@teselagen/bio-parsers 0.4.5 → 0.4.6

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Files changed (5) hide show
  1. package/index.js +9 -10
  2. package/index.mjs +9 -10
  3. package/index.umd.js +9 -10
  4. package/package.json +1 -1
  5. package/src/gffToJson.js +2 -2
package/index.js CHANGED
@@ -948,7 +948,7 @@ lodash.exports;
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  }
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  __name(unicodeWords, "unicodeWords");
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  var runInContext = /* @__PURE__ */ __name(function runInContext2(context) {
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- context = context == null ? root : _2.defaults(root.Object(), context, _2.pick(root, contextProps));
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+ context = context == null ? root : _.defaults(root.Object(), context, _.pick(root, contextProps));
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  var Array2 = context.Array, Date2 = context.Date, Error2 = context.Error, Function2 = context.Function, Math2 = context.Math, Object2 = context.Object, RegExp2 = context.RegExp, String2 = context.String, TypeError2 = context.TypeError;
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  var arrayProto = Array2.prototype, funcProto = Function2.prototype, objectProto = Object2.prototype;
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  var coreJsData = context["__core-js_shared__"];
@@ -6159,17 +6159,16 @@ lodash.exports;
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  }
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  return lodash2;
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  }, "runInContext");
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- var _2 = runInContext();
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+ var _ = runInContext();
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  if (freeModule) {
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- (freeModule.exports = _2)._ = _2;
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- freeExports._ = _2;
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+ (freeModule.exports = _)._ = _;
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+ freeExports._ = _;
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  } else {
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- root._ = _2;
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+ root._ = _;
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  }
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  }).call(commonjsGlobal);
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  })(lodash, lodash.exports);
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  var lodashExports = lodash.exports;
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- const _ = /* @__PURE__ */ getDefaultExportFromCjs(lodashExports);
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  const extended_protein_letters = "ACDEFGHIKLMNPQRSTVWYBXZJUO";
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  const ambiguous_dna_letters = "GATCRYWSMKHBVDN";
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  const ambiguous_rna_letters = "GAUCRYWSMKHBVDN";
@@ -26909,7 +26908,7 @@ function requireBuffer_list() {
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  // Make sure the linked list only shows the minimal necessary information.
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  }, {
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  key: custom,
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- value: /* @__PURE__ */ __name(function value(_2, options) {
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+ value: /* @__PURE__ */ __name(function value(_, options) {
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  return inspect(this, _objectSpread(_objectSpread({}, options), {}, {
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  // Only inspect one level.
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  depth: 0,
@@ -27205,7 +27204,7 @@ function requireBrowser() {
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  try {
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  if (!commonjsGlobal.localStorage)
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  return false;
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- } catch (_2) {
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+ } catch (_) {
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  return false;
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  }
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  var val2 = commonjsGlobal.localStorage[name];
@@ -27313,7 +27312,7 @@ function require_stream_writable() {
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  return this.getBuffer();
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  }, "writableStateBufferGetter"), "_writableState.buffer is deprecated. Use _writableState.getBuffer instead.", "DEP0003")
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  });
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- } catch (_2) {
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+ } catch (_) {
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  }
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  })();
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  var realHasInstance;
@@ -29935,7 +29934,7 @@ function gffToJson(string) {
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  if (!features[feature.seq_id])
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  features[feature.seq_id] = [];
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  const attributes = feature.attributes || {};
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- const name = _.get(attributes, "ID[0]");
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+ const name = lodashExports.get(attributes, "ID[0]");
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  features[feature.seq_id].push({
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  name,
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  start: feature.start,
package/index.mjs CHANGED
@@ -946,7 +946,7 @@ lodash.exports;
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  }
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  __name(unicodeWords, "unicodeWords");
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  var runInContext = /* @__PURE__ */ __name(function runInContext2(context) {
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- context = context == null ? root : _2.defaults(root.Object(), context, _2.pick(root, contextProps));
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+ context = context == null ? root : _.defaults(root.Object(), context, _.pick(root, contextProps));
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  var Array2 = context.Array, Date2 = context.Date, Error2 = context.Error, Function2 = context.Function, Math2 = context.Math, Object2 = context.Object, RegExp2 = context.RegExp, String2 = context.String, TypeError2 = context.TypeError;
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  var arrayProto = Array2.prototype, funcProto = Function2.prototype, objectProto = Object2.prototype;
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  var coreJsData = context["__core-js_shared__"];
@@ -6157,17 +6157,16 @@ lodash.exports;
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  }
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  return lodash2;
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  }, "runInContext");
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- var _2 = runInContext();
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+ var _ = runInContext();
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  if (freeModule) {
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- (freeModule.exports = _2)._ = _2;
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- freeExports._ = _2;
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+ (freeModule.exports = _)._ = _;
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+ freeExports._ = _;
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  } else {
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- root._ = _2;
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+ root._ = _;
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  }
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  }).call(commonjsGlobal);
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  })(lodash, lodash.exports);
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  var lodashExports = lodash.exports;
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- const _ = /* @__PURE__ */ getDefaultExportFromCjs(lodashExports);
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  const extended_protein_letters = "ACDEFGHIKLMNPQRSTVWYBXZJUO";
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  const ambiguous_dna_letters = "GATCRYWSMKHBVDN";
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  const ambiguous_rna_letters = "GAUCRYWSMKHBVDN";
@@ -26907,7 +26906,7 @@ function requireBuffer_list() {
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  // Make sure the linked list only shows the minimal necessary information.
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  }, {
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  key: custom,
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- value: /* @__PURE__ */ __name(function value(_2, options) {
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+ value: /* @__PURE__ */ __name(function value(_, options) {
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  return inspect(this, _objectSpread(_objectSpread({}, options), {}, {
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  // Only inspect one level.
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  depth: 0,
@@ -27203,7 +27202,7 @@ function requireBrowser() {
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  try {
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  if (!commonjsGlobal.localStorage)
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  return false;
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- } catch (_2) {
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+ } catch (_) {
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  return false;
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  }
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  var val2 = commonjsGlobal.localStorage[name];
@@ -27311,7 +27310,7 @@ function require_stream_writable() {
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  return this.getBuffer();
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  }, "writableStateBufferGetter"), "_writableState.buffer is deprecated. Use _writableState.getBuffer instead.", "DEP0003")
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  });
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- } catch (_2) {
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+ } catch (_) {
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  }
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  })();
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  var realHasInstance;
@@ -29933,7 +29932,7 @@ function gffToJson(string) {
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  if (!features[feature.seq_id])
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  features[feature.seq_id] = [];
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  const attributes = feature.attributes || {};
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- const name = _.get(attributes, "ID[0]");
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+ const name = lodashExports.get(attributes, "ID[0]");
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  features[feature.seq_id].push({
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  name,
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  start: feature.start,
package/index.umd.js CHANGED
@@ -950,7 +950,7 @@ var __async = (__this, __arguments, generator) => {
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  }
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  __name(unicodeWords, "unicodeWords");
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  var runInContext = /* @__PURE__ */ __name(function runInContext2(context) {
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- context = context == null ? root : _2.defaults(root.Object(), context, _2.pick(root, contextProps));
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+ context = context == null ? root : _.defaults(root.Object(), context, _.pick(root, contextProps));
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  var Array2 = context.Array, Date2 = context.Date, Error2 = context.Error, Function2 = context.Function, Math2 = context.Math, Object2 = context.Object, RegExp2 = context.RegExp, String2 = context.String, TypeError2 = context.TypeError;
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  var arrayProto = Array2.prototype, funcProto = Function2.prototype, objectProto = Object2.prototype;
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  var coreJsData = context["__core-js_shared__"];
@@ -6161,17 +6161,16 @@ var __async = (__this, __arguments, generator) => {
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  }
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  return lodash2;
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  }, "runInContext");
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- var _2 = runInContext();
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+ var _ = runInContext();
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  if (freeModule) {
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- (freeModule.exports = _2)._ = _2;
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- freeExports._ = _2;
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+ (freeModule.exports = _)._ = _;
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+ freeExports._ = _;
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  } else {
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- root._ = _2;
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+ root._ = _;
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  }
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  }).call(commonjsGlobal);
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  })(lodash, lodash.exports);
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  var lodashExports = lodash.exports;
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- const _ = /* @__PURE__ */ getDefaultExportFromCjs(lodashExports);
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  const extended_protein_letters = "ACDEFGHIKLMNPQRSTVWYBXZJUO";
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  const ambiguous_dna_letters = "GATCRYWSMKHBVDN";
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  const ambiguous_rna_letters = "GAUCRYWSMKHBVDN";
@@ -26911,7 +26910,7 @@ var __async = (__this, __arguments, generator) => {
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  // Make sure the linked list only shows the minimal necessary information.
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  }, {
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  key: custom,
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- value: /* @__PURE__ */ __name(function value(_2, options) {
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+ value: /* @__PURE__ */ __name(function value(_, options) {
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  return inspect(this, _objectSpread(_objectSpread({}, options), {}, {
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  // Only inspect one level.
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  depth: 0,
@@ -27207,7 +27206,7 @@ var __async = (__this, __arguments, generator) => {
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  try {
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  if (!commonjsGlobal.localStorage)
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  return false;
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- } catch (_2) {
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+ } catch (_) {
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  return false;
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  }
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  var val2 = commonjsGlobal.localStorage[name2];
@@ -27315,7 +27314,7 @@ var __async = (__this, __arguments, generator) => {
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  return this.getBuffer();
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  }, "writableStateBufferGetter"), "_writableState.buffer is deprecated. Use _writableState.getBuffer instead.", "DEP0003")
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  });
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- } catch (_2) {
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+ } catch (_) {
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  }
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  })();
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  var realHasInstance;
@@ -29937,7 +29936,7 @@ ${seq.sequence}
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  if (!features[feature.seq_id])
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  features[feature.seq_id] = [];
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  const attributes = feature.attributes || {};
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- const name2 = _.get(attributes, "ID[0]");
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+ const name2 = lodashExports.get(attributes, "ID[0]");
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  features[feature.seq_id].push({
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  name: name2,
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  start: feature.start,
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@teselagen/bio-parsers",
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- "version": "0.4.5",
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+ "version": "0.4.6",
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  "dependencies": {
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  "@teselagen/sequence-utils": "0.3.12",
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  "@teselagen/range-utils": "0.3.7",
package/src/gffToJson.js CHANGED
@@ -1,5 +1,5 @@
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  import gff from "@gmod/gff";
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- import _ from "lodash";
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+ import {get} from "lodash";
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  function gffToJson(string) {
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  const arrayOfThings = gff.parseStringSync(string);
@@ -13,7 +13,7 @@ function gffToJson(string) {
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  const feature = featureOrSeq[0];
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  if (!features[feature.seq_id]) features[feature.seq_id] = [];
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  const attributes = feature.attributes || {};
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- const name = _.get(attributes, "ID[0]");
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+ const name = get(attributes, "ID[0]");
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  features[feature.seq_id].push({
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  name,
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  start: feature.start,