@teselagen/ove 0.3.20 → 0.3.22
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/index.cjs.js +67 -44
- package/index.es.js +67 -44
- package/index.umd.js +86 -70
- package/package.json +1 -1
- package/src/RowItem/Sequence.js +2 -2
- package/src/RowItem/StackedAnnotations/primerBases.js +1 -1
- package/src/commands/index.js +4 -1
package/index.cjs.js
CHANGED
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@@ -7425,7 +7425,7 @@ function getPlainObjectKeys(object) {
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var ownKeys$8 = typeof Reflect !== "undefined" && Reflect.ownKeys ? Reflect.ownKeys : hasGetOwnPropertySymbols ? function (obj) {
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return Object.getOwnPropertyNames(obj).concat(Object.getOwnPropertySymbols(obj));
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} : /* istanbul ignore next */Object.getOwnPropertyNames;
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function toPrimitive$
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function toPrimitive$2(value) {
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return value === null ? null : typeof value === "object" ? "" + value : value;
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}
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function hasProp(target, prop) {
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@@ -8354,7 +8354,7 @@ var ObservableValue = /*#__PURE__*/function (_Atom) {
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return this.name_ + "[" + this.value_ + "]";
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};
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_proto.valueOf = function valueOf() {
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return toPrimitive$
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return toPrimitive$2(this.get());
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};
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_proto[_Symbol$toPrimitive] = function () {
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return this.valueOf();
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@@ -8582,7 +8582,7 @@ var ComputedValue = /*#__PURE__*/function () {
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return this.name_ + "[" + this.derivation.toString() + "]";
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};
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_proto.valueOf = function valueOf() {
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return toPrimitive$
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return toPrimitive$2(this.get());
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};
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_proto[_Symbol$toPrimitive$1] = function () {
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return this.valueOf();
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@@ -30282,10 +30282,18 @@ var _fails = function (exec) {
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}
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};
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var
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-
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var _descriptors;
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var hasRequired_descriptors;
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function require_descriptors () {
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if (hasRequired_descriptors) return _descriptors;
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hasRequired_descriptors = 1;
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// Thank's IE8 for his funny defineProperty
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_descriptors = !_fails(function () {
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return Object.defineProperty({}, 'a', { get: function () { return 7; } }).a != 7;
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});
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return _descriptors;
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}
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var _domCreate;
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var hasRequired_domCreate;
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@@ -30303,9 +30311,17 @@ function require_domCreate () {
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return _domCreate;
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}
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var _ie8DomDefine
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var _ie8DomDefine;
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var hasRequired_ie8DomDefine;
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function require_ie8DomDefine () {
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if (hasRequired_ie8DomDefine) return _ie8DomDefine;
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hasRequired_ie8DomDefine = 1;
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_ie8DomDefine = !require_descriptors() && !_fails(function () {
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return Object.defineProperty(require_domCreate()('div'), 'a', { get: function () { return 7; } }).a != 7;
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});
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return _ie8DomDefine;
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}
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// 7.1.1 ToPrimitive(input [, PreferredType])
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var isObject$d = _isObject;
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@@ -30320,22 +30336,29 @@ var _toPrimitive$1 = function (it, S) {
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throw TypeError("Can't convert object to primitive value");
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};
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var
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var IE8_DOM_DEFINE$1 = _ie8DomDefine;
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var toPrimitive$2 = _toPrimitive$1;
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var dP$3 = Object.defineProperty;
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var hasRequired_objectDp;
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function require_objectDp () {
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if (hasRequired_objectDp) return _objectDp;
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hasRequired_objectDp = 1;
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var anObject = _anObject;
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var IE8_DOM_DEFINE = require_ie8DomDefine();
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var toPrimitive = _toPrimitive$1;
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var dP = Object.defineProperty;
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_objectDp.f = require_descriptors() ? Object.defineProperty : function defineProperty(O, P, Attributes) {
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anObject(O);
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P = toPrimitive(P, true);
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anObject(Attributes);
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if (IE8_DOM_DEFINE) try {
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return dP(O, P, Attributes);
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} catch (e) { /* empty */ }
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if ('get' in Attributes || 'set' in Attributes) throw TypeError('Accessors not supported!');
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if ('value' in Attributes) O[P] = Attributes.value;
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return O;
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};
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return _objectDp;
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}
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var _propertyDesc = function (bitmap, value) {
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return {
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};
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};
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var dP$2 =
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var dP$2 = require_objectDp();
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var createDesc$3 = _propertyDesc;
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-
var _hide =
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var _hide = require_descriptors() ? function (object, key, value) {
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return dP$2.f(object, key, createDesc$3(1, value));
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} : function (object, key, value) {
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object[key] = value;
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@@ -30593,7 +30616,7 @@ function require_objectAssign () {
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if (hasRequired_objectAssign) return _objectAssign;
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hasRequired_objectAssign = 1;
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// 19.1.2.1 Object.assign(target, source, ...)
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var DESCRIPTORS =
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var DESCRIPTORS = require_descriptors();
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var getKeys = _objectKeys;
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var gOPS = _objectGops;
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var pIE = require_objectPie();
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@@ -30669,11 +30692,11 @@ var _iterators = {};
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var _redefine = _hide;
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var dP$1 =
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var dP$1 = require_objectDp();
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var anObject$4 = _anObject;
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var getKeys$1 = _objectKeys;
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var _objectDps =
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var _objectDps = require_descriptors() ? Object.defineProperties : function defineProperties(O, Properties) {
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anObject$4(O);
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var keys = getKeys$1(Properties);
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var length = keys.length;
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@@ -30752,7 +30775,7 @@ $exports.store = store$2;
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var _wksExports = _wks.exports;
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var def =
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var def = require_objectDp().f;
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var has$c = _has;
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var TAG$1 = _wksExports('toStringTag');
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var $defineProperty$2 =
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var $defineProperty$2 = require_objectDp();
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var createDesc$2 = _propertyDesc;
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var _createProperty = function (object, index, value) {
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var $export$3 = _export;
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// 19.1.2.4 / 15.2.3.6 Object.defineProperty(O, P, Attributes)
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$export$3($export$3.S + $export$3.F * !
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$export$3($export$3.S + $export$3.F * !require_descriptors(), 'Object', { defineProperty: require_objectDp().f });
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var $Object$2 = _coreExports.Object;
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var defineProperty$c = function defineProperty(it, key, desc) {
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var META$1 = _uid('meta');
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var isObject$c = _isObject;
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var has$a = _has;
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var setDesc =
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var setDesc = require_objectDp().f;
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var id$1 = 0;
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var isExtensible = Object.isExtensible || function () {
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var core = _coreExports;
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var wksExt$1 = _wksExt;
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var defineProperty$a =
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var defineProperty$a = require_objectDp().f;
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var _wksDefine = function (name) {
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var $Symbol = core.Symbol || (core.Symbol = {} );
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if (name.charAt(0) != '_' && !(name in $Symbol)) defineProperty$a($Symbol, name, { value: wksExt$1.f(name) });
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var toIObject$1 = _toIobject;
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var toPrimitive$1 = _toPrimitive$1;
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var has$9 = _has;
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var IE8_DOM_DEFINE =
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var IE8_DOM_DEFINE = require_ie8DomDefine();
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var gOPD$5 = Object.getOwnPropertyDescriptor;
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_objectGopd.f =
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_objectGopd.f = require_descriptors() ? gOPD$5 : function getOwnPropertyDescriptor(O, P) {
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O = toIObject$1(O);
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if (IE8_DOM_DEFINE) try {
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@@ -31384,7 +31407,7 @@ _objectGopd.f = _descriptors ? gOPD$5 : function getOwnPropertyDescriptor(O, P)
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// ECMAScript 6 symbols shim
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var global$2 = _globalExports;
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var has$8 = _has;
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var DESCRIPTORS =
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var DESCRIPTORS = require_descriptors();
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var $export$2 = _export;
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var redefine = _redefine;
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var META = _metaExports.KEY;
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@@ -31407,7 +31430,7 @@ var _create$1 = _objectCreate;
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var gOPNExt = _objectGopnExt;
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var $GOPD = _objectGopd;
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var $GOPS = _objectGops;
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var $DP =
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var $DP = require_objectDp();
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var $keys$1 = _objectKeys;
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var gOPD$4 = $GOPD.f;
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var dP = $DP.f;
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@@ -155917,7 +155940,7 @@ class Sequence extends React$3.Component {
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key: i,
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...{
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...shared,
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textLength: textLength - fudge - fudge2,
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textLength: Math.max(0, textLength - fudge - fudge2),
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x: x + fudge / 2,
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lengthAdjust: "spacing"
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}
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@@ -155932,7 +155955,7 @@ class Sequence extends React$3.Component {
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...{
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...shared,
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x: 0 + fudge / 2,
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textLength: (alignmentData ? seqReadWidth : width) - fudge - fudge2
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textLength: Math.max(0, (alignmentData ? seqReadWidth : width) - fudge - fudge2)
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}
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},
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getBoldRegion({ sequence, overlapToBold, rowStart, sequenceLength })
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@@ -157614,7 +157637,7 @@ function getBasesToShow({
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insertStart
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});
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}
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const textLength2 = charWidth * i.bases.length - fudge - fudge2;
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const textLength2 = Math.max(0, charWidth * i.bases.length - fudge - fudge2);
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insertText.push(
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/* @__PURE__ */ React$3.createElement(
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"text",
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@@ -161185,7 +161208,7 @@ function showFileDialog({ multiple = false, onSelect }) {
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}
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const name = "@teselagen/ove";
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const version = "0.3.
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const version = "0.3.21";
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const main = "./src/index.js";
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const exports$1 = {
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".": {
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@@ -162653,7 +162676,7 @@ const editCommandDefs = {
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},
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useGtgAndCtgAsStartCodons: {
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isHidden: isProtein,
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-
name: "Use GTG And CTG As Start Codons",
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name: (props) => isRna(props) ? "Use GUG And CUG As Start Codons" : "Use GTG And CTG As Start Codons",
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isActive: (props) => props.useAdditionalOrfStartCodons,
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handler: (props) => props.useAdditionalOrfStartCodonsToggle()
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},
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package/index.es.js
CHANGED
|
@@ -7404,7 +7404,7 @@ function getPlainObjectKeys(object) {
|
|
|
7404
7404
|
var ownKeys$8 = typeof Reflect !== "undefined" && Reflect.ownKeys ? Reflect.ownKeys : hasGetOwnPropertySymbols ? function (obj) {
|
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return Object.getOwnPropertyNames(obj).concat(Object.getOwnPropertySymbols(obj));
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} : /* istanbul ignore next */Object.getOwnPropertyNames;
|
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7407
|
-
function toPrimitive$
|
|
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|
+
function toPrimitive$2(value) {
|
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|
return value === null ? null : typeof value === "object" ? "" + value : value;
|
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}
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|
function hasProp(target, prop) {
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@@ -8333,7 +8333,7 @@ var ObservableValue = /*#__PURE__*/function (_Atom) {
|
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8333
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|
return this.name_ + "[" + this.value_ + "]";
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};
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8335
8335
|
_proto.valueOf = function valueOf() {
|
|
8336
|
-
return toPrimitive$
|
|
8336
|
+
return toPrimitive$2(this.get());
|
|
8337
8337
|
};
|
|
8338
8338
|
_proto[_Symbol$toPrimitive] = function () {
|
|
8339
8339
|
return this.valueOf();
|
|
@@ -8561,7 +8561,7 @@ var ComputedValue = /*#__PURE__*/function () {
|
|
|
8561
8561
|
return this.name_ + "[" + this.derivation.toString() + "]";
|
|
8562
8562
|
};
|
|
8563
8563
|
_proto.valueOf = function valueOf() {
|
|
8564
|
-
return toPrimitive$
|
|
8564
|
+
return toPrimitive$2(this.get());
|
|
8565
8565
|
};
|
|
8566
8566
|
_proto[_Symbol$toPrimitive$1] = function () {
|
|
8567
8567
|
return this.valueOf();
|
|
@@ -30261,10 +30261,18 @@ var _fails = function (exec) {
|
|
|
30261
30261
|
}
|
|
30262
30262
|
};
|
|
30263
30263
|
|
|
30264
|
-
|
|
30265
|
-
var
|
|
30266
|
-
|
|
30267
|
-
|
|
30264
|
+
var _descriptors;
|
|
30265
|
+
var hasRequired_descriptors;
|
|
30266
|
+
|
|
30267
|
+
function require_descriptors () {
|
|
30268
|
+
if (hasRequired_descriptors) return _descriptors;
|
|
30269
|
+
hasRequired_descriptors = 1;
|
|
30270
|
+
// Thank's IE8 for his funny defineProperty
|
|
30271
|
+
_descriptors = !_fails(function () {
|
|
30272
|
+
return Object.defineProperty({}, 'a', { get: function () { return 7; } }).a != 7;
|
|
30273
|
+
});
|
|
30274
|
+
return _descriptors;
|
|
30275
|
+
}
|
|
30268
30276
|
|
|
30269
30277
|
var _domCreate;
|
|
30270
30278
|
var hasRequired_domCreate;
|
|
@@ -30282,9 +30290,17 @@ function require_domCreate () {
|
|
|
30282
30290
|
return _domCreate;
|
|
30283
30291
|
}
|
|
30284
30292
|
|
|
30285
|
-
var _ie8DomDefine
|
|
30286
|
-
|
|
30287
|
-
|
|
30293
|
+
var _ie8DomDefine;
|
|
30294
|
+
var hasRequired_ie8DomDefine;
|
|
30295
|
+
|
|
30296
|
+
function require_ie8DomDefine () {
|
|
30297
|
+
if (hasRequired_ie8DomDefine) return _ie8DomDefine;
|
|
30298
|
+
hasRequired_ie8DomDefine = 1;
|
|
30299
|
+
_ie8DomDefine = !require_descriptors() && !_fails(function () {
|
|
30300
|
+
return Object.defineProperty(require_domCreate()('div'), 'a', { get: function () { return 7; } }).a != 7;
|
|
30301
|
+
});
|
|
30302
|
+
return _ie8DomDefine;
|
|
30303
|
+
}
|
|
30288
30304
|
|
|
30289
30305
|
// 7.1.1 ToPrimitive(input [, PreferredType])
|
|
30290
30306
|
var isObject$d = _isObject;
|
|
@@ -30299,22 +30315,29 @@ var _toPrimitive$1 = function (it, S) {
|
|
|
30299
30315
|
throw TypeError("Can't convert object to primitive value");
|
|
30300
30316
|
};
|
|
30301
30317
|
|
|
30302
|
-
var
|
|
30303
|
-
var IE8_DOM_DEFINE$1 = _ie8DomDefine;
|
|
30304
|
-
var toPrimitive$2 = _toPrimitive$1;
|
|
30305
|
-
var dP$3 = Object.defineProperty;
|
|
30318
|
+
var hasRequired_objectDp;
|
|
30306
30319
|
|
|
30307
|
-
|
|
30308
|
-
|
|
30309
|
-
|
|
30310
|
-
|
|
30311
|
-
|
|
30312
|
-
|
|
30313
|
-
|
|
30314
|
-
|
|
30315
|
-
|
|
30316
|
-
|
|
30317
|
-
|
|
30320
|
+
function require_objectDp () {
|
|
30321
|
+
if (hasRequired_objectDp) return _objectDp;
|
|
30322
|
+
hasRequired_objectDp = 1;
|
|
30323
|
+
var anObject = _anObject;
|
|
30324
|
+
var IE8_DOM_DEFINE = require_ie8DomDefine();
|
|
30325
|
+
var toPrimitive = _toPrimitive$1;
|
|
30326
|
+
var dP = Object.defineProperty;
|
|
30327
|
+
|
|
30328
|
+
_objectDp.f = require_descriptors() ? Object.defineProperty : function defineProperty(O, P, Attributes) {
|
|
30329
|
+
anObject(O);
|
|
30330
|
+
P = toPrimitive(P, true);
|
|
30331
|
+
anObject(Attributes);
|
|
30332
|
+
if (IE8_DOM_DEFINE) try {
|
|
30333
|
+
return dP(O, P, Attributes);
|
|
30334
|
+
} catch (e) { /* empty */ }
|
|
30335
|
+
if ('get' in Attributes || 'set' in Attributes) throw TypeError('Accessors not supported!');
|
|
30336
|
+
if ('value' in Attributes) O[P] = Attributes.value;
|
|
30337
|
+
return O;
|
|
30338
|
+
};
|
|
30339
|
+
return _objectDp;
|
|
30340
|
+
}
|
|
30318
30341
|
|
|
30319
30342
|
var _propertyDesc = function (bitmap, value) {
|
|
30320
30343
|
return {
|
|
@@ -30325,9 +30348,9 @@ var _propertyDesc = function (bitmap, value) {
|
|
|
30325
30348
|
};
|
|
30326
30349
|
};
|
|
30327
30350
|
|
|
30328
|
-
var dP$2 =
|
|
30351
|
+
var dP$2 = require_objectDp();
|
|
30329
30352
|
var createDesc$3 = _propertyDesc;
|
|
30330
|
-
var _hide =
|
|
30353
|
+
var _hide = require_descriptors() ? function (object, key, value) {
|
|
30331
30354
|
return dP$2.f(object, key, createDesc$3(1, value));
|
|
30332
30355
|
} : function (object, key, value) {
|
|
30333
30356
|
object[key] = value;
|
|
@@ -30572,7 +30595,7 @@ function require_objectAssign () {
|
|
|
30572
30595
|
if (hasRequired_objectAssign) return _objectAssign;
|
|
30573
30596
|
hasRequired_objectAssign = 1;
|
|
30574
30597
|
// 19.1.2.1 Object.assign(target, source, ...)
|
|
30575
|
-
var DESCRIPTORS =
|
|
30598
|
+
var DESCRIPTORS = require_descriptors();
|
|
30576
30599
|
var getKeys = _objectKeys;
|
|
30577
30600
|
var gOPS = _objectGops;
|
|
30578
30601
|
var pIE = require_objectPie();
|
|
@@ -30648,11 +30671,11 @@ var _iterators = {};
|
|
|
30648
30671
|
|
|
30649
30672
|
var _redefine = _hide;
|
|
30650
30673
|
|
|
30651
|
-
var dP$1 =
|
|
30674
|
+
var dP$1 = require_objectDp();
|
|
30652
30675
|
var anObject$4 = _anObject;
|
|
30653
30676
|
var getKeys$1 = _objectKeys;
|
|
30654
30677
|
|
|
30655
|
-
var _objectDps =
|
|
30678
|
+
var _objectDps = require_descriptors() ? Object.defineProperties : function defineProperties(O, Properties) {
|
|
30656
30679
|
anObject$4(O);
|
|
30657
30680
|
var keys = getKeys$1(Properties);
|
|
30658
30681
|
var length = keys.length;
|
|
@@ -30731,7 +30754,7 @@ $exports.store = store$2;
|
|
|
30731
30754
|
|
|
30732
30755
|
var _wksExports = _wks.exports;
|
|
30733
30756
|
|
|
30734
|
-
var def =
|
|
30757
|
+
var def = require_objectDp().f;
|
|
30735
30758
|
var has$c = _has;
|
|
30736
30759
|
var TAG$1 = _wksExports('toStringTag');
|
|
30737
30760
|
|
|
@@ -31045,7 +31068,7 @@ var _isArrayIter = function (it) {
|
|
|
31045
31068
|
return it !== undefined && (Iterators.Array === it || ArrayProto[ITERATOR] === it);
|
|
31046
31069
|
};
|
|
31047
31070
|
|
|
31048
|
-
var $defineProperty$2 =
|
|
31071
|
+
var $defineProperty$2 = require_objectDp();
|
|
31049
31072
|
var createDesc$2 = _propertyDesc;
|
|
31050
31073
|
|
|
31051
31074
|
var _createProperty = function (object, index, value) {
|
|
@@ -31178,7 +31201,7 @@ var _default$9 = function (instance, Constructor) {
|
|
|
31178
31201
|
|
|
31179
31202
|
var $export$3 = _export;
|
|
31180
31203
|
// 19.1.2.4 / 15.2.3.6 Object.defineProperty(O, P, Attributes)
|
|
31181
|
-
$export$3($export$3.S + $export$3.F * !
|
|
31204
|
+
$export$3($export$3.S + $export$3.F * !require_descriptors(), 'Object', { defineProperty: require_objectDp().f });
|
|
31182
31205
|
|
|
31183
31206
|
var $Object$2 = _coreExports.Object;
|
|
31184
31207
|
var defineProperty$c = function defineProperty(it, key, desc) {
|
|
@@ -31226,7 +31249,7 @@ var _meta = {exports: {}};
|
|
|
31226
31249
|
var META$1 = _uid('meta');
|
|
31227
31250
|
var isObject$c = _isObject;
|
|
31228
31251
|
var has$a = _has;
|
|
31229
|
-
var setDesc =
|
|
31252
|
+
var setDesc = require_objectDp().f;
|
|
31230
31253
|
var id$1 = 0;
|
|
31231
31254
|
var isExtensible = Object.isExtensible || function () {
|
|
31232
31255
|
return true;
|
|
@@ -31281,7 +31304,7 @@ var _metaExports = _meta.exports;
|
|
|
31281
31304
|
|
|
31282
31305
|
var core = _coreExports;
|
|
31283
31306
|
var wksExt$1 = _wksExt;
|
|
31284
|
-
var defineProperty$a =
|
|
31307
|
+
var defineProperty$a = require_objectDp().f;
|
|
31285
31308
|
var _wksDefine = function (name) {
|
|
31286
31309
|
var $Symbol = core.Symbol || (core.Symbol = {} );
|
|
31287
31310
|
if (name.charAt(0) != '_' && !(name in $Symbol)) defineProperty$a($Symbol, name, { value: wksExt$1.f(name) });
|
|
@@ -31348,10 +31371,10 @@ var createDesc$1 = _propertyDesc;
|
|
|
31348
31371
|
var toIObject$1 = _toIobject;
|
|
31349
31372
|
var toPrimitive$1 = _toPrimitive$1;
|
|
31350
31373
|
var has$9 = _has;
|
|
31351
|
-
var IE8_DOM_DEFINE =
|
|
31374
|
+
var IE8_DOM_DEFINE = require_ie8DomDefine();
|
|
31352
31375
|
var gOPD$5 = Object.getOwnPropertyDescriptor;
|
|
31353
31376
|
|
|
31354
|
-
_objectGopd.f =
|
|
31377
|
+
_objectGopd.f = require_descriptors() ? gOPD$5 : function getOwnPropertyDescriptor(O, P) {
|
|
31355
31378
|
O = toIObject$1(O);
|
|
31356
31379
|
P = toPrimitive$1(P, true);
|
|
31357
31380
|
if (IE8_DOM_DEFINE) try {
|
|
@@ -31363,7 +31386,7 @@ _objectGopd.f = _descriptors ? gOPD$5 : function getOwnPropertyDescriptor(O, P)
|
|
|
31363
31386
|
// ECMAScript 6 symbols shim
|
|
31364
31387
|
var global$2 = _globalExports;
|
|
31365
31388
|
var has$8 = _has;
|
|
31366
|
-
var DESCRIPTORS =
|
|
31389
|
+
var DESCRIPTORS = require_descriptors();
|
|
31367
31390
|
var $export$2 = _export;
|
|
31368
31391
|
var redefine = _redefine;
|
|
31369
31392
|
var META = _metaExports.KEY;
|
|
@@ -31386,7 +31409,7 @@ var _create$1 = _objectCreate;
|
|
|
31386
31409
|
var gOPNExt = _objectGopnExt;
|
|
31387
31410
|
var $GOPD = _objectGopd;
|
|
31388
31411
|
var $GOPS = _objectGops;
|
|
31389
|
-
var $DP =
|
|
31412
|
+
var $DP = require_objectDp();
|
|
31390
31413
|
var $keys$1 = _objectKeys;
|
|
31391
31414
|
var gOPD$4 = $GOPD.f;
|
|
31392
31415
|
var dP = $DP.f;
|
|
@@ -155896,7 +155919,7 @@ class Sequence extends React__default$1.Component {
|
|
|
155896
155919
|
key: i,
|
|
155897
155920
|
...{
|
|
155898
155921
|
...shared,
|
|
155899
|
-
textLength: textLength - fudge - fudge2,
|
|
155922
|
+
textLength: Math.max(0, textLength - fudge - fudge2),
|
|
155900
155923
|
x: x + fudge / 2,
|
|
155901
155924
|
lengthAdjust: "spacing"
|
|
155902
155925
|
}
|
|
@@ -155911,7 +155934,7 @@ class Sequence extends React__default$1.Component {
|
|
|
155911
155934
|
...{
|
|
155912
155935
|
...shared,
|
|
155913
155936
|
x: 0 + fudge / 2,
|
|
155914
|
-
textLength: (alignmentData ? seqReadWidth : width) - fudge - fudge2
|
|
155937
|
+
textLength: Math.max(0, (alignmentData ? seqReadWidth : width) - fudge - fudge2)
|
|
155915
155938
|
}
|
|
155916
155939
|
},
|
|
155917
155940
|
getBoldRegion({ sequence, overlapToBold, rowStart, sequenceLength })
|
|
@@ -157593,7 +157616,7 @@ function getBasesToShow({
|
|
|
157593
157616
|
insertStart
|
|
157594
157617
|
});
|
|
157595
157618
|
}
|
|
157596
|
-
const textLength2 = charWidth * i.bases.length - fudge - fudge2;
|
|
157619
|
+
const textLength2 = Math.max(0, charWidth * i.bases.length - fudge - fudge2);
|
|
157597
157620
|
insertText.push(
|
|
157598
157621
|
/* @__PURE__ */ React__default$1.createElement(
|
|
157599
157622
|
"text",
|
|
@@ -161164,7 +161187,7 @@ function showFileDialog({ multiple = false, onSelect }) {
|
|
|
161164
161187
|
}
|
|
161165
161188
|
|
|
161166
161189
|
const name = "@teselagen/ove";
|
|
161167
|
-
const version = "0.3.
|
|
161190
|
+
const version = "0.3.21";
|
|
161168
161191
|
const main = "./src/index.js";
|
|
161169
161192
|
const exports$1 = {
|
|
161170
161193
|
".": {
|
|
@@ -162632,7 +162655,7 @@ const editCommandDefs = {
|
|
|
162632
162655
|
},
|
|
162633
162656
|
useGtgAndCtgAsStartCodons: {
|
|
162634
162657
|
isHidden: isProtein,
|
|
162635
|
-
name: "Use GTG And CTG As Start Codons",
|
|
162658
|
+
name: (props) => isRna(props) ? "Use GUG And CUG As Start Codons" : "Use GTG And CTG As Start Codons",
|
|
162636
162659
|
isActive: (props) => props.useAdditionalOrfStartCodons,
|
|
162637
162660
|
handler: (props) => props.useAdditionalOrfStartCodonsToggle()
|
|
162638
162661
|
},
|
package/index.umd.js
CHANGED
|
@@ -57113,10 +57113,10 @@
|
|
|
57113
57113
|
};
|
|
57114
57114
|
};
|
|
57115
57115
|
|
|
57116
|
-
var dP$
|
|
57116
|
+
var dP$1 = require_objectDp();
|
|
57117
57117
|
var createDesc$3 = _propertyDesc;
|
|
57118
57118
|
var _hide = require_descriptors() ? function (object, key, value) {
|
|
57119
|
-
return dP$
|
|
57119
|
+
return dP$1.f(object, key, createDesc$3(1, value));
|
|
57120
57120
|
} : function (object, key, value) {
|
|
57121
57121
|
object[key] = value;
|
|
57122
57122
|
return object;
|
|
@@ -57132,7 +57132,7 @@
|
|
|
57132
57132
|
var ctx$1 = _ctx;
|
|
57133
57133
|
var hide$2 = _hide;
|
|
57134
57134
|
var has$d = _has;
|
|
57135
|
-
var PROTOTYPE$
|
|
57135
|
+
var PROTOTYPE$1 = 'prototype';
|
|
57136
57136
|
|
|
57137
57137
|
var $export$8 = function (type, name, source) {
|
|
57138
57138
|
var IS_FORCED = type & $export$8.F;
|
|
@@ -57142,8 +57142,8 @@
|
|
|
57142
57142
|
var IS_BIND = type & $export$8.B;
|
|
57143
57143
|
var IS_WRAP = type & $export$8.W;
|
|
57144
57144
|
var exports = IS_GLOBAL ? core$3 : core$3[name] || (core$3[name] = {});
|
|
57145
|
-
var expProto = exports[PROTOTYPE$
|
|
57146
|
-
var target = IS_GLOBAL ? global$4 : IS_STATIC ? global$4[name] : (global$4[name] || {})[PROTOTYPE$
|
|
57145
|
+
var expProto = exports[PROTOTYPE$1];
|
|
57146
|
+
var target = IS_GLOBAL ? global$4 : IS_STATIC ? global$4[name] : (global$4[name] || {})[PROTOTYPE$1];
|
|
57147
57147
|
var key, own, out;
|
|
57148
57148
|
if (IS_GLOBAL) source = name;
|
|
57149
57149
|
for (key in source) {
|
|
@@ -57167,7 +57167,7 @@
|
|
|
57167
57167
|
} return new C(a, b, c);
|
|
57168
57168
|
} return C.apply(this, arguments);
|
|
57169
57169
|
};
|
|
57170
|
-
F[PROTOTYPE$
|
|
57170
|
+
F[PROTOTYPE$1] = C[PROTOTYPE$1];
|
|
57171
57171
|
return F;
|
|
57172
57172
|
// make static versions for prototype methods
|
|
57173
57173
|
})(out) : IS_PROTO && typeof out == 'function' ? ctx$1(Function.call, out) : out;
|
|
@@ -57304,14 +57304,14 @@
|
|
|
57304
57304
|
var has$c = _has;
|
|
57305
57305
|
var toIObject$4 = _toIobject;
|
|
57306
57306
|
var arrayIndexOf = _arrayIncludes$1(false);
|
|
57307
|
-
var IE_PROTO$
|
|
57307
|
+
var IE_PROTO$1 = _sharedKey('IE_PROTO');
|
|
57308
57308
|
|
|
57309
57309
|
var _objectKeysInternal = function (object, names) {
|
|
57310
57310
|
var O = toIObject$4(object);
|
|
57311
57311
|
var i = 0;
|
|
57312
57312
|
var result = [];
|
|
57313
57313
|
var key;
|
|
57314
|
-
for (key in O) if (key != IE_PROTO$
|
|
57314
|
+
for (key in O) if (key != IE_PROTO$1) has$c(O, key) && result.push(key);
|
|
57315
57315
|
// Don't enum bug & hidden keys
|
|
57316
57316
|
while (names.length > i) if (has$c(O, key = names[i++])) {
|
|
57317
57317
|
~arrayIndexOf(result, key) || result.push(key);
|
|
@@ -57326,10 +57326,10 @@
|
|
|
57326
57326
|
|
|
57327
57327
|
// 19.1.2.14 / 15.2.3.14 Object.keys(O)
|
|
57328
57328
|
var $keys$3 = _objectKeysInternal;
|
|
57329
|
-
var enumBugKeys
|
|
57329
|
+
var enumBugKeys = _enumBugKeys;
|
|
57330
57330
|
|
|
57331
57331
|
var _objectKeys = Object.keys || function keys(O) {
|
|
57332
|
-
return $keys$3(O, enumBugKeys
|
|
57332
|
+
return $keys$3(O, enumBugKeys);
|
|
57333
57333
|
};
|
|
57334
57334
|
|
|
57335
57335
|
var _objectGops = {};
|
|
@@ -57436,19 +57436,27 @@
|
|
|
57436
57436
|
|
|
57437
57437
|
var _redefine = _hide;
|
|
57438
57438
|
|
|
57439
|
-
var
|
|
57440
|
-
var
|
|
57441
|
-
var getKeys$1 = _objectKeys;
|
|
57439
|
+
var _objectDps;
|
|
57440
|
+
var hasRequired_objectDps;
|
|
57442
57441
|
|
|
57443
|
-
|
|
57444
|
-
|
|
57445
|
-
|
|
57446
|
-
|
|
57447
|
-
|
|
57448
|
-
|
|
57449
|
-
|
|
57450
|
-
|
|
57451
|
-
|
|
57442
|
+
function require_objectDps () {
|
|
57443
|
+
if (hasRequired_objectDps) return _objectDps;
|
|
57444
|
+
hasRequired_objectDps = 1;
|
|
57445
|
+
var dP = require_objectDp();
|
|
57446
|
+
var anObject = _anObject;
|
|
57447
|
+
var getKeys = _objectKeys;
|
|
57448
|
+
|
|
57449
|
+
_objectDps = require_descriptors() ? Object.defineProperties : function defineProperties(O, Properties) {
|
|
57450
|
+
anObject(O);
|
|
57451
|
+
var keys = getKeys(Properties);
|
|
57452
|
+
var length = keys.length;
|
|
57453
|
+
var i = 0;
|
|
57454
|
+
var P;
|
|
57455
|
+
while (length > i) dP.f(O, P = keys[i++], Properties[P]);
|
|
57456
|
+
return O;
|
|
57457
|
+
};
|
|
57458
|
+
return _objectDps;
|
|
57459
|
+
}
|
|
57452
57460
|
|
|
57453
57461
|
var _html;
|
|
57454
57462
|
var hasRequired_html;
|
|
@@ -57461,47 +57469,55 @@
|
|
|
57461
57469
|
return _html;
|
|
57462
57470
|
}
|
|
57463
57471
|
|
|
57464
|
-
|
|
57465
|
-
var
|
|
57466
|
-
var dPs = _objectDps;
|
|
57467
|
-
var enumBugKeys = _enumBugKeys;
|
|
57468
|
-
var IE_PROTO$1 = _sharedKey('IE_PROTO');
|
|
57469
|
-
var Empty = function () { /* empty */ };
|
|
57470
|
-
var PROTOTYPE$1 = 'prototype';
|
|
57472
|
+
var _objectCreate;
|
|
57473
|
+
var hasRequired_objectCreate;
|
|
57471
57474
|
|
|
57472
|
-
|
|
57473
|
-
|
|
57474
|
-
|
|
57475
|
-
|
|
57476
|
-
|
|
57477
|
-
|
|
57478
|
-
|
|
57479
|
-
|
|
57480
|
-
|
|
57481
|
-
|
|
57482
|
-
|
|
57483
|
-
|
|
57484
|
-
|
|
57485
|
-
|
|
57486
|
-
|
|
57487
|
-
|
|
57488
|
-
|
|
57489
|
-
|
|
57490
|
-
|
|
57491
|
-
|
|
57492
|
-
|
|
57493
|
-
|
|
57494
|
-
|
|
57495
|
-
|
|
57496
|
-
|
|
57497
|
-
|
|
57498
|
-
|
|
57499
|
-
|
|
57500
|
-
|
|
57501
|
-
|
|
57502
|
-
|
|
57503
|
-
|
|
57504
|
-
|
|
57475
|
+
function require_objectCreate () {
|
|
57476
|
+
if (hasRequired_objectCreate) return _objectCreate;
|
|
57477
|
+
hasRequired_objectCreate = 1;
|
|
57478
|
+
// 19.1.2.2 / 15.2.3.5 Object.create(O [, Properties])
|
|
57479
|
+
var anObject = _anObject;
|
|
57480
|
+
var dPs = require_objectDps();
|
|
57481
|
+
var enumBugKeys = _enumBugKeys;
|
|
57482
|
+
var IE_PROTO = _sharedKey('IE_PROTO');
|
|
57483
|
+
var Empty = function () { /* empty */ };
|
|
57484
|
+
var PROTOTYPE = 'prototype';
|
|
57485
|
+
|
|
57486
|
+
// Create object with fake `null` prototype: use iframe Object with cleared prototype
|
|
57487
|
+
var createDict = function () {
|
|
57488
|
+
// Thrash, waste and sodomy: IE GC bug
|
|
57489
|
+
var iframe = require_domCreate()('iframe');
|
|
57490
|
+
var i = enumBugKeys.length;
|
|
57491
|
+
var lt = '<';
|
|
57492
|
+
var gt = '>';
|
|
57493
|
+
var iframeDocument;
|
|
57494
|
+
iframe.style.display = 'none';
|
|
57495
|
+
require_html().appendChild(iframe);
|
|
57496
|
+
iframe.src = 'javascript:'; // eslint-disable-line no-script-url
|
|
57497
|
+
// createDict = iframe.contentWindow.Object;
|
|
57498
|
+
// html.removeChild(iframe);
|
|
57499
|
+
iframeDocument = iframe.contentWindow.document;
|
|
57500
|
+
iframeDocument.open();
|
|
57501
|
+
iframeDocument.write(lt + 'script' + gt + 'document.F=Object' + lt + '/script' + gt);
|
|
57502
|
+
iframeDocument.close();
|
|
57503
|
+
createDict = iframeDocument.F;
|
|
57504
|
+
while (i--) delete createDict[PROTOTYPE][enumBugKeys[i]];
|
|
57505
|
+
return createDict();
|
|
57506
|
+
};
|
|
57507
|
+
|
|
57508
|
+
_objectCreate = Object.create || function create(O, Properties) {
|
|
57509
|
+
var result;
|
|
57510
|
+
if (O !== null) {
|
|
57511
|
+
Empty[PROTOTYPE] = anObject(O);
|
|
57512
|
+
result = new Empty();
|
|
57513
|
+
Empty[PROTOTYPE] = null;
|
|
57514
|
+
// add "__proto__" for Object.getPrototypeOf polyfill
|
|
57515
|
+
result[IE_PROTO] = O;
|
|
57516
|
+
} else result = createDict();
|
|
57517
|
+
return Properties === undefined ? result : dPs(result, Properties);
|
|
57518
|
+
};
|
|
57519
|
+
return _objectCreate;
|
|
57520
|
+
}
|
|
57505
57521
|
|
|
57506
57522
|
var _wks = {exports: {}};
|
|
57507
57523
|
|
|
@@ -57527,7 +57543,7 @@
|
|
|
57527
57543
|
if (it && !has$b(it = stat ? it : it.prototype, TAG$1)) def(it, TAG$1, { configurable: true, value: tag });
|
|
57528
57544
|
};
|
|
57529
57545
|
|
|
57530
|
-
var create$4 =
|
|
57546
|
+
var create$4 = require_objectCreate();
|
|
57531
57547
|
var descriptor = _propertyDesc;
|
|
57532
57548
|
var setToStringTag$2 = _setToStringTag;
|
|
57533
57549
|
var IteratorPrototype = {};
|
|
@@ -58170,7 +58186,7 @@
|
|
|
58170
58186
|
var toIObject = _toIobject;
|
|
58171
58187
|
var toPrimitive = _toPrimitive$1;
|
|
58172
58188
|
var createDesc = _propertyDesc;
|
|
58173
|
-
var _create$1 =
|
|
58189
|
+
var _create$1 = require_objectCreate();
|
|
58174
58190
|
var gOPNExt = _objectGopnExt;
|
|
58175
58191
|
var $GOPD = _objectGopd;
|
|
58176
58192
|
var $GOPS = _objectGops;
|
|
@@ -58480,7 +58496,7 @@
|
|
|
58480
58496
|
|
|
58481
58497
|
var $export = _export;
|
|
58482
58498
|
// 19.1.2.2 / 15.2.3.5 Object.create(O [, Properties])
|
|
58483
|
-
$export($export.S, 'Object', { create:
|
|
58499
|
+
$export($export.S, 'Object', { create: require_objectCreate() });
|
|
58484
58500
|
|
|
58485
58501
|
var $Object = _coreExports.Object;
|
|
58486
58502
|
var create$3 = function create(P, D) {
|
|
@@ -183562,7 +183578,7 @@
|
|
|
183562
183578
|
key: i,
|
|
183563
183579
|
...{
|
|
183564
183580
|
...shared,
|
|
183565
|
-
textLength: textLength - fudge - fudge2,
|
|
183581
|
+
textLength: Math.max(0, textLength - fudge - fudge2),
|
|
183566
183582
|
x: x + fudge / 2,
|
|
183567
183583
|
lengthAdjust: "spacing"
|
|
183568
183584
|
}
|
|
@@ -183577,7 +183593,7 @@
|
|
|
183577
183593
|
...{
|
|
183578
183594
|
...shared,
|
|
183579
183595
|
x: 0 + fudge / 2,
|
|
183580
|
-
textLength: (alignmentData ? seqReadWidth : width) - fudge - fudge2
|
|
183596
|
+
textLength: Math.max(0, (alignmentData ? seqReadWidth : width) - fudge - fudge2)
|
|
183581
183597
|
}
|
|
183582
183598
|
},
|
|
183583
183599
|
getBoldRegion({ sequence, overlapToBold, rowStart, sequenceLength })
|
|
@@ -185259,7 +185275,7 @@ double click --> edit`}`;
|
|
|
185259
185275
|
insertStart
|
|
185260
185276
|
});
|
|
185261
185277
|
}
|
|
185262
|
-
const textLength2 = charWidth * i.bases.length - fudge - fudge2;
|
|
185278
|
+
const textLength2 = Math.max(0, charWidth * i.bases.length - fudge - fudge2);
|
|
185263
185279
|
insertText.push(
|
|
185264
185280
|
/* @__PURE__ */ React$3.createElement(
|
|
185265
185281
|
"text",
|
|
@@ -188792,7 +188808,7 @@ double click --> edit`}`;
|
|
|
188792
188808
|
}
|
|
188793
188809
|
|
|
188794
188810
|
const name = "@teselagen/ove";
|
|
188795
|
-
const version = "0.3.
|
|
188811
|
+
const version = "0.3.21";
|
|
188796
188812
|
const main = "./src/index.js";
|
|
188797
188813
|
const exports$1 = {
|
|
188798
188814
|
".": {
|
|
@@ -190260,7 +190276,7 @@ double click --> edit`}`;
|
|
|
190260
190276
|
},
|
|
190261
190277
|
useGtgAndCtgAsStartCodons: {
|
|
190262
190278
|
isHidden: isProtein,
|
|
190263
|
-
name: "Use GTG And CTG As Start Codons",
|
|
190279
|
+
name: (props) => isRna(props) ? "Use GUG And CUG As Start Codons" : "Use GTG And CTG As Start Codons",
|
|
190264
190280
|
isActive: (props) => props.useAdditionalOrfStartCodons,
|
|
190265
190281
|
handler: (props) => props.useAdditionalOrfStartCodonsToggle()
|
|
190266
190282
|
},
|
package/package.json
CHANGED
package/src/RowItem/Sequence.js
CHANGED
|
@@ -111,7 +111,7 @@ class Sequence extends React.Component {
|
|
|
111
111
|
key={i}
|
|
112
112
|
{...{
|
|
113
113
|
...shared,
|
|
114
|
-
textLength: textLength - fudge - fudge2,
|
|
114
|
+
textLength: Math.max(0,textLength - fudge - fudge2),
|
|
115
115
|
x: x + fudge / 2,
|
|
116
116
|
lengthAdjust: "spacing"
|
|
117
117
|
}}
|
|
@@ -126,7 +126,7 @@ class Sequence extends React.Component {
|
|
|
126
126
|
{...{
|
|
127
127
|
...shared,
|
|
128
128
|
x: 0 + fudge / 2,
|
|
129
|
-
textLength: (alignmentData ? seqReadWidth : width) - fudge - fudge2
|
|
129
|
+
textLength: Math.max(0,(alignmentData ? seqReadWidth : width) - fudge - fudge2)
|
|
130
130
|
}}
|
|
131
131
|
>
|
|
132
132
|
{getBoldRegion({ sequence, overlapToBold, rowStart, sequenceLength })}
|
|
@@ -106,7 +106,7 @@ export function getBasesToShow({
|
|
|
106
106
|
insertStart
|
|
107
107
|
});
|
|
108
108
|
}
|
|
109
|
-
const textLength = charWidth * i.bases.length - fudge - fudge2;
|
|
109
|
+
const textLength = Math.max(0,charWidth * i.bases.length - fudge - fudge2);
|
|
110
110
|
insertText.push(
|
|
111
111
|
<text
|
|
112
112
|
style={{ pointerEvents: "none" }}
|
package/src/commands/index.js
CHANGED
|
@@ -930,7 +930,10 @@ const editCommandDefs = {
|
|
|
930
930
|
useGtgAndCtgAsStartCodons: {
|
|
931
931
|
isHidden: isProtein,
|
|
932
932
|
|
|
933
|
-
name:
|
|
933
|
+
name: props =>
|
|
934
|
+
isRna(props)
|
|
935
|
+
? "Use GUG And CUG As Start Codons"
|
|
936
|
+
: "Use GTG And CTG As Start Codons",
|
|
934
937
|
isActive: props => props.useAdditionalOrfStartCodons,
|
|
935
938
|
handler: props => props.useAdditionalOrfStartCodonsToggle()
|
|
936
939
|
},
|