { tagName: "PLOC", tagNum: 2, typeToReturn: "getShort" },
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+ peakLocationsUser: { tagName: "PLOC", tagNum: 1, typeToReturn: "getShort" },
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  peakDev: { tagName: "P1RL", tagNum: 1, typeToReturn: "getShort" },
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  peakOneAmp: { tagName: "P1AM", tagNum: 1, typeToReturn: "getShort" },
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  colorDataA: { tagName: "DATA", tagNum: 10, typeToReturn: "getShort" },
@@ -123041,7 +123033,7 @@ function showFileDialog({ multiple = false, onSelect }) {
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  }
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  __name(showFileDialog, "showFileDialog");
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  const name = "@teselagen/ove";
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- const version = "0.7.21";
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+ const version = "0.7.23";
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  const main = "./src/index.js";
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  const type = "module";
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  const exports$1 = {
package/index.umd.js CHANGED
@@ -97336,19 +97336,7 @@ ${latestSubscriptionCallbackError.current.stack}
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  }
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  __name(DNALoader, "DNALoader");
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  function BounceLoader({ style: style2, className }) {
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- return /* @__PURE__ */ React$5.createElement(
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- "div",
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- {
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- "data-testid": "bounce-loader",
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- className: classNames$1("tg-bounce-loader", className),
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- style: style2
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- },
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- /* @__PURE__ */ React$5.createElement("div", { className: "rect1" }),
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- /* @__PURE__ */ React$5.createElement("div", { className: "rect2" }),
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- /* @__PURE__ */ React$5.createElement("div", { className: "rect3" }),
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- /* @__PURE__ */ React$5.createElement("div", { className: "rect4" }),
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- /* @__PURE__ */ React$5.createElement("div", { className: "rect5" })
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- );
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+ return /* @__PURE__ */ React$5.createElement("div", { className: classNames$1("tg-bounce-loader", className), style: style2 }, /* @__PURE__ */ React$5.createElement("div", { className: "rect1" }), /* @__PURE__ */ React$5.createElement("div", { className: "rect2" }), /* @__PURE__ */ React$5.createElement("div", { className: "rect3" }), /* @__PURE__ */ React$5.createElement("div", { className: "rect4" }), /* @__PURE__ */ React$5.createElement("div", { className: "rect5" }));
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  }
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  __name(BounceLoader, "BounceLoader");
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  const Loading = /* @__PURE__ */ __name(({
@@ -125333,6 +125321,9 @@ ${latestSubscriptionCallbackError.current.stack}
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  traceData.gTrace = this.getDataTag(tagDict.colorDataG);
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  traceData.cTrace = this.getDataTag(tagDict.colorDataC);
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  traceData.basePos = this.getDataTag(tagDict.peakLocations);
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+ if (traceData.basePos === void 0) {
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+ traceData.basePos = this.getDataTag(tagDict.peakLocationsUser);
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+ }
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  traceData.baseCalls = this.getDataTag(tagDict.baseCalls2);
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  traceData.qualNums = this.getDataTag(tagDict.qualNums);
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  if (traceData.qualNums) {
@@ -125360,6 +125351,7 @@ ${latestSubscriptionCallbackError.current.stack}
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  baseCalls2: { tagName: "PBAS", tagNum: 2, typeToReturn: "getChar" },
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  qualNums: { tagName: "PCON", tagNum: 2, typeToReturn: "getNumber" },
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  peakLocations: { tagName: "PLOC", tagNum: 2, typeToReturn: "getShort" },
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+ peakLocationsUser: { tagName: "PLOC", tagNum: 1, typeToReturn: "getShort" },
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  peakDev: { tagName: "P1RL", tagNum: 1, typeToReturn: "getShort" },
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  peakOneAmp: { tagName: "P1AM", tagNum: 1, typeToReturn: "getShort" },
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  colorDataA: { tagName: "DATA", tagNum: 10, typeToReturn: "getShort" },
@@ -150936,7 +150928,7 @@ Part of ${annotation.translationType} Translation from BPs ${annotation.start +
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  }
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  __name(showFileDialog, "showFileDialog");
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  const name = "@teselagen/ove";
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- const version = "0.7.21";
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+ const version = "0.7.23";
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  const main = "./src/index.js";
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  const type = "module";
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  const exports$1 = {
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
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  {
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  "name": "@teselagen/ove",
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- "version": "0.7.22",
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+ "version": "0.7.24",
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  "main": "./src/index.js",
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  "type": "module",
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  "exports": {
@@ -11,17 +11,15 @@
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  "./*": "./*"
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  },
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  "dependencies": {
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- "@teselagen/sequence-utils": "0.3.27",
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+ "@teselagen/sequence-utils": "0.3.28",
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  "@teselagen/range-utils": "0.3.10",
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- "@teselagen/ui": "0.7.22",
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+ "@teselagen/ui": "0.7.23",
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  "@teselagen/file-utils": "0.3.18",
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- "@teselagen/bounce-loader": "0.3.11",
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- "@teselagen/bio-parsers": "0.4.22",
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+ "@teselagen/bio-parsers": "0.4.24",
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  "@blueprintjs/core": "3.54.0",
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  "@blueprintjs/datetime": "^3.24.1",
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  "@blueprintjs/icons": "3.33.0",
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  "@blueprintjs/select": "3.18.11",
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- "@dnd-kit/core": "^6.1.0",
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  "@dnd-kit/modifiers": "^7.0.0",
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  "@dnd-kit/sortable": "^8.0.0",
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  "@dnd-kit/utilities": "3.2.2",
@@ -29,22 +27,19 @@
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  "@risingstack/react-easy-state": "^6.3.0",
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  "@teselagen/react-list": "0.8.18",
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  "@teselagen/react-table": "6.10.16",
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- "@use-gesture/react": "^10.2.23",
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  "bluebird": "3.7.2",
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  "bson-objectid": "2.0.4",
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- "buffer": "5.7.1",
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+ "buffer": "6.0.3",
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  "bufferpack": "0.0.6",
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  "classnames": "^2.3.2",
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  "color": "^3.2.1",
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  "combokeys": "^3.0.1",
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  "copy-to-clipboard": "^3.3.1",
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- "dayjs": "^1.10.4",
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  "deep-equal": "^1.1.1",
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  "dom-scroll-into-view": "^2.0.1",
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  "dom-to-image": "^2.6.0",
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  "downloadjs": "^1.4.7",
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- "escape-string-regexp": "1.0.5",
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- "fast-xml-parser": "4.3.5",
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+ "escape-string-regexp": "5.0.0",
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  "fflate": "0.8.2",
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  "file-saver": "^2.0.5",
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  "fuse.js": "^6.6.2",
@@ -57,16 +52,12 @@
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  "lodash": "4.17.21",
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  "lodash-es": "^4.17.21",
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  "math-expression-evaluator": "^1.3.7",
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- "mobx": "^6.10.2",
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- "mock-fs": "5.2.0",
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- "nanoid": "^4.0.0",
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  "node-interval-tree": "^1.3.3",
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  "papaparse": "5.3.2",
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  "paths-js": "^0.4.11",
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  "pluralize": "^7.0.0",
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  "popper.js": "^1.16.1",
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  "prop-types": "^15.6.2",
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- "qs": "^6.9.6",
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  "react": "^18.3.1",
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  "react-color": "^2.19.3",
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  "react-dom": "^18.3.1",
@@ -75,8 +66,6 @@
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  "react-markdown": "9.0.1",
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  "react-measure": "^2.5.2",
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  "react-redux": "^8.0.5",
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- "react-rnd": "^10.2.4",
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- "react-router-dom": "4",
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  "react-sizeme": "^2.6.12",
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  "react-transition-group": "^2.4.0",
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  "recompose": "npm:react-recompose@0.31.1",
@@ -86,7 +75,6 @@
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  "redux-thunk": "2.4.1",
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  "remark-gfm": "^4.0.0",
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  "reselect": "^4.1.7",
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- "shortid": "^2.2.16",
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  "tg-use-local-storage-state": "^16.0.3",
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  "tippy.js": "^6.3.7",
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  "to-regex-range": "5.0.1",