@teselagen/ove 0.3.10 → 0.3.11

package/index.js

@@ -30317,17 +30317,17 @@ var _toPrimitive$1 = function (it, S) {
   throw TypeError("Can't convert object to primitive value");
 };
 
-var anObject$3 = _anObject;
+var anObject$5 = _anObject;
 var IE8_DOM_DEFINE$1 = _ie8DomDefine;
 var toPrimitive$2 = _toPrimitive$1;
-var dP$2 = Object.defineProperty;
+var dP$3 = Object.defineProperty;
 
 _objectDp.f = _descriptors ? Object.defineProperty : function defineProperty(O, P, Attributes) {
-  anObject$3(O);
+  anObject$5(O);
   P = toPrimitive$2(P, true);
-  anObject$3(Attributes);
+  anObject$5(Attributes);
   if (IE8_DOM_DEFINE$1) try {
-    return dP$2(O, P, Attributes);
+    return dP$3(O, P, Attributes);
   } catch (e) { /* empty */ }
   if ('get' in Attributes || 'set' in Attributes) throw TypeError('Accessors not supported!');
   if ('value' in Attributes) O[P] = Attributes.value;
@@ -30343,10 +30343,10 @@ var _propertyDesc = function (bitmap, value) {
   };
 };
 
-var dP$1 = _objectDp;
+var dP$2 = _objectDp;
 var createDesc$3 = _propertyDesc;
 var _hide = _descriptors ? function (object, key, value) {
-  return dP$1.f(object, key, createDesc$3(1, value));
+  return dP$2.f(object, key, createDesc$3(1, value));
 } : function (object, key, value) {
   object[key] = value;
   return object;
@@ -30362,7 +30362,7 @@ var core$3 = _coreExports;
 var ctx$1 = _ctx;
 var hide$3 = _hide;
 var has$e = _has;
-var PROTOTYPE$1 = 'prototype';
+var PROTOTYPE$2 = 'prototype';
 
 var $export$8 = function (type, name, source) {
   var IS_FORCED = type & $export$8.F;
@@ -30372,8 +30372,8 @@ var $export$8 = function (type, name, source) {
   var IS_BIND = type & $export$8.B;
   var IS_WRAP = type & $export$8.W;
   var exports = IS_GLOBAL ? core$3 : core$3[name] || (core$3[name] = {});
-  var expProto = exports[PROTOTYPE$1];
-  var target = IS_GLOBAL ? global$5 : IS_STATIC ? global$5[name] : (global$5[name] || {})[PROTOTYPE$1];
+  var expProto = exports[PROTOTYPE$2];
+  var target = IS_GLOBAL ? global$5 : IS_STATIC ? global$5[name] : (global$5[name] || {})[PROTOTYPE$2];
   var key, own, out;
   if (IS_GLOBAL) source = name;
   for (key in source) {
@@ -30397,7 +30397,7 @@ var $export$8 = function (type, name, source) {
           } return new C(a, b, c);
         } return C.apply(this, arguments);
       };
-      F[PROTOTYPE$1] = C[PROTOTYPE$1];
+      F[PROTOTYPE$2] = C[PROTOTYPE$2];
       return F;
     // make static versions for prototype methods
     })(out) : IS_PROTO && typeof out == 'function' ? ctx$1(Function.call, out) : out;
@@ -30534,14 +30534,14 @@ var _sharedKey = function (key) {
 var has$d = _has;
 var toIObject$4 = _toIobject;
 var arrayIndexOf = _arrayIncludes$1(false);
-var IE_PROTO$1 = _sharedKey('IE_PROTO');
+var IE_PROTO$2 = _sharedKey('IE_PROTO');
 
 var _objectKeysInternal = function (object, names) {
   var O = toIObject$4(object);
   var i = 0;
   var result = [];
   var key;
-  for (key in O) if (key != IE_PROTO$1) has$d(O, key) && result.push(key);
+  for (key in O) if (key != IE_PROTO$2) has$d(O, key) && result.push(key);
   // Don't enum bug & hidden keys
   while (names.length > i) if (has$d(O, key = names[i++])) {
     ~arrayIndexOf(result, key) || result.push(key);
@@ -30555,11 +30555,11 @@ var _enumBugKeys = (
 ).split(',');
 
 // 19.1.2.14 / 15.2.3.14 Object.keys(O)
-var $keys$2 = _objectKeysInternal;
-var enumBugKeys = _enumBugKeys;
+var $keys$3 = _objectKeysInternal;
+var enumBugKeys$1 = _enumBugKeys;
 
 var _objectKeys = Object.keys || function keys(O) {
-  return $keys$2(O, enumBugKeys);
+  return $keys$3(O, enumBugKeys$1);
 };
 
 var _objectGops = {};
@@ -30666,27 +30666,19 @@ var _iterators = {};
 
 var _redefine = _hide;
 
-var _objectDps;
-var hasRequired_objectDps;
-
-function require_objectDps () {
-	if (hasRequired_objectDps) return _objectDps;
-	hasRequired_objectDps = 1;
-	var dP = _objectDp;
-	var anObject = _anObject;
-	var getKeys = _objectKeys;
+var dP$1 = _objectDp;
+var anObject$4 = _anObject;
+var getKeys$1 = _objectKeys;
 
-	_objectDps = _descriptors ? Object.defineProperties : function defineProperties(O, Properties) {
-	  anObject(O);
-	  var keys = getKeys(Properties);
-	  var length = keys.length;
-	  var i = 0;
-	  var P;
-	  while (length > i) dP.f(O, P = keys[i++], Properties[P]);
-	  return O;
-	};
-	return _objectDps;
-}
+var _objectDps = _descriptors ? Object.defineProperties : function defineProperties(O, Properties) {
+  anObject$4(O);
+  var keys = getKeys$1(Properties);
+  var length = keys.length;
+  var i = 0;
+  var P;
+  while (length > i) dP$1.f(O, P = keys[i++], Properties[P]);
+  return O;
+};
 
 var _html;
 var hasRequired_html;
@@ -30699,55 +30691,47 @@ function require_html () {
 	return _html;
 }
 
-var _objectCreate;
-var hasRequired_objectCreate;
+// 19.1.2.2 / 15.2.3.5 Object.create(O [, Properties])
+var anObject$3 = _anObject;
+var dPs = _objectDps;
+var enumBugKeys = _enumBugKeys;
+var IE_PROTO$1 = _sharedKey('IE_PROTO');
+var Empty = function () { /* empty */ };
+var PROTOTYPE$1 = 'prototype';
 
-function require_objectCreate () {
-	if (hasRequired_objectCreate) return _objectCreate;
-	hasRequired_objectCreate = 1;
-	// 19.1.2.2 / 15.2.3.5 Object.create(O [, Properties])
-	var anObject = _anObject;
-	var dPs = require_objectDps();
-	var enumBugKeys = _enumBugKeys;
-	var IE_PROTO = _sharedKey('IE_PROTO');
-	var Empty = function () { /* empty */ };
-	var PROTOTYPE = 'prototype';
-
-	// Create object with fake `null` prototype: use iframe Object with cleared prototype
-	var createDict = function () {
-	  // Thrash, waste and sodomy: IE GC bug
-	  var iframe = require_domCreate()('iframe');
-	  var i = enumBugKeys.length;
-	  var lt = '<';
-	  var gt = '>';
-	  var iframeDocument;
-	  iframe.style.display = 'none';
-	  require_html().appendChild(iframe);
-	  iframe.src = 'javascript:'; // eslint-disable-line no-script-url
-	  // createDict = iframe.contentWindow.Object;
-	  // html.removeChild(iframe);
-	  iframeDocument = iframe.contentWindow.document;
-	  iframeDocument.open();
-	  iframeDocument.write(lt + 'script' + gt + 'document.F=Object' + lt + '/script' + gt);
-	  iframeDocument.close();
-	  createDict = iframeDocument.F;
-	  while (i--) delete createDict[PROTOTYPE][enumBugKeys[i]];
-	  return createDict();
-	};
-
-	_objectCreate = Object.create || function create(O, Properties) {
-	  var result;
-	  if (O !== null) {
-	    Empty[PROTOTYPE] = anObject(O);
-	    result = new Empty();
-	    Empty[PROTOTYPE] = null;
-	    // add "__proto__" for Object.getPrototypeOf polyfill
-	    result[IE_PROTO] = O;
-	  } else result = createDict();
-	  return Properties === undefined ? result : dPs(result, Properties);
-	};
-	return _objectCreate;
-}
+// Create object with fake `null` prototype: use iframe Object with cleared prototype
+var createDict = function () {
+  // Thrash, waste and sodomy: IE GC bug
+  var iframe = require_domCreate()('iframe');
+  var i = enumBugKeys.length;
+  var lt = '<';
+  var gt = '>';
+  var iframeDocument;
+  iframe.style.display = 'none';
+  require_html().appendChild(iframe);
+  iframe.src = 'javascript:'; // eslint-disable-line no-script-url
+  // createDict = iframe.contentWindow.Object;
+  // html.removeChild(iframe);
+  iframeDocument = iframe.contentWindow.document;
+  iframeDocument.open();
+  iframeDocument.write(lt + 'script' + gt + 'document.F=Object' + lt + '/script' + gt);
+  iframeDocument.close();
+  createDict = iframeDocument.F;
+  while (i--) delete createDict[PROTOTYPE$1][enumBugKeys[i]];
+  return createDict();
+};
+
+var _objectCreate = Object.create || function create(O, Properties) {
+  var result;
+  if (O !== null) {
+    Empty[PROTOTYPE$1] = anObject$3(O);
+    result = new Empty();
+    Empty[PROTOTYPE$1] = null;
+    // add "__proto__" for Object.getPrototypeOf polyfill
+    result[IE_PROTO$1] = O;
+  } else result = createDict();
+  return Properties === undefined ? result : dPs(result, Properties);
+};
 
 var _wks = {exports: {}};
 
@@ -30773,7 +30757,7 @@ var _setToStringTag = function (it, tag, stat) {
   if (it && !has$c(it = stat ? it : it.prototype, TAG$1)) def(it, TAG$1, { configurable: true, value: tag });
 };
 
-var create$4 = require_objectCreate();
+var create$4 = _objectCreate;
 var descriptor = _propertyDesc;
 var setToStringTag$2 = _setToStringTag;
 var IteratorPrototype = {};
@@ -31347,24 +31331,17 @@ var _objectGopnExt = {};
 
 var _objectGopn = {};
 
-var hasRequired_objectGopn;
-
-function require_objectGopn () {
-	if (hasRequired_objectGopn) return _objectGopn;
-	hasRequired_objectGopn = 1;
-	// 19.1.2.7 / 15.2.3.4 Object.getOwnPropertyNames(O)
-	var $keys = _objectKeysInternal;
-	var hiddenKeys = _enumBugKeys.concat('length', 'prototype');
+// 19.1.2.7 / 15.2.3.4 Object.getOwnPropertyNames(O)
+var $keys$2 = _objectKeysInternal;
+var hiddenKeys = _enumBugKeys.concat('length', 'prototype');
 
-	_objectGopn.f = Object.getOwnPropertyNames || function getOwnPropertyNames(O) {
-	  return $keys(O, hiddenKeys);
-	};
-	return _objectGopn;
-}
+_objectGopn.f = Object.getOwnPropertyNames || function getOwnPropertyNames(O) {
+  return $keys$2(O, hiddenKeys);
+};
 
 // fallback for IE11 buggy Object.getOwnPropertyNames with iframe and window
 var toIObject$2 = _toIobject;
-var gOPN$1 = require_objectGopn().f;
+var gOPN$1 = _objectGopn.f;
 var toString$5 = {}.toString;
 
 var windowNames = typeof window == 'object' && window && Object.getOwnPropertyNames
@@ -31423,7 +31400,7 @@ var toObject$1 = _toObject;
 var toIObject = _toIobject;
 var toPrimitive = _toPrimitive$1;
 var createDesc = _propertyDesc;
-var _create$1 = require_objectCreate();
+var _create$1 = _objectCreate;
 var gOPNExt = _objectGopnExt;
 var $GOPD = _objectGopd;
 var $GOPS = _objectGops;
@@ -31551,7 +31528,7 @@ if (!USE_NATIVE) {
 
   $GOPD.f = $getOwnPropertyDescriptor;
   $DP.f = $defineProperty$1;
-  require_objectGopn().f = gOPNExt.f = $getOwnPropertyNames;
+  _objectGopn.f = gOPNExt.f = $getOwnPropertyNames;
   require_objectPie().f = $propertyIsEnumerable;
   $GOPS.f = $getOwnPropertySymbols;
 
@@ -31733,7 +31710,7 @@ var setPrototypeOf = { "default": setPrototypeOf$1, __esModule: true };
 
 var $export = _export;
 // 19.1.2.2 / 15.2.3.5 Object.create(O [, Properties])
-$export($export.S, 'Object', { create: require_objectCreate() });
+$export($export.S, 'Object', { create: _objectCreate });
 
 var $Object$1 = _coreExports.Object;
 var create$3 = function create(P, D) {
@@ -123007,6 +122984,19 @@ function createInitialSequence(options) {
   };
 }
 
+function extractFileExtension(name) {
+  if (typeof name === "string") {
+    let ext = "";
+    const match = name.match(/\.(\w+)$/);
+    if (match && match[1]) {
+      ext = match[1];
+    }
+    return ext;
+  } else {
+    return "";
+  }
+}
+
 function splitStringIntoLines(string) {
   let lines = [];
   if (string === "") {
@@ -123580,7 +123570,11 @@ function validateSequenceArray(parsingResultArray, options) {
   return parsingResultArray;
 }
 
-function fastaToJson(fileString, options) {
+function fastaToJson(fileString, options = {}) {
+  const ext = extractFileExtension(options.fileName);
+  if (/^(faa)$/.test(ext)) {
+    options.isProtein = true;
+  }
   let resultArray = [];
   let result = null;
   try {
@@ -126052,19 +126046,6 @@ function parseSbolJson(sbolJson, options) {
   };
 }
 
-function extractFileExtension(name) {
-  if (typeof name === "string") {
-    let ext = "";
-    const match = name.match(/\.(\w+)$/);
-    if (match && match[1]) {
-      ext = match[1];
-    }
-    return ext;
-  } else {
-    return "";
-  }
-}
-
 /*!
  *  Copyright 2008 Fair Oaks Labs, Inc.
  *  All rights reserved.
@@ -135781,7 +135762,7 @@ async function anyToJson(fileContentStringOrFileObj, options) {
       );
     }
   }
-  if (/^(fasta|fas|fa|fna|ffn)$/.test(ext)) {
+  if (/^(fasta|fas|fa|fna|ffn|faa)$/.test(ext)) {
     return fastaToJson(fileContentString, options);
   } else if (/^(gb|gbk)$/.test(ext)) {
     return genbankToJson(fileContentString, options);
@@ -161071,7 +161052,7 @@ function showFileDialog({ multiple = false, onSelect }) {
 }
 
 const name = "@teselagen/ove";
-const version = "0.3.9";
+const version = "0.3.10";
 const main = "./src/index.js";
 const exports$1 = {
 	".": {

package/index.mjs

@@ -30296,17 +30296,17 @@ var _toPrimitive$1 = function (it, S) {
   throw TypeError("Can't convert object to primitive value");
 };
 
-var anObject$3 = _anObject;
+var anObject$5 = _anObject;
 var IE8_DOM_DEFINE$1 = _ie8DomDefine;
 var toPrimitive$2 = _toPrimitive$1;
-var dP$2 = Object.defineProperty;
+var dP$3 = Object.defineProperty;
 
 _objectDp.f = _descriptors ? Object.defineProperty : function defineProperty(O, P, Attributes) {
-  anObject$3(O);
+  anObject$5(O);
   P = toPrimitive$2(P, true);
-  anObject$3(Attributes);
+  anObject$5(Attributes);
   if (IE8_DOM_DEFINE$1) try {
-    return dP$2(O, P, Attributes);
+    return dP$3(O, P, Attributes);
   } catch (e) { /* empty */ }
   if ('get' in Attributes || 'set' in Attributes) throw TypeError('Accessors not supported!');
   if ('value' in Attributes) O[P] = Attributes.value;
@@ -30322,10 +30322,10 @@ var _propertyDesc = function (bitmap, value) {
   };
 };
 
-var dP$1 = _objectDp;
+var dP$2 = _objectDp;
 var createDesc$3 = _propertyDesc;
 var _hide = _descriptors ? function (object, key, value) {
-  return dP$1.f(object, key, createDesc$3(1, value));
+  return dP$2.f(object, key, createDesc$3(1, value));
 } : function (object, key, value) {
   object[key] = value;
   return object;
@@ -30341,7 +30341,7 @@ var core$3 = _coreExports;
 var ctx$1 = _ctx;
 var hide$3 = _hide;
 var has$e = _has;
-var PROTOTYPE$1 = 'prototype';
+var PROTOTYPE$2 = 'prototype';
 
 var $export$8 = function (type, name, source) {
   var IS_FORCED = type & $export$8.F;
@@ -30351,8 +30351,8 @@ var $export$8 = function (type, name, source) {
   var IS_BIND = type & $export$8.B;
   var IS_WRAP = type & $export$8.W;
   var exports = IS_GLOBAL ? core$3 : core$3[name] || (core$3[name] = {});
-  var expProto = exports[PROTOTYPE$1];
-  var target = IS_GLOBAL ? global$5 : IS_STATIC ? global$5[name] : (global$5[name] || {})[PROTOTYPE$1];
+  var expProto = exports[PROTOTYPE$2];
+  var target = IS_GLOBAL ? global$5 : IS_STATIC ? global$5[name] : (global$5[name] || {})[PROTOTYPE$2];
   var key, own, out;
   if (IS_GLOBAL) source = name;
   for (key in source) {
@@ -30376,7 +30376,7 @@ var $export$8 = function (type, name, source) {
           } return new C(a, b, c);
         } return C.apply(this, arguments);
       };
-      F[PROTOTYPE$1] = C[PROTOTYPE$1];
+      F[PROTOTYPE$2] = C[PROTOTYPE$2];
       return F;
     // make static versions for prototype methods
     })(out) : IS_PROTO && typeof out == 'function' ? ctx$1(Function.call, out) : out;
@@ -30513,14 +30513,14 @@ var _sharedKey = function (key) {
 var has$d = _has;
 var toIObject$4 = _toIobject;
 var arrayIndexOf = _arrayIncludes$1(false);
-var IE_PROTO$1 = _sharedKey('IE_PROTO');
+var IE_PROTO$2 = _sharedKey('IE_PROTO');
 
 var _objectKeysInternal = function (object, names) {
   var O = toIObject$4(object);
   var i = 0;
   var result = [];
   var key;
-  for (key in O) if (key != IE_PROTO$1) has$d(O, key) && result.push(key);
+  for (key in O) if (key != IE_PROTO$2) has$d(O, key) && result.push(key);
   // Don't enum bug & hidden keys
   while (names.length > i) if (has$d(O, key = names[i++])) {
     ~arrayIndexOf(result, key) || result.push(key);
@@ -30534,11 +30534,11 @@ var _enumBugKeys = (
 ).split(',');
 
 // 19.1.2.14 / 15.2.3.14 Object.keys(O)
-var $keys$2 = _objectKeysInternal;
-var enumBugKeys = _enumBugKeys;
+var $keys$3 = _objectKeysInternal;
+var enumBugKeys$1 = _enumBugKeys;
 
 var _objectKeys = Object.keys || function keys(O) {
-  return $keys$2(O, enumBugKeys);
+  return $keys$3(O, enumBugKeys$1);
 };
 
 var _objectGops = {};
@@ -30645,27 +30645,19 @@ var _iterators = {};
 
 var _redefine = _hide;
 
-var _objectDps;
-var hasRequired_objectDps;
-
-function require_objectDps () {
-	if (hasRequired_objectDps) return _objectDps;
-	hasRequired_objectDps = 1;
-	var dP = _objectDp;
-	var anObject = _anObject;
-	var getKeys = _objectKeys;
+var dP$1 = _objectDp;
+var anObject$4 = _anObject;
+var getKeys$1 = _objectKeys;
 
-	_objectDps = _descriptors ? Object.defineProperties : function defineProperties(O, Properties) {
-	  anObject(O);
-	  var keys = getKeys(Properties);
-	  var length = keys.length;
-	  var i = 0;
-	  var P;
-	  while (length > i) dP.f(O, P = keys[i++], Properties[P]);
-	  return O;
-	};
-	return _objectDps;
-}
+var _objectDps = _descriptors ? Object.defineProperties : function defineProperties(O, Properties) {
+  anObject$4(O);
+  var keys = getKeys$1(Properties);
+  var length = keys.length;
+  var i = 0;
+  var P;
+  while (length > i) dP$1.f(O, P = keys[i++], Properties[P]);
+  return O;
+};
 
 var _html;
 var hasRequired_html;
@@ -30678,55 +30670,47 @@ function require_html () {
 	return _html;
 }
 
-var _objectCreate;
-var hasRequired_objectCreate;
+// 19.1.2.2 / 15.2.3.5 Object.create(O [, Properties])
+var anObject$3 = _anObject;
+var dPs = _objectDps;
+var enumBugKeys = _enumBugKeys;
+var IE_PROTO$1 = _sharedKey('IE_PROTO');
+var Empty = function () { /* empty */ };
+var PROTOTYPE$1 = 'prototype';
 
-function require_objectCreate () {
-	if (hasRequired_objectCreate) return _objectCreate;
-	hasRequired_objectCreate = 1;
-	// 19.1.2.2 / 15.2.3.5 Object.create(O [, Properties])
-	var anObject = _anObject;
-	var dPs = require_objectDps();
-	var enumBugKeys = _enumBugKeys;
-	var IE_PROTO = _sharedKey('IE_PROTO');
-	var Empty = function () { /* empty */ };
-	var PROTOTYPE = 'prototype';
-
-	// Create object with fake `null` prototype: use iframe Object with cleared prototype
-	var createDict = function () {
-	  // Thrash, waste and sodomy: IE GC bug
-	  var iframe = require_domCreate()('iframe');
-	  var i = enumBugKeys.length;
-	  var lt = '<';
-	  var gt = '>';
-	  var iframeDocument;
-	  iframe.style.display = 'none';
-	  require_html().appendChild(iframe);
-	  iframe.src = 'javascript:'; // eslint-disable-line no-script-url
-	  // createDict = iframe.contentWindow.Object;
-	  // html.removeChild(iframe);
-	  iframeDocument = iframe.contentWindow.document;
-	  iframeDocument.open();
-	  iframeDocument.write(lt + 'script' + gt + 'document.F=Object' + lt + '/script' + gt);
-	  iframeDocument.close();
-	  createDict = iframeDocument.F;
-	  while (i--) delete createDict[PROTOTYPE][enumBugKeys[i]];
-	  return createDict();
-	};
-
-	_objectCreate = Object.create || function create(O, Properties) {
-	  var result;
-	  if (O !== null) {
-	    Empty[PROTOTYPE] = anObject(O);
-	    result = new Empty();
-	    Empty[PROTOTYPE] = null;
-	    // add "__proto__" for Object.getPrototypeOf polyfill
-	    result[IE_PROTO] = O;
-	  } else result = createDict();
-	  return Properties === undefined ? result : dPs(result, Properties);
-	};
-	return _objectCreate;
-}
+// Create object with fake `null` prototype: use iframe Object with cleared prototype
+var createDict = function () {
+  // Thrash, waste and sodomy: IE GC bug
+  var iframe = require_domCreate()('iframe');
+  var i = enumBugKeys.length;
+  var lt = '<';
+  var gt = '>';
+  var iframeDocument;
+  iframe.style.display = 'none';
+  require_html().appendChild(iframe);
+  iframe.src = 'javascript:'; // eslint-disable-line no-script-url
+  // createDict = iframe.contentWindow.Object;
+  // html.removeChild(iframe);
+  iframeDocument = iframe.contentWindow.document;
+  iframeDocument.open();
+  iframeDocument.write(lt + 'script' + gt + 'document.F=Object' + lt + '/script' + gt);
+  iframeDocument.close();
+  createDict = iframeDocument.F;
+  while (i--) delete createDict[PROTOTYPE$1][enumBugKeys[i]];
+  return createDict();
+};
+
+var _objectCreate = Object.create || function create(O, Properties) {
+  var result;
+  if (O !== null) {
+    Empty[PROTOTYPE$1] = anObject$3(O);
+    result = new Empty();
+    Empty[PROTOTYPE$1] = null;
+    // add "__proto__" for Object.getPrototypeOf polyfill
+    result[IE_PROTO$1] = O;
+  } else result = createDict();
+  return Properties === undefined ? result : dPs(result, Properties);
+};
 
 var _wks = {exports: {}};
 
@@ -30752,7 +30736,7 @@ var _setToStringTag = function (it, tag, stat) {
   if (it && !has$c(it = stat ? it : it.prototype, TAG$1)) def(it, TAG$1, { configurable: true, value: tag });
 };
 
-var create$4 = require_objectCreate();
+var create$4 = _objectCreate;
 var descriptor = _propertyDesc;
 var setToStringTag$2 = _setToStringTag;
 var IteratorPrototype = {};
@@ -31326,24 +31310,17 @@ var _objectGopnExt = {};
 
 var _objectGopn = {};
 
-var hasRequired_objectGopn;
-
-function require_objectGopn () {
-	if (hasRequired_objectGopn) return _objectGopn;
-	hasRequired_objectGopn = 1;
-	// 19.1.2.7 / 15.2.3.4 Object.getOwnPropertyNames(O)
-	var $keys = _objectKeysInternal;
-	var hiddenKeys = _enumBugKeys.concat('length', 'prototype');
+// 19.1.2.7 / 15.2.3.4 Object.getOwnPropertyNames(O)
+var $keys$2 = _objectKeysInternal;
+var hiddenKeys = _enumBugKeys.concat('length', 'prototype');
 
-	_objectGopn.f = Object.getOwnPropertyNames || function getOwnPropertyNames(O) {
-	  return $keys(O, hiddenKeys);
-	};
-	return _objectGopn;
-}
+_objectGopn.f = Object.getOwnPropertyNames || function getOwnPropertyNames(O) {
+  return $keys$2(O, hiddenKeys);
+};
 
 // fallback for IE11 buggy Object.getOwnPropertyNames with iframe and window
 var toIObject$2 = _toIobject;
-var gOPN$1 = require_objectGopn().f;
+var gOPN$1 = _objectGopn.f;
 var toString$5 = {}.toString;
 
 var windowNames = typeof window == 'object' && window && Object.getOwnPropertyNames
@@ -31402,7 +31379,7 @@ var toObject$1 = _toObject;
 var toIObject = _toIobject;
 var toPrimitive = _toPrimitive$1;
 var createDesc = _propertyDesc;
-var _create$1 = require_objectCreate();
+var _create$1 = _objectCreate;
 var gOPNExt = _objectGopnExt;
 var $GOPD = _objectGopd;
 var $GOPS = _objectGops;
@@ -31530,7 +31507,7 @@ if (!USE_NATIVE) {
 
   $GOPD.f = $getOwnPropertyDescriptor;
   $DP.f = $defineProperty$1;
-  require_objectGopn().f = gOPNExt.f = $getOwnPropertyNames;
+  _objectGopn.f = gOPNExt.f = $getOwnPropertyNames;
   require_objectPie().f = $propertyIsEnumerable;
   $GOPS.f = $getOwnPropertySymbols;
 
@@ -31712,7 +31689,7 @@ var setPrototypeOf = { "default": setPrototypeOf$1, __esModule: true };
 
 var $export = _export;
 // 19.1.2.2 / 15.2.3.5 Object.create(O [, Properties])
-$export($export.S, 'Object', { create: require_objectCreate() });
+$export($export.S, 'Object', { create: _objectCreate });
 
 var $Object$1 = _coreExports.Object;
 var create$3 = function create(P, D) {
@@ -122986,6 +122963,19 @@ function createInitialSequence(options) {
   };
 }
 
+function extractFileExtension(name) {
+  if (typeof name === "string") {
+    let ext = "";
+    const match = name.match(/\.(\w+)$/);
+    if (match && match[1]) {
+      ext = match[1];
+    }
+    return ext;
+  } else {
+    return "";
+  }
+}
+
 function splitStringIntoLines(string) {
   let lines = [];
   if (string === "") {
@@ -123559,7 +123549,11 @@ function validateSequenceArray(parsingResultArray, options) {
   return parsingResultArray;
 }
 
-function fastaToJson(fileString, options) {
+function fastaToJson(fileString, options = {}) {
+  const ext = extractFileExtension(options.fileName);
+  if (/^(faa)$/.test(ext)) {
+    options.isProtein = true;
+  }
   let resultArray = [];
   let result = null;
   try {
@@ -126031,19 +126025,6 @@ function parseSbolJson(sbolJson, options) {
   };
 }
 
-function extractFileExtension(name) {
-  if (typeof name === "string") {
-    let ext = "";
-    const match = name.match(/\.(\w+)$/);
-    if (match && match[1]) {
-      ext = match[1];
-    }
-    return ext;
-  } else {
-    return "";
-  }
-}
-
 /*!
  *  Copyright 2008 Fair Oaks Labs, Inc.
  *  All rights reserved.
@@ -135760,7 +135741,7 @@ async function anyToJson(fileContentStringOrFileObj, options) {
       );
     }
   }
-  if (/^(fasta|fas|fa|fna|ffn)$/.test(ext)) {
+  if (/^(fasta|fas|fa|fna|ffn|faa)$/.test(ext)) {
     return fastaToJson(fileContentString, options);
   } else if (/^(gb|gbk)$/.test(ext)) {
     return genbankToJson(fileContentString, options);
@@ -161050,7 +161031,7 @@ function showFileDialog({ multiple = false, onSelect }) {
 }
 
 const name = "@teselagen/ove";
-const version = "0.3.9";
+const version = "0.3.10";
 const main = "./src/index.js";
 const exports$1 = {
 	".": {

package/index.umd.js

@@ -23998,7 +23998,7 @@
   var ownKeys$9 = typeof Reflect !== "undefined" && Reflect.ownKeys ? Reflect.ownKeys : hasGetOwnPropertySymbols ? function (obj) {
     return Object.getOwnPropertyNames(obj).concat(Object.getOwnPropertySymbols(obj));
   } : /* istanbul ignore next */Object.getOwnPropertyNames;
-  function toPrimitive$3(value) {
+  function toPrimitive$2(value) {
     return value === null ? null : typeof value === "object" ? "" + value : value;
   }
   function hasProp(target, prop) {
@@ -24927,7 +24927,7 @@
       return this.name_ + "[" + this.value_ + "]";
     };
     _proto.valueOf = function valueOf() {
-      return toPrimitive$3(this.get());
+      return toPrimitive$2(this.get());
     };
     _proto[_Symbol$toPrimitive] = function () {
       return this.valueOf();
@@ -25155,7 +25155,7 @@
       return this.name_ + "[" + this.derivation.toString() + "]";
     };
     _proto.valueOf = function valueOf() {
-      return toPrimitive$3(this.get());
+      return toPrimitive$2(this.get());
     };
     _proto[_Symbol$toPrimitive$1] = function () {
       return this.valueOf();
@@ -57023,10 +57023,18 @@
     }
   };
 
-  // Thank's IE8 for his funny defineProperty
-  var _descriptors = !_fails(function () {
-    return Object.defineProperty({}, 'a', { get: function () { return 7; } }).a != 7;
-  });
+  var _descriptors;
+  var hasRequired_descriptors;
+
+  function require_descriptors () {
+  	if (hasRequired_descriptors) return _descriptors;
+  	hasRequired_descriptors = 1;
+  	// Thank's IE8 for his funny defineProperty
+  	_descriptors = !_fails(function () {
+  	  return Object.defineProperty({}, 'a', { get: function () { return 7; } }).a != 7;
+  	});
+  	return _descriptors;
+  }
 
   var _domCreate;
   var hasRequired_domCreate;
@@ -57044,9 +57052,17 @@
   	return _domCreate;
   }
 
-  var _ie8DomDefine = !_descriptors && !_fails(function () {
-    return Object.defineProperty(require_domCreate()('div'), 'a', { get: function () { return 7; } }).a != 7;
-  });
+  var _ie8DomDefine;
+  var hasRequired_ie8DomDefine;
+
+  function require_ie8DomDefine () {
+  	if (hasRequired_ie8DomDefine) return _ie8DomDefine;
+  	hasRequired_ie8DomDefine = 1;
+  	_ie8DomDefine = !require_descriptors() && !_fails(function () {
+  	  return Object.defineProperty(require_domCreate()('div'), 'a', { get: function () { return 7; } }).a != 7;
+  	});
+  	return _ie8DomDefine;
+  }
 
   // 7.1.1 ToPrimitive(input [, PreferredType])
   var isObject$6 = _isObject;
@@ -57061,22 +57077,29 @@
     throw TypeError("Can't convert object to primitive value");
   };
 
-  var anObject$3 = _anObject;
-  var IE8_DOM_DEFINE$1 = _ie8DomDefine;
-  var toPrimitive$2 = _toPrimitive$1;
-  var dP$2 = Object.defineProperty;
-
-  _objectDp.f = _descriptors ? Object.defineProperty : function defineProperty(O, P, Attributes) {
-    anObject$3(O);
-    P = toPrimitive$2(P, true);
-    anObject$3(Attributes);
-    if (IE8_DOM_DEFINE$1) try {
-      return dP$2(O, P, Attributes);
-    } catch (e) { /* empty */ }
-    if ('get' in Attributes || 'set' in Attributes) throw TypeError('Accessors not supported!');
-    if ('value' in Attributes) O[P] = Attributes.value;
-    return O;
-  };
+  var hasRequired_objectDp;
+
+  function require_objectDp () {
+  	if (hasRequired_objectDp) return _objectDp;
+  	hasRequired_objectDp = 1;
+  	var anObject = _anObject;
+  	var IE8_DOM_DEFINE = require_ie8DomDefine();
+  	var toPrimitive = _toPrimitive$1;
+  	var dP = Object.defineProperty;
+
+  	_objectDp.f = require_descriptors() ? Object.defineProperty : function defineProperty(O, P, Attributes) {
+  	  anObject(O);
+  	  P = toPrimitive(P, true);
+  	  anObject(Attributes);
+  	  if (IE8_DOM_DEFINE) try {
+  	    return dP(O, P, Attributes);
+  	  } catch (e) { /* empty */ }
+  	  if ('get' in Attributes || 'set' in Attributes) throw TypeError('Accessors not supported!');
+  	  if ('value' in Attributes) O[P] = Attributes.value;
+  	  return O;
+  	};
+  	return _objectDp;
+  }
 
   var _propertyDesc = function (bitmap, value) {
     return {
@@ -57087,10 +57110,10 @@
     };
   };
 
-  var dP$1 = _objectDp;
+  var dP$2 = require_objectDp();
   var createDesc$3 = _propertyDesc;
-  var _hide = _descriptors ? function (object, key, value) {
-    return dP$1.f(object, key, createDesc$3(1, value));
+  var _hide = require_descriptors() ? function (object, key, value) {
+    return dP$2.f(object, key, createDesc$3(1, value));
   } : function (object, key, value) {
     object[key] = value;
     return object;
@@ -57106,7 +57129,7 @@
   var ctx$1 = _ctx;
   var hide$2 = _hide;
   var has$d = _has;
-  var PROTOTYPE$1 = 'prototype';
+  var PROTOTYPE$2 = 'prototype';
 
   var $export$8 = function (type, name, source) {
     var IS_FORCED = type & $export$8.F;
@@ -57116,8 +57139,8 @@
     var IS_BIND = type & $export$8.B;
     var IS_WRAP = type & $export$8.W;
     var exports = IS_GLOBAL ? core$3 : core$3[name] || (core$3[name] = {});
-    var expProto = exports[PROTOTYPE$1];
-    var target = IS_GLOBAL ? global$4 : IS_STATIC ? global$4[name] : (global$4[name] || {})[PROTOTYPE$1];
+    var expProto = exports[PROTOTYPE$2];
+    var target = IS_GLOBAL ? global$4 : IS_STATIC ? global$4[name] : (global$4[name] || {})[PROTOTYPE$2];
     var key, own, out;
     if (IS_GLOBAL) source = name;
     for (key in source) {
@@ -57141,7 +57164,7 @@
             } return new C(a, b, c);
           } return C.apply(this, arguments);
         };
-        F[PROTOTYPE$1] = C[PROTOTYPE$1];
+        F[PROTOTYPE$2] = C[PROTOTYPE$2];
         return F;
       // make static versions for prototype methods
       })(out) : IS_PROTO && typeof out == 'function' ? ctx$1(Function.call, out) : out;
@@ -57170,20 +57193,12 @@
     return toString$4.call(it).slice(8, -1);
   };
 
-  var _iobject;
-  var hasRequired_iobject;
-
-  function require_iobject () {
-  	if (hasRequired_iobject) return _iobject;
-  	hasRequired_iobject = 1;
-  	// fallback for non-array-like ES3 and non-enumerable old V8 strings
-  	var cof = _cof;
-  	// eslint-disable-next-line no-prototype-builtins
-  	_iobject = Object('z').propertyIsEnumerable(0) ? Object : function (it) {
-  	  return cof(it) == 'String' ? it.split('') : Object(it);
-  	};
-  	return _iobject;
-  }
+  // fallback for non-array-like ES3 and non-enumerable old V8 strings
+  var cof$2 = _cof;
+  // eslint-disable-next-line no-prototype-builtins
+  var _iobject = Object('z').propertyIsEnumerable(0) ? Object : function (it) {
+    return cof$2(it) == 'String' ? it.split('') : Object(it);
+  };
 
   // 7.2.1 RequireObjectCoercible(argument)
   var _defined = function (it) {
@@ -57192,7 +57207,7 @@
   };
 
   // to indexed object, toObject with fallback for non-array-like ES3 strings
-  var IObject = require_iobject();
+  var IObject = _iobject;
   var defined$2 = _defined;
   var _toIobject = function (it) {
     return IObject(defined$2(it));
@@ -57278,14 +57293,14 @@
   var has$c = _has;
   var toIObject$4 = _toIobject;
   var arrayIndexOf = _arrayIncludes$1(false);
-  var IE_PROTO$1 = _sharedKey('IE_PROTO');
+  var IE_PROTO$2 = _sharedKey('IE_PROTO');
 
   var _objectKeysInternal = function (object, names) {
     var O = toIObject$4(object);
     var i = 0;
     var result = [];
     var key;
-    for (key in O) if (key != IE_PROTO$1) has$c(O, key) && result.push(key);
+    for (key in O) if (key != IE_PROTO$2) has$c(O, key) && result.push(key);
     // Don't enum bug & hidden keys
     while (names.length > i) if (has$c(O, key = names[i++])) {
       ~arrayIndexOf(result, key) || result.push(key);
@@ -57300,10 +57315,10 @@
 
   // 19.1.2.14 / 15.2.3.14 Object.keys(O)
   var $keys$3 = _objectKeysInternal;
-  var enumBugKeys = _enumBugKeys;
+  var enumBugKeys$1 = _enumBugKeys;
 
   var _objectKeys = Object.keys || function keys(O) {
-    return $keys$3(O, enumBugKeys);
+    return $keys$3(O, enumBugKeys$1);
   };
 
   var _objectGops = {};
@@ -57334,12 +57349,12 @@
   	if (hasRequired_objectAssign) return _objectAssign;
   	hasRequired_objectAssign = 1;
   	// 19.1.2.1 Object.assign(target, source, ...)
-  	var DESCRIPTORS = _descriptors;
+  	var DESCRIPTORS = require_descriptors();
   	var getKeys = _objectKeys;
   	var gOPS = _objectGops;
   	var pIE = require_objectPie();
   	var toObject = _toObject;
-  	var IObject = require_iobject();
+  	var IObject = _iobject;
   	var $assign = Object.assign;
 
   	// should work with symbols and should have deterministic property order (V8 bug)
@@ -57410,27 +57425,19 @@
 
   var _redefine = _hide;
 
-  var _objectDps;
-  var hasRequired_objectDps;
-
-  function require_objectDps () {
-  	if (hasRequired_objectDps) return _objectDps;
-  	hasRequired_objectDps = 1;
-  	var dP = _objectDp;
-  	var anObject = _anObject;
-  	var getKeys = _objectKeys;
+  var dP$1 = require_objectDp();
+  var anObject$4 = _anObject;
+  var getKeys$1 = _objectKeys;
 
-  	_objectDps = _descriptors ? Object.defineProperties : function defineProperties(O, Properties) {
-  	  anObject(O);
-  	  var keys = getKeys(Properties);
-  	  var length = keys.length;
-  	  var i = 0;
-  	  var P;
-  	  while (length > i) dP.f(O, P = keys[i++], Properties[P]);
-  	  return O;
-  	};
-  	return _objectDps;
-  }
+  var _objectDps = require_descriptors() ? Object.defineProperties : function defineProperties(O, Properties) {
+    anObject$4(O);
+    var keys = getKeys$1(Properties);
+    var length = keys.length;
+    var i = 0;
+    var P;
+    while (length > i) dP$1.f(O, P = keys[i++], Properties[P]);
+    return O;
+  };
 
   var _html;
   var hasRequired_html;
@@ -57443,55 +57450,47 @@
   	return _html;
   }
 
-  var _objectCreate;
-  var hasRequired_objectCreate;
+  // 19.1.2.2 / 15.2.3.5 Object.create(O [, Properties])
+  var anObject$3 = _anObject;
+  var dPs = _objectDps;
+  var enumBugKeys = _enumBugKeys;
+  var IE_PROTO$1 = _sharedKey('IE_PROTO');
+  var Empty = function () { /* empty */ };
+  var PROTOTYPE$1 = 'prototype';
 
-  function require_objectCreate () {
-  	if (hasRequired_objectCreate) return _objectCreate;
-  	hasRequired_objectCreate = 1;
-  	// 19.1.2.2 / 15.2.3.5 Object.create(O [, Properties])
-  	var anObject = _anObject;
-  	var dPs = require_objectDps();
-  	var enumBugKeys = _enumBugKeys;
-  	var IE_PROTO = _sharedKey('IE_PROTO');
-  	var Empty = function () { /* empty */ };
-  	var PROTOTYPE = 'prototype';
-
-  	// Create object with fake `null` prototype: use iframe Object with cleared prototype
-  	var createDict = function () {
-  	  // Thrash, waste and sodomy: IE GC bug
-  	  var iframe = require_domCreate()('iframe');
-  	  var i = enumBugKeys.length;
-  	  var lt = '<';
-  	  var gt = '>';
-  	  var iframeDocument;
-  	  iframe.style.display = 'none';
-  	  require_html().appendChild(iframe);
-  	  iframe.src = 'javascript:'; // eslint-disable-line no-script-url
-  	  // createDict = iframe.contentWindow.Object;
-  	  // html.removeChild(iframe);
-  	  iframeDocument = iframe.contentWindow.document;
-  	  iframeDocument.open();
-  	  iframeDocument.write(lt + 'script' + gt + 'document.F=Object' + lt + '/script' + gt);
-  	  iframeDocument.close();
-  	  createDict = iframeDocument.F;
-  	  while (i--) delete createDict[PROTOTYPE][enumBugKeys[i]];
-  	  return createDict();
-  	};
-
-  	_objectCreate = Object.create || function create(O, Properties) {
-  	  var result;
-  	  if (O !== null) {
-  	    Empty[PROTOTYPE] = anObject(O);
-  	    result = new Empty();
-  	    Empty[PROTOTYPE] = null;
-  	    // add "__proto__" for Object.getPrototypeOf polyfill
-  	    result[IE_PROTO] = O;
-  	  } else result = createDict();
-  	  return Properties === undefined ? result : dPs(result, Properties);
-  	};
-  	return _objectCreate;
-  }
+  // Create object with fake `null` prototype: use iframe Object with cleared prototype
+  var createDict = function () {
+    // Thrash, waste and sodomy: IE GC bug
+    var iframe = require_domCreate()('iframe');
+    var i = enumBugKeys.length;
+    var lt = '<';
+    var gt = '>';
+    var iframeDocument;
+    iframe.style.display = 'none';
+    require_html().appendChild(iframe);
+    iframe.src = 'javascript:'; // eslint-disable-line no-script-url
+    // createDict = iframe.contentWindow.Object;
+    // html.removeChild(iframe);
+    iframeDocument = iframe.contentWindow.document;
+    iframeDocument.open();
+    iframeDocument.write(lt + 'script' + gt + 'document.F=Object' + lt + '/script' + gt);
+    iframeDocument.close();
+    createDict = iframeDocument.F;
+    while (i--) delete createDict[PROTOTYPE$1][enumBugKeys[i]];
+    return createDict();
+  };
+
+  var _objectCreate = Object.create || function create(O, Properties) {
+    var result;
+    if (O !== null) {
+      Empty[PROTOTYPE$1] = anObject$3(O);
+      result = new Empty();
+      Empty[PROTOTYPE$1] = null;
+      // add "__proto__" for Object.getPrototypeOf polyfill
+      result[IE_PROTO$1] = O;
+    } else result = createDict();
+    return Properties === undefined ? result : dPs(result, Properties);
+  };
 
   var _wks = {exports: {}};
 
@@ -57509,7 +57508,7 @@
 
   var _wksExports = _wks.exports;
 
-  var def = _objectDp.f;
+  var def = require_objectDp().f;
   var has$b = _has;
   var TAG$1 = _wksExports('toStringTag');
 
@@ -57517,7 +57516,7 @@
     if (it && !has$b(it = stat ? it : it.prototype, TAG$1)) def(it, TAG$1, { configurable: true, value: tag });
   };
 
-  var create$4 = require_objectCreate();
+  var create$4 = _objectCreate;
   var descriptor = _propertyDesc;
   var setToStringTag$2 = _setToStringTag;
   var IteratorPrototype = {};
@@ -57823,7 +57822,7 @@
     return it !== undefined && (Iterators.Array === it || ArrayProto[ITERATOR] === it);
   };
 
-  var $defineProperty$1 = _objectDp;
+  var $defineProperty$1 = require_objectDp();
   var createDesc$2 = _propertyDesc;
 
   var _createProperty = function (object, index, value) {
@@ -57956,7 +57955,7 @@
 
   var $export$3 = _export;
   // 19.1.2.4 / 15.2.3.6 Object.defineProperty(O, P, Attributes)
-  $export$3($export$3.S + $export$3.F * !_descriptors, 'Object', { defineProperty: _objectDp.f });
+  $export$3($export$3.S + $export$3.F * !require_descriptors(), 'Object', { defineProperty: require_objectDp().f });
 
   var $Object$1 = _coreExports.Object;
   var defineProperty$6 = function defineProperty(it, key, desc) {
@@ -58004,7 +58003,7 @@
   var META$1 = _uid('meta');
   var isObject$5 = _isObject;
   var has$9 = _has;
-  var setDesc = _objectDp.f;
+  var setDesc = require_objectDp().f;
   var id$1 = 0;
   var isExtensible = Object.isExtensible || function () {
     return true;
@@ -58059,7 +58058,7 @@
 
   var core = _coreExports;
   var wksExt$1 = _wksExt;
-  var defineProperty$4 = _objectDp.f;
+  var defineProperty$4 = require_objectDp().f;
   var _wksDefine = function (name) {
     var $Symbol = core.Symbol || (core.Symbol = {} );
     if (name.charAt(0) != '_' && !(name in $Symbol)) defineProperty$4($Symbol, name, { value: wksExt$1.f(name) });
@@ -58126,10 +58125,10 @@
   var toIObject$1 = _toIobject;
   var toPrimitive$1 = _toPrimitive$1;
   var has$8 = _has;
-  var IE8_DOM_DEFINE = _ie8DomDefine;
+  var IE8_DOM_DEFINE = require_ie8DomDefine();
   var gOPD$2 = Object.getOwnPropertyDescriptor;
 
-  _objectGopd.f = _descriptors ? gOPD$2 : function getOwnPropertyDescriptor(O, P) {
+  _objectGopd.f = require_descriptors() ? gOPD$2 : function getOwnPropertyDescriptor(O, P) {
     O = toIObject$1(O);
     P = toPrimitive$1(P, true);
     if (IE8_DOM_DEFINE) try {
@@ -58141,7 +58140,7 @@
   // ECMAScript 6 symbols shim
   var global$1 = _globalExports;
   var has$7 = _has;
-  var DESCRIPTORS = _descriptors;
+  var DESCRIPTORS = require_descriptors();
   var $export$2 = _export;
   var redefine = _redefine;
   var META = _metaExports.KEY;
@@ -58160,11 +58159,11 @@
   var toIObject = _toIobject;
   var toPrimitive = _toPrimitive$1;
   var createDesc = _propertyDesc;
-  var _create$1 = require_objectCreate();
+  var _create$1 = _objectCreate;
   var gOPNExt = _objectGopnExt;
   var $GOPD = _objectGopd;
   var $GOPS = _objectGops;
-  var $DP = _objectDp;
+  var $DP = require_objectDp();
   var $keys$1 = _objectKeys;
   var gOPD$1 = $GOPD.f;
   var dP = $DP.f;
@@ -58470,7 +58469,7 @@
 
   var $export = _export;
   // 19.1.2.2 / 15.2.3.5 Object.create(O [, Properties])
-  $export($export.S, 'Object', { create: require_objectCreate() });
+  $export($export.S, 'Object', { create: _objectCreate });
 
   var $Object = _coreExports.Object;
   var create$3 = function create(P, D) {
@@ -151356,6 +151355,19 @@
     };
   }
 
+  function extractFileExtension(name) {
+    if (typeof name === "string") {
+      let ext = "";
+      const match = name.match(/\.(\w+)$/);
+      if (match && match[1]) {
+        ext = match[1];
+      }
+      return ext;
+    } else {
+      return "";
+    }
+  }
+
   function splitStringIntoLines(string) {
     let lines = [];
     if (string === "") {
@@ -151929,7 +151941,11 @@
     return parsingResultArray;
   }
 
-  function fastaToJson(fileString, options) {
+  function fastaToJson(fileString, options = {}) {
+    const ext = extractFileExtension(options.fileName);
+    if (/^(faa)$/.test(ext)) {
+      options.isProtein = true;
+    }
     let resultArray = [];
     let result = null;
     try {
@@ -154401,19 +154417,6 @@
     };
   }
 
-  function extractFileExtension(name) {
-    if (typeof name === "string") {
-      let ext = "";
-      const match = name.match(/\.(\w+)$/);
-      if (match && match[1]) {
-        ext = match[1];
-      }
-      return ext;
-    } else {
-      return "";
-    }
-  }
-
   /*!
    *  Copyright 2008 Fair Oaks Labs, Inc.
    *  All rights reserved.
@@ -164130,7 +164133,7 @@
         );
       }
     }
-    if (/^(fasta|fas|fa|fna|ffn)$/.test(ext)) {
+    if (/^(fasta|fas|fa|fna|ffn|faa)$/.test(ext)) {
       return fastaToJson(fileContentString, options);
     } else if (/^(gb|gbk)$/.test(ext)) {
       return genbankToJson(fileContentString, options);
@@ -188648,7 +188651,7 @@ double click --> edit`}`;
   }
 
   const name = "@teselagen/ove";
-  const version = "0.3.9";
+  const version = "0.3.10";
   const main = "./src/index.js";
   const exports$1 = {
   	".": {

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@teselagen/ove",
-  "version": "0.3.10",
+  "version": "0.3.11",
   "main": "./src/index.js",
   "exports": {
     ".": {
@@ -18,7 +18,7 @@
     "@teselagen/ui": "0.3.10",
     "@teselagen/file-utils": "0.3.9",
     "@teselagen/bounce-loader": "0.3.7",
-    "@teselagen/bio-parsers": "0.3.7",
+    "@teselagen/bio-parsers": "0.3.8",
     "@blueprintjs/core": "3.52.0",
     "@blueprintjs/datetime": "3.23.19",
     "@blueprintjs/icons": "3.33.0",