@teselagen/bio-parsers 0.3.9 → 0.3.10

package/index.js

@@ -10775,7 +10775,7 @@ const proteinAlphabet = {
     hydrophobicity: 1.8,
     colorByFamily: "#00FFFF",
     color: "hsl(327.3, 100%, 69%)",
-    mass: 89.1
+    mass: 71.0779
   },
   R: {
     value: "R",
@@ -10784,7 +10784,7 @@ const proteinAlphabet = {
     hydrophobicity: -4.5,
     colorByFamily: "#FFC0CB",
     color: "hsl(258.1, 100%, 69%)",
-    mass: 174.2
+    mass: 156.18568
   },
   N: {
     value: "N",
@@ -10793,7 +10793,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.5,
     colorByFamily: "#D3D3D3",
     color: "hsl(268.9, 100%, 69%)",
-    mass: 132.1
+    mass: 114.10264
   },
   D: {
     value: "D",
@@ -10802,7 +10802,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.5,
     colorByFamily: "#EE82EE",
     color: "hsl(268.9, 100%, 69%)",
-    mass: 133.1
+    mass: 115.0874
   },
   C: {
     value: "C",
@@ -10811,7 +10811,7 @@ const proteinAlphabet = {
     hydrophobicity: 2.5,
     colorByFamily: "#FFFF00",
     color: "hsl(335.1, 100%, 69%)",
-    mass: 121.2
+    mass: 103.1429
   },
   E: {
     value: "E",
@@ -10820,7 +10820,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.5,
     colorByFamily: "#EE82EE",
     color: "hsl(268.9, 100%, 69%)",
-    mass: 147.1
+    mass: 129.11398
   },
   Q: {
     value: "Q",
@@ -10829,7 +10829,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.5,
     colorByFamily: "#D3D3D3",
     color: "hsl(268.9, 100%, 69%)",
-    mass: 146.2
+    mass: 128.12922
   },
   G: {
     value: "G",
@@ -10838,7 +10838,7 @@ const proteinAlphabet = {
     hydrophobicity: -0.4,
     colorByFamily: "#00FFFF",
     color: "hsl(303.1, 100%, 69%)",
-    mass: 75.1
+    mass: 57.05132
   },
   H: {
     value: "H",
@@ -10847,7 +10847,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.2,
     colorByFamily: "#FFC0CB",
     color: "hsl(272.2, 100%, 69%)",
-    mass: 155.2
+    mass: 137.13928
   },
   I: {
     value: "I",
@@ -10856,7 +10856,7 @@ const proteinAlphabet = {
     hydrophobicity: 4.5,
     colorByFamily: "#00FFFF",
     color: "hsl(356.9, 100%, 69%)",
-    mass: 131.2
+    mass: 113.15764
   },
   L: {
     value: "L",
@@ -10865,7 +10865,7 @@ const proteinAlphabet = {
     hydrophobicity: 3.8,
     colorByFamily: "#00FFFF",
     color: "hsl(349.4, 100%, 69%)",
-    mass: 131.2
+    mass: 113.15764
   },
   K: {
     value: "K",
@@ -10874,7 +10874,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.9,
     colorByFamily: "#FFC0CB",
     color: "hsl(264.7, 100%, 69%)",
-    mass: 146.2
+    mass: 128.17228
   },
   M: {
     value: "M",
@@ -10883,7 +10883,7 @@ const proteinAlphabet = {
     hydrophobicity: 1.9,
     colorByFamily: "#FFFF00",
     color: "hsl(328.5, 100%, 69%)",
-    mass: 149.2
+    mass: 131.19606
   },
   F: {
     value: "F",
@@ -10892,7 +10892,7 @@ const proteinAlphabet = {
     hydrophobicity: 2.8,
     colorByFamily: "#FFA500",
     color: "hsl(338.4, 100%, 69%)",
-    mass: 165.2
+    mass: 147.17386
   },
   P: {
     value: "P",
@@ -10901,7 +10901,7 @@ const proteinAlphabet = {
     hydrophobicity: -1.6,
     colorByFamily: "#00FFFF",
     color: "hsl(289.9, 100%, 69%)",
-    mass: 115.1
+    mass: 97.11518
   },
   S: {
     value: "S",
@@ -10910,7 +10910,7 @@ const proteinAlphabet = {
     hydrophobicity: -0.8,
     colorByFamily: "#90EE90",
     color: "hsl(298.6, 100%, 69%)",
-    mass: 105.1
+    mass: 87.0773
   },
   T: {
     value: "T",
@@ -10919,7 +10919,7 @@ const proteinAlphabet = {
     hydrophobicity: -0.7,
     colorByFamily: "#90EE90",
     color: "hsl(299.8, 100%, 69%)",
-    mass: 119.1
+    mass: 101.10388
   },
   U: {
     value: "U",
@@ -10927,7 +10927,7 @@ const proteinAlphabet = {
     threeLettersName: "Sec",
     colorByFamily: "#FF0000",
     color: "hsl(0, 100%, 69%)",
-    mass: 168.1
+    mass: 150.3079
   },
   W: {
     value: "W",
@@ -10936,7 +10936,7 @@ const proteinAlphabet = {
     hydrophobicity: -0.9,
     colorByFamily: "#FFA500",
     color: "hsl(297.6, 100%, 69%)",
-    mass: 204.2
+    mass: 186.2099
   },
   Y: {
     value: "Y",
@@ -10945,7 +10945,7 @@ const proteinAlphabet = {
     hydrophobicity: -1.3,
     colorByFamily: "#FFA500",
     color: "hsl(293.2, 100%, 69%)",
-    mass: 181.2
+    mass: 163.17326
   },
   V: {
     value: "V",
@@ -10954,7 +10954,7 @@ const proteinAlphabet = {
     hydrophobicity: 4.2,
     colorByFamily: "#00FFFF",
     color: "hsl(353.6, 100%, 69%)",
-    mass: 117.1
+    mass: 99.13106
   },
   "*": {
     value: "*",

package/index.mjs

@@ -10773,7 +10773,7 @@ const proteinAlphabet = {
     hydrophobicity: 1.8,
     colorByFamily: "#00FFFF",
     color: "hsl(327.3, 100%, 69%)",
-    mass: 89.1
+    mass: 71.0779
   },
   R: {
     value: "R",
@@ -10782,7 +10782,7 @@ const proteinAlphabet = {
     hydrophobicity: -4.5,
     colorByFamily: "#FFC0CB",
     color: "hsl(258.1, 100%, 69%)",
-    mass: 174.2
+    mass: 156.18568
   },
   N: {
     value: "N",
@@ -10791,7 +10791,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.5,
     colorByFamily: "#D3D3D3",
     color: "hsl(268.9, 100%, 69%)",
-    mass: 132.1
+    mass: 114.10264
   },
   D: {
     value: "D",
@@ -10800,7 +10800,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.5,
     colorByFamily: "#EE82EE",
     color: "hsl(268.9, 100%, 69%)",
-    mass: 133.1
+    mass: 115.0874
   },
   C: {
     value: "C",
@@ -10809,7 +10809,7 @@ const proteinAlphabet = {
     hydrophobicity: 2.5,
     colorByFamily: "#FFFF00",
     color: "hsl(335.1, 100%, 69%)",
-    mass: 121.2
+    mass: 103.1429
   },
   E: {
     value: "E",
@@ -10818,7 +10818,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.5,
     colorByFamily: "#EE82EE",
     color: "hsl(268.9, 100%, 69%)",
-    mass: 147.1
+    mass: 129.11398
   },
   Q: {
     value: "Q",
@@ -10827,7 +10827,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.5,
     colorByFamily: "#D3D3D3",
     color: "hsl(268.9, 100%, 69%)",
-    mass: 146.2
+    mass: 128.12922
   },
   G: {
     value: "G",
@@ -10836,7 +10836,7 @@ const proteinAlphabet = {
     hydrophobicity: -0.4,
     colorByFamily: "#00FFFF",
     color: "hsl(303.1, 100%, 69%)",
-    mass: 75.1
+    mass: 57.05132
   },
   H: {
     value: "H",
@@ -10845,7 +10845,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.2,
     colorByFamily: "#FFC0CB",
     color: "hsl(272.2, 100%, 69%)",
-    mass: 155.2
+    mass: 137.13928
   },
   I: {
     value: "I",
@@ -10854,7 +10854,7 @@ const proteinAlphabet = {
     hydrophobicity: 4.5,
     colorByFamily: "#00FFFF",
     color: "hsl(356.9, 100%, 69%)",
-    mass: 131.2
+    mass: 113.15764
   },
   L: {
     value: "L",
@@ -10863,7 +10863,7 @@ const proteinAlphabet = {
     hydrophobicity: 3.8,
     colorByFamily: "#00FFFF",
     color: "hsl(349.4, 100%, 69%)",
-    mass: 131.2
+    mass: 113.15764
   },
   K: {
     value: "K",
@@ -10872,7 +10872,7 @@ const proteinAlphabet = {
     hydrophobicity: -3.9,
     colorByFamily: "#FFC0CB",
     color: "hsl(264.7, 100%, 69%)",
-    mass: 146.2
+    mass: 128.17228
   },
   M: {
     value: "M",
@@ -10881,7 +10881,7 @@ const proteinAlphabet = {
     hydrophobicity: 1.9,
     colorByFamily: "#FFFF00",
     color: "hsl(328.5, 100%, 69%)",
-    mass: 149.2
+    mass: 131.19606
   },
   F: {
     value: "F",
@@ -10890,7 +10890,7 @@ const proteinAlphabet = {
     hydrophobicity: 2.8,
     colorByFamily: "#FFA500",
     color: "hsl(338.4, 100%, 69%)",
-    mass: 165.2
+    mass: 147.17386
   },
   P: {
     value: "P",
@@ -10899,7 +10899,7 @@ const proteinAlphabet = {
     hydrophobicity: -1.6,
     colorByFamily: "#00FFFF",
     color: "hsl(289.9, 100%, 69%)",
-    mass: 115.1
+    mass: 97.11518
   },
   S: {
     value: "S",
@@ -10908,7 +10908,7 @@ const proteinAlphabet = {
     hydrophobicity: -0.8,
     colorByFamily: "#90EE90",
     color: "hsl(298.6, 100%, 69%)",
-    mass: 105.1
+    mass: 87.0773
   },
   T: {
     value: "T",
@@ -10917,7 +10917,7 @@ const proteinAlphabet = {
     hydrophobicity: -0.7,
     colorByFamily: "#90EE90",
     color: "hsl(299.8, 100%, 69%)",
-    mass: 119.1
+    mass: 101.10388
   },
   U: {
     value: "U",
@@ -10925,7 +10925,7 @@ const proteinAlphabet = {
     threeLettersName: "Sec",
     colorByFamily: "#FF0000",
     color: "hsl(0, 100%, 69%)",
-    mass: 168.1
+    mass: 150.3079
   },
   W: {
     value: "W",
@@ -10934,7 +10934,7 @@ const proteinAlphabet = {
     hydrophobicity: -0.9,
     colorByFamily: "#FFA500",
     color: "hsl(297.6, 100%, 69%)",
-    mass: 204.2
+    mass: 186.2099
   },
   Y: {
     value: "Y",
@@ -10943,7 +10943,7 @@ const proteinAlphabet = {
     hydrophobicity: -1.3,
     colorByFamily: "#FFA500",
     color: "hsl(293.2, 100%, 69%)",
-    mass: 181.2
+    mass: 163.17326
   },
   V: {
     value: "V",
@@ -10952,7 +10952,7 @@ const proteinAlphabet = {
     hydrophobicity: 4.2,
     colorByFamily: "#00FFFF",
     color: "hsl(353.6, 100%, 69%)",
-    mass: 117.1
+    mass: 99.13106
   },
   "*": {
     value: "*",

package/index.umd.js

@@ -10777,7 +10777,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: 1.8,
       colorByFamily: "#00FFFF",
       color: "hsl(327.3, 100%, 69%)",
-      mass: 89.1
+      mass: 71.0779
     },
     R: {
       value: "R",
@@ -10786,7 +10786,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -4.5,
       colorByFamily: "#FFC0CB",
       color: "hsl(258.1, 100%, 69%)",
-      mass: 174.2
+      mass: 156.18568
     },
     N: {
       value: "N",
@@ -10795,7 +10795,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -3.5,
       colorByFamily: "#D3D3D3",
       color: "hsl(268.9, 100%, 69%)",
-      mass: 132.1
+      mass: 114.10264
     },
     D: {
       value: "D",
@@ -10804,7 +10804,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -3.5,
       colorByFamily: "#EE82EE",
       color: "hsl(268.9, 100%, 69%)",
-      mass: 133.1
+      mass: 115.0874
     },
     C: {
       value: "C",
@@ -10813,7 +10813,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: 2.5,
       colorByFamily: "#FFFF00",
       color: "hsl(335.1, 100%, 69%)",
-      mass: 121.2
+      mass: 103.1429
     },
     E: {
       value: "E",
@@ -10822,7 +10822,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -3.5,
       colorByFamily: "#EE82EE",
       color: "hsl(268.9, 100%, 69%)",
-      mass: 147.1
+      mass: 129.11398
     },
     Q: {
       value: "Q",
@@ -10831,7 +10831,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -3.5,
       colorByFamily: "#D3D3D3",
       color: "hsl(268.9, 100%, 69%)",
-      mass: 146.2
+      mass: 128.12922
     },
     G: {
       value: "G",
@@ -10840,7 +10840,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -0.4,
       colorByFamily: "#00FFFF",
       color: "hsl(303.1, 100%, 69%)",
-      mass: 75.1
+      mass: 57.05132
     },
     H: {
       value: "H",
@@ -10849,7 +10849,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -3.2,
       colorByFamily: "#FFC0CB",
       color: "hsl(272.2, 100%, 69%)",
-      mass: 155.2
+      mass: 137.13928
     },
     I: {
       value: "I",
@@ -10858,7 +10858,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: 4.5,
       colorByFamily: "#00FFFF",
       color: "hsl(356.9, 100%, 69%)",
-      mass: 131.2
+      mass: 113.15764
     },
     L: {
       value: "L",
@@ -10867,7 +10867,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: 3.8,
       colorByFamily: "#00FFFF",
       color: "hsl(349.4, 100%, 69%)",
-      mass: 131.2
+      mass: 113.15764
     },
     K: {
       value: "K",
@@ -10876,7 +10876,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -3.9,
       colorByFamily: "#FFC0CB",
       color: "hsl(264.7, 100%, 69%)",
-      mass: 146.2
+      mass: 128.17228
     },
     M: {
       value: "M",
@@ -10885,7 +10885,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: 1.9,
       colorByFamily: "#FFFF00",
       color: "hsl(328.5, 100%, 69%)",
-      mass: 149.2
+      mass: 131.19606
     },
     F: {
       value: "F",
@@ -10894,7 +10894,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: 2.8,
       colorByFamily: "#FFA500",
       color: "hsl(338.4, 100%, 69%)",
-      mass: 165.2
+      mass: 147.17386
     },
     P: {
       value: "P",
@@ -10903,7 +10903,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -1.6,
       colorByFamily: "#00FFFF",
       color: "hsl(289.9, 100%, 69%)",
-      mass: 115.1
+      mass: 97.11518
     },
     S: {
       value: "S",
@@ -10912,7 +10912,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -0.8,
       colorByFamily: "#90EE90",
       color: "hsl(298.6, 100%, 69%)",
-      mass: 105.1
+      mass: 87.0773
     },
     T: {
       value: "T",
@@ -10921,7 +10921,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -0.7,
       colorByFamily: "#90EE90",
       color: "hsl(299.8, 100%, 69%)",
-      mass: 119.1
+      mass: 101.10388
     },
     U: {
       value: "U",
@@ -10929,7 +10929,7 @@ var __async = (__this, __arguments, generator) => {
       threeLettersName: "Sec",
       colorByFamily: "#FF0000",
       color: "hsl(0, 100%, 69%)",
-      mass: 168.1
+      mass: 150.3079
     },
     W: {
       value: "W",
@@ -10938,7 +10938,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -0.9,
       colorByFamily: "#FFA500",
       color: "hsl(297.6, 100%, 69%)",
-      mass: 204.2
+      mass: 186.2099
     },
     Y: {
       value: "Y",
@@ -10947,7 +10947,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: -1.3,
       colorByFamily: "#FFA500",
       color: "hsl(293.2, 100%, 69%)",
-      mass: 181.2
+      mass: 163.17326
     },
     V: {
       value: "V",
@@ -10956,7 +10956,7 @@ var __async = (__this, __arguments, generator) => {
       hydrophobicity: 4.2,
       colorByFamily: "#00FFFF",
       color: "hsl(353.6, 100%, 69%)",
-      mass: 117.1
+      mass: 99.13106
     },
     "*": {
       value: "*",

package/package.json

@@ -1,8 +1,8 @@
 {
   "name": "@teselagen/bio-parsers",
-  "version": "0.3.9",
+  "version": "0.3.10",
   "dependencies": {
-    "@teselagen/sequence-utils": "0.3.7",
+    "@teselagen/sequence-utils": "0.3.8",
     "@teselagen/range-utils": "0.3.7",
     "@gmod/gff": "^1.2.1",
     "buffer": "^6.0.3",