@tekmidian/pai 0.54.0 → 0.55.0

package/dist/sqlite-By6r2YhZ.mjs.map

@@ -1 +0,0 @@
-{"version":3,"file":"sqlite-By6r2YhZ.mjs","names":[],"sources":["../src/storage/sqlite.ts"],"sourcesContent":["/**\n * SQLiteBackend — wraps the existing better-sqlite3 federation.db\n * behind the StorageBackend interface.\n *\n * This is a thin adapter.  The heavy lifting is all in the existing\n * memory/indexer.ts and memory/search.ts code; we just provide a\n * backend-agnostic surface so the daemon and tools can call either\n * SQLite or Postgres transparently.\n */\n\nimport type { Database } from \"better-sqlite3\";\nimport type { StorageBackend, ChunkRow, FileRow, FederationStats } from \"./interface.js\";\nimport type { SearchResult, SearchOptions } from \"../memory/search.js\";\nimport { searchMemory, searchMemorySemantic } from \"../memory/search.js\";\n\nexport class SQLiteBackend implements StorageBackend {\n  readonly backendType = \"sqlite\" as const;\n\n  private db: Database;\n\n  constructor(db: Database) {\n    this.db = db;\n  }\n\n  /**\n   * Expose the raw better-sqlite3 Database handle.\n   * Used by the daemon to pass to indexAll() which still uses the synchronous API directly.\n   */\n  getRawDb(): Database {\n    return this.db;\n  }\n\n  /**\n   * Alias for getRawDb() — used by the dispatcher for operations that require\n   * direct SQLite access (e.g. memory_feedback, touchChunksLastAccessed).\n   */\n  getSqliteDb(): Database {\n    return this.db;\n  }\n\n  // -------------------------------------------------------------------------\n  // Lifecycle\n  // -------------------------------------------------------------------------\n\n  async close(): Promise<void> {\n    try {\n      this.db.close();\n    } catch {\n      // ignore\n    }\n  }\n\n  async getStats(): Promise<FederationStats> {\n    const files = (\n      this.db.prepare(\"SELECT COUNT(*) AS n FROM memory_files\").get() as { n: number }\n    ).n;\n    const chunks = (\n      this.db.prepare(\"SELECT COUNT(*) AS n FROM memory_chunks\").get() as { n: number }\n    ).n;\n    return { files, chunks };\n  }\n\n  // -------------------------------------------------------------------------\n  // File tracking\n  // -------------------------------------------------------------------------\n\n  async getFileHash(projectId: number, path: string): Promise<string | undefined> {\n    const row = this.db\n      .prepare(\"SELECT hash FROM memory_files WHERE project_id = ? AND path = ?\")\n      .get(projectId, path) as { hash: string } | undefined;\n    return row?.hash;\n  }\n\n  async upsertFile(file: FileRow): Promise<void> {\n    this.db\n      .prepare(\n        `INSERT INTO memory_files (project_id, path, source, tier, hash, mtime, size)\n         VALUES (?, ?, ?, ?, ?, ?, ?)\n         ON CONFLICT(project_id, path) DO UPDATE SET\n           source = excluded.source,\n           tier   = excluded.tier,\n           hash   = excluded.hash,\n           mtime  = excluded.mtime,\n           size   = excluded.size`\n      )\n      .run(file.projectId, file.path, file.source, file.tier, file.hash, file.mtime, file.size);\n  }\n\n  // -------------------------------------------------------------------------\n  // Chunk management\n  // -------------------------------------------------------------------------\n\n  async getChunkIds(projectId: number, path: string): Promise<string[]> {\n    const rows = this.db\n      .prepare(\"SELECT id FROM memory_chunks WHERE project_id = ? AND path = ?\")\n      .all(projectId, path) as Array<{ id: string }>;\n    return rows.map((r) => r.id);\n  }\n\n  async deleteChunksForFile(projectId: number, path: string): Promise<void> {\n    const ids = await this.getChunkIds(projectId, path);\n    const deleteFts = this.db.prepare(\"DELETE FROM memory_fts WHERE id = ?\");\n    const deleteChunks = this.db.prepare(\n      \"DELETE FROM memory_chunks WHERE project_id = ? AND path = ?\"\n    );\n    this.db.transaction(() => {\n      for (const id of ids) {\n        deleteFts.run(id);\n      }\n      deleteChunks.run(projectId, path);\n    })();\n  }\n\n  async insertChunks(chunks: ChunkRow[]): Promise<void> {\n    if (chunks.length === 0) return;\n\n    const insertChunk = this.db.prepare(\n      `INSERT INTO memory_chunks (id, project_id, source, tier, path, start_line, end_line, hash, text, updated_at)\n       VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)`\n    );\n    const insertFts = this.db.prepare(\n      `INSERT INTO memory_fts (text, id, project_id, path, source, tier, start_line, end_line)\n       VALUES (?, ?, ?, ?, ?, ?, ?, ?)`\n    );\n\n    this.db.transaction(() => {\n      for (const c of chunks) {\n        insertChunk.run(\n          c.id,\n          c.projectId,\n          c.source,\n          c.tier,\n          c.path,\n          c.startLine,\n          c.endLine,\n          c.hash,\n          c.text,\n          c.updatedAt\n        );\n        insertFts.run(\n          c.text,\n          c.id,\n          c.projectId,\n          c.path,\n          c.source,\n          c.tier,\n          c.startLine,\n          c.endLine\n        );\n      }\n    })();\n  }\n\n  async getDistinctChunkPaths(projectId: number): Promise<string[]> {\n    const rows = this.db\n      .prepare(\"SELECT DISTINCT path FROM memory_chunks WHERE project_id = ?\")\n      .all(projectId) as Array<{ path: string }>;\n    return rows.map((r) => r.path);\n  }\n\n  async deletePaths(projectId: number, paths: string[]): Promise<void> {\n    if (paths.length === 0) return;\n    const deleteFts = this.db.prepare(\"DELETE FROM memory_fts WHERE id = ?\");\n    const deleteChunks = this.db.prepare(\n      \"DELETE FROM memory_chunks WHERE project_id = ? AND path = ?\"\n    );\n    const deleteFile = this.db.prepare(\n      \"DELETE FROM memory_files WHERE project_id = ? AND path = ?\"\n    );\n    this.db.transaction(() => {\n      for (const path of paths) {\n        const ids = this.db\n          .prepare(\"SELECT id FROM memory_chunks WHERE project_id = ? AND path = ?\")\n          .all(projectId, path) as Array<{ id: string }>;\n        for (const { id } of ids) {\n          deleteFts.run(id);\n        }\n        deleteChunks.run(projectId, path);\n        deleteFile.run(projectId, path);\n      }\n    })();\n  }\n\n  async getUnembeddedChunkIds(projectId?: number, limit?: number): Promise<Array<{ id: string; text: string; project_id: number; path: string }>> {\n    const conditions = [\"embedding IS NULL\"];\n    const params: (string | number)[] = [];\n\n    if (projectId !== undefined) {\n      conditions.push(\"project_id = ?\");\n      params.push(projectId);\n    }\n\n    const where = \"WHERE \" + conditions.join(\" AND \");\n    // Prioritize real knowledge notes over PAI session/job-search noise.\n    // CASE expression assigns lower priority numbers to knowledge paths.\n    const rows = this.db\n      .prepare(`SELECT id, text, project_id, path FROM memory_chunks ${where}\n        ORDER BY CASE\n          WHEN path LIKE '🧠 Ideaverse/%' THEN 0\n          WHEN path LIKE 'Z - Zettelkasten/%' THEN 0\n          WHEN path LIKE '💼 Business/%' THEN 0\n          WHEN path LIKE '📆 Meetings/%' THEN 1\n          WHEN path LIKE '💡 Insights/%' THEN 1\n          WHEN path LIKE '👨‍💻 People/%' THEN 1\n          WHEN path LIKE 'University/%' THEN 1\n          WHEN path LIKE 'Copilot/%' THEN 1\n          WHEN path LIKE '🗓️ Daily Notes/%' THEN 2\n          WHEN path LIKE 'PAI/%' THEN 3\n          WHEN path LIKE '09-job-search/%' THEN 4\n          WHEN path LIKE 'seriousletter/%' THEN 4\n          WHEN path LIKE 'Attachments/%' THEN 5\n          ELSE 2\n        END, id${limit !== undefined ? \" LIMIT ?\" : \"\"}`)\n      .all(...params, ...(limit !== undefined ? [limit] : [])) as Array<{ id: string; text: string; project_id: number; path: string }>;\n    return rows;\n  }\n\n  async updateEmbedding(chunkId: string, embedding: Buffer): Promise<void> {\n    this.db\n      .prepare(\"UPDATE memory_chunks SET embedding = ? WHERE id = ?\")\n      .run(embedding, chunkId);\n  }\n\n  // -------------------------------------------------------------------------\n  // Search\n  // -------------------------------------------------------------------------\n\n  async searchKeyword(query: string, opts?: SearchOptions): Promise<SearchResult[]> {\n    return searchMemory(this.db, query, opts);\n  }\n\n  async searchSemantic(queryEmbedding: Float32Array, opts?: SearchOptions): Promise<SearchResult[]> {\n    return searchMemorySemantic(this.db, queryEmbedding, opts);\n  }\n\n  // -------------------------------------------------------------------------\n  // Vault operations — not supported on SQLite backend (use Postgres)\n  // -------------------------------------------------------------------------\n\n  private vaultNotSupported(): never {\n    throw new Error(\"Vault operations require the Postgres backend\");\n  }\n\n  async upsertVaultFile(): Promise<void> { this.vaultNotSupported(); }\n  async deleteVaultFile(): Promise<void> { this.vaultNotSupported(); }\n  async getVaultFile(): Promise<null> { this.vaultNotSupported(); }\n  async getVaultFileByInode(): Promise<null> { this.vaultNotSupported(); }\n  async getAllVaultFiles(): Promise<never[]> { this.vaultNotSupported(); }\n  async getRecentVaultFiles(): Promise<never[]> { this.vaultNotSupported(); }\n  async countVaultFiles(): Promise<number> { this.vaultNotSupported(); }\n  async upsertVaultAliases(): Promise<void> { this.vaultNotSupported(); }\n  async deleteVaultAliases(): Promise<void> { this.vaultNotSupported(); }\n  async replaceLinksForSources(): Promise<void> { this.vaultNotSupported(); }\n  async getLinksFromSource(): Promise<never[]> { this.vaultNotSupported(); }\n  async getLinksToTarget(): Promise<never[]> { this.vaultNotSupported(); }\n  async getVaultLinkGraph(): Promise<never[]> { this.vaultNotSupported(); }\n  async upsertVaultHealth(): Promise<void> { this.vaultNotSupported(); }\n  async getVaultHealth(): Promise<null> { this.vaultNotSupported(); }\n  async getOrphans(): Promise<never[]> { this.vaultNotSupported(); }\n  async getDeadLinks(): Promise<never[]> { this.vaultNotSupported(); }\n  async upsertNameIndex(): Promise<void> { this.vaultNotSupported(); }\n  async replaceNameIndex(): Promise<void> { this.vaultNotSupported(); }\n  async resolveVaultName(): Promise<never[]> { this.vaultNotSupported(); }\n  async searchVaultNameIndex(): Promise<never[]> { this.vaultNotSupported(); }\n  async getVaultFilesByPaths(): Promise<never[]> { this.vaultNotSupported(); }\n  async getVaultFilesByPathsAfter(): Promise<never[]> { this.vaultNotSupported(); }\n  async getVaultLinksFromPaths(): Promise<never[]> { this.vaultNotSupported(); }\n  async getChunksWithEmbeddings(): Promise<never[]> { this.vaultNotSupported(); }\n  async getChunksForPath(): Promise<never[]> { this.vaultNotSupported(); }\n  async searchChunksByText(): Promise<never[]> { this.vaultNotSupported(); }\n  async countVaultFilesWithPrefix(): Promise<number> { this.vaultNotSupported(); }\n  async countVaultFilesAfter(): Promise<number> { this.vaultNotSupported(); }\n  async countVaultLinksWithPrefix(): Promise<number> { this.vaultNotSupported(); }\n  async countVaultLinksAfter(): Promise<number> { this.vaultNotSupported(); }\n  async getDeadLinksWithLineNumbers(): Promise<never[]> { this.vaultNotSupported(); }\n  async getDeadLinksWithPrefix(): Promise<never[]> { this.vaultNotSupported(); }\n  async getDeadLinksAfter(): Promise<never[]> { this.vaultNotSupported(); }\n  async getOrphansWithPrefix(): Promise<never[]> { this.vaultNotSupported(); }\n  async getOrphansAfter(): Promise<never[]> { this.vaultNotSupported(); }\n  async getLowConnectivity(): Promise<never[]> { this.vaultNotSupported(); }\n  async getLowConnectivityWithPrefix(): Promise<never[]> { this.vaultNotSupported(); }\n  async getLowConnectivityAfter(): Promise<never[]> { this.vaultNotSupported(); }\n  async getAllVaultFilePaths(): Promise<never[]> { this.vaultNotSupported(); }\n  async getVaultFilePathsWithPrefix(): Promise<never[]> { this.vaultNotSupported(); }\n  async getVaultFilePathsAfter(): Promise<never[]> { this.vaultNotSupported(); 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package/dist/state-Ca0ltLgI.mjs

@@ -1,3 +0,0 @@
-import { A as vaultIndexInProgress, C as setShutdownRequested, D as shutdownRequested, E as setVaultIndexInProgress, O as startTime, S as setRegistryDb, T as setStorageBackend, _ as setIndexSchedulerTimer, a as indexInProgress, b as setLastVaultIndexTime, c as lastIndexTime, d as registryDb, f as setCacheKeepaliveTimer, g as setIndexInProgress, h as setEmbedSchedulerTimer, i as embedSchedulerTimer, k as storageBackend, l as lastVaultIndexTime, m as setEmbedInProgress, n as daemonConfig, o as indexSchedulerTimer, p as setDaemonConfig, r as embedInProgress, s as lastEmbedTime, t as cacheKeepaliveTimer, u as notificationConfig, v as setLastEmbedTime, w as setStartTime, x as setNotificationConfig, y as setLastIndexTime } from "./state-DwrsOoMi.mjs";
-
-export { lastVaultIndexTime, notificationConfig };

package/dist/state-DwrsOoMi.mjs.map

@@ -1 +0,0 @@
-{"version":3,"file":"state-DwrsOoMi.mjs","names":[],"sources":["../src/daemon/daemon/state.ts"],"sourcesContent":["/**\n * Shared mutable daemon state — module-level singletons used across all daemon sub-modules.\n */\n\nimport { openRegistry } from \"../../registry/db.js\";\nimport type { StorageBackend } from \"../../storage/interface.js\";\nimport type { NotificationConfig } from \"../../notifications/types.js\";\nimport type { PaiDaemonConfig } from \"../config.js\";\n\n// ---------------------------------------------------------------------------\n// Core singletons (assigned at startup by serve())\n// ---------------------------------------------------------------------------\n\nexport let registryDb: ReturnType<typeof openRegistry>;\nexport let storageBackend: StorageBackend;\nexport let daemonConfig: PaiDaemonConfig;\nexport let startTime = Date.now();\n\n// ---------------------------------------------------------------------------\n// Scheduler state\n// ---------------------------------------------------------------------------\n\n/** True while a project index pass is running. */\nexport let indexInProgress = false;\nexport let lastIndexTime = 0;\nexport let indexSchedulerTimer: ReturnType<typeof setInterval> | null = null;\n\n/** True while an embedding pass is running. */\nexport let embedInProgress = false;\nexport let lastEmbedTime = 0;\nexport let embedSchedulerTimer: ReturnType<typeof setInterval> | null = null;\n\n/** True while a vault index pass is running. */\nexport let vaultIndexInProgress = false;\nexport let lastVaultIndexTime = 0;\n\n/** Interval timer of the worker prompt-cache keepalive (null = not armed). */\nexport let cacheKeepaliveTimer: ReturnType<typeof setInterval> | null = null;\n\n// ---------------------------------------------------------------------------\n// Notification state\n// ---------------------------------------------------------------------------\n\n/** Mutable notification config — loaded from disk at startup, patchable at runtime. */\nexport let notificationConfig: NotificationConfig;\n\n// ---------------------------------------------------------------------------\n// Graceful shutdown flag\n// ---------------------------------------------------------------------------\n\n/**\n * Set to true when a SIGTERM/SIGINT is received so that long-running loops\n * (embed, index) can detect the signal and exit their inner loops before the\n * pool/backend is closed.\n */\nexport let shutdownRequested = false;\n\n// ---------------------------------------------------------------------------\n// Setters (TypeScript requires assignment functions for exported `let` vars\n// that need to be mutated across module boundaries)\n// ---------------------------------------------------------------------------\n\nexport function setRegistryDb(db: ReturnType<typeof openRegistry>): void { registryDb = db; }\nexport function setStorageBackend(b: StorageBackend): void { storageBackend = b; }\nexport function setDaemonConfig(c: PaiDaemonConfig): void { daemonConfig = c; }\nexport function setStartTime(t: number): void { startTime = t; }\nexport function setNotificationConfig(c: NotificationConfig): void { notificationConfig = c; }\nexport function setShutdownRequested(v: boolean): void { shutdownRequested = v; }\nexport function setIndexInProgress(v: boolean): void { indexInProgress = v; }\nexport function setLastIndexTime(v: number): void { lastIndexTime = v; }\nexport function setIndexSchedulerTimer(v: ReturnType<typeof setInterval> | null): void { indexSchedulerTimer = v; }\nexport function setEmbedInProgress(v: boolean): void { embedInProgress = v; }\nexport function setLastEmbedTime(v: number): void { lastEmbedTime = v; }\nexport function setEmbedSchedulerTimer(v: ReturnType<typeof setInterval> | null): void { embedSchedulerTimer = v; }\nexport function setVaultIndexInProgress(v: boolean): void { vaultIndexInProgress = v; }\nexport function setLastVaultIndexTime(v: number): void { lastVaultIndexTime = v; }\nexport function setCacheKeepaliveTimer(v: ReturnType<typeof setInterval> | null): void { cacheKeepaliveTimer = v; }\n"],"mappings":";AAaA,IAAW;AACX,IAAW;AACX,IAAW;AACX,IAAW,YAAY,KAAK,KAAK;;AAOjC,IAAW,kBAAkB;AAC7B,IAAW,gBAAgB;AAC3B,IAAW,sBAA6D;;AAGxE,IAAW,kBAAkB;AAC7B,IAAW,gBAAgB;AAC3B,IAAW,sBAA6D;;AAGxE,IAAW,uBAAuB;AAClC,IAAW,qBAAqB;;AAGhC,IAAW,sBAA6D;;AAOxE,IAAW;;;;;;AAWX,IAAW,oBAAoB;AAO/B,SAAgB,cAAc,IAA2C;AAAE,cAAa;;AACxF,SAAgB,kBAAkB,GAAyB;AAAE,kBAAiB;;AAC9E,SAAgB,gBAAgB,GAA0B;AAAE,gBAAe;;AAC3E,SAAgB,aAAa,GAAiB;AAAE,aAAY;;AAC5D,SAAgB,sBAAsB,GAA6B;AAAE,sBAAqB;;AAC1F,SAAgB,qBAAqB,GAAkB;AAAE,qBAAoB;;AAC7E,SAAgB,mBAAmB,GAAkB;AAAE,mBAAkB;;AACzE,SAAgB,iBAAiB,GAAiB;AAAE,iBAAgB;;AACpE,SAAgB,uBAAuB,GAAgD;AAAE,uBAAsB;;AAC/G,SAAgB,mBAAmB,GAAkB;AAAE,mBAAkB;;AACzE,SAAgB,iBAAiB,GAAiB;AAAE,iBAAgB;;AACpE,SAAgB,uBAAuB,GAAgD;AAAE,uBAAsB;;AAC/G,SAAgB,wBAAwB,GAAkB;AAAE,wBAAuB;;AACnF,SAAgB,sBAAsB,GAAiB;AAAE,sBAAqB;;AAC9E,SAAgB,uBAAuB,GAAgD;AAAE,uBAAsB"}

package/dist/sync-Btcb6xA4.mjs

@@ -1,310 +0,0 @@
-import { a as parseSessionTitleChunk, c as yieldToEventLoop, f as sha256File, i as isPathTooBroadForContentScan, l as chunkMarkdown, n as chunkId, o as walkContentFiles, r as detectTier, s as walkMdFiles, t as INDEX_YIELD_EVERY } from "./helpers-crDEr6S2.mjs";
-import { existsSync, readFileSync, statSync } from "node:fs";
-import { basename, join, relative } from "node:path";
-
-//#region src/memory/indexer/sync.ts
-/**
-* Synchronous (SQLite) indexer for the PAI federation memory engine.
-*
-* Scans project memory/ and Notes/ directories, chunks markdown files, and
-* inserts the resulting chunks into federation.db for BM25 search.
-*
-* Change detection: files whose SHA-256 hash has not changed since the last
-* index run are skipped, keeping incremental re-indexing fast.
-*
-* Uses raw better-sqlite3 Database directly for maximum SQLite performance
-* (synchronous transactions, no serialisation overhead).
-*/
-/**
-* Index a single file into the federation database.
-*
-* @returns true if the file was re-indexed (changed or new), false if skipped.
-*/
-function indexFile(db, projectId, rootPath, relativePath, source, tier) {
-	const absPath = join(rootPath, relativePath);
-	let content;
-	let stat;
-	try {
-		content = readFileSync(absPath, "utf8");
-		stat = statSync(absPath);
-	} catch {
-		return false;
-	}
-	const hash = sha256File(content);
-	const mtime = Math.floor(stat.mtimeMs);
-	const size = stat.size;
-	if (db.prepare("SELECT hash FROM memory_files WHERE project_id = ? AND path = ?").get(projectId, relativePath)?.hash === hash) return false;
-	const oldChunkIds = db.prepare("SELECT id FROM memory_chunks WHERE project_id = ? AND path = ?").all(projectId, relativePath);
-	const deleteFts = db.prepare("DELETE FROM memory_fts WHERE id = ?");
-	const deleteChunk = db.prepare("DELETE FROM memory_chunks WHERE project_id = ? AND path = ?");
-	db.transaction(() => {
-		for (const row of oldChunkIds) deleteFts.run(row.id);
-		deleteChunk.run(projectId, relativePath);
-	})();
-	const chunks = chunkMarkdown(content);
-	const insertChunk = db.prepare(`
-    INSERT INTO memory_chunks (id, project_id, source, tier, path, start_line, end_line, hash, text, updated_at)
-    VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
-  `);
-	const insertFts = db.prepare(`
-    INSERT INTO memory_fts (text, id, project_id, path, source, tier, start_line, end_line)
-    VALUES (?, ?, ?, ?, ?, ?, ?, ?)
-  `);
-	const upsertFile = db.prepare(`
-    INSERT INTO memory_files (project_id, path, source, tier, hash, mtime, size)
-    VALUES (?, ?, ?, ?, ?, ?, ?)
-    ON CONFLICT(project_id, path) DO UPDATE SET
-      source = excluded.source,
-      tier   = excluded.tier,
-      hash   = excluded.hash,
-      mtime  = excluded.mtime,
-      size   = excluded.size
-  `);
-	const updatedAt = Date.now();
-	db.transaction(() => {
-		for (let i = 0; i < chunks.length; i++) {
-			const chunk = chunks[i];
-			const id = chunkId(projectId, relativePath, i, chunk.startLine, chunk.endLine);
-			insertChunk.run(id, projectId, source, tier, relativePath, chunk.startLine, chunk.endLine, chunk.hash, chunk.text, updatedAt);
-			insertFts.run(chunk.text, id, projectId, relativePath, source, tier, chunk.startLine, chunk.endLine);
-		}
-		upsertFile.run(projectId, relativePath, source, tier, hash, mtime, size);
-	})();
-	return true;
-}
-/**
-* Index all memory, Notes, and content files for a single registered project.
-*
-* Scans:
-*  - {rootPath}/MEMORY.md    → source='memory', tier='evergreen'
-*  - {rootPath}/memory/      → source='memory', tier from detectTier()
-*  - {rootPath}/Notes/       → source='notes',  tier='session'
-*  - {rootPath}/**\/*.md    → source='content', tier='topic'  (all other .md files, recursive)
-*  - {claudeNotesDir}/       → source='notes',  tier='session'  (if set and different)
-*/
-async function indexProject(db, projectId, rootPath, claudeNotesDir) {
-	const result = {
-		filesProcessed: 0,
-		chunksCreated: 0,
-		filesSkipped: 0
-	};
-	const filesToIndex = [];
-	const rootMemoryMd = join(rootPath, "MEMORY.md");
-	if (existsSync(rootMemoryMd)) filesToIndex.push({
-		absPath: rootMemoryMd,
-		rootBase: rootPath,
-		source: "memory",
-		tier: "evergreen"
-	});
-	const memoryDir = join(rootPath, "memory");
-	for (const absPath of walkMdFiles(memoryDir)) {
-		const tier = detectTier(relative(rootPath, absPath));
-		filesToIndex.push({
-			absPath,
-			rootBase: rootPath,
-			source: "memory",
-			tier
-		});
-	}
-	const notesDir = join(rootPath, "Notes");
-	for (const absPath of walkMdFiles(notesDir)) filesToIndex.push({
-		absPath,
-		rootBase: rootPath,
-		source: "notes",
-		tier: "session"
-	});
-	{
-		const titleInsertChunk = db.prepare(`
-      INSERT OR IGNORE INTO memory_chunks (id, project_id, source, tier, path, start_line, end_line, hash, text, updated_at)
-      VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
-    `);
-		const titleInsertFts = db.prepare(`
-      INSERT OR IGNORE INTO memory_fts (text, id, project_id, path, source, tier, start_line, end_line)
-      VALUES (?, ?, ?, ?, ?, ?, ?, ?)
-    `);
-		const updatedAt = Date.now();
-		for (const absPath of walkMdFiles(notesDir)) {
-			const text = parseSessionTitleChunk(basename(absPath));
-			if (!text) continue;
-			const syntheticPath = `${relative(rootPath, absPath)}::title`;
-			const id = chunkId(projectId, syntheticPath, 0, 0, 0);
-			const hash = sha256File(text);
-			db.transaction(() => {
-				titleInsertChunk.run(id, projectId, "notes", "session", syntheticPath, 0, 0, hash, text, updatedAt);
-				titleInsertFts.run(text, id, projectId, syntheticPath, "notes", "session", 0, 0);
-			})();
-		}
-	}
-	if (!isPathTooBroadForContentScan(rootPath)) for (const absPath of walkContentFiles(rootPath)) filesToIndex.push({
-		absPath,
-		rootBase: rootPath,
-		source: "content",
-		tier: "topic"
-	});
-	if (claudeNotesDir && claudeNotesDir !== notesDir) {
-		for (const absPath of walkMdFiles(claudeNotesDir)) filesToIndex.push({
-			absPath,
-			rootBase: claudeNotesDir,
-			source: "notes",
-			tier: "session"
-		});
-		{
-			const updatedAt = Date.now();
-			const titleInsertChunk2 = db.prepare(`
-        INSERT OR IGNORE INTO memory_chunks (id, project_id, source, tier, path, start_line, end_line, hash, text, updated_at)
-        VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
-      `);
-			const titleInsertFts2 = db.prepare(`
-        INSERT OR IGNORE INTO memory_fts (text, id, project_id, path, source, tier, start_line, end_line)
-        VALUES (?, ?, ?, ?, ?, ?, ?, ?)
-      `);
-			for (const absPath of walkMdFiles(claudeNotesDir)) {
-				const text = parseSessionTitleChunk(basename(absPath));
-				if (!text) continue;
-				const syntheticPath = `${relative(claudeNotesDir, absPath)}::title`;
-				const id = chunkId(projectId, syntheticPath, 0, 0, 0);
-				const hash = sha256File(text);
-				db.transaction(() => {
-					titleInsertChunk2.run(id, projectId, "notes", "session", syntheticPath, 0, 0, hash, text, updatedAt);
-					titleInsertFts2.run(text, id, projectId, syntheticPath, "notes", "session", 0, 0);
-				})();
-			}
-		}
-		if (claudeNotesDir.endsWith("/Notes")) {
-			const claudeProjectDir = claudeNotesDir.slice(0, -6);
-			const claudeMemoryDir = join(claudeProjectDir, "memory");
-			const claudeMemoryMd = join(claudeProjectDir, "MEMORY.md");
-			if (existsSync(claudeMemoryMd)) filesToIndex.push({
-				absPath: claudeMemoryMd,
-				rootBase: claudeProjectDir,
-				source: "memory",
-				tier: "evergreen"
-			});
-			for (const absPath of walkMdFiles(claudeMemoryDir)) {
-				const tier = detectTier(relative(claudeProjectDir, absPath));
-				filesToIndex.push({
-					absPath,
-					rootBase: claudeProjectDir,
-					source: "memory",
-					tier
-				});
-			}
-		}
-	}
-	await yieldToEventLoop();
-	let filesSinceYield = 0;
-	for (const { absPath, rootBase, source, tier } of filesToIndex) {
-		if (filesSinceYield >= INDEX_YIELD_EVERY) {
-			await yieldToEventLoop();
-			filesSinceYield = 0;
-		}
-		filesSinceYield++;
-		const relPath = relative(rootBase, absPath);
-		if (indexFile(db, projectId, rootBase, relPath, source, tier)) {
-			const count = db.prepare("SELECT COUNT(*) as n FROM memory_chunks WHERE project_id = ? AND path = ?").get(projectId, relPath);
-			result.filesProcessed++;
-			result.chunksCreated += count.n;
-		} else result.filesSkipped++;
-	}
-	const livePaths = /* @__PURE__ */ new Set();
-	for (const { absPath, rootBase } of filesToIndex) livePaths.add(relative(rootBase, absPath));
-	const dbChunkPaths = db.prepare("SELECT DISTINCT path FROM memory_chunks WHERE project_id = ?").all(projectId);
-	const stalePaths = [];
-	for (const row of dbChunkPaths) {
-		const basePath = row.path.endsWith("::title") ? row.path.slice(0, -7) : row.path;
-		if (!livePaths.has(basePath)) stalePaths.push(row.path);
-	}
-	if (stalePaths.length > 0) {
-		const deleteChunksFts = db.prepare("DELETE FROM memory_fts WHERE id = ?");
-		const deleteChunks = db.prepare("DELETE FROM memory_chunks WHERE project_id = ? AND path = ?");
-		const deleteFile = db.prepare("DELETE FROM memory_files WHERE project_id = ? AND path = ?");
-		db.transaction(() => {
-			for (const stalePath of stalePaths) {
-				const chunkIds = db.prepare("SELECT id FROM memory_chunks WHERE project_id = ? AND path = ?").all(projectId, stalePath);
-				for (const { id } of chunkIds) deleteChunksFts.run(id);
-				deleteChunks.run(projectId, stalePath);
-				deleteFile.run(projectId, stalePath);
-			}
-		})();
-	}
-	return result;
-}
-/**
-* Index all active projects registered in the registry DB.
-*
-* Async: yields to the event loop between each project so that the daemon's
-* Unix socket server can process IPC requests (e.g. status) while indexing.
-*/
-async function indexAll(db, registryDb) {
-	const projects = registryDb.prepare("SELECT id, root_path, claude_notes_dir FROM projects WHERE status = 'active'").all();
-	const totals = {
-		filesProcessed: 0,
-		chunksCreated: 0,
-		filesSkipped: 0
-	};
-	for (const project of projects) {
-		await yieldToEventLoop();
-		const r = await indexProject(db, project.id, project.root_path, project.claude_notes_dir);
-		totals.filesProcessed += r.filesProcessed;
-		totals.chunksCreated += r.chunksCreated;
-		totals.filesSkipped += r.filesSkipped;
-	}
-	return {
-		projects: projects.length,
-		result: totals
-	};
-}
-/**
-* Generate and store embeddings for chunks that do not yet have one.
-*
-* Because better-sqlite3 is synchronous but the embedding pipeline is async,
-* we fetch all unembedded chunk texts first, generate embeddings in batches,
-* and then write them back in a transaction.
-*
-* @param db         Open federation database.
-* @param projectId  Optional — restrict to a specific project.
-* @param batchSize  Number of chunks to embed per round. Default 50.
-* @param onProgress Optional callback called after each batch with running totals.
-*/
-async function embedChunks(db, projectId, batchSize = 50, onProgress) {
-	const { generateEmbedding, serializeEmbedding } = await import("./embeddings-ClqKtLZ8.mjs");
-	const conditions = ["embedding IS NULL"];
-	const params = [];
-	if (projectId !== void 0) {
-		conditions.push("project_id = ?");
-		params.push(projectId);
-	}
-	const where = "WHERE " + conditions.join(" AND ");
-	const rows = db.prepare(`SELECT id, text FROM memory_chunks ${where} ORDER BY id`).all(...params);
-	if (rows.length === 0) return {
-		chunksEmbedded: 0,
-		chunksSkipped: 0
-	};
-	const updateStmt = db.prepare("UPDATE memory_chunks SET embedding = ? WHERE id = ?");
-	let embedded = 0;
-	const total = rows.length;
-	for (let i = 0; i < rows.length; i += batchSize) {
-		const batch = rows.slice(i, i + batchSize);
-		const embeddings = [];
-		for (const row of batch) {
-			const blob = serializeEmbedding(await generateEmbedding(row.text));
-			embeddings.push({
-				id: row.id,
-				blob
-			});
-		}
-		db.transaction(() => {
-			for (const { id, blob } of embeddings) updateStmt.run(blob, id);
-		})();
-		embedded += embeddings.length;
-		onProgress?.(embedded, total);
-	}
-	return {
-		chunksEmbedded: embedded,
-		chunksSkipped: 0
-	};
-}
-
-//#endregion
-export { indexProject as i, indexAll as n, indexFile as r, embedChunks as t };
-//# sourceMappingURL=sync-Btcb6xA4.mjs.map

package/dist/sync-Btcb6xA4.mjs.map

@@ -1 +0,0 @@
-{"version":3,"file":"sync-Btcb6xA4.mjs","names":[],"sources":["../src/memory/indexer/sync.ts"],"sourcesContent":["/**\n * Synchronous (SQLite) indexer for the PAI federation memory engine.\n *\n * Scans project memory/ and Notes/ directories, chunks markdown files, and\n * inserts the resulting chunks into federation.db for BM25 search.\n *\n * Change detection: files whose SHA-256 hash has not changed since the last\n * index run are skipped, keeping incremental re-indexing fast.\n *\n * Uses raw better-sqlite3 Database directly for maximum SQLite performance\n * (synchronous transactions, no serialisation overhead).\n */\n\nimport { readFileSync, statSync, existsSync } from \"node:fs\";\nimport { join, relative, basename } from \"node:path\";\nimport type { Database } from \"better-sqlite3\";\nimport { chunkMarkdown } from \"../chunker.js\";\nimport {\n  sha256File,\n  chunkId,\n  detectTier,\n  walkMdFiles,\n  walkContentFiles,\n  isPathTooBroadForContentScan,\n  parseSessionTitleChunk,\n  yieldToEventLoop,\n  INDEX_YIELD_EVERY,\n} from \"./helpers.js\";\nimport type { IndexResult, EmbedResult } from \"./types.js\";\n\nexport type { IndexResult, EmbedResult };\n\n// Re-export detectTier for backward-compatibility (consumers import it from indexer.js)\nexport { detectTier };\n\n// ---------------------------------------------------------------------------\n// Single-file indexing\n// ---------------------------------------------------------------------------\n\n/**\n * Index a single file into the federation database.\n *\n * @returns true if the file was re-indexed (changed or new), false if skipped.\n */\nexport function indexFile(\n  db: Database,\n  projectId: number,\n  rootPath: string,\n  relativePath: string,\n  source: string,\n  tier: string,\n): boolean {\n  const absPath = join(rootPath, relativePath);\n\n  // Read file content\n  let content: string;\n  let stat: ReturnType<typeof statSync>;\n  try {\n    content = readFileSync(absPath, \"utf8\");\n    stat = statSync(absPath);\n  } catch {\n    // File unreadable or missing — skip silently\n    return false;\n  }\n\n  const hash = sha256File(content);\n  const mtime = Math.floor(stat.mtimeMs);\n  const size = stat.size;\n\n  // Check if the file has changed since last index\n  const existing = db\n    .prepare(\n      \"SELECT hash FROM memory_files WHERE project_id = ? AND path = ?\",\n    )\n    .get(projectId, relativePath) as { hash: string } | undefined;\n\n  if (existing?.hash === hash) {\n    // Unchanged — skip\n    return false;\n  }\n\n  // Delete old chunks for this file from both tables\n  const oldChunkIds = db\n    .prepare(\n      \"SELECT id FROM memory_chunks WHERE project_id = ? AND path = ?\",\n    )\n    .all(projectId, relativePath) as Array<{ id: string }>;\n\n  const deleteFts = db.prepare(\"DELETE FROM memory_fts WHERE id = ?\");\n  const deleteChunk = db.prepare(\n    \"DELETE FROM memory_chunks WHERE project_id = ? AND path = ?\",\n  );\n\n  db.transaction(() => {\n    for (const row of oldChunkIds) {\n      deleteFts.run(row.id);\n    }\n    deleteChunk.run(projectId, relativePath);\n  })();\n\n  // Chunk the new content\n  const chunks = chunkMarkdown(content);\n\n  // Insert new chunks into memory_chunks and memory_fts\n  const insertChunk = db.prepare(`\n    INSERT INTO memory_chunks (id, project_id, source, tier, path, start_line, end_line, hash, text, updated_at)\n    VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)\n  `);\n\n  const insertFts = db.prepare(`\n    INSERT INTO memory_fts (text, id, project_id, path, source, tier, start_line, end_line)\n    VALUES (?, ?, ?, ?, ?, ?, ?, ?)\n  `);\n\n  const upsertFile = db.prepare(`\n    INSERT INTO memory_files (project_id, path, source, tier, hash, mtime, size)\n    VALUES (?, ?, ?, ?, ?, ?, ?)\n    ON CONFLICT(project_id, path) DO UPDATE SET\n      source = excluded.source,\n      tier   = excluded.tier,\n      hash   = excluded.hash,\n      mtime  = excluded.mtime,\n      size   = excluded.size\n  `);\n\n  const updatedAt = Date.now();\n\n  db.transaction(() => {\n    for (let i = 0; i < chunks.length; i++) {\n      const chunk = chunks[i]!;\n      const id = chunkId(projectId, relativePath, i, chunk.startLine, chunk.endLine);\n      insertChunk.run(\n        id,\n        projectId,\n        source,\n        tier,\n        relativePath,\n        chunk.startLine,\n        chunk.endLine,\n        chunk.hash,\n        chunk.text,\n        updatedAt,\n      );\n      insertFts.run(\n        chunk.text,\n        id,\n        projectId,\n        relativePath,\n        source,\n        tier,\n        chunk.startLine,\n        chunk.endLine,\n      );\n    }\n    upsertFile.run(projectId, relativePath, source, tier, hash, mtime, size);\n  })();\n\n  return true;\n}\n\n// ---------------------------------------------------------------------------\n// Project-level indexing\n// ---------------------------------------------------------------------------\n\n/**\n * Index all memory, Notes, and content files for a single registered project.\n *\n * Scans:\n *  - {rootPath}/MEMORY.md    → source='memory', tier='evergreen'\n *  - {rootPath}/memory/      → source='memory', tier from detectTier()\n *  - {rootPath}/Notes/       → source='notes',  tier='session'\n *  - {rootPath}/**\\/*.md    → source='content', tier='topic'  (all other .md files, recursive)\n *  - {claudeNotesDir}/       → source='notes',  tier='session'  (if set and different)\n */\nexport async function indexProject(\n  db: Database,\n  projectId: number,\n  rootPath: string,\n  claudeNotesDir?: string | null,\n): Promise<IndexResult> {\n  const result: IndexResult = {\n    filesProcessed: 0,\n    chunksCreated: 0,\n    filesSkipped: 0,\n  };\n\n  const filesToIndex: Array<{ absPath: string; rootBase: string; source: string; tier: string }> = [];\n\n  // Root-level MEMORY.md\n  const rootMemoryMd = join(rootPath, \"MEMORY.md\");\n  if (existsSync(rootMemoryMd)) {\n    filesToIndex.push({ absPath: rootMemoryMd, rootBase: rootPath, source: \"memory\", tier: \"evergreen\" });\n  }\n\n  // memory/ directory\n  const memoryDir = join(rootPath, \"memory\");\n  for (const absPath of walkMdFiles(memoryDir)) {\n    const relPath = relative(rootPath, absPath);\n    const tier = detectTier(relPath);\n    filesToIndex.push({ absPath, rootBase: rootPath, source: \"memory\", tier });\n  }\n\n  // {rootPath}/Notes/ directory\n  const notesDir = join(rootPath, \"Notes\");\n  for (const absPath of walkMdFiles(notesDir)) {\n    filesToIndex.push({ absPath, rootBase: rootPath, source: \"notes\", tier: \"session\" });\n  }\n\n  // Synthetic session-title chunks for Notes files with the standard filename format:\n  // \"NNNN - YYYY-MM-DD - Descriptive Title.md\"\n  {\n    const titleInsertChunk = db.prepare(`\n      INSERT OR IGNORE INTO memory_chunks (id, project_id, source, tier, path, start_line, end_line, hash, text, updated_at)\n      VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)\n    `);\n    const titleInsertFts = db.prepare(`\n      INSERT OR IGNORE INTO memory_fts (text, id, project_id, path, source, tier, start_line, end_line)\n      VALUES (?, ?, ?, ?, ?, ?, ?, ?)\n    `);\n    const updatedAt = Date.now();\n    for (const absPath of walkMdFiles(notesDir)) {\n      const fileName = basename(absPath);\n      const text = parseSessionTitleChunk(fileName);\n      if (!text) continue;\n      const relPath = relative(rootPath, absPath);\n      const syntheticPath = `${relPath}::title`;\n      const id = chunkId(projectId, syntheticPath, 0, 0, 0);\n      const hash = sha256File(text);\n      db.transaction(() => {\n        titleInsertChunk.run(id, projectId, \"notes\", \"session\", syntheticPath, 0, 0, hash, text, updatedAt);\n        titleInsertFts.run(text, id, projectId, syntheticPath, \"notes\", \"session\", 0, 0);\n      })();\n    }\n  }\n\n  // {rootPath}/**/*.md — all other markdown content\n  if (!isPathTooBroadForContentScan(rootPath)) {\n    for (const absPath of walkContentFiles(rootPath)) {\n      filesToIndex.push({ absPath, rootBase: rootPath, source: \"content\", tier: \"topic\" });\n    }\n  }\n\n  // Claude Code session notes directory (~/.claude/projects/{encoded}/Notes/)\n  if (claudeNotesDir && claudeNotesDir !== notesDir) {\n    for (const absPath of walkMdFiles(claudeNotesDir)) {\n      filesToIndex.push({ absPath, rootBase: claudeNotesDir, source: \"notes\", tier: \"session\" });\n    }\n\n    // Synthetic title chunks for claude notes dir\n    {\n      const updatedAt = Date.now();\n      const titleInsertChunk2 = db.prepare(`\n        INSERT OR IGNORE INTO memory_chunks (id, project_id, source, tier, path, start_line, end_line, hash, text, updated_at)\n        VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?)\n      `);\n      const titleInsertFts2 = db.prepare(`\n        INSERT OR IGNORE INTO memory_fts (text, id, project_id, path, source, tier, start_line, end_line)\n        VALUES (?, ?, ?, ?, ?, ?, ?, ?)\n      `);\n      for (const absPath of walkMdFiles(claudeNotesDir)) {\n        const fileName = basename(absPath);\n        const text = parseSessionTitleChunk(fileName);\n        if (!text) continue;\n        const relPath = relative(claudeNotesDir, absPath);\n        const syntheticPath = `${relPath}::title`;\n        const id = chunkId(projectId, syntheticPath, 0, 0, 0);\n        const hash = sha256File(text);\n        db.transaction(() => {\n          titleInsertChunk2.run(id, projectId, \"notes\", \"session\", syntheticPath, 0, 0, hash, text, updatedAt);\n          titleInsertFts2.run(text, id, projectId, syntheticPath, \"notes\", \"session\", 0, 0);\n        })();\n      }\n    }\n\n    // Derive the sibling memory/ directory: .../Notes/ → .../memory/\n    if (claudeNotesDir.endsWith(\"/Notes\")) {\n      const claudeProjectDir = claudeNotesDir.slice(0, -\"/Notes\".length);\n      const claudeMemoryDir = join(claudeProjectDir, \"memory\");\n\n      const claudeMemoryMd = join(claudeProjectDir, \"MEMORY.md\");\n      if (existsSync(claudeMemoryMd)) {\n        filesToIndex.push({\n          absPath: claudeMemoryMd,\n          rootBase: claudeProjectDir,\n          source: \"memory\",\n          tier: \"evergreen\",\n        });\n      }\n\n      for (const absPath of walkMdFiles(claudeMemoryDir)) {\n        const relPath = relative(claudeProjectDir, absPath);\n        const tier = detectTier(relPath);\n        filesToIndex.push({ absPath, rootBase: claudeProjectDir, source: \"memory\", tier });\n      }\n    }\n  }\n\n  // Yield after collection phase before processing\n  await yieldToEventLoop();\n\n  let filesSinceYield = 0;\n\n  for (const { absPath, rootBase, source, tier } of filesToIndex) {\n    if (filesSinceYield >= INDEX_YIELD_EVERY) {\n      await yieldToEventLoop();\n      filesSinceYield = 0;\n    }\n    filesSinceYield++;\n\n    const relPath = relative(rootBase, absPath);\n    const changed = indexFile(db, projectId, rootBase, relPath, source, tier);\n\n    if (changed) {\n      const count = db\n        .prepare(\n          \"SELECT COUNT(*) as n FROM memory_chunks WHERE project_id = ? AND path = ?\",\n        )\n        .get(projectId, relPath) as { n: number };\n\n      result.filesProcessed++;\n      result.chunksCreated += count.n;\n    } else {\n      result.filesSkipped++;\n    }\n  }\n\n  // Prune stale paths: remove DB entries for files that no longer exist on disk.\n  const livePaths = new Set<string>();\n  for (const { absPath, rootBase } of filesToIndex) {\n    livePaths.add(relative(rootBase, absPath));\n  }\n\n  const dbChunkPaths = db\n    .prepare(\"SELECT DISTINCT path FROM memory_chunks WHERE project_id = ?\")\n    .all(projectId) as Array<{ path: string }>;\n\n  const stalePaths: string[] = [];\n  for (const row of dbChunkPaths) {\n    const basePath = row.path.endsWith(\"::title\")\n      ? row.path.slice(0, -\"::title\".length)\n      : row.path;\n    if (!livePaths.has(basePath)) {\n      stalePaths.push(row.path);\n    }\n  }\n\n  if (stalePaths.length > 0) {\n    const deleteChunksFts = db.prepare(\"DELETE FROM memory_fts WHERE id = ?\");\n    const deleteChunks = db.prepare(\n      \"DELETE FROM memory_chunks WHERE project_id = ? AND path = ?\",\n    );\n    const deleteFile = db.prepare(\n      \"DELETE FROM memory_files WHERE project_id = ? AND path = ?\",\n    );\n\n    db.transaction(() => {\n      for (const stalePath of stalePaths) {\n        const chunkIds = db\n          .prepare(\"SELECT id FROM memory_chunks WHERE project_id = ? AND path = ?\")\n          .all(projectId, stalePath) as Array<{ id: string }>;\n        for (const { id } of chunkIds) {\n          deleteChunksFts.run(id);\n        }\n        deleteChunks.run(projectId, stalePath);\n        deleteFile.run(projectId, stalePath);\n      }\n    })();\n  }\n\n  return result;\n}\n\n// ---------------------------------------------------------------------------\n// Global indexing (all registered projects)\n// ---------------------------------------------------------------------------\n\n/**\n * Index all active projects registered in the registry DB.\n *\n * Async: yields to the event loop between each project so that the daemon's\n * Unix socket server can process IPC requests (e.g. status) while indexing.\n */\nexport async function indexAll(\n  db: Database,\n  registryDb: Database,\n): Promise<{ projects: number; result: IndexResult }> {\n  const projects = registryDb\n    .prepare(\"SELECT id, root_path, claude_notes_dir FROM projects WHERE status = 'active'\")\n    .all() as Array<{ id: number; root_path: string; claude_notes_dir: string | null }>;\n\n  const totals: IndexResult = {\n    filesProcessed: 0,\n    chunksCreated: 0,\n    filesSkipped: 0,\n  };\n\n  for (const project of projects) {\n    await yieldToEventLoop();\n    const r = await indexProject(db, project.id, project.root_path, project.claude_notes_dir);\n    totals.filesProcessed += r.filesProcessed;\n    totals.chunksCreated += r.chunksCreated;\n    totals.filesSkipped += r.filesSkipped;\n  }\n\n  return { projects: projects.length, result: totals };\n}\n\n// ---------------------------------------------------------------------------\n// Embedding generation\n// ---------------------------------------------------------------------------\n\n/**\n * Generate and store embeddings for chunks that do not yet have one.\n *\n * Because better-sqlite3 is synchronous but the embedding pipeline is async,\n * we fetch all unembedded chunk texts first, generate embeddings in batches,\n * and then write them back in a transaction.\n *\n * @param db         Open federation database.\n * @param projectId  Optional — restrict to a specific project.\n * @param batchSize  Number of chunks to embed per round. 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WHERE id = ?\",\n  );\n\n  let embedded = 0;\n  const total = rows.length;\n\n  for (let i = 0; i < rows.length; i += batchSize) {\n    const batch = rows.slice(i, i + batchSize);\n\n    // Generate embeddings for the batch (async — must happen OUTSIDE transaction)\n    const embeddings: Array<{ id: string; blob: Buffer }> = [];\n    for (const row of batch) {\n      const vec = await generateEmbedding(row.text);\n      const blob = serializeEmbedding(vec);\n      embeddings.push({ id: row.id, blob });\n    }\n\n    // Write the batch in a single transaction\n    db.transaction(() => {\n      for (const { id, blob } of embeddings) {\n        updateStmt.run(blob, id);\n      }\n    })();\n\n    embedded += embeddings.length;\n    onProgress?.(embedded, total);\n  }\n\n  return { chunksEmbedded: embedded, chunksSkipped: 0 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