@teselagen/ove 0.0.14 → 0.0.15
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/index.umd.js +164777 -135861
- package/package.json +78 -2
- package/src/AlignmentTool/index.js +16 -0
- package/src/AlignmentView/AlignmentVisibilityTool.js +105 -0
- package/src/AlignmentView/EditTrackNameDialog.js +34 -0
- package/src/AlignmentView/HorizontalPanelDragHandle.js +35 -0
- package/src/AlignmentView/Minimap.js +520 -0
- package/src/AlignmentView/Mismatches.js +134 -0
- package/src/AlignmentView/PairwiseAlignmentView.js +68 -0
- package/src/AlignmentView/PerformantSelectionLayer.js +32 -0
- package/src/AlignmentView/coerceInitialValue.js +7 -0
- package/src/AlignmentView/getGapMap.js +12 -0
- package/src/AlignmentView/getGaps.js +27 -0
- package/src/AlignmentView/getPairwiseOverviewLinearViewOptions.js +38 -0
- package/src/AlignmentView/getTrackFromEvent.js +25 -0
- package/src/AlignmentView/index.js +2058 -0
- package/src/AlignmentView/isTargetWithinEl.js +6 -0
- package/src/AlignmentView/style.css +100 -0
- package/src/AlignmentView/updateTrackHelper.js +58 -0
- package/src/AutoAnnotate.js +500 -0
- package/src/AutoAnnotateBpMatchingDialog.js +208 -0
- package/src/CircularView/Axis.js +40 -0
- package/src/CircularView/AxisNumbers.js +35 -0
- package/src/CircularView/Caret.js +63 -0
- package/src/CircularView/CircularDnaSequence.js +73 -0
- package/src/CircularView/CircularZoomMinimap.js +16 -0
- package/src/CircularView/Cutsite.js +18 -0
- package/src/CircularView/Cutsites.js +113 -0
- package/src/CircularView/DeletionLayer.js +28 -0
- package/src/CircularView/Feature.js +83 -0
- package/src/CircularView/Labels/index.js +536 -0
- package/src/CircularView/Labels/relaxLabelAngles.js +157 -0
- package/src/CircularView/Labels/relaxLabels_DEPRECATED.js +105 -0
- package/src/CircularView/Labels/style.css +55 -0
- package/src/CircularView/Orf.js +25 -0
- package/src/CircularView/Part.js +34 -0
- package/src/CircularView/PositionAnnotationOnCircle.js +26 -0
- package/src/CircularView/Primer.js +41 -0
- package/src/CircularView/RotateCircularViewSlider.js +82 -0
- package/src/CircularView/SelectionLayer.js +132 -0
- package/src/CircularView/VeTopRightContainer.js +12 -0
- package/src/CircularView/ZoomCircularViewSlider.js +62 -0
- package/src/CircularView/drawAnnotations.js +433 -0
- package/src/CircularView/drawDirectedPiePiece.js +142 -0
- package/src/CircularView/getAngleForPositionMidpoint.js +3 -0
- package/src/CircularView/getInternalLabel.js +40 -0
- package/src/CircularView/getRangeAnglesSpecial.js +12 -0
- package/src/CircularView/getYOffset.js +15 -0
- package/src/CircularView/index.d.ts +20 -0
- package/src/CircularView/index.js +930 -0
- package/src/CircularView/normalizeAngle.js +3 -0
- package/src/CircularView/normalizeAngleRange.js +9 -0
- package/src/CircularView/positionCutsites.js +6 -0
- package/src/CircularView/shouldFlipText.js +4 -0
- package/src/CircularView/style.css +47 -0
- package/src/CircularView/utils/polarToSpecialCartesian.js +7 -0
- package/src/CreateAnnotationsPage.js +96 -0
- package/src/CreateCustomEnzyme/index.js +337 -0
- package/src/CreateCustomEnzyme/style.css +100 -0
- package/src/CutsiteFilter/AdditionalCutsiteInfoDialog.js +599 -0
- package/src/CutsiteFilter/index.js +408 -0
- package/src/CutsiteFilter/style.css +23 -0
- package/src/CutsiteFilter/withRestrictionEnzymes.js +15 -0
- package/src/DigestTool/AddLaddersDialog.js +82 -0
- package/src/DigestTool/DigestTool.js +223 -0
- package/src/DigestTool/Ladder.css +20 -0
- package/src/DigestTool/Ladder.js +303 -0
- package/src/DigestTool/createFragmentLines.js +120 -0
- package/src/DigestTool/ladderDefaults.js +26 -0
- package/src/DigestTool/ruler.css +89 -0
- package/src/Editor/CommandHotkeyHandler.js +44 -0
- package/src/Editor/DropHandler.css +21 -0
- package/src/Editor/DropHandler.js +64 -0
- package/src/Editor/FillWindow.js +46 -0
- package/src/Editor/darkmode.css +98 -0
- package/src/Editor/index.js +1005 -0
- package/src/Editor/style.css +235 -0
- package/src/Editor/userDefinedHandlersAndOpts.js +56 -0
- package/src/EnzymeViewer/index.js +81 -0
- package/src/EnzymeViewer/style.css +6 -0
- package/src/FindBar/index.js +411 -0
- package/src/FindBar/style.css +46 -0
- package/src/GlobalDialog.js +66 -0
- package/src/GlobalDialogUtils.js +85 -0
- package/src/LinearView/SequenceName.js +15 -0
- package/src/LinearView/ZoomLinearView.js +47 -0
- package/src/LinearView/index.js +374 -0
- package/src/LinearView/style.css +12 -0
- package/src/ManageEnzymes/index.js +326 -0
- package/src/ManageEnzymes/style.css +100 -0
- package/src/MenuBar/defaultConfig.js +149 -0
- package/src/MenuBar/index.js +98 -0
- package/src/MenuBar/viewSubmenu.js +479 -0
- package/src/PCRTool/PCRTool.js +173 -0
- package/src/Reflex/Browser.js +107 -0
- package/src/Reflex/ReflexContainer.js +802 -0
- package/src/Reflex/ReflexElement.js +160 -0
- package/src/Reflex/ReflexEvents.js +77 -0
- package/src/Reflex/ReflexSplitter.js +205 -0
- package/src/Reflex/index.js +5 -0
- package/src/Reflex/reflex-styles.css +128 -0
- package/src/Reflex/reflex-styles.css.map +9 -0
- package/src/RowItem/AnnotationContainerHolder.js +20 -0
- package/src/RowItem/AnnotationPositioner.js +27 -0
- package/src/RowItem/Axis.js +149 -0
- package/src/RowItem/Caret/index.js +64 -0
- package/src/RowItem/Caret/style.css +8 -0
- package/src/RowItem/Chromatograms/Chromatogram.js +289 -0
- package/src/RowItem/CutsiteSelectionLayers.js +47 -0
- package/src/RowItem/Cutsites.js +271 -0
- package/src/RowItem/DeletionLayers/index.js +113 -0
- package/src/RowItem/DeletionLayers/style.css +5 -0
- package/src/RowItem/Labels.js +327 -0
- package/src/RowItem/Orf.js +109 -0
- package/src/RowItem/Orfs.js +35 -0
- package/src/RowItem/ReplacementLayers/style.css +5 -0
- package/src/RowItem/SelectionLayer/index.js +184 -0
- package/src/RowItem/SelectionLayer/style.css +21 -0
- package/src/RowItem/Sequence.js +269 -0
- package/src/RowItem/StackedAnnotations/PointedAnnotation.js +347 -0
- package/src/RowItem/StackedAnnotations/getStructuredBases.js +97 -0
- package/src/RowItem/StackedAnnotations/index.js +182 -0
- package/src/RowItem/StackedAnnotations/primerBases.js +218 -0
- package/src/RowItem/StackedAnnotations/style.css +14 -0
- package/src/RowItem/Translations/AASliver.js +190 -0
- package/src/RowItem/Translations/Translation.js +162 -0
- package/src/RowItem/Translations/index.js +54 -0
- package/src/RowItem/Translations/style.css +3 -0
- package/src/RowItem/constants.js +3 -0
- package/src/RowItem/getCutsiteLabelHeights.js +56 -0
- package/src/RowItem/getXStartAndWidthFromNonCircularRange.js +12 -0
- package/src/RowItem/getXStartAndWidthOfRangeWrtRow.js +27 -0
- package/src/RowItem/getXStartAndWidthOfRowAnnotation.js +19 -0
- package/src/RowItem/index.js +647 -0
- package/src/RowItem/partOverhangs.js +6 -0
- package/src/RowItem/style.css +103 -0
- package/src/RowItem/utils.js +32 -0
- package/src/RowView/estimateRowHeight.js +184 -0
- package/src/RowView/index.d.ts +10 -0
- package/src/RowView/index.js +554 -0
- package/src/RowView/style.css +12 -0
- package/src/SimpleCircularOrLinearView.js +379 -0
- package/src/SimpleOligoPreview.js +39 -0
- package/src/StatusBar/MeltingTemp.js +81 -0
- package/src/StatusBar/index.js +275 -0
- package/src/StatusBar/style.css +38 -0
- package/src/ToolBar/ToolbarItem.js +194 -0
- package/src/ToolBar/alignmentTool.js +503 -0
- package/src/ToolBar/array_move.js +10 -0
- package/src/ToolBar/cutsiteTool.js +88 -0
- package/src/ToolBar/downloadTool.js +38 -0
- package/src/ToolBar/editTool.js +26 -0
- package/src/ToolBar/featureTool.js +34 -0
- package/src/ToolBar/findTool.js +2 -0
- package/src/ToolBar/importTool.js +27 -0
- package/src/ToolBar/index.js +231 -0
- package/src/ToolBar/inlineFindTool.js +38 -0
- package/src/ToolBar/oligoTool.js +30 -0
- package/src/ToolBar/orfTool.js +141 -0
- package/src/ToolBar/partTool.js +47 -0
- package/src/ToolBar/printTool.js +31 -0
- package/src/ToolBar/redoTool.js +30 -0
- package/src/ToolBar/saveTool.js +48 -0
- package/src/ToolBar/style.css +138 -0
- package/src/ToolBar/undoTool.js +30 -0
- package/src/ToolBar/veToolbarIcons/find.png +0 -0
- package/src/ToolBar/veToolbarIcons/fullscreen.png +0 -0
- package/src/ToolBar/veToolbarIcons/linear.png +0 -0
- package/src/ToolBar/veToolbarIcons/pie.png +0 -0
- package/src/ToolBar/veToolbarIcons/print.png +0 -0
- package/src/ToolBar/veToolbarIcons/save.png +0 -0
- package/src/ToolBar/veToolbarIcons/show_cut_sites.png +0 -0
- package/src/ToolBar/veToolbarIcons/show_features.png +0 -0
- package/src/ToolBar/veToolbarIcons/show_orfs.png +0 -0
- package/src/ToolBar/veToolbarIcons/show_primers.png +0 -0
- package/src/ToolBar/veToolbarIcons/toggle_views.svg +1 -0
- package/src/ToolBar/versionHistoryTool.js +20 -0
- package/src/ToolBar/visibilityTool.js +39 -0
- package/src/VersionHistoryView/index.js +215 -0
- package/src/addAlignment.js +6 -0
- package/src/commands/getOveHotkeyDefs.js +12 -0
- package/src/commands/index.js +1585 -0
- package/src/constants/constants.js +2 -0
- package/src/constants/dnaToColor.js +17 -0
- package/src/constants/draggableClassnames.js +5 -0
- package/src/constants/findToolConstants.js +1 -0
- package/src/constants/orfFrameToColorMap.js +10 -0
- package/src/constants/rowviewContants.js +3 -0
- package/src/constants/specialCutsiteFilterOptions.js +22 -0
- package/src/constants.js +1 -0
- package/src/createVectorEditor/index.js +138 -0
- package/src/createVectorEditor/makeStore.js +34 -0
- package/src/fileUtils.js +103 -0
- package/src/helperComponents/AddOrEditAnnotationDialog/index.js +711 -0
- package/src/helperComponents/AddOrEditAnnotationDialog/style.css +11 -0
- package/src/helperComponents/AddOrEditFeatureDialog/index.js +58 -0
- package/src/helperComponents/AddOrEditPartDialog/index.js +101 -0
- package/src/helperComponents/AddOrEditPrimerDialog/EditCaretPosition.js +234 -0
- package/src/helperComponents/AddOrEditPrimerDialog/index.js +329 -0
- package/src/helperComponents/AddOrEditPrimerDialog/style.css +41 -0
- package/src/helperComponents/EnzymesDialog/index.js +904 -0
- package/src/helperComponents/EnzymesDialog/style.css +21 -0
- package/src/helperComponents/GoToDialog.js +21 -0
- package/src/helperComponents/MergeFeaturesDialog/index.js +253 -0
- package/src/helperComponents/MergeFeaturesDialog/style.css +3 -0
- package/src/helperComponents/MultipleSeqsDetectedOnImportDialog.js +74 -0
- package/src/helperComponents/PinchHelper/PinchHelper.js +24 -0
- package/src/helperComponents/PrintDialog/index.js +396 -0
- package/src/helperComponents/PrintDialog/style.css +4 -0
- package/src/helperComponents/PropertiesDialog/ColorPicker.js +30 -0
- package/src/helperComponents/PropertiesDialog/CutsiteProperties.js +185 -0
- package/src/helperComponents/PropertiesDialog/FeatureProperties.js +6 -0
- package/src/helperComponents/PropertiesDialog/GenbankView.js +74 -0
- package/src/helperComponents/PropertiesDialog/GeneralProperties.js +140 -0
- package/src/helperComponents/PropertiesDialog/GenericAnnotationProperties.js +406 -0
- package/src/helperComponents/PropertiesDialog/OrfProperties.js +117 -0
- package/src/helperComponents/PropertiesDialog/PartProperties.js +9 -0
- package/src/helperComponents/PropertiesDialog/PrimerProperties.js +19 -0
- package/src/helperComponents/PropertiesDialog/SingleEnzymeCutsiteInfo.js +131 -0
- package/src/helperComponents/PropertiesDialog/TranslationProperties.js +149 -0
- package/src/helperComponents/PropertiesDialog/index.js +166 -0
- package/src/helperComponents/PropertiesDialog/style.css +68 -0
- package/src/helperComponents/PropertiesDialog/typeField.js +24 -0
- package/src/helperComponents/PropertiesDialog/utils.js +37 -0
- package/src/helperComponents/RemoveDuplicates/index.js +194 -0
- package/src/helperComponents/RenameSequenceDialog.js +7 -0
- package/src/helperComponents/SelectDialog.js +150 -0
- package/src/helperComponents/UncontrolledSliderWithPlusMinusBtns.css +5 -0
- package/src/helperComponents/UncontrolledSliderWithPlusMinusBtns.js +134 -0
- package/src/helperComponents/VeWarning/index.js +22 -0
- package/src/helperComponents/VeWarning/style.css +10 -0
- package/src/helperComponents/createSimpleDialog.js +89 -0
- package/src/helperComponents/partTagSearch.js +72 -0
- package/src/helperComponents/simpleDialog.css +13 -0
- package/src/helperComponents/withHover.js +90 -0
- package/src/index.js +60 -0
- package/src/redux/alignments.js +373 -0
- package/src/redux/annotationLabelVisibility.js +53 -0
- package/src/redux/annotationVisibility.js +196 -0
- package/src/redux/annotationsToSupport.js +104 -0
- package/src/redux/caretPosition.js +27 -0
- package/src/redux/charWidth.js +22 -0
- package/src/redux/copyOptions.js +34 -0
- package/src/redux/createYourOwnEnzyme.js +39 -0
- package/src/redux/deletionLayers.js +36 -0
- package/src/redux/digestTool.js +34 -0
- package/src/redux/featureLengthsToHide.js +27 -0
- package/src/redux/findTool.js +79 -0
- package/src/redux/frameTranslations.js +52 -0
- package/src/redux/hoveredAnnotation.js +24 -0
- package/src/redux/index.js +196 -0
- package/src/redux/labelLineIntensity.js +25 -0
- package/src/redux/labelSize.js +23 -0
- package/src/redux/lastSavedId.js +20 -0
- package/src/redux/middleware.js +112 -0
- package/src/redux/minimumOrfSize.js +24 -0
- package/src/redux/modalActions.js +3 -0
- package/src/redux/panelsShown.js +273 -0
- package/src/redux/partLengthsToHide.js +23 -0
- package/src/redux/primerLengthsToHide.js +27 -0
- package/src/redux/propertiesTool.js +40 -0
- package/src/redux/readOnly.js +28 -0
- package/src/redux/replacementLayers.js +36 -0
- package/src/redux/restrictionEnzymes.js +52 -0
- package/src/redux/selectedAnnotations.js +89 -0
- package/src/redux/selectedPartTags.js +21 -0
- package/src/redux/selectionLayer.js +46 -0
- package/src/redux/sequenceData/circular.js +19 -0
- package/src/redux/sequenceData/description.js +21 -0
- package/src/redux/sequenceData/features.js +19 -0
- package/src/redux/sequenceData/index.js +81 -0
- package/src/redux/sequenceData/lineageLines.js +11 -0
- package/src/redux/sequenceData/materiallyAvailable.js +19 -0
- package/src/redux/sequenceData/name.js +19 -0
- package/src/redux/sequenceData/parts.js +19 -0
- package/src/redux/sequenceData/primers.js +19 -0
- package/src/redux/sequenceData/sequence.js +12 -0
- package/src/redux/sequenceData/sharedActionCreators.js +0 -0
- package/src/redux/sequenceData/translations.js +20 -0
- package/src/redux/sequenceData/upsertDeleteActionGenerator.js +31 -0
- package/src/redux/sequenceDataHistory.js +43 -0
- package/src/redux/showGCContent.js +23 -0
- package/src/redux/toolBar.js +25 -0
- package/src/redux/uppercaseSequenceMapFont.js +25 -0
- package/src/redux/useAdditionalOrfStartCodons.js +24 -0
- package/src/redux/utils/addDashesForMatchStartAndEndForTracks/index.js +71 -0
- package/src/redux/utils/addMetaToActionCreators.js +12 -0
- package/src/redux/utils/createMergedDefaultStateReducer.js +30 -0
- package/src/redux/utils/createMetaAction.js +12 -0
- package/src/redux/versionHistory.js +27 -0
- package/src/selectors/annotationLabelVisibility.js +2 -0
- package/src/selectors/annotationSearchSelector.js +24 -0
- package/src/selectors/cdsFeaturesSelector.js +9 -0
- package/src/selectors/circularSelector.js +4 -0
- package/src/selectors/cutsiteLabelColorSelector.js +6 -0
- package/src/selectors/cutsitesByRangeSelector.js +5 -0
- package/src/selectors/cutsitesSelector.js +61 -0
- package/src/selectors/editorSelector.js +2 -0
- package/src/selectors/featuresSelector.js +8 -0
- package/src/selectors/filteredCutsitesSelector.js +137 -0
- package/src/selectors/filteredFeaturesSelector.js +32 -0
- package/src/selectors/filteredPartsSelector.js +57 -0
- package/src/selectors/filteredPrimersSelector.js +27 -0
- package/src/selectors/filteredRestrictionEnzymesSelector.js +1 -0
- package/src/selectors/getAdditionalEnzymesSelector.js +46 -0
- package/src/selectors/index.js +41 -0
- package/src/selectors/isEnzymeFilterAndSelector.js +1 -0
- package/src/selectors/minimumOrfSizeSelector.js +2 -0
- package/src/selectors/orfsSelector.js +15 -0
- package/src/selectors/partsSelector.js +8 -0
- package/src/selectors/primersSelector.js +8 -0
- package/src/selectors/restrictionEnzymesSelector.js +34 -0
- package/src/selectors/searchLayersSelector.js +71 -0
- package/src/selectors/selectedAnnotationsSelector.js +1 -0
- package/src/selectors/selectedCutsitesSelector.js +21 -0
- package/src/selectors/sequenceDataSelector.js +2 -0
- package/src/selectors/sequenceLengthSelector.js +5 -0
- package/src/selectors/sequenceSelector.js +4 -0
- package/src/selectors/tagsToBoldSelector.js +2 -0
- package/src/selectors/translationSearchMatchesSelector.js +14 -0
- package/src/selectors/translationsRawSelector.js +8 -0
- package/src/selectors/translationsSelector.js +137 -0
- package/src/style.css +82 -0
- package/src/updateEditor.js +198 -0
- package/src/utils/PassThrough.js +3 -0
- package/src/utils/addWrappedAddons.js +20 -0
- package/src/utils/annotationTypes.js +37 -0
- package/src/utils/arrayUtils.js +19 -0
- package/src/utils/calculateTickMarkPositionsForGivenRange.js +47 -0
- package/src/utils/cleanSequenceData_DEPRECATED/arrayToObjWithIds.js +17 -0
- package/src/utils/combineReducersDontIgnoreKeys.js +12 -0
- package/src/utils/commandUtils.js +18 -0
- package/src/utils/editorUtils.js +223 -0
- package/src/utils/getAnnotationClassnames.js +12 -0
- package/src/utils/getAnnotationNameAndStartStopString.js +61 -0
- package/src/utils/getVisibleStartEnd.js +7 -0
- package/src/utils/massageTickSpacing.js +19 -0
- package/src/utils/onlyUpdateForKeysDeep.js +31 -0
- package/src/utils/prepareRowData.js +64 -0
- package/src/utils/proteinUtils.js +3 -0
- package/src/utils/pureNoFunc.js +18 -0
- package/src/utils/selectionLayer.js +25 -0
- package/src/utils/shouldRerender.js +27 -0
- package/src/utils/showFileDialog.js +26 -0
- package/src/utils/updateLabelsForInViewFeatures.js +55 -0
- package/src/utils/updateLabelsForInViewFeaturesCircView.js +41 -0
- package/src/utils/useAAColorType.js +8 -0
- package/src/utils/useAnnotationLimits.js +42 -0
- package/src/utils/useChromatogramPrefs.js +31 -0
- package/src/utils/useLadders.js +6 -0
- package/src/utils/useMeltingTemp.js +7 -0
- package/src/utils/useTmType.js +10 -0
- package/src/withEditorInteractions/Keyboard.js +86 -0
- package/src/withEditorInteractions/clickAndDragUtils.js +576 -0
- package/src/withEditorInteractions/createSequenceInputPopup.js +296 -0
- package/src/withEditorInteractions/createSequenceInputPopupStyle.css +85 -0
- package/src/withEditorInteractions/getBpsPerRow.js +19 -0
- package/src/withEditorInteractions/index.js +1252 -0
- package/src/withEditorInteractions/isElementInViewport.js +29 -0
- package/src/withEditorInteractions/moveCaret.js +58 -0
- package/src/withEditorProps/index.js +1010 -0
- package/index.mjs +0 -193228
| @@ -0,0 +1,930 @@ | |
| 1 | 
            +
            import { ZoomCircularViewSlider } from "./ZoomCircularViewSlider";
         | 
| 2 | 
            +
            import VeWarning from "../helperComponents/VeWarning";
         | 
| 3 | 
            +
            import Labels from "./Labels";
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| 4 | 
            +
            import SelectionLayer from "./SelectionLayer";
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| 5 | 
            +
            import Caret from "./Caret";
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| 6 | 
            +
            import Axis from "./Axis";
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| 7 | 
            +
            import Orf from "./Orf";
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| 8 | 
            +
            import Feature from "./Feature";
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| 9 | 
            +
            import Primer from "./Primer";
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| 10 | 
            +
            import Cutsite from "./Cutsite";
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| 11 | 
            +
            import sortBy from "lodash/sortBy";
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            +
            import {
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| 13 | 
            +
              normalizePositionByRangeLength,
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            +
              getPositionFromAngle,
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            +
              getRangeLength,
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            +
              getOverlapsOfPotentiallyCircularRanges,
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            +
              isRangeOrPositionWithinRange,
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            +
              getMiddleOfRange,
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| 19 | 
            +
              getSequenceWithinRange,
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            +
              trimRangeByAnotherRange
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| 21 | 
            +
            } from "@teselagen/range-utils";
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| 22 | 
            +
            import React, { useEffect, useRef, useState } from "react";
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| 23 | 
            +
            import Draggable from "react-draggable";
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| 24 | 
            +
            import withEditorInteractions from "../withEditorInteractions";
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| 25 | 
            +
            import drawAnnotations from "./drawAnnotations";
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| 26 | 
            +
            import "./style.css";
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| 27 | 
            +
            import draggableClassnames from "../constants/draggableClassnames";
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| 28 | 
            +
            import { getOrfColor } from "../constants/orfFrameToColorMap";
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| 29 | 
            +
            import { getSingular } from "../utils/annotationTypes";
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            +
            import { upperFirst, map, flatMap, noop } from "lodash";
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            +
             | 
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            +
            import useAnnotationLimits from "../utils/useAnnotationLimits";
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            +
            import {
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            +
              getClientX,
         | 
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            +
              getClientY,
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| 36 | 
            +
              getParedDownWarning,
         | 
| 37 | 
            +
              pareDownAnnotations
         | 
| 38 | 
            +
            } from "../utils/editorUtils";
         | 
| 39 | 
            +
            import { getAllSelectionLayers } from "../utils/selectionLayer";
         | 
| 40 | 
            +
            import classNames from "classnames";
         | 
| 41 | 
            +
            import calculateTickMarkPositionsForGivenRange from "../utils/calculateTickMarkPositionsForGivenRange";
         | 
| 42 | 
            +
            import { RotateCircularViewSlider } from "./RotateCircularViewSlider";
         | 
| 43 | 
            +
            import { AxisNumbers } from "./AxisNumbers";
         | 
| 44 | 
            +
            import { positionCutsites } from "./positionCutsites";
         | 
| 45 | 
            +
            import { usePinch } from "@use-gesture/react";
         | 
| 46 | 
            +
            import { CircularZoomMinimap } from "./CircularZoomMinimap";
         | 
| 47 | 
            +
            import { normalizeAngleRange } from "./normalizeAngleRange";
         | 
| 48 | 
            +
            import { CircularDnaSequence } from "./CircularDnaSequence";
         | 
| 49 | 
            +
            import { VeTopRightContainer } from "./VeTopRightContainer";
         | 
| 50 | 
            +
            import { normalizeAngle } from "./normalizeAngle";
         | 
| 51 | 
            +
            import {
         | 
| 52 | 
            +
              editorDragged,
         | 
| 53 | 
            +
              editorDragStarted,
         | 
| 54 | 
            +
              editorDragStopped
         | 
| 55 | 
            +
            } from "../withEditorInteractions/clickAndDragUtils";
         | 
| 56 | 
            +
            // import { updateLabelsForInViewFeaturesCircView } from "../utils/updateLabelsForInViewFeaturesCircView";
         | 
| 57 | 
            +
             | 
| 58 | 
            +
            const BASE_RADIUS = 70;
         | 
| 59 | 
            +
             | 
| 60 | 
            +
            function getNearestCursorPositionToMouseEvent(
         | 
| 61 | 
            +
              event,
         | 
| 62 | 
            +
              {
         | 
| 63 | 
            +
                updateSelectionOrCaret,
         | 
| 64 | 
            +
                caretPosition,
         | 
| 65 | 
            +
                selectionLayer,
         | 
| 66 | 
            +
                caretPositionUpdate,
         | 
| 67 | 
            +
                selectionLayerUpdate,
         | 
| 68 | 
            +
                sequenceData,
         | 
| 69 | 
            +
                sequenceLength,
         | 
| 70 | 
            +
                circRef,
         | 
| 71 | 
            +
                rotationRadians
         | 
| 72 | 
            +
              },
         | 
| 73 | 
            +
              callback
         | 
| 74 | 
            +
            ) {
         | 
| 75 | 
            +
              const clientX = getClientX(event);
         | 
| 76 | 
            +
              const clientY = getClientY(event);
         | 
| 77 | 
            +
              if (!clientX) {
         | 
| 78 | 
            +
                return;
         | 
| 79 | 
            +
              }
         | 
| 80 | 
            +
              const boundingRect = circRef.current.getBoundingClientRect();
         | 
| 81 | 
            +
              //get relative click positions
         | 
| 82 | 
            +
              const clickX = clientX - boundingRect.left - boundingRect.width / 2;
         | 
| 83 | 
            +
              const clickY = clientY - boundingRect.top - boundingRect.height / 2;
         | 
| 84 | 
            +
             | 
| 85 | 
            +
              //get angle
         | 
| 86 | 
            +
              let angle = Math.atan2(clickY, clickX) + Math.PI / 2 - rotationRadians;
         | 
| 87 | 
            +
              if (angle < 0) angle += Math.PI * 2; //normalize the angle if necessary
         | 
| 88 | 
            +
              let nearestCaretPos =
         | 
| 89 | 
            +
                sequenceLength === 0
         | 
| 90 | 
            +
                  ? 0
         | 
| 91 | 
            +
                  : normalizePositionByRangeLength(
         | 
| 92 | 
            +
                      getPositionFromAngle(angle, sequenceLength, true),
         | 
| 93 | 
            +
                      sequenceLength
         | 
| 94 | 
            +
                    ); //true because we're in between positions
         | 
| 95 | 
            +
              if (sequenceData && sequenceData.isProtein) {
         | 
| 96 | 
            +
                nearestCaretPos = Math.round(nearestCaretPos / 3) * 3;
         | 
| 97 | 
            +
              }
         | 
| 98 | 
            +
             | 
| 99 | 
            +
              callback({
         | 
| 100 | 
            +
                updateSelectionOrCaret,
         | 
| 101 | 
            +
                caretPosition,
         | 
| 102 | 
            +
                selectionLayer,
         | 
| 103 | 
            +
                caretPositionUpdate,
         | 
| 104 | 
            +
                selectionLayerUpdate,
         | 
| 105 | 
            +
                sequenceLength,
         | 
| 106 | 
            +
                event,
         | 
| 107 | 
            +
                doNotWrapOrigin: !(sequenceData && sequenceData.circular),
         | 
| 108 | 
            +
                className: event.target.parentNode.className.animVal,
         | 
| 109 | 
            +
                shiftHeld: event.shiftKey,
         | 
| 110 | 
            +
                nearestCaretPos,
         | 
| 111 | 
            +
                selectionStartGrabbed: event.target.parentNode.classList.contains(
         | 
| 112 | 
            +
                  draggableClassnames.selectionStart
         | 
| 113 | 
            +
                ),
         | 
| 114 | 
            +
                selectionEndGrabbed: event.target.parentNode.classList.contains(
         | 
| 115 | 
            +
                  draggableClassnames.selectionEnd
         | 
| 116 | 
            +
                )
         | 
| 117 | 
            +
              });
         | 
| 118 | 
            +
            }
         | 
| 119 | 
            +
             | 
| 120 | 
            +
            export function CircularView(props) {
         | 
| 121 | 
            +
              const [limits] = useAnnotationLimits();
         | 
| 122 | 
            +
              let [rotationRadians, setRotationRadians] = useState(0);
         | 
| 123 | 
            +
              let [_zoomLevel, setZoomLevel] = useState(1);
         | 
| 124 | 
            +
             | 
| 125 | 
            +
              if (props.circ_zoomLevel !== undefined) {
         | 
| 126 | 
            +
                //override from the editor to not lose the state when the Circular View component isn't rendered
         | 
| 127 | 
            +
                rotationRadians = props.circ_rotationRadians;
         | 
| 128 | 
            +
                setRotationRadians = props.circ_setRotationRadians;
         | 
| 129 | 
            +
                _zoomLevel = props.circ_zoomLevel;
         | 
| 130 | 
            +
                setZoomLevel = props.circ_setZoomLevel;
         | 
| 131 | 
            +
              }
         | 
| 132 | 
            +
              const { sequenceData = {}, smallSlider } = props;
         | 
| 133 | 
            +
              const { sequence = "atgc", circular } = sequenceData;
         | 
| 134 | 
            +
             | 
| 135 | 
            +
              const sequenceLength = sequenceData.noSequence
         | 
| 136 | 
            +
                ? sequenceData.size
         | 
| 137 | 
            +
                : sequenceData.sequence.length;
         | 
| 138 | 
            +
             | 
| 139 | 
            +
              const hasZoomableLength = sequenceLength >= 50;
         | 
| 140 | 
            +
              const hasRotateableLength = sequenceLength >= 10;
         | 
| 141 | 
            +
              if (!hasZoomableLength) _zoomLevel = 1;
         | 
| 142 | 
            +
              if (!hasRotateableLength) rotationRadians = 0;
         | 
| 143 | 
            +
              const circRef = useRef();
         | 
| 144 | 
            +
              const rotateHelper = useRef({});
         | 
| 145 | 
            +
              const zoomHelper = useRef({});
         | 
| 146 | 
            +
              useEffect(() => {
         | 
| 147 | 
            +
                rotateHelper.current.triggerChange &&
         | 
| 148 | 
            +
                  rotateHelper.current.triggerChange(({ changeValue }) => {
         | 
| 149 | 
            +
                    changeValue(
         | 
| 150 | 
            +
                      (normalizeAngle(Math.PI * 2 - rotationRadians) / Math.PI) * 180
         | 
| 151 | 
            +
                    );
         | 
| 152 | 
            +
                  });
         | 
| 153 | 
            +
                // eslint-disable-next-line react-hooks/exhaustive-deps
         | 
| 154 | 
            +
              }, []);
         | 
| 155 | 
            +
              let zoomLevel = _zoomLevel;
         | 
| 156 | 
            +
             | 
| 157 | 
            +
              let smallZoom = 1;
         | 
| 158 | 
            +
              if (_zoomLevel < 1) {
         | 
| 159 | 
            +
                smallZoom = _zoomLevel;
         | 
| 160 | 
            +
                zoomLevel = 1;
         | 
| 161 | 
            +
              }
         | 
| 162 | 
            +
             | 
| 163 | 
            +
              const {
         | 
| 164 | 
            +
                //set defaults for all of these vars
         | 
| 165 | 
            +
                width = 400,
         | 
| 166 | 
            +
                height = 400,
         | 
| 167 | 
            +
                noRedux,
         | 
| 168 | 
            +
                readOnly,
         | 
| 169 | 
            +
                hideName = false,
         | 
| 170 | 
            +
                editorName,
         | 
| 171 | 
            +
                smartCircViewLabelRender,
         | 
| 172 | 
            +
                showCicularViewInternalLabels,
         | 
| 173 | 
            +
                withRotateCircularView: _withRotateCircularView,
         | 
| 174 | 
            +
                withZoomCircularView,
         | 
| 175 | 
            +
                selectionLayer = { start: -1, end: -1 },
         | 
| 176 | 
            +
                annotationHeight = 15,
         | 
| 177 | 
            +
                spaceBetweenAnnotations = 2,
         | 
| 178 | 
            +
                annotationVisibility = {},
         | 
| 179 | 
            +
                annotationLabelVisibility = {},
         | 
| 180 | 
            +
                caretPosition = -1,
         | 
| 181 | 
            +
                editorClicked = noop,
         | 
| 182 | 
            +
                backgroundRightClicked = noop,
         | 
| 183 | 
            +
                searchLayers = [],
         | 
| 184 | 
            +
                additionalSelectionLayers = [],
         | 
| 185 | 
            +
                maxAnnotationsToDisplay,
         | 
| 186 | 
            +
                searchLayerRightClicked = noop,
         | 
| 187 | 
            +
                selectionLayerRightClicked = noop,
         | 
| 188 | 
            +
                searchLayerClicked = noop,
         | 
| 189 | 
            +
                instantiated,
         | 
| 190 | 
            +
                noWarnings,
         | 
| 191 | 
            +
                labelLineIntensity,
         | 
| 192 | 
            +
                fontHeightMultiplier,
         | 
| 193 | 
            +
                hoveredId,
         | 
| 194 | 
            +
                labelSize,
         | 
| 195 | 
            +
                nameFontSizeCircularView = 14,
         | 
| 196 | 
            +
                fullScreen
         | 
| 197 | 
            +
              } = props;
         | 
| 198 | 
            +
              const withRotateCircularView =
         | 
| 199 | 
            +
                _withRotateCircularView || withZoomCircularView; //if we're showing zoom then we MUST show rotation as well
         | 
| 200 | 
            +
             | 
| 201 | 
            +
              const sequenceName = hideName ? "" : sequenceData.name || "";
         | 
| 202 | 
            +
              let annotationsSvgs = [];
         | 
| 203 | 
            +
              let labels = {};
         | 
| 204 | 
            +
             | 
| 205 | 
            +
              const { isProtein } = sequenceData;
         | 
| 206 | 
            +
              const maxZoomLevel = Math.max(5, Math.floor(sequenceLength / 100));
         | 
| 207 | 
            +
             | 
| 208 | 
            +
              const svgWidth = Math.max(Number(width) || 300);
         | 
| 209 | 
            +
              const svgHeight = Math.max(Number(height) || 300);
         | 
| 210 | 
            +
              const percentOfCircle = ((1 / zoomLevel) * Math.min(svgWidth, 800)) / 800;
         | 
| 211 | 
            +
              const isZoomedIn = zoomLevel !== 1;
         | 
| 212 | 
            +
              let radius = BASE_RADIUS;
         | 
| 213 | 
            +
              const rotation = 2 * Math.PI - rotationRadians; //get radians
         | 
| 214 | 
            +
             | 
| 215 | 
            +
              let rangeToShowLength = sequenceLength;
         | 
| 216 | 
            +
              let rangeToShow = { start: 0, end: Math.max(sequenceLength - 1, 0) };
         | 
| 217 | 
            +
              let visibleAngleRange;
         | 
| 218 | 
            +
              if (isZoomedIn) {
         | 
| 219 | 
            +
                const visibleAngle = Math.PI * percentOfCircle;
         | 
| 220 | 
            +
                radius = Math.max(BASE_RADIUS, svgWidth / Math.sin(visibleAngle / 2) / 2);
         | 
| 221 | 
            +
             | 
| 222 | 
            +
                visibleAngleRange = normalizeAngleRange({
         | 
| 223 | 
            +
                  start: rotation - visibleAngle / 2,
         | 
| 224 | 
            +
                  end: rotation + visibleAngle / 2
         | 
| 225 | 
            +
                });
         | 
| 226 | 
            +
                const rangeToShowStart = getPositionFromAngle(
         | 
| 227 | 
            +
                  visibleAngleRange.start,
         | 
| 228 | 
            +
                  sequenceLength
         | 
| 229 | 
            +
                );
         | 
| 230 | 
            +
                const rangeToShowEnd = getPositionFromAngle(
         | 
| 231 | 
            +
                  visibleAngleRange.end,
         | 
| 232 | 
            +
                  sequenceLength
         | 
| 233 | 
            +
                );
         | 
| 234 | 
            +
                rangeToShow = {
         | 
| 235 | 
            +
                  start: normalizePositionByRangeLength(rangeToShowStart, sequenceLength),
         | 
| 236 | 
            +
                  end: normalizePositionByRangeLength(rangeToShowEnd, sequenceLength)
         | 
| 237 | 
            +
                };
         | 
| 238 | 
            +
             | 
| 239 | 
            +
                rangeToShowLength = getRangeLength(rangeToShow, sequenceLength);
         | 
| 240 | 
            +
              }
         | 
| 241 | 
            +
              const innerRadius = radius - 10;
         | 
| 242 | 
            +
              const initialRadius = radius;
         | 
| 243 | 
            +
              const showSeq = isZoomedIn && rangeToShowLength < 140;
         | 
| 244 | 
            +
              const showSeqText = rangeToShowLength < 80;
         | 
| 245 | 
            +
             | 
| 246 | 
            +
              //RENDERING CONCEPTS:
         | 
| 247 | 
            +
              //-"Circular" annotations get a radius, and a curvature based on their radius:
         | 
| 248 | 
            +
              //<CircularFeature>
         | 
| 249 | 
            +
              //-Then we rotate the annotations as necessary (and optionally flip them):
         | 
| 250 | 
            +
              //<PositionAnnotationOnCircle>
         | 
| 251 | 
            +
             | 
| 252 | 
            +
              const layersToDraw = [
         | 
| 253 | 
            +
                { zIndex: 10, layerName: "sequenceChars" },
         | 
| 254 | 
            +
                {
         | 
| 255 | 
            +
                  zIndex: 20,
         | 
| 256 | 
            +
                  layerName: "features",
         | 
| 257 | 
            +
                  isAnnotation: true,
         | 
| 258 | 
            +
                  // spaceBefore: 10,
         | 
| 259 | 
            +
                  spaceAfter: 5
         | 
| 260 | 
            +
                },
         | 
| 261 | 
            +
             | 
| 262 | 
            +
                ...(annotationVisibility.axis
         | 
| 263 | 
            +
                  ? [
         | 
| 264 | 
            +
                      {
         | 
| 265 | 
            +
                        layerName: "axisNumbers",
         | 
| 266 | 
            +
                        annotationType: "axisNumbers",
         | 
| 267 | 
            +
                        Annotation: AxisNumbers,
         | 
| 268 | 
            +
                        isAnnotation: true,
         | 
| 269 | 
            +
                        noTitle: true,
         | 
| 270 | 
            +
                        noHover: true,
         | 
| 271 | 
            +
                        annotations: calculateTickMarkPositionsForGivenRange({
         | 
| 272 | 
            +
                          increaseOffset: true,
         | 
| 273 | 
            +
                          range: rangeToShow,
         | 
| 274 | 
            +
                          tickSpacing:
         | 
| 275 | 
            +
                            rangeToShowLength < 10
         | 
| 276 | 
            +
                              ? 2
         | 
| 277 | 
            +
                              : rangeToShowLength < 50
         | 
| 278 | 
            +
                              ? Math.ceil(rangeToShowLength / 25) * 5
         | 
| 279 | 
            +
                              : Math.ceil(rangeToShowLength / 100) * 10,
         | 
| 280 | 
            +
                          sequenceLength,
         | 
| 281 | 
            +
                          isProtein
         | 
| 282 | 
            +
                        }).map((pos) => {
         | 
| 283 | 
            +
                          return {
         | 
| 284 | 
            +
                            name: "Tick Mark",
         | 
| 285 | 
            +
                            tickPosition: pos,
         | 
| 286 | 
            +
                            start: pos,
         | 
| 287 | 
            +
                            end: pos
         | 
| 288 | 
            +
                          };
         | 
| 289 | 
            +
                        }),
         | 
| 290 | 
            +
                        annotationProps: {
         | 
| 291 | 
            +
                          hideTicks: !annotationVisibility.axis,
         | 
| 292 | 
            +
                          hideNumbers: !annotationVisibility.axisNumbers
         | 
| 293 | 
            +
                        },
         | 
| 294 | 
            +
                        useCenter: true,
         | 
| 295 | 
            +
             | 
| 296 | 
            +
                        passAnnotation: true,
         | 
| 297 | 
            +
                        allOnSameLevel: true,
         | 
| 298 | 
            +
                        addHeight: true,
         | 
| 299 | 
            +
                        alwaysShow: true,
         | 
| 300 | 
            +
                        showLabels: false,
         | 
| 301 | 
            +
                        spaceBefore: 0,
         | 
| 302 | 
            +
                        spaceAfter: 0
         | 
| 303 | 
            +
                      },
         | 
| 304 | 
            +
                      {
         | 
| 305 | 
            +
                        zIndex: 0,
         | 
| 306 | 
            +
                        layerName: "axis",
         | 
| 307 | 
            +
                        Annotation: Axis,
         | 
| 308 | 
            +
                        spaceBefore: 10,
         | 
| 309 | 
            +
                        spaceAfter: 5
         | 
| 310 | 
            +
                      }
         | 
| 311 | 
            +
                    ]
         | 
| 312 | 
            +
                  : []),
         | 
| 313 | 
            +
                {
         | 
| 314 | 
            +
                  zIndex: 10,
         | 
| 315 | 
            +
                  layerName: "cutsites",
         | 
| 316 | 
            +
                  fontStyle: "italic",
         | 
| 317 | 
            +
                  Annotation: Cutsite,
         | 
| 318 | 
            +
                  hideAnnotation: showSeqText,
         | 
| 319 | 
            +
                  useStartAngle: true,
         | 
| 320 | 
            +
                  allOnSameLevel: true,
         | 
| 321 | 
            +
                  noHeight: true,
         | 
| 322 | 
            +
                  addHeight: false,
         | 
| 323 | 
            +
                  positionBy: positionCutsites,
         | 
| 324 | 
            +
                  isAnnotation: true
         | 
| 325 | 
            +
                },
         | 
| 326 | 
            +
                ...(showSeq && annotationVisibility.sequence
         | 
| 327 | 
            +
                  ? [
         | 
| 328 | 
            +
                      {
         | 
| 329 | 
            +
                        layerName: "dnaSequences",
         | 
| 330 | 
            +
                        annotationType: "dnaSequences",
         | 
| 331 | 
            +
                        noTitle: true,
         | 
| 332 | 
            +
                        Annotation: CircularDnaSequence,
         | 
| 333 | 
            +
                        isAnnotation: true,
         | 
| 334 | 
            +
                        annotationProps: {
         | 
| 335 | 
            +
                          showReverseSequence: annotationVisibility.reverseSequence,
         | 
| 336 | 
            +
                          showDnaColors: annotationVisibility.dnaColors,
         | 
| 337 | 
            +
                          showSeqText
         | 
| 338 | 
            +
                        },
         | 
| 339 | 
            +
                        noHover: true,
         | 
| 340 | 
            +
                        annotations: getSequenceWithinRange(rangeToShow, sequence)
         | 
| 341 | 
            +
                          .split("")
         | 
| 342 | 
            +
                          .map((letter, i) => {
         | 
| 343 | 
            +
                            const pos = rangeToShow.start + i;
         | 
| 344 | 
            +
                            return {
         | 
| 345 | 
            +
                              className: `ve-dna-letter-${pos}`,
         | 
| 346 | 
            +
                              start: pos,
         | 
| 347 | 
            +
                              end: pos,
         | 
| 348 | 
            +
                              letter
         | 
| 349 | 
            +
                            };
         | 
| 350 | 
            +
                          }),
         | 
| 351 | 
            +
                        useCenter: true,
         | 
| 352 | 
            +
                        passAnnotation: true,
         | 
| 353 | 
            +
                        allOnSameLevel: true,
         | 
| 354 | 
            +
                        addHeight: true,
         | 
| 355 | 
            +
                        alwaysShow: true,
         | 
| 356 | 
            +
                        showLabels: false,
         | 
| 357 | 
            +
                        spaceBefore: 5,
         | 
| 358 | 
            +
                        spaceAfter: annotationVisibility.reverseSequence ? 20 : 5
         | 
| 359 | 
            +
                      }
         | 
| 360 | 
            +
                    ]
         | 
| 361 | 
            +
                  : []),
         | 
| 362 | 
            +
                {
         | 
| 363 | 
            +
                  zIndex: 15,
         | 
| 364 | 
            +
                  alwaysShow: true,
         | 
| 365 | 
            +
                  layerName: "caret",
         | 
| 366 | 
            +
                  Annotation: drawCaret
         | 
| 367 | 
            +
                },
         | 
| 368 | 
            +
             | 
| 369 | 
            +
                {
         | 
| 370 | 
            +
                  zIndex: 10,
         | 
| 371 | 
            +
                  alwaysShow: true,
         | 
| 372 | 
            +
                  layerName: "selectionLayer",
         | 
| 373 | 
            +
                  Annotation: drawSelectionLayer,
         | 
| 374 | 
            +
                  spaceAfter: 10
         | 
| 375 | 
            +
                },
         | 
| 376 | 
            +
                {
         | 
| 377 | 
            +
                  zIndex: 20,
         | 
| 378 | 
            +
                  layerName: "replacementLayers",
         | 
| 379 | 
            +
                  isAnnotation: true,
         | 
| 380 | 
            +
                  spaceAfter: 20
         | 
| 381 | 
            +
                },
         | 
| 382 | 
            +
                {
         | 
| 383 | 
            +
                  zIndex: 20,
         | 
| 384 | 
            +
                  layerName: "deletionLayers",
         | 
| 385 | 
            +
                  isAnnotation: true,
         | 
| 386 | 
            +
                  spaceAfter: 20
         | 
| 387 | 
            +
                },
         | 
| 388 | 
            +
             | 
| 389 | 
            +
                {
         | 
| 390 | 
            +
                  zIndex: 20,
         | 
| 391 | 
            +
                  Annotation: Orf,
         | 
| 392 | 
            +
                  showLabels: false,
         | 
| 393 | 
            +
                  getColor: getOrfColor,
         | 
| 394 | 
            +
                  layerName: "orfs",
         | 
| 395 | 
            +
                  isAnnotation: true,
         | 
| 396 | 
            +
                  spaceBefore: 10
         | 
| 397 | 
            +
                },
         | 
| 398 | 
            +
                {
         | 
| 399 | 
            +
                  spaceBefore: 10,
         | 
| 400 | 
            +
                  spaceAfter: 5,
         | 
| 401 | 
            +
                  zIndex: 20,
         | 
| 402 | 
            +
                  Annotation: Primer,
         | 
| 403 | 
            +
                  isAnnotation: true,
         | 
| 404 | 
            +
                  layerName: "primers"
         | 
| 405 | 
            +
                },
         | 
| 406 | 
            +
                {
         | 
| 407 | 
            +
                  zIndex: 20,
         | 
| 408 | 
            +
                  layerName: "parts",
         | 
| 409 | 
            +
                  isAnnotation: true,
         | 
| 410 | 
            +
                  spaceBefore: 10,
         | 
| 411 | 
            +
                  spaceAfter: 5
         | 
| 412 | 
            +
                },
         | 
| 413 | 
            +
                {
         | 
| 414 | 
            +
                  zIndex: 20,
         | 
| 415 | 
            +
                  layerName: "lineageAnnotations",
         | 
| 416 | 
            +
                  isAnnotation: true,
         | 
| 417 | 
            +
                  spaceBefore: 10,
         | 
| 418 | 
            +
                  spaceAfter: 5
         | 
| 419 | 
            +
                },
         | 
| 420 | 
            +
                {
         | 
| 421 | 
            +
                  zIndex: 20,
         | 
| 422 | 
            +
                  layerName: "assemblyPieces",
         | 
| 423 | 
            +
                  isAnnotation: true,
         | 
| 424 | 
            +
                  spaceBefore: 10,
         | 
| 425 | 
            +
                  spaceAfter: 5
         | 
| 426 | 
            +
                },
         | 
| 427 | 
            +
                {
         | 
| 428 | 
            +
                  zIndex: 20,
         | 
| 429 | 
            +
                  layerName: "warnings",
         | 
| 430 | 
            +
                  isAnnotation: true,
         | 
| 431 | 
            +
                  spaceBefore: 10,
         | 
| 432 | 
            +
                  spaceAfter: 5
         | 
| 433 | 
            +
                },
         | 
| 434 | 
            +
                {
         | 
| 435 | 
            +
                  zIndex: 30,
         | 
| 436 | 
            +
                  alwaysShow: true,
         | 
| 437 | 
            +
                  layerName: "labels",
         | 
| 438 | 
            +
                  Annotation: Labels,
         | 
| 439 | 
            +
                  circularViewWidthVsHeightRatio: width / height,
         | 
| 440 | 
            +
                  passLabels: true,
         | 
| 441 | 
            +
                  labelLineIntensity: labelLineIntensity,
         | 
| 442 | 
            +
                  labelSize: labelSize,
         | 
| 443 | 
            +
                  fontHeightMultiplier: fontHeightMultiplier,
         | 
| 444 | 
            +
                  textScalingFactor: 700 / Math.min(width, height)
         | 
| 445 | 
            +
                }
         | 
| 446 | 
            +
              ];
         | 
| 447 | 
            +
              const paredDownMessages = [];
         | 
| 448 | 
            +
              const output = layersToDraw
         | 
| 449 | 
            +
                .map((layer) => {
         | 
| 450 | 
            +
                  const {
         | 
| 451 | 
            +
                    layerName,
         | 
| 452 | 
            +
                    maxToDisplay,
         | 
| 453 | 
            +
                    Comp,
         | 
| 454 | 
            +
                    Annotation,
         | 
| 455 | 
            +
                    fontStyle,
         | 
| 456 | 
            +
                    alwaysShow,
         | 
| 457 | 
            +
                    isAnnotation,
         | 
| 458 | 
            +
                    spaceBefore = 0,
         | 
| 459 | 
            +
                    spaceAfter = 0,
         | 
| 460 | 
            +
                    zIndex,
         | 
| 461 | 
            +
                    passLabels,
         | 
| 462 | 
            +
                    noTitle,
         | 
| 463 | 
            +
                    ...rest
         | 
| 464 | 
            +
                  } = layer;
         | 
| 465 | 
            +
                  if (!(alwaysShow || annotationVisibility[layerName])) {
         | 
| 466 | 
            +
                    return null;
         | 
| 467 | 
            +
                  }
         | 
| 468 | 
            +
                  //DRAW FEATURES
         | 
| 469 | 
            +
                  let comp;
         | 
| 470 | 
            +
                  let results;
         | 
| 471 | 
            +
             | 
| 472 | 
            +
                  const singularName = getSingular(layerName);
         | 
| 473 | 
            +
                  const nameUpper = upperFirst(layerName);
         | 
| 474 | 
            +
                  radius += spaceBefore;
         | 
| 475 | 
            +
             | 
| 476 | 
            +
                  const sharedProps = {
         | 
| 477 | 
            +
                    radius,
         | 
| 478 | 
            +
                    innerRadius: BASE_RADIUS,
         | 
| 479 | 
            +
                    outerRadius: radius,
         | 
| 480 | 
            +
                    noRedux,
         | 
| 481 | 
            +
                    isProtein,
         | 
| 482 | 
            +
                    smartCircViewLabelRender,
         | 
| 483 | 
            +
                    extraSideSpace: Math.max(0, width - height),
         | 
| 484 | 
            +
                    onClick: props[singularName + "Clicked"],
         | 
| 485 | 
            +
                    onDoubleClick: props[singularName + "DoubleClicked"],
         | 
| 486 | 
            +
                    onRightClicked: props[singularName + "RightClicked"],
         | 
| 487 | 
            +
                    sequenceLength,
         | 
| 488 | 
            +
                    editorName,
         | 
| 489 | 
            +
                    showCicularViewInternalLabels,
         | 
| 490 | 
            +
                    ...rest
         | 
| 491 | 
            +
                  };
         | 
| 492 | 
            +
                  if (isAnnotation) {
         | 
| 493 | 
            +
                    //we're drawing features/cutsites/primers/orfs/etc (something that lives on the seqData)
         | 
| 494 | 
            +
                    if (!map(sequenceData[layerName]).length && !alwaysShow) {
         | 
| 495 | 
            +
                      radius -= spaceBefore;
         | 
| 496 | 
            +
                      return null;
         | 
| 497 | 
            +
                    }
         | 
| 498 | 
            +
             | 
| 499 | 
            +
                    const trimmedAnnotations = flatMap(
         | 
| 500 | 
            +
                      layer.annotations ||
         | 
| 501 | 
            +
                        sequenceData["filtered" + nameUpper] ||
         | 
| 502 | 
            +
                        sequenceData[layerName] ||
         | 
| 503 | 
            +
                        [],
         | 
| 504 | 
            +
                      (range) => {
         | 
| 505 | 
            +
                        const overlapOfRanges = getOverlapsOfPotentiallyCircularRanges(
         | 
| 506 | 
            +
                          range,
         | 
| 507 | 
            +
                          rangeToShow,
         | 
| 508 | 
            +
                          sequenceLength,
         | 
| 509 | 
            +
                          true
         | 
| 510 | 
            +
                        );
         | 
| 511 | 
            +
                        if (!overlapOfRanges || !overlapOfRanges.length) return [];
         | 
| 512 | 
            +
                        return { ...range };
         | 
| 513 | 
            +
                      }
         | 
| 514 | 
            +
                    );
         | 
| 515 | 
            +
             | 
| 516 | 
            +
                    const maxToShow =
         | 
| 517 | 
            +
                      !isZoomedIn &&
         | 
| 518 | 
            +
                      ((maxAnnotationsToDisplay
         | 
| 519 | 
            +
                        ? maxAnnotationsToDisplay[layerName]
         | 
| 520 | 
            +
                        : limits[layerName]) ||
         | 
| 521 | 
            +
                        50);
         | 
| 522 | 
            +
                    const [trimmedAndParedAnns, paredDown] = maxToShow
         | 
| 523 | 
            +
                      ? pareDownAnnotations(trimmedAnnotations, maxToShow)
         | 
| 524 | 
            +
                      : [trimmedAnnotations];
         | 
| 525 | 
            +
             | 
| 526 | 
            +
                    if (paredDown) {
         | 
| 527 | 
            +
                      paredDownMessages.push(
         | 
| 528 | 
            +
                        getParedDownWarning({
         | 
| 529 | 
            +
                          nameUpper,
         | 
| 530 | 
            +
                          maxToShow,
         | 
| 531 | 
            +
                          isAdjustable: !maxAnnotationsToDisplay
         | 
| 532 | 
            +
                        })
         | 
| 533 | 
            +
                      );
         | 
| 534 | 
            +
                    }
         | 
| 535 | 
            +
             | 
| 536 | 
            +
                    results = drawAnnotations({
         | 
| 537 | 
            +
                      readOnly,
         | 
| 538 | 
            +
                      noTitle,
         | 
| 539 | 
            +
                      rotationRadians,
         | 
| 540 | 
            +
                      visibleAngleRange,
         | 
| 541 | 
            +
                      isZoomedIn,
         | 
| 542 | 
            +
                      Annotation: Annotation || Comp || Feature,
         | 
| 543 | 
            +
                      fontStyle: fontStyle,
         | 
| 544 | 
            +
                      hoveredId: hoveredId,
         | 
| 545 | 
            +
                      annotationType: singularName,
         | 
| 546 | 
            +
                      type: singularName,
         | 
| 547 | 
            +
                      reverseAnnotations: true,
         | 
| 548 | 
            +
                      showLabels: !(annotationLabelVisibility[layerName] === false),
         | 
| 549 | 
            +
                      annotations: trimmedAndParedAnns,
         | 
| 550 | 
            +
                      annotationHeight,
         | 
| 551 | 
            +
                      spaceBetweenAnnotations,
         | 
| 552 | 
            +
                      ...sharedProps,
         | 
| 553 | 
            +
                      ...props[singularName + "Options"]
         | 
| 554 | 
            +
                    });
         | 
| 555 | 
            +
                  } else {
         | 
| 556 | 
            +
                    //we're drawing axis/selectionLayer/labels/caret/etc (something that doesn't live on the seqData)
         | 
| 557 | 
            +
                    results = Annotation({
         | 
| 558 | 
            +
                      rotationRadians: rotationRadians,
         | 
| 559 | 
            +
                      ...(passLabels && { labels }),
         | 
| 560 | 
            +
                      ...sharedProps
         | 
| 561 | 
            +
                    });
         | 
| 562 | 
            +
                  }
         | 
| 563 | 
            +
                  if (results) {
         | 
| 564 | 
            +
                    // //update the radius, labels, and svg
         | 
| 565 | 
            +
                    radius += results.height || 0;
         | 
| 566 | 
            +
                    //tnr: we had been storing labels as a keyed-by-id object but that caused parts and features with the same id to override eachother
         | 
| 567 | 
            +
                    labels = [...map(labels), ...map(results.labels || {})];
         | 
| 568 | 
            +
                    comp = results.component === undefined ? results : results.component;
         | 
| 569 | 
            +
                  }
         | 
| 570 | 
            +
                  radius += spaceAfter;
         | 
| 571 | 
            +
                  // console.warn('radius after draw:',JSON.stringify(radius,null,4))
         | 
| 572 | 
            +
                  return {
         | 
| 573 | 
            +
                    result: comp,
         | 
| 574 | 
            +
                    zIndex
         | 
| 575 | 
            +
                  };
         | 
| 576 | 
            +
                })
         | 
| 577 | 
            +
                .filter(function (i) {
         | 
| 578 | 
            +
                  return !!i;
         | 
| 579 | 
            +
                });
         | 
| 580 | 
            +
             | 
| 581 | 
            +
              annotationsSvgs = sortBy(output, "zIndex").reduce(function (arr, { result }) {
         | 
| 582 | 
            +
                return arr.concat(result);
         | 
| 583 | 
            +
              }, []);
         | 
| 584 | 
            +
             | 
| 585 | 
            +
              function drawSelectionLayer() {
         | 
| 586 | 
            +
                //DRAW SELECTION LAYER
         | 
| 587 | 
            +
                return getAllSelectionLayers({
         | 
| 588 | 
            +
                  additionalSelectionLayers,
         | 
| 589 | 
            +
                  searchLayers,
         | 
| 590 | 
            +
                  selectionLayer
         | 
| 591 | 
            +
                })
         | 
| 592 | 
            +
                  .map(function (selectionLayer, index) {
         | 
| 593 | 
            +
                    if (
         | 
| 594 | 
            +
                      selectionLayer.start >= 0 &&
         | 
| 595 | 
            +
                      selectionLayer.end >= 0 &&
         | 
| 596 | 
            +
                      sequenceLength > 0
         | 
| 597 | 
            +
                    ) {
         | 
| 598 | 
            +
                      return (
         | 
| 599 | 
            +
                        <SelectionLayer
         | 
| 600 | 
            +
                          key={index}
         | 
| 601 | 
            +
                          {...{
         | 
| 602 | 
            +
                            index,
         | 
| 603 | 
            +
                            isDraggable: true,
         | 
| 604 | 
            +
                            isProtein,
         | 
| 605 | 
            +
                            key: "veCircularViewSelectionLayer" + index,
         | 
| 606 | 
            +
                            selectionLayer,
         | 
| 607 | 
            +
                            onRightClicked: selectionLayer.isSearchLayer
         | 
| 608 | 
            +
                              ? searchLayerRightClicked
         | 
| 609 | 
            +
                              : selectionLayerRightClicked,
         | 
| 610 | 
            +
                            onClick: selectionLayer.isSearchLayer
         | 
| 611 | 
            +
                              ? searchLayerClicked
         | 
| 612 | 
            +
                              : undefined,
         | 
| 613 | 
            +
                            sequenceLength,
         | 
| 614 | 
            +
                            radius,
         | 
| 615 | 
            +
                            innerRadius
         | 
| 616 | 
            +
                          }}
         | 
| 617 | 
            +
                        />
         | 
| 618 | 
            +
                      );
         | 
| 619 | 
            +
                    } else {
         | 
| 620 | 
            +
                      return null;
         | 
| 621 | 
            +
                    }
         | 
| 622 | 
            +
                  })
         | 
| 623 | 
            +
                  .filter((el) => {
         | 
| 624 | 
            +
                    return !!el;
         | 
| 625 | 
            +
                  });
         | 
| 626 | 
            +
              }
         | 
| 627 | 
            +
             | 
| 628 | 
            +
              function drawCaret() {
         | 
| 629 | 
            +
                //DRAW CARET
         | 
| 630 | 
            +
                if (
         | 
| 631 | 
            +
                  caretPosition !== -1 &&
         | 
| 632 | 
            +
                  selectionLayer.start < 0 &&
         | 
| 633 | 
            +
                  sequenceLength >= 0
         | 
| 634 | 
            +
                ) {
         | 
| 635 | 
            +
                  //only render if there is no selection layer
         | 
| 636 | 
            +
                  return (
         | 
| 637 | 
            +
                    <Caret
         | 
| 638 | 
            +
                      {...{
         | 
| 639 | 
            +
                        caretPosition,
         | 
| 640 | 
            +
                        sequenceLength,
         | 
| 641 | 
            +
                        isProtein,
         | 
| 642 | 
            +
                        innerRadius,
         | 
| 643 | 
            +
                        outerRadius: radius,
         | 
| 644 | 
            +
                        key: "veCircularViewCaret"
         | 
| 645 | 
            +
                      }}
         | 
| 646 | 
            +
                    />
         | 
| 647 | 
            +
                  );
         | 
| 648 | 
            +
                }
         | 
| 649 | 
            +
              }
         | 
| 650 | 
            +
             | 
| 651 | 
            +
              //tnr: Make the radius have a minimum so the empty yellow axis circle doesn't take up the entire screen
         | 
| 652 | 
            +
              if (radius < 150) radius = 150;
         | 
| 653 | 
            +
              const widthToUse = Math.max(Number(width) || 300);
         | 
| 654 | 
            +
              const heightToUse = Math.max(Number(height) || 300);
         | 
| 655 | 
            +
              const bpTitle = isProtein
         | 
| 656 | 
            +
                ? `${Math.floor(sequenceLength / 3)} AAs`
         | 
| 657 | 
            +
                : `${sequenceLength} bps`;
         | 
| 658 | 
            +
              const nameEl = (
         | 
| 659 | 
            +
                <div
         | 
| 660 | 
            +
                  className="veSequenceName"
         | 
| 661 | 
            +
                  style={{
         | 
| 662 | 
            +
                    position: "absolute",
         | 
| 663 | 
            +
                    width: "100%",
         | 
| 664 | 
            +
                    height: "100%",
         | 
| 665 | 
            +
                    pointerEvents: "none",
         | 
| 666 | 
            +
                    display: "flex",
         | 
| 667 | 
            +
                    justifyContent: "center",
         | 
| 668 | 
            +
                    alignItems: isZoomedIn || smallZoom < 1 ? "end" : "center",
         | 
| 669 | 
            +
                    paddingLeft: isZoomedIn || smallZoom < 1 ? 20 : 0,
         | 
| 670 | 
            +
                    paddingRight: isZoomedIn || smallZoom < 1 ? 20 : 0,
         | 
| 671 | 
            +
                    textAlign: "center",
         | 
| 672 | 
            +
             | 
| 673 | 
            +
                    zIndex: 1
         | 
| 674 | 
            +
                  }}
         | 
| 675 | 
            +
                >
         | 
| 676 | 
            +
                  <div style={{ marginBottom: isZoomedIn || smallZoom < 1 ? 80 : 0 }}>
         | 
| 677 | 
            +
                    <div
         | 
| 678 | 
            +
                      title={sequenceName}
         | 
| 679 | 
            +
                      className="veCircularViewTextWrapper"
         | 
| 680 | 
            +
                      style={{
         | 
| 681 | 
            +
                        textAlign: "center",
         | 
| 682 | 
            +
                        display: "-webkit-box",
         | 
| 683 | 
            +
                        WebkitLineClamp: "3",
         | 
| 684 | 
            +
                        WebkitBoxOrient: "vertical",
         | 
| 685 | 
            +
                        overflow: "hidden",
         | 
| 686 | 
            +
                        wordBreak: "break-all",
         | 
| 687 | 
            +
                        textOverflow: "ellipsis",
         | 
| 688 | 
            +
                        width: isZoomedIn || smallZoom < 1 ? undefined : innerRadius,
         | 
| 689 | 
            +
                        maxHeight: innerRadius - 15,
         | 
| 690 | 
            +
                        fontSize: nameFontSizeCircularView
         | 
| 691 | 
            +
                      }}
         | 
| 692 | 
            +
                    >
         | 
| 693 | 
            +
                      {sequenceName}
         | 
| 694 | 
            +
                    </div>
         | 
| 695 | 
            +
                    <span title={bpTitle} style={{ fontSize: 10 }}>
         | 
| 696 | 
            +
                      {bpTitle}
         | 
| 697 | 
            +
                    </span>
         | 
| 698 | 
            +
                  </div>
         | 
| 699 | 
            +
                </div>
         | 
| 700 | 
            +
              );
         | 
| 701 | 
            +
             | 
| 702 | 
            +
              const target = React.useRef();
         | 
| 703 | 
            +
             | 
| 704 | 
            +
              usePinch(
         | 
| 705 | 
            +
                ({ delta: [d], event }) => {
         | 
| 706 | 
            +
                  if (d === 0) return;
         | 
| 707 | 
            +
                  event.stopPropagation();
         | 
| 708 | 
            +
                  zoomHelper.current.triggerChange &&
         | 
| 709 | 
            +
                    zoomHelper.current.triggerChange(({ changeValue, value }) => {
         | 
| 710 | 
            +
                      changeValue(value + d * 5);
         | 
| 711 | 
            +
                    });
         | 
| 712 | 
            +
                },
         | 
| 713 | 
            +
                {
         | 
| 714 | 
            +
                  target,
         | 
| 715 | 
            +
                  from: [zoomLevel]
         | 
| 716 | 
            +
                }
         | 
| 717 | 
            +
              );
         | 
| 718 | 
            +
              const toPass = { ...props, sequenceLength, circRef, rotationRadians };
         | 
| 719 | 
            +
             | 
| 720 | 
            +
              return (
         | 
| 721 | 
            +
                <div
         | 
| 722 | 
            +
                  style={{
         | 
| 723 | 
            +
                    width: widthToUse,
         | 
| 724 | 
            +
                    height: heightToUse,
         | 
| 725 | 
            +
                    position: "relative",
         | 
| 726 | 
            +
                    overflow: "hidden"
         | 
| 727 | 
            +
                  }}
         | 
| 728 | 
            +
                  onWheel={
         | 
| 729 | 
            +
                    withZoomCircularView && hasRotateableLength
         | 
| 730 | 
            +
                      ? (e) => {
         | 
| 731 | 
            +
                          let delta = e.deltaY;
         | 
| 732 | 
            +
                          if (Math.abs(e.deltaY) < Math.abs(e.deltaX)) {
         | 
| 733 | 
            +
                            delta = e.deltaX;
         | 
| 734 | 
            +
                          }
         | 
| 735 | 
            +
                          rotateHelper.current.triggerChange &&
         | 
| 736 | 
            +
                            rotateHelper.current.triggerChange(({ changeValue, value }) => {
         | 
| 737 | 
            +
                              changeValue(
         | 
| 738 | 
            +
                                (normalizeAngle(((value + delta / 4) * Math.PI) / 180) /
         | 
| 739 | 
            +
                                  Math.PI) *
         | 
| 740 | 
            +
                                  180
         | 
| 741 | 
            +
                              );
         | 
| 742 | 
            +
                            });
         | 
| 743 | 
            +
             | 
| 744 | 
            +
                          e.stopPropagation();
         | 
| 745 | 
            +
                        }
         | 
| 746 | 
            +
                      : undefined
         | 
| 747 | 
            +
                  }
         | 
| 748 | 
            +
                  className={classNames("veCircularView", props.className)}
         | 
| 749 | 
            +
                >
         | 
| 750 | 
            +
                  {!hideName && isZoomedIn && nameEl}
         | 
| 751 | 
            +
             | 
| 752 | 
            +
                  {withRotateCircularView && hasRotateableLength && (
         | 
| 753 | 
            +
                    <RotateCircularViewSlider
         | 
| 754 | 
            +
                      bindOutsideChangeHelper={rotateHelper.current}
         | 
| 755 | 
            +
                      zoomLevel={zoomLevel}
         | 
| 756 | 
            +
                      smallSlider={smallSlider}
         | 
| 757 | 
            +
                      maxZoomLevel={maxZoomLevel}
         | 
| 758 | 
            +
                      setRotationRadians={setRotationRadians}
         | 
| 759 | 
            +
                    ></RotateCircularViewSlider>
         | 
| 760 | 
            +
                  )}
         | 
| 761 | 
            +
                  {withZoomCircularView && hasZoomableLength && (
         | 
| 762 | 
            +
                    <ZoomCircularViewSlider
         | 
| 763 | 
            +
                      zoomHelper={zoomHelper}
         | 
| 764 | 
            +
                      smallSlider={smallSlider}
         | 
| 765 | 
            +
                      onZoom={() => {
         | 
| 766 | 
            +
                        const caret =
         | 
| 767 | 
            +
                          caretPosition > -1
         | 
| 768 | 
            +
                            ? caretPosition
         | 
| 769 | 
            +
                            : selectionLayer.start > -1
         | 
| 770 | 
            +
                            ? getMiddleOfRange(selectionLayer, sequenceLength)
         | 
| 771 | 
            +
                            : undefined;
         | 
| 772 | 
            +
                        if (caret !== undefined) {
         | 
| 773 | 
            +
                          const radToRotateTo = (caret / sequenceLength) * Math.PI * 2;
         | 
| 774 | 
            +
                          rotateHelper.current.triggerChange &&
         | 
| 775 | 
            +
                            rotateHelper.current.triggerChange(({ changeValue }) => {
         | 
| 776 | 
            +
                              const isInView = isRangeOrPositionWithinRange(
         | 
| 777 | 
            +
                                caret,
         | 
| 778 | 
            +
                                rangeToShow,
         | 
| 779 | 
            +
                                sequenceLength
         | 
| 780 | 
            +
                              );
         | 
| 781 | 
            +
                              if (!isInView) {
         | 
| 782 | 
            +
                                if (selectionLayer.start > -1) {
         | 
| 783 | 
            +
                                  const trimmed = trimRangeByAnotherRange(
         | 
| 784 | 
            +
                                    selectionLayer,
         | 
| 785 | 
            +
                                    rangeToShow,
         | 
| 786 | 
            +
                                    sequenceLength
         | 
| 787 | 
            +
                                  );
         | 
| 788 | 
            +
                                  if (
         | 
| 789 | 
            +
                                    trimmed.start !== selectionLayer.start ||
         | 
| 790 | 
            +
                                    trimmed.end !== selectionLayer.end
         | 
| 791 | 
            +
                                  )
         | 
| 792 | 
            +
                                    return;
         | 
| 793 | 
            +
                                }
         | 
| 794 | 
            +
                                changeValue((radToRotateTo / Math.PI) * 180);
         | 
| 795 | 
            +
                              }
         | 
| 796 | 
            +
                            });
         | 
| 797 | 
            +
                        }
         | 
| 798 | 
            +
                        // updateLabelsForInViewFeaturesCircView({ radius });
         | 
| 799 | 
            +
                      }}
         | 
| 800 | 
            +
                      zoomLevel={_zoomLevel}
         | 
| 801 | 
            +
                      maxZoomLevel={maxZoomLevel}
         | 
| 802 | 
            +
                      setZoomLevel={setZoomLevel}
         | 
| 803 | 
            +
                    />
         | 
| 804 | 
            +
                  )}
         | 
| 805 | 
            +
                  <Draggable
         | 
| 806 | 
            +
                    // enableUserSelectHack={false} //needed to prevent the input bubble from losing focus post user drag
         | 
| 807 | 
            +
                    bounds={{ top: 0, left: 0, right: 0, bottom: 0 }}
         | 
| 808 | 
            +
                    onDrag={(event) => {
         | 
| 809 | 
            +
                      getNearestCursorPositionToMouseEvent(event, toPass, editorDragged);
         | 
| 810 | 
            +
                    }}
         | 
| 811 | 
            +
                    onStart={(event) => {
         | 
| 812 | 
            +
                      getNearestCursorPositionToMouseEvent(
         | 
| 813 | 
            +
                        event,
         | 
| 814 | 
            +
                        toPass,
         | 
| 815 | 
            +
                        editorDragStarted
         | 
| 816 | 
            +
                      );
         | 
| 817 | 
            +
                    }}
         | 
| 818 | 
            +
                    onStop={editorDragStopped}
         | 
| 819 | 
            +
                  >
         | 
| 820 | 
            +
                    <div
         | 
| 821 | 
            +
                      ref={withZoomCircularView && hasZoomableLength ? target : undefined}
         | 
| 822 | 
            +
                    >
         | 
| 823 | 
            +
                      <svg
         | 
| 824 | 
            +
                        key="circViewSvg"
         | 
| 825 | 
            +
                        onClick={(event) => {
         | 
| 826 | 
            +
                          instantiated &&
         | 
| 827 | 
            +
                            getNearestCursorPositionToMouseEvent(
         | 
| 828 | 
            +
                              event,
         | 
| 829 | 
            +
                              toPass,
         | 
| 830 | 
            +
                              editorClicked
         | 
| 831 | 
            +
                            );
         | 
| 832 | 
            +
                        }}
         | 
| 833 | 
            +
                        onContextMenu={(e) => {
         | 
| 834 | 
            +
                          getNearestCursorPositionToMouseEvent(
         | 
| 835 | 
            +
                            e,
         | 
| 836 | 
            +
                            toPass,
         | 
| 837 | 
            +
                            backgroundRightClicked
         | 
| 838 | 
            +
                          );
         | 
| 839 | 
            +
                        }}
         | 
| 840 | 
            +
                        style={{
         | 
| 841 | 
            +
                          overflow: "visible",
         | 
| 842 | 
            +
                          display: "block"
         | 
| 843 | 
            +
                        }}
         | 
| 844 | 
            +
                        className="circularViewSvg"
         | 
| 845 | 
            +
                        viewBox={
         | 
| 846 | 
            +
                          isZoomedIn
         | 
| 847 | 
            +
                            ? `${-svgWidth / 2 / smallZoom},${
         | 
| 848 | 
            +
                                -svgHeight / 2 / smallZoom -
         | 
| 849 | 
            +
                                (!isZoomedIn ? 0 : initialRadius + BASE_RADIUS * 2 - 100)
         | 
| 850 | 
            +
                              },${svgWidth / smallZoom},${svgHeight / smallZoom}`
         | 
| 851 | 
            +
                            : `-${radius} -${radius} ${radius * 2} ${radius * 2}`
         | 
| 852 | 
            +
                        }
         | 
| 853 | 
            +
                        width={svgWidth}
         | 
| 854 | 
            +
                        height={svgHeight}
         | 
| 855 | 
            +
                      >
         | 
| 856 | 
            +
                        <g>
         | 
| 857 | 
            +
                          {/* {isZoomedIn && (
         | 
| 858 | 
            +
             | 
| 859 | 
            +
                          )} */}
         | 
| 860 | 
            +
                          <circle
         | 
| 861 | 
            +
                            ref={circRef}
         | 
| 862 | 
            +
                            r={radius}
         | 
| 863 | 
            +
                            style={{ opacity: 0, zIndex: -1 }}
         | 
| 864 | 
            +
                            className="veHiddenAxis"
         | 
| 865 | 
            +
                          ></circle>
         | 
| 866 | 
            +
                          {annotationsSvgs}
         | 
| 867 | 
            +
                          {!hideName && !isZoomedIn && (
         | 
| 868 | 
            +
                            <foreignObject
         | 
| 869 | 
            +
                              x={-72.5 / 2}
         | 
| 870 | 
            +
                              y={-72.5 / 2}
         | 
| 871 | 
            +
                              width={72.5}
         | 
| 872 | 
            +
                              height={72.5}
         | 
| 873 | 
            +
                              transform={`rotate(${(-rotationRadians * 180) / Math.PI})`}
         | 
| 874 | 
            +
                            >
         | 
| 875 | 
            +
                              <div
         | 
| 876 | 
            +
                                xmlns="http://www.w3.org/1999/xhtml"
         | 
| 877 | 
            +
                                key="circViewSvgCenterText"
         | 
| 878 | 
            +
                                className="veCircularViewMiddleOfVectorText"
         | 
| 879 | 
            +
                              >
         | 
| 880 | 
            +
                                <div
         | 
| 881 | 
            +
                                  title={sequenceName}
         | 
| 882 | 
            +
                                  className="veCircularViewTextWrapper"
         | 
| 883 | 
            +
                                  style={{
         | 
| 884 | 
            +
                                    display: "-webkit-box",
         | 
| 885 | 
            +
                                    WebkitLineClamp: "3",
         | 
| 886 | 
            +
                                    WebkitBoxOrient: "vertical",
         | 
| 887 | 
            +
                                    overflow: "hidden",
         | 
| 888 | 
            +
                                    wordBreak: "break-all",
         | 
| 889 | 
            +
                                    textOverflow: "ellipsis",
         | 
| 890 | 
            +
                                    width: 72.5,
         | 
| 891 | 
            +
                                    maxHeight: 72.5 - 15,
         | 
| 892 | 
            +
                                    fontSize: nameFontSizeCircularView
         | 
| 893 | 
            +
                                  }}
         | 
| 894 | 
            +
                                >
         | 
| 895 | 
            +
                                  {sequenceName}
         | 
| 896 | 
            +
                                </div>
         | 
| 897 | 
            +
                                <span title={bpTitle} style={{ fontSize: 10 }}>
         | 
| 898 | 
            +
                                  {bpTitle}
         | 
| 899 | 
            +
                                </span>
         | 
| 900 | 
            +
                              </div>
         | 
| 901 | 
            +
                            </foreignObject>
         | 
| 902 | 
            +
                          )}
         | 
| 903 | 
            +
                        </g>
         | 
| 904 | 
            +
                      </svg>
         | 
| 905 | 
            +
                      <VeTopRightContainer {...{ fullScreen }}>
         | 
| 906 | 
            +
                        {!circular && !noWarnings && (
         | 
| 907 | 
            +
                          <VeWarning
         | 
| 908 | 
            +
                            key="ve-warning-circular-to-linear"
         | 
| 909 | 
            +
                            data-test="ve-warning-circular-to-linear"
         | 
| 910 | 
            +
                            intent="warning"
         | 
| 911 | 
            +
                            tooltip={
         | 
| 912 | 
            +
                              "Warning! You're viewing a linear sequence in the Circular Map. Click on 'Linear Map' to view the linear sequence in a more intuitive way."
         | 
| 913 | 
            +
                            }
         | 
| 914 | 
            +
                          />
         | 
| 915 | 
            +
                        )}
         | 
| 916 | 
            +
                        {!noWarnings && paredDownMessages}
         | 
| 917 | 
            +
                        {isZoomedIn && (
         | 
| 918 | 
            +
                          <CircularZoomMinimap
         | 
| 919 | 
            +
                            rotationRadians={rotationRadians}
         | 
| 920 | 
            +
                            percentOfCircle={percentOfCircle}
         | 
| 921 | 
            +
                          ></CircularZoomMinimap>
         | 
| 922 | 
            +
                        )}
         | 
| 923 | 
            +
                      </VeTopRightContainer>
         | 
| 924 | 
            +
                    </div>
         | 
| 925 | 
            +
                  </Draggable>
         | 
| 926 | 
            +
                </div>
         | 
| 927 | 
            +
              );
         | 
| 928 | 
            +
            }
         | 
| 929 | 
            +
             | 
| 930 | 
            +
            export default withEditorInteractions(CircularView);
         |