@tenphi/akno-core 0.1.0

package/dist/store/db.js

@@ -0,0 +1,265 @@
+import fs from 'node:fs';
+import path from 'node:path';
+import Database from 'better-sqlite3';
+import * as sqliteVec from 'sqlite-vec';
+import { AknoError } from '@tenphi/akno-protocol';
+import { CONTEXTUAL_ENTITY_MIGRATION_INDEX, CONFLICT_VERDICTS_MIGRATION_INDEX, CONFLICT_QUALIFICATION_MIGRATION_INDEX, DOCUMENT_AVAILABILITY_MIGRATION_INDEX, DOCUMENT_FILE_DATES_MIGRATION_INDEX, ENTITY_GRAPH_MIGRATION_INDEX, FACT_GRAPH_MIGRATION_INDEX, MAINTENANCE_EVIDENCE_MIGRATION_INDEX, MAINTENANCE_ACTION_RECEIPTS_MIGRATION_INDEX, MAINTENANCE_ITEM_POLICY_MIGRATION_INDEX, MAINTENANCE_ITEM_COMPONENT_COUNT_MIGRATION_INDEX, MAINTENANCE_ITEM_REVISIONS_MIGRATION_INDEX, MAINTENANCE_REVISION_ACTOR_MIGRATION_INDEX, MAINTENANCE_RECOVERY_STATE_MIGRATION_INDEX, MANAGED_ITEM_PLACEMENT_VERDICTS_MIGRATION_INDEX, MANAGED_ITEM_ROUTING_VERDICTS_MIGRATION_INDEX, MANAGED_ITEM_SOURCES_MIGRATION_INDEX, MAINTENANCE_ITEM_STATUS_CODE_MIGRATION_INDEX, MAINTENANCE_PLAN_PAYLOAD_RETENTION_MIGRATION_INDEX, MAINTENANCE_PLANS_MIGRATION_INDEX, MAINTENANCE_RUNS_MIGRATION_INDEX, MIGRATIONS, ORPHAN_DOCUMENT_CHUNKS_MIGRATION_INDEX, SCHEMA_VERSION, SEMANTIC_MERGE_EMBEDDINGS_MIGRATION_INDEX, SEMANTIC_MERGE_VERDICTS_MIGRATION_INDEX, STRUCTURAL_GRAPH_MIGRATION_INDEX, } from "./migrations.js";
+import { openVectorIndex, reconcileDimensions } from "./vectors.js";
+/**
+ * There is no engine cold start — opening a SQLite file is half a
+ * millisecond regardless of size, because there is no VM to boot and no server
+ * to connect to. What *is* expensive is spawning a process per operation (33ms
+ * vs 0.04ms for a long-lived handle), which is why `akno serve` exists and why
+ * this function is called once per process rather than once per call.
+ */
+export function openStore(options) {
+    fs.mkdirSync(path.dirname(options.dbPath), { recursive: true });
+    // A read-only open of a file that is not there fails with SQLite's "unable to open
+    // database file", which reads like a permissions problem on the very first run — when
+    // the real answer is that nothing has been indexed yet.
+    if ((options.readOnly ?? false) && !fs.existsSync(options.dbPath)) {
+        throw new AknoError('unavailable', `there is no index at ${options.dbPath} yet — run \`akno index\` first`);
+    }
+    let db;
+    try {
+        db = new Database(options.dbPath, { readonly: options.readOnly ?? false });
+    }
+    catch (err) {
+        throw new AknoError('unavailable', `could not open the index at ${options.dbPath}: ${err instanceof Error ? err.message : String(err)}`);
+    }
+    // WAL: the watcher indexes while an agent reads, with no lock contention
+    // between them. One writer, many readers.
+    if (!options.readOnly) {
+        db.pragma('journal_mode = WAL');
+        db.pragma('synchronous = NORMAL');
+        // Retention of private plan bodies must remove their bytes from freed SQLite cells, not
+        // merely make them unreachable through SELECT while they remain recoverable in the file.
+        db.pragma('secure_delete = ON');
+    }
+    db.pragma('foreign_keys = ON');
+    db.pragma('busy_timeout = 5000');
+    // 64 MB of page cache. The largest knowledge base this is tuned for is under a
+    // megabyte of Markdown, so this holds the whole index comfortably.
+    db.pragma('cache_size = -64000');
+    let vecLoaded = false;
+    try {
+        sqliteVec.load(db);
+        vecLoaded = true;
+    }
+    catch {
+        // Degrade, never fail. Cosine moves to JS; memory stays available.
+        vecLoaded = false;
+    }
+    if (!options.readOnly)
+        migrate(db);
+    const needsReembed = options.readOnly
+        ? false
+        : reconcileDimensions(db, options.embeddingDimensions, vecLoaded);
+    const vectors = openVectorIndex(db, options.embeddingDimensions, vecLoaded);
+    const getMeta = db.prepare('SELECT value FROM meta WHERE key = ?');
+    const putMeta = db.prepare('INSERT INTO meta(key, value) VALUES(?, ?) ON CONFLICT(key) DO UPDATE SET value = excluded.value');
+    return {
+        db,
+        vectors,
+        vecLoaded,
+        readOnly: options.readOnly ?? false,
+        needsReembed,
+        transaction(fn) {
+            return db.transaction(fn)();
+        },
+        meta(key) {
+            const row = getMeta.get(key);
+            return row?.value ?? null;
+        },
+        setMeta(key, value) {
+            putMeta.run(key, value);
+        },
+        close() {
+            try {
+                if (!options.readOnly)
+                    db.pragma('wal_checkpoint(TRUNCATE)');
+            }
+            catch {
+                // A checkpoint failure on close costs nothing — WAL replays on next open.
+            }
+            db.close();
+        },
+    };
+}
+function migrate(db) {
+    const current = db.pragma('user_version', { simple: true }) ?? 0;
+    db.transaction(() => {
+        if (current === 0) {
+            // A new database starts from the compact canonical schema, then receives every
+            // durable extension. Its version is the historical schema number below, not 3.
+            for (const migration of MIGRATIONS)
+                db.exec(migration);
+        }
+        else {
+            // Released databases exist with both compact version 1 and historical version 8.
+            // Table/column capabilities are unambiguous where an array index is not.
+            if (!tableExists(db, 'maintenance_plans')) {
+                db.exec(MIGRATIONS[MAINTENANCE_PLANS_MIGRATION_INDEX]);
+            }
+            if (!columnExists(db, 'maintenance_items', 'evidence')) {
+                db.exec(MIGRATIONS[MAINTENANCE_EVIDENCE_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'conflict_verdicts')) {
+                db.exec(MIGRATIONS[CONFLICT_VERDICTS_MIGRATION_INDEX]);
+            }
+            if (!columnExists(db, 'conflict_verdicts', 'qualification')) {
+                db.exec(MIGRATIONS[CONFLICT_QUALIFICATION_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'maintenance_runs')) {
+                db.exec(MIGRATIONS[MAINTENANCE_RUNS_MIGRATION_INDEX]);
+            }
+            if (columnIsNotNull(db, 'chunks', 'page_id')) {
+                db.exec(MIGRATIONS[ORPHAN_DOCUMENT_CHUNKS_MIGRATION_INDEX]);
+            }
+            if (!columnExists(db, 'documents', 'availability')) {
+                db.exec(MIGRATIONS[DOCUMENT_AVAILABILITY_MIGRATION_INDEX]);
+            }
+            if (!columnExists(db, 'documents', 'file_modified_at')) {
+                db.exec(MIGRATIONS[DOCUMENT_FILE_DATES_MIGRATION_INDEX]);
+            }
+            if (!columnExists(db, 'maintenance_items', 'policy')) {
+                db.exec(MIGRATIONS[MAINTENANCE_ITEM_POLICY_MIGRATION_INDEX]);
+            }
+            if (!columnExists(db, 'maintenance_items', 'status_code')) {
+                db.exec(MIGRATIONS[MAINTENANCE_ITEM_STATUS_CODE_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'graph_nodes')) {
+                db.exec(MIGRATIONS[STRUCTURAL_GRAPH_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'graph_entities')) {
+                db.exec(MIGRATIONS[ENTITY_GRAPH_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'graph_fact_status')) {
+                db.exec(MIGRATIONS[FACT_GRAPH_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'graph_resolution_verdicts')) {
+                db.exec(MIGRATIONS[CONTEXTUAL_ENTITY_MIGRATION_INDEX]);
+            }
+            if (!columnExists(db, 'maintenance_plans', 'payload_pruned_at')) {
+                db.exec(MIGRATIONS[MAINTENANCE_PLAN_PAYLOAD_RETENTION_MIGRATION_INDEX]);
+            }
+            if (!columnExists(db, 'maintenance_items', 'component_count')) {
+                db.exec(MIGRATIONS[MAINTENANCE_ITEM_COMPONENT_COUNT_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'semantic_merge_verdicts')) {
+                db.exec(MIGRATIONS[SEMANTIC_MERGE_VERDICTS_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'semantic_merge_embeddings')) {
+                db.exec(MIGRATIONS[SEMANTIC_MERGE_EMBEDDINGS_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'managed_item_placement_verdicts')) {
+                db.exec(MIGRATIONS[MANAGED_ITEM_PLACEMENT_VERDICTS_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'managed_item_sources')) {
+                db.exec(MIGRATIONS[MANAGED_ITEM_SOURCES_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'managed_item_routing_verdicts')) {
+                db.exec(MIGRATIONS[MANAGED_ITEM_ROUTING_VERDICTS_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'maintenance_item_revisions')) {
+                db.exec(MIGRATIONS[MAINTENANCE_ITEM_REVISIONS_MIGRATION_INDEX]);
+            }
+            if (!columnExists(db, 'maintenance_item_revisions', 'revision_actor')) {
+                db.exec(MIGRATIONS[MAINTENANCE_REVISION_ACTOR_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'maintenance_action_receipts')) {
+                db.exec(MIGRATIONS[MAINTENANCE_ACTION_RECEIPTS_MIGRATION_INDEX]);
+            }
+            if (!tableExists(db, 'maintenance_recovery_state')) {
+                db.exec(MIGRATIONS[MAINTENANCE_RECOVERY_STATE_MIGRATION_INDEX]);
+            }
+        }
+        if (current < SCHEMA_VERSION)
+            db.pragma(`user_version = ${SCHEMA_VERSION}`);
+    })();
+}
+function tableExists(db, name) {
+    const row = db
+        .prepare("SELECT 1 AS present FROM sqlite_master WHERE type = 'table' AND name = ?")
+        .get(name);
+    return row?.present === 1;
+}
+function columnExists(db, table, column) {
+    const rows = db.pragma(`table_info(${JSON.stringify(table)})`);
+    return rows.some((row) => row.name === column);
+}
+function columnIsNotNull(db, table, column) {
+    const rows = db.pragma(`table_info(${JSON.stringify(table)})`);
+    return rows.some((row) => row.name === column && row.notnull === 1);
+}
+/**
+ * Take the write handle, waiting briefly for a handover.
+ *
+ * `waitMs` exists because of how a restart actually goes: the supervisor starts the new process
+ * while the old one is still closing its database and unlinking its lock. Checking once, at that
+ * instant, is how a service comes up read-only — and it then stays that way for its whole life,
+ * failing every write with the pid of a process that has since exited. Observed on a real install:
+ * hours of `remember` calls refused by a daemon deferring to a ghost.
+ *
+ * A few seconds covers the handover and costs nothing when the lock is free, which is the normal
+ * case. It does not paper over a genuine second Akno — that one is still running when the wait
+ * runs out, and is still refused.
+ */
+export function acquireWriteLock(lockPath, waitMs = 0) {
+    fs.mkdirSync(path.dirname(lockPath), { recursive: true });
+    const deadline = Date.now() + waitMs;
+    let existing = readLockPid(lockPath);
+    while (existing !== null && existing !== process.pid && isProcessAlive(existing) && Date.now() < deadline) {
+        sleep(100);
+        existing = readLockPid(lockPath);
+    }
+    if (existing !== null && existing !== process.pid && isProcessAlive(existing)) {
+        return { acquired: false, heldByPid: existing, failure: 'held', release: () => { } };
+    }
+    try {
+        // A stale lock from a crashed process is safe to take over — the pid check
+        // above already proved nothing is behind it.
+        fs.writeFileSync(lockPath, String(process.pid), 'utf8');
+    }
+    catch {
+        return { acquired: false, heldByPid: null, failure: 'unwritable', release: () => { } };
+    }
+    let released = false;
+    const release = () => {
+        if (released)
+            return;
+        released = true;
+        try {
+            if (readLockPid(lockPath) === process.pid)
+                fs.unlinkSync(lockPath);
+        }
+        catch {
+            // Nothing useful to do; the pid check makes a leftover file harmless.
+        }
+    };
+    return { acquired: true, heldByPid: process.pid, release };
+}
+/** Blocking, deliberately: this runs before anything is open and there is nothing to yield to. */
+function sleep(ms) {
+    Atomics.wait(new Int32Array(new SharedArrayBuffer(4)), 0, 0, ms);
+}
+function readLockPid(lockPath) {
+    try {
+        const pid = Number(fs.readFileSync(lockPath, 'utf8').trim());
+        return Number.isInteger(pid) && pid > 0 ? pid : null;
+    }
+    catch {
+        return null;
+    }
+}
+function isProcessAlive(pid) {
+    try {
+        // Signal 0 tests for existence without delivering anything.
+        process.kill(pid, 0);
+        return true;
+    }
+    catch (err) {
+        return err.code === 'EPERM';
+    }
+}
+//# sourceMappingURL=db.js.map

package/dist/store/db.js.map

@@ -0,0 +1 @@
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package/dist/store/ids.d.ts

@@ -0,0 +1,29 @@
+/**
+ * ULID-shaped: 10 chars of millisecond timestamp then 6 of randomness, in
+ * Crockford base32. Lexicographically sortable by creation time, which makes
+ * `ORDER BY id` a usable proxy for `ORDER BY created_at` and keeps a page id
+ * short enough to sit in frontmatter without looking like a mistake (§12).
+ */
+export declare function newPageId(now?: number): string;
+/**
+ * Short, prefixed and human-quotable, for ids a user copies out of output and
+ * pastes into another command — `undo chg_7c1e`, `approve prop_8f2a`. Random
+ * rather than sequential: an id that reveals how many changes exist invites
+ * guessing at neighbouring ones.
+ */
+export declare function newPrefixedId(prefix: string): string;
+export declare function sha256(input: string | Buffer): string;
+/**
+ * §8. A fact id is a hash of (page id, source line hash, normalized claim), so
+ * an unchanged line keeps its fact and its id across restarts, re-indexes and
+ * process lifetimes — long enough for a user to see recall output and then
+ * forget one of the entries. Deliberately *not* durable across a full rebuild,
+ * since a fresh derivation may phrase the claim differently; nothing stores them
+ * long-term.
+ */
+export declare function factId(pageId: string, sourceLineHash: string, claim: string): string;
+/** A managed knowledge unit keeps its fact identity through wording and page moves. */
+export declare function managedFactId(itemId: string): string;
+/** Collapses an event that exists both in the ledger and on its page (§10). */
+export declare function eventId(date: string, targetSlug: string | null, summary: string): string;
+//# sourceMappingURL=ids.d.ts.map

package/dist/store/ids.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"ids.d.ts","sourceRoot":"","sources":["../../src/store/ids.ts"],"names":[],"mappings":"AAIA;;;;;GAKG;AACH,wBAAgB,SAAS,CAAC,GAAG,SAAa,GAAG,MAAM,CAWlD;AAED;;;;;GAKG;AACH,wBAAgB,aAAa,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,CAEpD;AAED,wBAAgB,MAAM,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,GAAG,MAAM,CAErD;AAED;;;;;;;GAOG;AACH,wBAAgB,MAAM,CAAC,MAAM,EAAE,MAAM,EAAE,cAAc,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,GAAG,MAAM,CAGpF;AAED,uFAAuF;AACvF,wBAAgB,aAAa,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,CAEpD;AAED,+EAA+E;AAC/E,wBAAgB,OAAO,CAAC,IAAI,EAAE,MAAM,EAAE,UAAU,EAAE,MAAM,GAAG,IAAI,EAAE,OAAO,EAAE,MAAM,GAAG,MAAM,CAGxF"}

package/dist/store/ids.js.map

@@ -0,0 +1 @@
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package/dist/store/migrations.d.ts

@@ -0,0 +1,54 @@
+/**
+ * One SQLite file. Deleting it costs one re-index and no data — that
+ * property is the design, and it is why nothing here is a source of truth.
+ * The journal, live maintenance plans, replayable managed-item source quotes, and content-safe run receipts are
+ * the durable exceptions. The journal keeps prior bytes for undo; a sealed plan keeps exact proposed bytes so a
+ * decision survives a restart and never has to regenerate a possibly different rewrite; one bounded exact
+ * quote lets a generated sentence be checked later; the receipt explains the lifecycle around them.
+ *
+ * The first entry is the canonical 0.1.0 schema, compacted from historical versions
+ * 1–8. Later entries add durable exceptions or new rebuildable index capabilities.
+ * `user_version` therefore uses the historical schema number, not this array's length.
+ * Upgrade code capability-checks durable tables and columns so databases created before
+ * or after the compaction converge on the same schema.
+ */
+export declare const SCHEMA_VERSION = 32;
+export declare const MAINTENANCE_PLANS_MIGRATION_INDEX = 1;
+export declare const MAINTENANCE_EVIDENCE_MIGRATION_INDEX = 2;
+export declare const CONFLICT_VERDICTS_MIGRATION_INDEX = 3;
+export declare const CONFLICT_QUALIFICATION_MIGRATION_INDEX = 4;
+export declare const MAINTENANCE_RUNS_MIGRATION_INDEX = 5;
+export declare const ORPHAN_DOCUMENT_CHUNKS_MIGRATION_INDEX = 6;
+export declare const DOCUMENT_AVAILABILITY_MIGRATION_INDEX = 7;
+export declare const DOCUMENT_FILE_DATES_MIGRATION_INDEX = 8;
+export declare const MAINTENANCE_ITEM_POLICY_MIGRATION_INDEX = 9;
+export declare const MAINTENANCE_ITEM_STATUS_CODE_MIGRATION_INDEX = 10;
+export declare const STRUCTURAL_GRAPH_MIGRATION_INDEX = 11;
+export declare const ENTITY_GRAPH_MIGRATION_INDEX = 12;
+export declare const FACT_GRAPH_MIGRATION_INDEX = 13;
+export declare const CONTEXTUAL_ENTITY_MIGRATION_INDEX = 14;
+export declare const MAINTENANCE_PLAN_PAYLOAD_RETENTION_MIGRATION_INDEX = 15;
+export declare const MAINTENANCE_ITEM_COMPONENT_COUNT_MIGRATION_INDEX = 16;
+export declare const SEMANTIC_MERGE_VERDICTS_MIGRATION_INDEX = 17;
+export declare const SEMANTIC_MERGE_EMBEDDINGS_MIGRATION_INDEX = 18;
+export declare const MANAGED_ITEM_PLACEMENT_VERDICTS_MIGRATION_INDEX = 19;
+export declare const MANAGED_ITEM_SOURCES_MIGRATION_INDEX = 20;
+export declare const MANAGED_ITEM_ROUTING_VERDICTS_MIGRATION_INDEX = 21;
+export declare const MAINTENANCE_ITEM_REVISIONS_MIGRATION_INDEX = 22;
+export declare const MAINTENANCE_REVISION_ACTOR_MIGRATION_INDEX = 23;
+export declare const MAINTENANCE_ACTION_RECEIPTS_MIGRATION_INDEX = 24;
+export declare const MAINTENANCE_RECOVERY_STATE_MIGRATION_INDEX = 25;
+export declare const MIGRATIONS: string[];
+/**
+ * The vector table is created separately: its dimension is fixed at creation
+ * and comes from the configured embedding model. Changing models triggers a
+ * re-embed rather than silently corrupting the index.
+ */
+export declare function vectorTableDdl(dimensions: number): string;
+/**
+ * Fallback when the sqlite-vec extension cannot be loaded on this platform.
+ * Cosine is computed in JS. Slower, but memory stays available: degrade,
+ * never fail.
+ */
+export declare const VECTOR_FALLBACK_DDL = "\n  CREATE TABLE IF NOT EXISTS vec_fallback (\n    chunk_id   INTEGER PRIMARY KEY REFERENCES chunks(id) ON DELETE CASCADE,\n    embedding  BLOB NOT NULL,\n    norm       REAL NOT NULL\n  )\n";
+//# sourceMappingURL=migrations.d.ts.map

package/dist/store/migrations.d.ts.map

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