@teselagen/ove 0.3.11 → 0.3.12

package/src/SimpleCircularOrLinearView.js

@@ -31,7 +31,7 @@ import {
 } from "./withEditorInteractions/clickAndDragUtils";
 
 //this view is meant to be a helper for showing a simple (non-redux connected) circular or linear view!
-export default (props) => {
+export default props => {
   let {
     sequenceData: _sequenceData,
     annotationVisibility: _annotationVisibility = {},
@@ -281,13 +281,13 @@ export default (props) => {
   return inner({});
 };
 
-const DownloadBtn = withHandlers({ exportSequenceToFile })((props) => {
+const DownloadBtn = withHandlers({ exportSequenceToFile })(props => {
   return (
     <Tooltip content="Download">
       <Button
         className="veDownloadButton"
         style={{ marginRight: 10 }}
-        onClick={(event) =>
+        onClick={event =>
           showContextMenu(
             [
               "exportSequenceAsGenbank",
@@ -337,7 +337,7 @@ const VisibilityOptions = ({
     <Tooltip disabled={isPopoverOpen} content="Visibility Options">
       <Popover
         minimal
-        onInteraction={(isOpen) => {
+        onInteraction={isOpen => {
           setPopoverOpen(isOpen);
         }}
         isOpen={isPopoverOpen}
@@ -345,11 +345,11 @@ const VisibilityOptions = ({
           <Menu>
             {flatMap(
               ["features", "parts", "primers", "translations", "cutsites"],
-              (name) => {
+              name => {
                 if (!map(sequenceData[name]).length) return [];
                 return (
                   <MenuItem
-                    onClick={(e) => {
+                    onClick={e => {
                       setVisibilityOptions({
                         ...annotationVisibility,
                         [name]: !annotationVisibility[name]

package/src/StatusBar/MeltingTemp.js

@@ -9,8 +9,8 @@ import useTmType from "../utils/useTmType";
 
 export default function MeltingTemp({
   sequence,
-  WrapperToUse = (p) => <div>{p.children}</div>,
-  InnerWrapper = (p) => (
+  WrapperToUse = p => <div>{p.children}</div>,
+  InnerWrapper = p => (
     <Button minimal small>
       {p.children}
     </Button>
@@ -46,7 +46,7 @@ export default function MeltingTemp({
                 { value: "default", label: "Default Tm" },
                 { value: "neb_tm", label: "NEB Tm" }
               ]}
-              onChange={(e) => setTmType(e.target.value)}
+              onChange={e => setTmType(e.target.value)}
               selectedValue={tmType}
             ></RadioGroup>
             {hasWarning && (

package/src/ToolBar/ToolbarItem.js

@@ -125,7 +125,7 @@ class ToolbarItem extends React.Component {
     );
     const content = (
       <div
-        ref={(n) => {
+        ref={n => {
           if (n) this.dropdownNode = n;
         }}
         style={{ padding: 10, minWidth: 250, maxWidth: 350 }}
@@ -160,7 +160,7 @@ class ToolbarItem extends React.Component {
         <Popover
           disabled={popoverDisabled}
           isOpen={!!Dropdown && isOpen}
-          onClose={(e) => {
+          onClose={e => {
             let srcElement;
             if (e) {
               srcElement = e.srcElement || e.target;

package/src/ToolBar/alignmentTool.js

@@ -100,7 +100,7 @@ class AlignmentTool extends React.Component {
   state = {
     templateSeqIndex: 0
   };
-  sendSelectedDataToBackendForAlignment = async (values) => {
+  sendSelectedDataToBackendForAlignment = async values => {
     const {
       addedSequences,
       isPairwiseAlignment,
@@ -175,7 +175,7 @@ class AlignmentTool extends React.Component {
     // const j5server = process.env.REMOTE_J5 || "http://j5server.teselagen.com"
 
     window.toastr.success("Alignment submitted.");
-    const replaceProtocol = (url) => {
+    const replaceProtocol = url => {
       return url.replace("http://", window.location.protocol + "//");
     };
 
@@ -227,7 +227,7 @@ class AlignmentTool extends React.Component {
         }),
       alignmentTracks:
         alignedSequences &&
-        alignedSequences.map((alignmentData) => {
+        alignedSequences.map(alignmentData => {
           return {
             sequenceData:
               seqsToAlign[
@@ -254,12 +254,12 @@ class AlignmentTool extends React.Component {
 
   handleFileUpload = (files, onChange) => {
     const { array } = this.props;
-    flatMap(files, async (file) => {
+    flatMap(files, async file => {
       const results = await anyToJson(file.originalFileObj, {
         fileName: file.name,
         acceptParts: true
       });
-      return results.forEach((result) => {
+      return results.forEach(result => {
         if (result.success) {
           array.push("addedSequences", result.parsedSequence);
         } else {
@@ -278,7 +278,7 @@ class AlignmentTool extends React.Component {
         <h6>Or enter sequences in plain text format</h6>
         <div>
           <AddYourOwnSeqForm
-            addSeq={(newSeq) => {
+            addSeq={newSeq => {
               fields.push(newSeq);
             }}
           />
@@ -327,7 +327,7 @@ class AlignmentTool extends React.Component {
                   )}
 
                   <Button
-                    onClick={(e) => {
+                    onClick={e => {
                       e.stopPropagation();
                       e.preventDefault();
                       fields.remove(index);
@@ -443,7 +443,7 @@ const AddYourOwnSeqForm = reduxForm({
 })(({ pristine, error, handleSubmit, reset, addSeq }) => {
   return (
     <form
-      onSubmit={handleSubmit((vals) => {
+      onSubmit={handleSubmit(vals => {
         reset();
         addSeq(vals);
       })}
@@ -490,7 +490,7 @@ function mottTrim(qualNums) {
       totalScore = 0;
     }
   }
-  const firstPositiveValue = totalScoreInfo.find((e) => {
+  const firstPositiveValue = totalScoreInfo.find(e => {
     return e > 0;
   });
   startPos = totalScoreInfo.indexOf(firstPositiveValue);

package/src/ToolBar/editTool.js

@@ -3,7 +3,7 @@ import { Icon } from "@blueprintjs/core";
 import ToolbarItem from "./ToolbarItem";
 import { connectToEditor } from "../withEditorProps";
 
-export default connectToEditor((editorState) => {
+export default connectToEditor(editorState => {
   return {
     readOnly: editorState.readOnly
   };

package/src/ToolBar/findTool.js

@@ -1,2 +1,2 @@
-import inlineFindTool from './inlineFindTool'
-export default inlineFindTool
+import inlineFindTool from "./inlineFindTool";
+export default inlineFindTool;

package/src/ToolBar/importTool.js

@@ -17,7 +17,7 @@ export default compose(
         IconWrapperProps: {
           multiple: false,
           style: {},
-          onDrop: (files) => importSequenceFromFile(files[0])
+          onDrop: files => importSequenceFromFile(files[0])
         },
         tooltip: "Click or drag to import and view files (.fasta .gb .dna)",
         ...toolbarItemProps

package/src/ToolBar/index.js

@@ -66,7 +66,7 @@ export function ToolBar(props) {
   };
 
   const toolListToUse = useMemo(() => {
-    return flatMap(toolList, (toolNameOrOverrides) => {
+    return flatMap(toolList, toolNameOrOverrides => {
       let toolName;
       let toolOverride;
       if (isString(toolNameOrOverrides)) {
@@ -196,7 +196,7 @@ export function ToolBar(props) {
     </div>
   );
 }
-const CloseFullscreenButton = (props) => {
+const CloseFullscreenButton = props => {
   return (
     <Tooltip content="Close Fullscreen Mode">
       <Button

package/src/ToolBar/oligoTool.js

@@ -16,7 +16,7 @@ export default connectToEditor(editorState => {
     <ToolbarItem
       {...{
         Icon: <Icon icon="swap-horizontal" />,
-        onIconClick: function() {
+        onIconClick: function () {
           annotationVisibilityToggle("primers");
         },
         isHidden,

package/src/ToolBar/orfTool.js

@@ -1,11 +1,6 @@
 import { Icon } from "@blueprintjs/core";
 import React from "react";
-import {
-  orfIcon,
-  CmdCheckbox,
-  CmdDiv,
-  InfoHelper
-} from "@teselagen/ui";
+import { orfIcon, CmdCheckbox, CmdDiv, InfoHelper } from "@teselagen/ui";
 import ToolbarItem from "./ToolbarItem";
 import { connectToEditor } from "../withEditorProps";
 import withEditorProps from "../withEditorProps";

package/src/ToolBar/printTool.js

@@ -1,11 +1,11 @@
-//TNRTODO this needs to be fixed and implemented 
+//TNRTODO this needs to be fixed and implemented
 import React from "react";
 import print from "./veToolbarIcons/print.png";
 
 export default () => {
   return {
     Icon: <img src={print} alt="Print Vector" />,
-    onIconClick: function() {
+    onIconClick: function () {
       // var myPrintContent = document.getElementById('printdiv');
       // var myPrintWindow = window.open(windowUrl, windowName, 'left=300,top=100,width=400,height=400');
       // myPrintWindow.document.write(myPrintContent.innerHTML);

package/src/ToolBar/visibilityTool.js

@@ -27,7 +27,7 @@ export default connectToEditor(({ toolBar = {} }) => {
   );
 });
 
-const VisibilityOptions = withEditorProps(function(props) {
+const VisibilityOptions = withEditorProps(function (props) {
   return (
     <Menu>
       {createCommandMenu(viewSubmenu, getCommands({ props }), {

package/src/VersionHistoryView/index.js

@@ -38,7 +38,7 @@ export class VersionHistoryView extends React.Component {
   //     ];
   //   }
   // };
-  updateSeqData = (sequenceData) => {
+  updateSeqData = sequenceData => {
     this.activeSeqData = sequenceData;
     this.props.vectorEditorInitialize(
       {
@@ -81,7 +81,7 @@ export class VersionHistoryView extends React.Component {
     this.setState({
       versionList: [
         currentVersion,
-        ...versionList.map((r) => {
+        ...versionList.map(r => {
           return { ...r, id: r.versionId };
         })
       ] //currentVersion should always come first