@tekmidian/pai 0.31.0 → 0.32.1

package/dist/{postgres-DTyxU4B1.mjs → postgres-5IpjMwo_.mjs}

@@ -36,6 +36,29 @@ function buildPgTsQuery(query) {
 //#endregion
 //#region src/storage/postgres/search.ts
 /**
+* A failed search must not look like a search that found nothing.
+*
+* Both functions below used to catch, log to stderr, and `return []`. The log goes
+* to the daemon's own stderr, which no caller ever sees, so an unreachable backend
+* and a genuine miss were BYTE-IDENTICAL at the call site — `memory_search`
+* reported "No results found for query: …" either way.
+*
+* That cost a real wrong answer on 2026-08-04. `pai-pgvector` exited at 13:39Z and
+* the index lived inside it; for the next two hours every memory_search returned
+* cleanly empty. A sibling session searched for an open DMARC point, got nothing,
+* and told Matthias nothing was recorded. The search had run against a dead
+* backend and was worthless — and nothing in the reply could have revealed that.
+*
+* So: throw. The MCP shim already turns a thrown error into a visible message, and
+* an error the user can act on beats an empty result they cannot distinguish from
+* the truth. This deliberately makes transient failures noisier — that is the
+* trade, and it is the right way round.
+*/
+function searchFailure(kind, cause) {
+	const detail = cause instanceof Error ? cause.message : String(cause);
+	return /* @__PURE__ */ new Error(`Postgres ${kind} search failed — the memory index is unreachable, so this is NOT an empty result set. Check the backend is up (docker start pai-pgvector) and see pai daemon status. Cause: ${detail}`);
+}
+/**
 * Full-text keyword search using Postgres tsvector/tsquery with 'simple' dictionary.
 */
 async function searchKeyword(pool, query, opts) {
@@ -90,7 +113,7 @@ async function searchKeyword(pool, query, opts) {
 		}));
 	} catch (e) {
 		process.stderr.write(`[pai-postgres] searchKeyword error: ${e}\n`);
-		return [];
+		throw searchFailure("keyword", e);
 	}
 }
 /**
@@ -151,7 +174,7 @@ async function searchSemantic(pool, queryEmbedding, opts) {
 		})).filter((r) => r.score >= minScore);
 	} catch (e) {
 		process.stderr.write(`[pai-postgres] searchSemantic error: ${e}\n`);
-		return [];
+		throw searchFailure("semantic", e);
 	}
 }
 
@@ -888,4 +911,4 @@ var PostgresBackend = class PostgresBackend {
 
 //#endregion
 export { PostgresBackend };
-//# sourceMappingURL=postgres-DTyxU4B1.mjs.map
+//# sourceMappingURL=postgres-5IpjMwo_.mjs.map

package/dist/postgres-5IpjMwo_.mjs.map

@@ -0,0 +1 @@
+{"version":3,"file":"postgres-5IpjMwo_.mjs","names":["vault.upsertVaultFile","vault.deleteVaultFile","vault.getVaultFile","vault.getVaultFileByInode","vault.getAllVaultFiles","vault.getRecentVaultFiles","vault.countVaultFiles","vault.countVaultFilesWithPrefix","vault.countVaultFilesAfter","vault.getVaultFilesByPaths","vault.getVaultFilesByPathsAfter","vault.getAllVaultFilePaths","vault.getVaultFilePathsWithPrefix","vault.getVaultFilePathsAfter","vault.upsertVaultAliases","vault.deleteVaultAliases","vault.getVaultAlias","vault.replaceLinksForSources","vault.getLinksFromSource","vault.getLinksToTarget","vault.getVaultLinkGraph","vault.getDeadLinks","vault.getDeadLinksWithLineNumbers","vault.getDeadLinksWithPrefix","vault.getDeadLinksAfter","vault.countVaultLinksWithPrefix","vault.countVaultLinksAfter","vault.getVaultLinksFromPaths","vault.getVaultLinkEdges","vault.getVaultLinkEdgesWithPrefix","vault.getVaultLinkEdgesAfter","vault.upsertVaultHealth","vault.getVaultHealth","vault.getOrphans","vault.getOrphansWithPrefix","vault.getOrphansAfter","vault.getLowConnectivity","vault.getLowConnectivityWithPrefix","vault.getLowConnectivityAfter","vault.upsertNameIndex","vault.replaceNameIndex","vault.resolveVaultName","vault.searchVaultNameIndex"],"sources":["../src/storage/postgres/helpers.ts","../src/storage/postgres/search.ts","../src/storage/postgres/vault.ts","../src/storage/postgres/backend.ts"],"sourcesContent":["/**\n * Internal helper utilities for the Postgres storage backend.\n */\n\nimport { STOP_WORDS } from \"../../utils/stop-words.js\";\n\n/**\n * Convert a Buffer of Float32 LE bytes (as stored in SQLite) to number[].\n */\nexport function bufferToVector(buf: Buffer): number[] {\n  const floats: number[] = [];\n  for (let i = 0; i < buf.length; i += 4) {\n    floats.push(buf.readFloatLE(i));\n  }\n  return floats;\n}\n\n/**\n * Convert a free-text query to a Postgres tsquery string.\n *\n * Uses OR (|) semantics so that a chunk matching ANY query term is returned,\n * ranked by ts_rank (which scores higher when more terms match). AND (&)\n * semantics are too strict for multi-word queries because all terms rarely\n * co-occur in a single chunk.\n *\n * Example: \"Synchrotech interview follow-up Gilles\"\n *   → \"synchrotech | interview | follow | gilles\"\n */\nexport function buildPgTsQuery(query: string): string {\n  const tokens = query\n    .toLowerCase()\n    .split(/[\\s\\p{P}]+/u)\n    .filter(Boolean)\n    .filter((t) => t.length >= 2)\n    .filter((t) => !STOP_WORDS.has(t))\n    // Sanitize: strip tsquery special characters to prevent syntax errors\n    .map((t) => t.replace(/'/g, \"''\").replace(/[&|!():]/g, \"\"))\n    .filter(Boolean);\n\n  if (tokens.length === 0) {\n    const raw = query.replace(/[^a-z0-9]/gi, \" \").trim().split(/\\s+/).filter(Boolean).join(\" | \");\n    return raw || \"\";\n  }\n\n  return tokens.join(\" | \");\n}\n","/**\n * Keyword and semantic search implementations for the Postgres backend.\n * Functions take a `pool` parameter so they can be called from PostgresBackend methods.\n */\n\nimport type { Pool } from \"pg\";\nimport type { SearchResult, SearchOptions } from \"../../memory/search.js\";\nimport { buildPgTsQuery } from \"./helpers.js\";\n\n/**\n * A failed search must not look like a search that found nothing.\n *\n * Both functions below used to catch, log to stderr, and `return []`. The log goes\n * to the daemon's own stderr, which no caller ever sees, so an unreachable backend\n * and a genuine miss were BYTE-IDENTICAL at the call site — `memory_search`\n * reported \"No results found for query: …\" either way.\n *\n * That cost a real wrong answer on 2026-08-04. `pai-pgvector` exited at 13:39Z and\n * the index lived inside it; for the next two hours every memory_search returned\n * cleanly empty. A sibling session searched for an open DMARC point, got nothing,\n * and told Matthias nothing was recorded. The search had run against a dead\n * backend and was worthless — and nothing in the reply could have revealed that.\n *\n * So: throw. The MCP shim already turns a thrown error into a visible message, and\n * an error the user can act on beats an empty result they cannot distinguish from\n * the truth. This deliberately makes transient failures noisier — that is the\n * trade, and it is the right way round.\n */\nfunction searchFailure(kind: \"keyword\" | \"semantic\", cause: unknown): Error {\n  const detail = cause instanceof Error ? cause.message : String(cause);\n  return new Error(\n    `Postgres ${kind} search failed — the memory index is unreachable, ` +\n      `so this is NOT an empty result set. Check the backend is up ` +\n      `(docker start pai-pgvector) and see pai daemon status. Cause: ${detail}`\n  );\n}\n\n/**\n * Full-text keyword search using Postgres tsvector/tsquery with 'simple' dictionary.\n */\nexport async function searchKeyword(\n  pool: Pool,\n  query: string,\n  opts?: SearchOptions\n): Promise<SearchResult[]> {\n  const maxResults = opts?.maxResults ?? 10;\n\n  const tsQuery = buildPgTsQuery(query);\n  if (!tsQuery) return [];\n\n  const conditions: string[] = [\"fts_vector @@ to_tsquery('simple', $1)\"];\n  const params: (string | number)[] = [tsQuery];\n  let paramIdx = 2;\n\n  if (opts?.projectIds && opts.projectIds.length > 0) {\n    const placeholders = opts.projectIds.map(() => `$${paramIdx++}`).join(\", \");\n    conditions.push(`project_id IN (${placeholders})`);\n    params.push(...opts.projectIds);\n  }\n\n  if (opts?.sources && opts.sources.length > 0) {\n    const placeholders = opts.sources.map(() => `$${paramIdx++}`).join(\", \");\n    conditions.push(`source IN (${placeholders})`);\n    params.push(...opts.sources);\n  }\n\n  if (opts?.tiers && opts.tiers.length > 0) {\n    const placeholders = opts.tiers.map(() => `$${paramIdx++}`).join(\", \");\n    conditions.push(`tier IN (${placeholders})`);\n    params.push(...opts.tiers);\n  }\n\n  params.push(maxResults);\n  const limitParam = `$${paramIdx}`;\n\n  const sql = `\n    SELECT\n      project_id,\n      path,\n      start_line,\n      end_line,\n      text AS snippet,\n      tier,\n      source,\n      ts_rank(fts_vector, to_tsquery('simple', $1)) AS rank_score\n    FROM pai_chunks\n    WHERE ${conditions.join(\" AND \")}\n    ORDER BY rank_score DESC\n    LIMIT ${limitParam}\n  `;\n\n  try {\n    const result = await pool.query<{\n      project_id: number;\n      path: string;\n      start_line: number;\n      end_line: number;\n      snippet: string;\n      tier: string;\n      source: string;\n      rank_score: number;\n    }>(sql, params);\n\n    return result.rows.map((row) => ({\n      projectId: row.project_id,\n      path: row.path,\n      startLine: row.start_line,\n      endLine: row.end_line,\n      snippet: row.snippet,\n      score: row.rank_score,\n      tier: row.tier,\n      source: row.source,\n    }));\n  } catch (e) {\n    process.stderr.write(`[pai-postgres] searchKeyword error: ${e}\\n`);\n    throw searchFailure(\"keyword\", e);\n  }\n}\n\n/**\n * Semantic vector similarity search using pgvector cosine distance (<=>).\n */\nexport async function searchSemantic(\n  pool: Pool,\n  queryEmbedding: Float32Array,\n  opts?: SearchOptions\n): Promise<SearchResult[]> {\n  const maxResults = opts?.maxResults ?? 10;\n\n  const conditions: string[] = [\"embedding IS NOT NULL\"];\n  const params: (string | number)[] = [];\n  let paramIdx = 1;\n\n  const vecStr = \"[\" + Array.from(queryEmbedding).join(\",\") + \"]\";\n  params.push(vecStr);\n  const vecParam = `$${paramIdx++}`;\n\n  if (opts?.projectIds && opts.projectIds.length > 0) {\n    const placeholders = opts.projectIds.map(() => `$${paramIdx++}`).join(\", \");\n    conditions.push(`project_id IN (${placeholders})`);\n    params.push(...opts.projectIds);\n  }\n\n  if (opts?.sources && opts.sources.length > 0) {\n    const placeholders = opts.sources.map(() => `$${paramIdx++}`).join(\", \");\n    conditions.push(`source IN (${placeholders})`);\n    params.push(...opts.sources);\n  }\n\n  if (opts?.tiers && opts.tiers.length > 0) {\n    const placeholders = opts.tiers.map(() => `$${paramIdx++}`).join(\", \");\n    conditions.push(`tier IN (${placeholders})`);\n    params.push(...opts.tiers);\n  }\n\n  params.push(maxResults);\n  const limitParam = `$${paramIdx}`;\n\n  // <=> is cosine distance; 1 - distance = cosine similarity\n  const sql = `\n    SELECT\n      project_id,\n      path,\n      start_line,\n      end_line,\n      text AS snippet,\n      tier,\n      source,\n      1 - (embedding <=> ${vecParam}::vector) AS cosine_similarity\n    FROM pai_chunks\n    WHERE ${conditions.join(\" AND \")}\n    ORDER BY embedding <=> ${vecParam}::vector\n    LIMIT ${limitParam}\n  `;\n\n  try {\n    const result = await pool.query<{\n      project_id: number;\n      path: string;\n      start_line: number;\n      end_line: number;\n      snippet: string;\n      tier: string;\n      source: string;\n      cosine_similarity: number;\n    }>(sql, params);\n\n    const minScore = opts?.minScore ?? -Infinity;\n\n    return result.rows\n      .map((row) => ({\n        projectId: row.project_id,\n        path: row.path,\n        startLine: row.start_line,\n        endLine: row.end_line,\n        snippet: row.snippet,\n        score: row.cosine_similarity,\n        tier: row.tier,\n        source: row.source,\n      }))\n      .filter((r) => r.score >= minScore);\n  } catch (e) {\n    process.stderr.write(`[pai-postgres] searchSemantic error: ${e}\\n`);\n    throw searchFailure(\"semantic\", e);\n  }\n}\n","/**\n * Vault storage operations for the Postgres backend.\n * All functions take a `pool` parameter — called from PostgresBackend methods.\n */\n\nimport type { Pool } from \"pg\";\nimport type {\n  VaultFileRow, VaultAliasRow, VaultLinkRow, VaultHealthRow, VaultNameEntry,\n} from \"../interface.js\";\n\n// ---------------------------------------------------------------------------\n// Vault files\n// ---------------------------------------------------------------------------\n\nexport async function upsertVaultFile(pool: Pool, file: VaultFileRow): Promise<void> {\n  await pool.query(\n    `INSERT INTO vault_files (vault_path, inode, device, hash, title, indexed_at)\n     VALUES ($1, $2, $3, $4, $5, $6)\n     ON CONFLICT (vault_path) DO UPDATE SET\n       inode = EXCLUDED.inode, device = EXCLUDED.device,\n       hash = EXCLUDED.hash, title = EXCLUDED.title,\n       indexed_at = EXCLUDED.indexed_at`,\n    [file.vaultPath, file.inode, file.device, file.hash, file.title, file.indexedAt]\n  );\n}\n\nexport async function deleteVaultFile(pool: Pool, vaultPath: string): Promise<void> {\n  const client = await pool.connect();\n  try {\n    await client.query(\"BEGIN\");\n    await client.query(\"DELETE FROM vault_links WHERE source_path = $1\", [vaultPath]);\n    await client.query(\"DELETE FROM vault_health WHERE vault_path = $1\", [vaultPath]);\n    await client.query(\"DELETE FROM vault_name_index WHERE vault_path = $1\", [vaultPath]);\n    await client.query(\"DELETE FROM vault_aliases WHERE vault_path = $1 OR canonical_path = $1\", [vaultPath]);\n    await client.query(\"DELETE FROM vault_files WHERE vault_path = $1\", [vaultPath]);\n    await client.query(\"COMMIT\");\n  } catch (e) {\n    await client.query(\"ROLLBACK\");\n    throw e;\n  } finally {\n    client.release();\n  }\n}\n\ntype VaultFileDbRow = { vault_path: string; inode: string; device: string; hash: string; title: string | null; indexed_at: string };\n\nfunction mapVaultFileRow(row: VaultFileDbRow): VaultFileRow {\n  return {\n    vaultPath: row.vault_path,\n    inode: Number(row.inode),\n    device: Number(row.device),\n    hash: row.hash,\n    title: row.title,\n    indexedAt: Number(row.indexed_at),\n  };\n}\n\nexport async function getVaultFile(pool: Pool, vaultPath: string): Promise<VaultFileRow | null> {\n  const r = await pool.query<VaultFileDbRow>(\n    \"SELECT vault_path, inode, device, hash, title, indexed_at FROM vault_files WHERE vault_path = $1\",\n    [vaultPath]\n  );\n  return r.rows.length === 0 ? null : mapVaultFileRow(r.rows[0]);\n}\n\nexport async function getVaultFileByInode(pool: Pool, inode: number, device: number): Promise<VaultFileRow | null> {\n  const r = await pool.query<VaultFileDbRow>(\n    \"SELECT vault_path, inode, device, hash, title, indexed_at FROM vault_files WHERE inode = $1 AND device = $2 LIMIT 1\",\n    [inode, device]\n  );\n  return r.rows.length === 0 ? null : mapVaultFileRow(r.rows[0]);\n}\n\nexport async function getAllVaultFiles(pool: Pool): Promise<VaultFileRow[]> {\n  const r = await pool.query<VaultFileDbRow>(\"SELECT vault_path, inode, device, hash, title, indexed_at FROM vault_files\");\n  return r.rows.map(mapVaultFileRow);\n}\n\nexport async function getRecentVaultFiles(pool: Pool, sinceMs: number): Promise<VaultFileRow[]> {\n  const r = await pool.query<VaultFileDbRow>(\n    \"SELECT vault_path, inode, device, hash, title, indexed_at FROM vault_files WHERE indexed_at > $1\",\n    [sinceMs]\n  );\n  return r.rows.map(mapVaultFileRow);\n}\n\nexport async function countVaultFiles(pool: Pool): Promise<number> {\n  const r = await pool.query<{ n: string }>(\"SELECT COUNT(*)::text AS n FROM vault_files\");\n  return parseInt(r.rows[0]?.n ?? \"0\", 10);\n}\n\nexport async function countVaultFilesWithPrefix(pool: Pool, prefix: string): Promise<number> {\n  const r = await pool.query<{ n: string }>(\"SELECT COUNT(*) AS n FROM vault_files WHERE vault_path LIKE $1\", [`${prefix}%`]);\n  return Number(r.rows[0]?.n ?? 0);\n}\n\nexport async function countVaultFilesAfter(pool: Pool, sinceMs: number): Promise<number> {\n  const r = await pool.query<{ n: string }>(\"SELECT COUNT(*) AS n FROM vault_files WHERE indexed_at > $1\", [sinceMs]);\n  return Number(r.rows[0]?.n ?? 0);\n}\n\nexport async function getVaultFilesByPaths(pool: Pool, paths: string[]): Promise<VaultFileRow[]> {\n  if (paths.length === 0) return [];\n  const placeholders = paths.map((_, i) => `$${i + 1}`).join(\", \");\n  const r = await pool.query<VaultFileDbRow>(\n    `SELECT vault_path, inode, device, hash, title, indexed_at FROM vault_files WHERE vault_path IN (${placeholders})`,\n    paths\n  );\n  return r.rows.map(mapVaultFileRow);\n}\n\nexport async function getVaultFilesByPathsAfter(pool: Pool, paths: string[], sinceMs: number): Promise<VaultFileRow[]> {\n  if (paths.length === 0) return [];\n  const placeholders = paths.map((_, i) => `$${i + 1}`).join(\", \");\n  const r = await pool.query<VaultFileDbRow>(\n    `SELECT vault_path, inode, device, hash, title, indexed_at FROM vault_files WHERE vault_path IN (${placeholders}) AND indexed_at >= $${paths.length + 1} ORDER BY indexed_at ASC`,\n    [...paths, sinceMs]\n  );\n  return r.rows.map(mapVaultFileRow);\n}\n\nexport async function getAllVaultFilePaths(pool: Pool): Promise<string[]> {\n  const r = await pool.query<{ vault_path: string }>(\"SELECT vault_path FROM vault_files\");\n  return r.rows.map(row => row.vault_path);\n}\n\nexport async function getVaultFilePathsWithPrefix(pool: Pool, prefix: string): Promise<string[]> {\n  const r = await pool.query<{ vault_path: string }>(\n    \"SELECT vault_path FROM vault_files WHERE vault_path LIKE $1\",\n    [`${prefix}%`]\n  );\n  return r.rows.map(row => row.vault_path);\n}\n\nexport async function getVaultFilePathsAfter(pool: Pool, sinceMs: number): Promise<string[]> {\n  const r = await pool.query<{ vault_path: string }>(\n    \"SELECT vault_path FROM vault_files WHERE indexed_at > $1\",\n    [sinceMs]\n  );\n  return r.rows.map(row => row.vault_path);\n}\n\n// ---------------------------------------------------------------------------\n// Vault aliases\n// ---------------------------------------------------------------------------\n\nexport async function upsertVaultAliases(pool: Pool, aliases: VaultAliasRow[]): Promise<void> {\n  if (aliases.length === 0) return;\n  const client = await pool.connect();\n  try {\n    await client.query(\"BEGIN\");\n    for (const a of aliases) {\n      await client.query(\n        `INSERT INTO vault_aliases (vault_path, canonical_path, inode, device)\n         VALUES ($1, $2, $3, $4)\n         ON CONFLICT (vault_path) DO UPDATE SET\n           canonical_path = EXCLUDED.canonical_path,\n           inode = EXCLUDED.inode, device = EXCLUDED.device`,\n        [a.vaultPath, a.canonicalPath, a.inode, a.device]\n      );\n    }\n    await client.query(\"COMMIT\");\n  } catch (e) {\n    await client.query(\"ROLLBACK\");\n    throw e;\n  } finally {\n    client.release();\n  }\n}\n\nexport async function deleteVaultAliases(pool: Pool, canonicalPath: string): Promise<void> {\n  await pool.query(\"DELETE FROM vault_aliases WHERE canonical_path = $1\", [canonicalPath]);\n}\n\nexport async function getVaultAlias(pool: Pool, vaultPath: string): Promise<{ canonicalPath: string } | null> {\n  const r = await pool.query<{ canonical_path: string }>(\n    \"SELECT canonical_path FROM vault_aliases WHERE vault_path = $1\",\n    [vaultPath]\n  );\n  return r.rows.length > 0 ? { canonicalPath: r.rows[0].canonical_path } : null;\n}\n\n// ---------------------------------------------------------------------------\n// Vault links\n// ---------------------------------------------------------------------------\n\ntype VaultLinkDbRow = { source_path: string; target_raw: string; target_path: string | null; link_type: string; line_number: number; confidence?: string };\n\nfunction mapVaultLinkRow(row: VaultLinkDbRow): VaultLinkRow {\n  return {\n    sourcePath: row.source_path,\n    targetRaw: row.target_raw,\n    targetPath: row.target_path,\n    linkType: row.link_type,\n    lineNumber: row.line_number,\n    confidence: (row.confidence as VaultLinkRow[\"confidence\"]) ?? \"EXTRACTED\",\n  };\n}\n\nexport async function replaceLinksForSources(pool: Pool, sourcePaths: string[], links: VaultLinkRow[]): Promise<void> {\n  const client = await pool.connect();\n  try {\n    await client.query(\"BEGIN\");\n    if (sourcePaths.length > 0) {\n      await client.query(\n        \"DELETE FROM vault_links WHERE source_path = ANY($1::text[])\",\n        [sourcePaths]\n      );\n    }\n    for (let i = 0; i < links.length; i += 500) {\n      const batch = links.slice(i, i + 500);\n      const values: string[] = [];\n      const params: (string | number | null)[] = [];\n      let idx = 1;\n      for (const l of batch) {\n        values.push(`($${idx++}, $${idx++}, $${idx++}, $${idx++}, $${idx++}, $${idx++})`);\n        params.push(l.sourcePath, l.targetRaw, l.targetPath, l.linkType, l.lineNumber, l.confidence ?? \"EXTRACTED\");\n      }\n      await client.query(\n        `INSERT INTO vault_links (source_path, target_raw, target_path, link_type, line_number, confidence)\n         VALUES ${values.join(\", \")}\n         ON CONFLICT (source_path, target_raw, line_number) DO UPDATE SET\n           target_path = EXCLUDED.target_path, link_type = EXCLUDED.link_type,\n           confidence = EXCLUDED.confidence`,\n        params\n      );\n    }\n    await client.query(\"COMMIT\");\n  } catch (e) {\n    await client.query(\"ROLLBACK\");\n    throw e;\n  } finally {\n    client.release();\n  }\n}\n\nexport async function getLinksFromSource(pool: Pool, sourcePath: string): Promise<VaultLinkRow[]> {\n  const r = await pool.query<VaultLinkDbRow>(\n    \"SELECT source_path, target_raw, target_path, link_type, line_number, confidence FROM vault_links WHERE source_path = $1\",\n    [sourcePath]\n  );\n  return r.rows.map(mapVaultLinkRow);\n}\n\nexport async function getLinksToTarget(pool: Pool, targetPath: string): Promise<VaultLinkRow[]> {\n  const r = await pool.query<VaultLinkDbRow>(\n    \"SELECT source_path, target_raw, target_path, link_type, line_number, confidence FROM vault_links WHERE target_path = $1\",\n    [targetPath]\n  );\n  return r.rows.map(mapVaultLinkRow);\n}\n\nexport async function getVaultLinkGraph(pool: Pool): Promise<Array<{ source_path: string; target_path: string }>> {\n  const r = await pool.query<{ source_path: string; target_path: string }>(\n    \"SELECT source_path, target_path FROM vault_links WHERE target_path IS NOT NULL\"\n  );\n  return r.rows;\n}\n\nexport async function getDeadLinks(pool: Pool): Promise<Array<{ sourcePath: string; targetRaw: string }>> {\n  const r = await pool.query<{ source_path: string; target_raw: string }>(\n    \"SELECT source_path, target_raw FROM vault_links WHERE target_path IS NULL\"\n  );\n  return r.rows.map(row => ({ sourcePath: row.source_path, targetRaw: row.target_raw }));\n}\n\nexport async function getDeadLinksWithLineNumbers(pool: Pool): Promise<Array<{ sourcePath: string; targetRaw: string; lineNumber: number }>> {\n  const r = await pool.query<{ source_path: string; target_raw: string; line_number: number }>(\n    \"SELECT source_path, target_raw, line_number FROM vault_links WHERE target_path IS NULL\"\n  );\n  return r.rows.map(row => ({ sourcePath: row.source_path, targetRaw: row.target_raw, lineNumber: row.line_number }));\n}\n\nexport async function getDeadLinksWithPrefix(pool: Pool, prefix: string): Promise<Array<{ sourcePath: string; targetRaw: string; lineNumber: number }>> {\n  const r = await pool.query<{ source_path: string; target_raw: string; line_number: number }>(\n    \"SELECT source_path, target_raw, line_number FROM vault_links WHERE target_path IS NULL AND source_path LIKE $1\",\n    [`${prefix}%`]\n  );\n  return r.rows.map(row => ({ sourcePath: row.source_path, targetRaw: row.target_raw, lineNumber: row.line_number }));\n}\n\nexport async function getDeadLinksAfter(pool: Pool, sinceMs: number): Promise<Array<{ sourcePath: string; targetRaw: string; lineNumber: number }>> {\n  const r = await pool.query<{ source_path: string; target_raw: string; line_number: number }>(\n    \"SELECT source_path, target_raw, line_number FROM vault_links WHERE target_path IS NULL AND source_path IN (SELECT vault_path FROM vault_files WHERE indexed_at > $1)\",\n    [sinceMs]\n  );\n  return r.rows.map(row => ({ sourcePath: row.source_path, targetRaw: row.target_raw, lineNumber: row.line_number }));\n}\n\nexport async function countVaultLinksWithPrefix(pool: Pool, prefix: string): Promise<number> {\n  const r = await pool.query<{ n: string }>(\"SELECT COUNT(*) AS n FROM vault_links WHERE source_path LIKE $1\", [`${prefix}%`]);\n  return Number(r.rows[0]?.n ?? 0);\n}\n\nexport async function countVaultLinksAfter(pool: Pool, sinceMs: number): Promise<number> {\n  const r = await pool.query<{ n: string }>(\n    \"SELECT COUNT(*) AS n FROM vault_links WHERE source_path IN (SELECT vault_path FROM vault_files WHERE indexed_at > $1)\",\n    [sinceMs]\n  );\n  return Number(r.rows[0]?.n ?? 0);\n}\n\nexport async function getVaultLinksFromPaths(pool: Pool, sourcePaths: string[]): Promise<VaultLinkRow[]> {\n  if (sourcePaths.length === 0) return [];\n  const placeholders = sourcePaths.map((_, i) => `$${i + 1}`).join(\", \");\n  const r = await pool.query<VaultLinkDbRow>(\n    `SELECT source_path, target_raw, target_path, link_type, line_number, confidence FROM vault_links WHERE source_path IN (${placeholders}) AND target_path IS NOT NULL`,\n    sourcePaths\n  );\n  return r.rows.map(mapVaultLinkRow);\n}\n\nexport async function getVaultLinkEdges(pool: Pool): Promise<Array<{ source: string; target: string }>> {\n  const r = await pool.query<{ source: string; target: string }>(\n    \"SELECT DISTINCT source_path AS source, target_path AS target FROM vault_links WHERE target_path IS NOT NULL\"\n  );\n  return r.rows;\n}\n\nexport async function getVaultLinkEdgesWithPrefix(pool: Pool, prefix: string): Promise<Array<{ source: string; target: string }>> {\n  const r = await pool.query<{ source: string; target: string }>(\n    \"SELECT DISTINCT source_path AS source, target_path AS target FROM vault_links WHERE target_path IS NOT NULL AND source_path LIKE $1\",\n    [`${prefix}%`]\n  );\n  return r.rows;\n}\n\nexport async function getVaultLinkEdgesAfter(pool: Pool, sinceMs: number): Promise<Array<{ source: string; target: string }>> {\n  const r = await pool.query<{ source: string; target: string }>(\n    \"SELECT DISTINCT source_path AS source, target_path AS target FROM vault_links WHERE target_path IS NOT NULL AND source_path IN (SELECT vault_path FROM vault_files WHERE indexed_at > $1)\",\n    [sinceMs]\n  );\n  return r.rows;\n}\n\n// ---------------------------------------------------------------------------\n// Vault health\n// ---------------------------------------------------------------------------\n\ntype VaultHealthDbRow = { vault_path: string; inbound_count: number; outbound_count: number; dead_link_count: number; is_orphan: number; computed_at: string };\n\nfunction mapVaultHealthRow(row: VaultHealthDbRow): VaultHealthRow {\n  return {\n    vaultPath: row.vault_path,\n    inboundCount: row.inbound_count,\n    outboundCount: row.outbound_count,\n    deadLinkCount: row.dead_link_count,\n    isOrphan: row.is_orphan === 1,\n    computedAt: Number(row.computed_at),\n  };\n}\n\nexport async function upsertVaultHealth(pool: Pool, rows: VaultHealthRow[]): Promise<void> {\n  if (rows.length === 0) return;\n  const client = await pool.connect();\n  try {\n    await client.query(\"BEGIN\");\n    for (const h of rows) {\n      await client.query(\n        `INSERT INTO vault_health (vault_path, inbound_count, outbound_count, dead_link_count, is_orphan, computed_at)\n         VALUES ($1, $2, $3, $4, $5, $6)\n         ON CONFLICT (vault_path) DO UPDATE SET\n           inbound_count = EXCLUDED.inbound_count,\n           outbound_count = EXCLUDED.outbound_count,\n           dead_link_count = EXCLUDED.dead_link_count,\n           is_orphan = EXCLUDED.is_orphan,\n           computed_at = EXCLUDED.computed_at`,\n        [h.vaultPath, h.inboundCount, h.outboundCount, h.deadLinkCount, h.isOrphan ? 1 : 0, h.computedAt]\n      );\n    }\n    await client.query(\"COMMIT\");\n  } catch (e) {\n    await client.query(\"ROLLBACK\");\n    throw e;\n  } finally {\n    client.release();\n  }\n}\n\nexport async function getVaultHealth(pool: Pool, vaultPath: string): Promise<VaultHealthRow | null> {\n  const r = await pool.query<VaultHealthDbRow>(\n    \"SELECT vault_path, inbound_count, outbound_count, dead_link_count, is_orphan, computed_at FROM vault_health WHERE vault_path = $1\",\n    [vaultPath]\n  );\n  return r.rows.length === 0 ? null : mapVaultHealthRow(r.rows[0]);\n}\n\nexport async function getOrphans(pool: Pool): Promise<VaultHealthRow[]> {\n  const r = await pool.query<VaultHealthDbRow>(\n    \"SELECT vault_path, inbound_count, outbound_count, dead_link_count, is_orphan, computed_at FROM vault_health WHERE is_orphan = 1\"\n  );\n  return r.rows.map(row => ({ ...mapVaultHealthRow(row), isOrphan: true }));\n}\n\nexport async function getOrphansWithPrefix(pool: Pool, prefix: string): Promise<string[]> {\n  const r = await pool.query<{ vault_path: string }>(\n    \"SELECT vault_path FROM vault_health WHERE is_orphan = 1 AND vault_path LIKE $1\",\n    [`${prefix}%`]\n  );\n  return r.rows.map(row => row.vault_path);\n}\n\nexport async function getOrphansAfter(pool: Pool, sinceMs: number): Promise<string[]> {\n  const r = await pool.query<{ vault_path: string }>(\n    \"SELECT vh.vault_path FROM vault_health vh JOIN vault_files vf ON vh.vault_path = vf.vault_path WHERE vh.is_orphan = 1 AND vf.indexed_at > $1\",\n    [sinceMs]\n  );\n  return r.rows.map(row => row.vault_path);\n}\n\nexport async function getLowConnectivity(pool: Pool): Promise<string[]> {\n  const r = await pool.query<{ vault_path: string }>(\n    \"SELECT vault_path FROM vault_health WHERE inbound_count + outbound_count <= 1\"\n  );\n  return r.rows.map(row => row.vault_path);\n}\n\nexport async function getLowConnectivityWithPrefix(pool: Pool, prefix: string): Promise<string[]> {\n  const r = await pool.query<{ vault_path: string }>(\n    \"SELECT vault_path FROM vault_health WHERE inbound_count + outbound_count <= 1 AND vault_path LIKE $1\",\n    [`${prefix}%`]\n  );\n  return r.rows.map(row => row.vault_path);\n}\n\nexport async function getLowConnectivityAfter(pool: Pool, sinceMs: number): Promise<string[]> {\n  const r = await pool.query<{ vault_path: string }>(\n    \"SELECT vh.vault_path FROM vault_health vh JOIN vault_files vf ON vh.vault_path = vf.vault_path WHERE vh.inbound_count + vh.outbound_count <= 1 AND vf.indexed_at > $1\",\n    [sinceMs]\n  );\n  return r.rows.map(row => row.vault_path);\n}\n\n// ---------------------------------------------------------------------------\n// Vault name index\n// ---------------------------------------------------------------------------\n\nexport async function upsertNameIndex(pool: Pool, entries: VaultNameEntry[]): Promise<void> {\n  if (entries.length === 0) return;\n  const client = await pool.connect();\n  try {\n    await client.query(\"BEGIN\");\n    for (const e of entries) {\n      await client.query(\n        `INSERT INTO vault_name_index (name, vault_path)\n         VALUES ($1, $2) ON CONFLICT (name, vault_path) DO NOTHING`,\n        [e.name, e.vaultPath]\n      );\n    }\n    await client.query(\"COMMIT\");\n  } catch (e_) {\n    await client.query(\"ROLLBACK\");\n    throw e_;\n  } finally {\n    client.release();\n  }\n}\n\nexport async function replaceNameIndex(pool: Pool, entries: VaultNameEntry[]): Promise<void> {\n  const client = await pool.connect();\n  try {\n    await client.query(\"BEGIN\");\n    await client.query(\"DELETE FROM vault_name_index\");\n    for (let i = 0; i < entries.length; i += 500) {\n      const batch = entries.slice(i, i + 500);\n      const values: string[] = [];\n      const params: string[] = [];\n      let idx = 1;\n      for (const e of batch) {\n        values.push(`($${idx++}, $${idx++})`);\n        params.push(e.name, e.vaultPath);\n      }\n      await client.query(\n        `INSERT INTO vault_name_index (name, vault_path) VALUES ${values.join(\", \")}`,\n        params\n      );\n    }\n    await client.query(\"COMMIT\");\n  } catch (e) {\n    await client.query(\"ROLLBACK\");\n    throw e;\n  } finally {\n    client.release();\n  }\n}\n\nexport async function resolveVaultName(pool: Pool, name: string): Promise<string[]> {\n  const r = await pool.query<{ vault_path: string }>(\n    \"SELECT vault_path FROM vault_name_index WHERE name = $1\",\n    [name]\n  );\n  return r.rows.map(row => row.vault_path);\n}\n\nexport async function searchVaultNameIndex(pool: Pool, query: string, limit = 100): Promise<string[]> {\n  const r = await pool.query<{ vault_path: string }>(\n    \"SELECT DISTINCT vault_path FROM vault_name_index WHERE lower(name) LIKE lower($1) LIMIT $2\",\n    [`%${query}%`, limit]\n  );\n  return r.rows.map(row => row.vault_path);\n}\n","/**\n * PostgresBackend — implements StorageBackend using PostgreSQL + pgvector.\n *\n * Vector similarity: pgvector's <=> cosine distance operator\n * Full-text search:  PostgreSQL tsvector/tsquery (replaces SQLite FTS5)\n * Connection pooling: node-postgres Pool\n *\n * Schema is auto-initialized on first connection if tables don't exist.\n * Per-user database isolation: each macOS user gets their own database (pai_<username>).\n */\n\nimport pg from \"pg\";\nimport type { Pool, PoolClient } from \"pg\";\nimport { readFileSync } from \"node:fs\";\nimport { join, dirname } from \"node:path\";\nimport { fileURLToPath } from \"node:url\";\nimport type {\n  StorageBackend, ChunkRow, FileRow, FederationStats,\n  VaultFileRow, VaultAliasRow, VaultLinkRow, VaultHealthRow, VaultNameEntry,\n} from \"../interface.js\";\nimport type { SearchResult, SearchOptions } from \"../../memory/search.js\";\nimport type { PostgresConfig } from \"./config.js\";\nimport { bufferToVector } from \"./helpers.js\";\nimport { searchKeyword, searchSemantic } from \"./search.js\";\nimport * as vault from \"./vault.js\";\n\nconst { Pool: PgPool } = pg;\n\nexport class PostgresBackend implements StorageBackend {\n  readonly backendType = \"postgres\" as const;\n\n  private pool: Pool;\n\n  /**\n   * Ensure the per-user database exists and has the required schema.\n   * Connects to the default 'postgres' database to CREATE DATABASE if needed,\n   * then connects to the target database to apply init.sql schema.\n   * Safe to call multiple times (fully idempotent).\n   */\n  static async ensureDatabase(config: PostgresConfig): Promise<void> {\n    const connStr =\n      config.connectionString ??\n      `postgresql://${config.user ?? \"pai\"}:${config.password ?? \"pai\"}@${config.host ?? \"localhost\"}:${config.port ?? 5432}/${config.database ?? \"pai\"}`;\n    const url = new URL(connStr);\n    const targetDb = url.pathname.slice(1);\n\n    const adminUrl = new URL(connStr);\n    adminUrl.pathname = \"/postgres\";\n    const adminPool = new PgPool({\n      connectionString: adminUrl.toString(),\n      max: 1,\n      connectionTimeoutMillis: 5000,\n    });\n\n    try {\n      const check = await adminPool.query(\n        \"SELECT 1 FROM pg_database WHERE datname = $1\",\n        [targetDb]\n      );\n      if (check.rowCount === 0) {\n        await adminPool.query(`CREATE DATABASE \"${targetDb}\"`);\n        process.stderr.write(`[pai-postgres] Created database: ${targetDb}\\n`);\n      }\n    } finally {\n      await adminPool.end();\n    }\n\n    const targetPool = new PgPool({\n      connectionString: connStr,\n      max: 1,\n      connectionTimeoutMillis: 5000,\n    });\n\n    try {\n      const tableCheck = await targetPool.query(\n        \"SELECT 1 FROM information_schema.tables WHERE table_name = 'pai_chunks'\"\n      );\n      if (tableCheck.rowCount === 0) {\n        const __dirname = dirname(fileURLToPath(import.meta.url));\n        const initSqlPath = join(__dirname, \"../../docker/init.sql\");\n        let initSql: string;\n        try {\n          initSql = readFileSync(initSqlPath, \"utf-8\");\n        } catch {\n          const altPath = join(__dirname, \"../docker/init.sql\");\n          initSql = readFileSync(altPath, \"utf-8\");\n        }\n        await targetPool.query(initSql);\n        process.stderr.write(`[pai-postgres] Applied schema to database: ${targetDb}\\n`);\n      }\n\n      // Run incremental migrations for existing databases\n      await PostgresBackend.runMigrations(targetPool);\n    } finally {\n      await targetPool.end();\n    }\n  }\n\n  /**\n   * Run incremental migrations for existing databases.\n   * Each migration is idempotent — safe to run on databases that already have the change.\n   */\n  private static async runMigrations(pool: Pool): Promise<void> {\n    // Migration: add confidence column to vault_links if it does not exist\n    const colCheck = await pool.query(\n      `SELECT 1 FROM information_schema.columns\n       WHERE table_name = 'vault_links' AND column_name = 'confidence'`\n    );\n    if (colCheck.rowCount === 0) {\n      await pool.query(\n        \"ALTER TABLE vault_links ADD COLUMN confidence TEXT NOT NULL DEFAULT 'EXTRACTED'\"\n      );\n      process.stderr.write(\"[pai-postgres] Migration: added confidence column to vault_links\\n\");\n    }\n\n    // Migration: create kg_triples table if it does not exist\n    const kgCheck = await pool.query(\n      `SELECT 1 FROM information_schema.tables WHERE table_name = 'kg_triples'`\n    );\n    if (kgCheck.rowCount === 0) {\n      await pool.query(`\n        CREATE TABLE kg_triples (\n          id             SERIAL PRIMARY KEY,\n          subject        TEXT NOT NULL,\n          predicate      TEXT NOT NULL,\n          object         TEXT NOT NULL,\n          project_id     INTEGER,\n          source_session TEXT,\n          valid_from     TIMESTAMP DEFAULT CURRENT_TIMESTAMP,\n          valid_to       TIMESTAMP,\n          confidence     TEXT DEFAULT 'EXTRACTED',\n          created_at     TIMESTAMP DEFAULT CURRENT_TIMESTAMP\n        )\n      `);\n      await pool.query(`CREATE INDEX idx_kg_subject   ON kg_triples(subject)`);\n      await pool.query(`CREATE INDEX idx_kg_predicate ON kg_triples(predicate)`);\n      await pool.query(`CREATE INDEX idx_kg_object    ON kg_triples(object)`);\n      await pool.query(`CREATE INDEX idx_kg_valid     ON kg_triples(valid_from, valid_to)`);\n      process.stderr.write(\"[pai-postgres] Migration: created kg_triples table\\n\");\n    }\n  }\n\n  constructor(config: PostgresConfig) {\n    const connStr =\n      config.connectionString ??\n      `postgresql://${config.user ?? \"pai\"}:${config.password ?? \"pai\"}@${config.host ?? \"localhost\"}:${config.port ?? 5432}/${config.database ?? \"pai\"}`;\n\n    this.pool = new PgPool({\n      connectionString: connStr,\n      max: config.maxConnections ?? 5,\n      connectionTimeoutMillis: config.connectionTimeoutMs ?? 5000,\n      idleTimeoutMillis: 30_000,\n    });\n\n    this.pool.on(\"error\", (err) => {\n      process.stderr.write(`[pai-postgres] Pool error: ${err.message}\\n`);\n    });\n  }\n\n  // -------------------------------------------------------------------------\n  // Lifecycle\n  // -------------------------------------------------------------------------\n\n  async close(): Promise<void> {\n    await this.pool.end();\n  }\n\n  /**\n   * Expose the underlying pg.Pool for callers that need direct query access\n   * (e.g. the daemon's observation IPC methods).\n   */\n  getPool(): Pool {\n    return this.pool;\n  }\n\n  async getStats(): Promise<FederationStats> {\n    const client = await this.pool.connect();\n    try {\n      const filesResult = await client.query<{ n: string }>(\n        \"SELECT COUNT(*)::text AS n FROM pai_files\"\n      );\n      const chunksResult = await client.query<{ n: string }>(\n        \"SELECT COUNT(*)::text AS n FROM pai_chunks\"\n      );\n      return {\n        files: parseInt(filesResult.rows[0]?.n ?? \"0\", 10),\n        chunks: parseInt(chunksResult.rows[0]?.n ?? \"0\", 10),\n      };\n    } finally {\n      client.release();\n    }\n  }\n\n  /**\n   * Test the connection by running a trivial query.\n   * Returns null on success, error message on failure.\n   */\n  async testConnection(): Promise<string | null> {\n    let client: PoolClient | null = null;\n    try {\n      client = await this.pool.connect();\n      await client.query(\"SELECT 1\");\n      return null;\n    } catch (e) {\n      return e instanceof Error ? e.message : String(e);\n    } finally {\n      client?.release();\n    }\n  }\n\n  // -------------------------------------------------------------------------\n  // File tracking\n  // -------------------------------------------------------------------------\n\n  async getFileHash(projectId: number, path: string): Promise<string | undefined> {\n    const result = await this.pool.query<{ hash: string }>(\n      \"SELECT hash FROM pai_files WHERE project_id = $1 AND path = $2\",\n      [projectId, path]\n    );\n    return result.rows[0]?.hash;\n  }\n\n  async upsertFile(file: FileRow): Promise<void> {\n    await this.pool.query(\n      `INSERT INTO pai_files (project_id, path, source, tier, hash, mtime, size)\n       VALUES ($1, $2, $3, $4, $5, $6, $7)\n       ON CONFLICT (project_id, path) DO UPDATE SET\n         source = EXCLUDED.source,\n         tier   = EXCLUDED.tier,\n         hash   = EXCLUDED.hash,\n         mtime  = EXCLUDED.mtime,\n         size   = EXCLUDED.size`,\n      [file.projectId, file.path, file.source, file.tier, file.hash, file.mtime, file.size]\n    );\n  }\n\n  // -------------------------------------------------------------------------\n  // Chunk management\n  // -------------------------------------------------------------------------\n\n  async getChunkIds(projectId: number, path: string): Promise<string[]> {\n    const result = await this.pool.query<{ id: string }>(\n      \"SELECT id FROM pai_chunks WHERE project_id = $1 AND path = $2\",\n      [projectId, path]\n    );\n    return result.rows.map((r) => r.id);\n  }\n\n  async deleteChunksForFile(projectId: number, path: string): Promise<void> {\n    await this.pool.query(\n      \"DELETE FROM pai_chunks WHERE project_id = $1 AND path = $2\",\n      [projectId, path]\n    );\n  }\n\n  async insertChunks(chunks: ChunkRow[]): Promise<void> {\n    if (chunks.length === 0) return;\n\n    const client = await this.pool.connect();\n    try {\n      await client.query(\"BEGIN\");\n\n      for (const c of chunks) {\n        const safeText = c.text.replace(/\\0/g, \"\");\n\n        await client.query(\n          `INSERT INTO pai_chunks\n             (id, project_id, source, tier, path, start_line, end_line, hash, text, updated_at, fts_vector)\n           VALUES\n             ($1, $2, $3, $4, $5, $6, $7, $8, $9, $10,\n              to_tsvector('simple', $9))\n           ON CONFLICT (id) DO UPDATE SET\n             project_id = EXCLUDED.project_id,\n             source     = EXCLUDED.source,\n             tier       = EXCLUDED.tier,\n             path       = EXCLUDED.path,\n             start_line = EXCLUDED.start_line,\n             end_line   = EXCLUDED.end_line,\n             hash       = EXCLUDED.hash,\n             text       = EXCLUDED.text,\n             updated_at = EXCLUDED.updated_at,\n             fts_vector = EXCLUDED.fts_vector`,\n          [\n            c.id, c.projectId, c.source, c.tier, c.path,\n            c.startLine, c.endLine, c.hash, safeText, c.updatedAt,\n          ]\n        );\n      }\n\n      await client.query(\"COMMIT\");\n    } catch (e) {\n      await client.query(\"ROLLBACK\");\n      throw e;\n    } finally {\n      client.release();\n    }\n  }\n\n  async getDistinctChunkPaths(projectId: number): Promise<string[]> {\n    const result = await this.pool.query<{ path: string }>(\n      \"SELECT DISTINCT path FROM pai_chunks WHERE project_id = $1\",\n      [projectId]\n    );\n    return result.rows.map((r) => r.path);\n  }\n\n  async deletePaths(projectId: number, paths: string[]): Promise<void> {\n    if (paths.length === 0) return;\n    const client = await this.pool.connect();\n    try {\n      await client.query(\"BEGIN\");\n      for (const path of paths) {\n        await client.query(\"DELETE FROM pai_chunks WHERE project_id = $1 AND path = $2\", [projectId, path]);\n        await client.query(\"DELETE FROM pai_files WHERE project_id = $1 AND path = $2\", [projectId, path]);\n      }\n      await client.query(\"COMMIT\");\n    } catch (e) {\n      await client.query(\"ROLLBACK\");\n      throw e;\n    } finally {\n      client.release();\n    }\n  }\n\n  async getUnembeddedChunkIds(projectId?: number, limit?: number): Promise<Array<{ id: string; text: string; project_id: number; path: string }>> {\n    const params: Array<number> = [];\n    let sql = \"SELECT id, text, project_id, path FROM pai_chunks WHERE embedding IS NULL\";\n    if (projectId !== undefined) {\n      params.push(projectId);\n      sql += ` AND project_id = $${params.length}`;\n    }\n    sql += \" ORDER BY project_id, id\";\n    if (limit !== undefined) {\n      params.push(limit);\n      sql += ` LIMIT $${params.length}`;\n    }\n    const result = await this.pool.query<{ id: string; text: string; project_id: number; path: string }>(sql, params);\n    return result.rows;\n  }\n\n  async updateEmbedding(chunkId: string, embedding: Buffer): Promise<void> {\n    const vec = bufferToVector(embedding);\n    const vecStr = \"[\" + vec.join(\",\") + \"]\";\n    await this.pool.query(\n      \"UPDATE pai_chunks SET embedding = $1::vector WHERE id = $2\",\n      [vecStr, chunkId]\n    );\n  }\n\n  // -------------------------------------------------------------------------\n  // Search\n  // -------------------------------------------------------------------------\n\n  async searchKeyword(query: string, opts?: SearchOptions): Promise<SearchResult[]> {\n    return searchKeyword(this.pool, query, opts);\n  }\n\n  async searchSemantic(queryEmbedding: Float32Array, opts?: SearchOptions): Promise<SearchResult[]> {\n    return searchSemantic(this.pool, queryEmbedding, opts);\n  }\n\n  // -------------------------------------------------------------------------\n  // Vault operations — delegated to vault.ts\n  // -------------------------------------------------------------------------\n\n  async upsertVaultFile(file: VaultFileRow): Promise<void> { return vault.upsertVaultFile(this.pool, file); }\n  async deleteVaultFile(vaultPath: string): Promise<void> { return vault.deleteVaultFile(this.pool, vaultPath); }\n  async getVaultFile(vaultPath: string): Promise<VaultFileRow | null> { return vault.getVaultFile(this.pool, vaultPath); }\n  async getVaultFileByInode(inode: number, device: number): Promise<VaultFileRow | null> { return vault.getVaultFileByInode(this.pool, inode, device); }\n  async getAllVaultFiles(): Promise<VaultFileRow[]> { return vault.getAllVaultFiles(this.pool); }\n  async getRecentVaultFiles(sinceMs: number): Promise<VaultFileRow[]> { return vault.getRecentVaultFiles(this.pool, sinceMs); }\n  async countVaultFiles(): Promise<number> { return vault.countVaultFiles(this.pool); }\n  async countVaultFilesWithPrefix(prefix: string): Promise<number> { return vault.countVaultFilesWithPrefix(this.pool, prefix); }\n  async countVaultFilesAfter(sinceMs: number): Promise<number> { return vault.countVaultFilesAfter(this.pool, sinceMs); }\n  async getVaultFilesByPaths(paths: string[]): Promise<VaultFileRow[]> { return vault.getVaultFilesByPaths(this.pool, paths); }\n  async getVaultFilesByPathsAfter(paths: string[], sinceMs: number): Promise<VaultFileRow[]> { return vault.getVaultFilesByPathsAfter(this.pool, paths, sinceMs); }\n  async getAllVaultFilePaths(): Promise<string[]> { return vault.getAllVaultFilePaths(this.pool); }\n  async getVaultFilePathsWithPrefix(prefix: string): Promise<string[]> { return vault.getVaultFilePathsWithPrefix(this.pool, prefix); }\n  async getVaultFilePathsAfter(sinceMs: number): Promise<string[]> { return vault.getVaultFilePathsAfter(this.pool, sinceMs); }\n\n  async upsertVaultAliases(aliases: VaultAliasRow[]): Promise<void> { return vault.upsertVaultAliases(this.pool, aliases); }\n  async deleteVaultAliases(canonicalPath: string): Promise<void> { return vault.deleteVaultAliases(this.pool, canonicalPath); }\n  async getVaultAlias(vaultPath: string): Promise<{ canonicalPath: string } | null> { return vault.getVaultAlias(this.pool, vaultPath); }\n\n  async replaceLinksForSources(sourcePaths: string[], links: VaultLinkRow[]): Promise<void> { return vault.replaceLinksForSources(this.pool, sourcePaths, links); }\n  async getLinksFromSource(sourcePath: string): Promise<VaultLinkRow[]> { return vault.getLinksFromSource(this.pool, sourcePath); }\n  async getLinksToTarget(targetPath: string): Promise<VaultLinkRow[]> { return vault.getLinksToTarget(this.pool, targetPath); }\n  async getVaultLinkGraph(): Promise<Array<{ source_path: string; target_path: string }>> { return vault.getVaultLinkGraph(this.pool); }\n  async getDeadLinks(): Promise<Array<{ sourcePath: string; targetRaw: string }>> { return vault.getDeadLinks(this.pool); }\n  async getDeadLinksWithLineNumbers(): Promise<Array<{ sourcePath: string; targetRaw: string; lineNumber: number }>> { return vault.getDeadLinksWithLineNumbers(this.pool); }\n  async getDeadLinksWithPrefix(prefix: string): Promise<Array<{ sourcePath: string; targetRaw: string; lineNumber: number }>> { return vault.getDeadLinksWithPrefix(this.pool, prefix); }\n  async getDeadLinksAfter(sinceMs: number): Promise<Array<{ sourcePath: string; targetRaw: string; lineNumber: number }>> { return vault.getDeadLinksAfter(this.pool, sinceMs); }\n  async countVaultLinksWithPrefix(prefix: string): Promise<number> { return vault.countVaultLinksWithPrefix(this.pool, prefix); }\n  async countVaultLinksAfter(sinceMs: number): Promise<number> { return vault.countVaultLinksAfter(this.pool, sinceMs); }\n  async getVaultLinksFromPaths(sourcePaths: string[]): Promise<VaultLinkRow[]> { return vault.getVaultLinksFromPaths(this.pool, sourcePaths); }\n  async getVaultLinkEdges(): Promise<Array<{ source: string; target: string }>> { return vault.getVaultLinkEdges(this.pool); }\n  async getVaultLinkEdgesWithPrefix(prefix: string): Promise<Array<{ source: string; target: string }>> { return vault.getVaultLinkEdgesWithPrefix(this.pool, prefix); }\n  async getVaultLinkEdgesAfter(sinceMs: number): Promise<Array<{ source: string; target: string }>> { return vault.getVaultLinkEdgesAfter(this.pool, sinceMs); }\n\n  async upsertVaultHealth(rows: VaultHealthRow[]): Promise<void> { return vault.upsertVaultHealth(this.pool, rows); }\n  async getVaultHealth(vaultPath: string): Promise<VaultHealthRow | null> { return vault.getVaultHealth(this.pool, vaultPath); }\n  async getOrphans(): Promise<VaultHealthRow[]> { return vault.getOrphans(this.pool); }\n  async getOrphansWithPrefix(prefix: string): Promise<string[]> { return vault.getOrphansWithPrefix(this.pool, prefix); }\n  async getOrphansAfter(sinceMs: number): Promise<string[]> { return vault.getOrphansAfter(this.pool, sinceMs); }\n  async getLowConnectivity(): Promise<string[]> { return vault.getLowConnectivity(this.pool); }\n  async getLowConnectivityWithPrefix(prefix: string): Promise<string[]> { return vault.getLowConnectivityWithPrefix(this.pool, prefix); }\n  async getLowConnectivityAfter(sinceMs: number): Promise<string[]> { return vault.getLowConnectivityAfter(this.pool, sinceMs); }\n\n  async upsertNameIndex(entries: VaultNameEntry[]): Promise<void> { return vault.upsertNameIndex(this.pool, entries); }\n  async replaceNameIndex(entries: VaultNameEntry[]): Promise<void> { return vault.replaceNameIndex(this.pool, entries); }\n  async resolveVaultName(name: string): Promise<string[]> { return vault.resolveVaultName(this.pool, name); }\n  async searchVaultNameIndex(query: string, limit?: number): Promise<string[]> { return vault.searchVaultNameIndex(this.pool, query, limit); }\n\n  // Legacy memory_chunks methods (used by graph and zettelkasten modules)\n  async getChunksWithEmbeddings(projectId: number, limit: number): Promise<Array<{ path: string; text: string; embedding: Buffer }>> {\n    const r = await this.pool.query<{ path: string; text: string; embedding: Buffer }>(\n      `SELECT path, text, embedding FROM memory_chunks WHERE project_id = $1 AND embedding IS NOT NULL ORDER BY path, start_line LIMIT $2`,\n  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package/docs/commands/README.md

@@ -104,6 +104,7 @@ Generated man pages for every `pai` command area. Read any page in the terminal
 | `pai project info <slug>` | Show full details for a project |
 | `pai project list` | Show the unified deduped listing (same as `pai`). |
 | `pai project list-raw` | Raw registry listing with slug, path, status, last_active columns |
+| `pai project merge <from> <into>` | Fold a duplicate project into another: move its sessions (renumbered), repoint its tags, aliases, compaction records and links, keep the old slug as an alias, then delete the row. Preview unless --execute is given. |
 | `pai project move <slug> <new-path>` | Update the root path for a project |
 | `pai project name <identifier> <shortname>` | Give a project a short name for quick access |
 | `pai project names` | List named projects (your curated shortlist) |
@@ -112,6 +113,7 @@ Generated man pages for every `pai` command area. Read any page in the terminal
 | `pai project tag <slug> <tags...>` | Add one or more tags to a project |
 | `pai project unarchive <slug>` | Restore an archived project to active status |
 | `pai project unname <shortname>` | Remove a project's short name |
+| `pai project unregister <slug>` | Remove a project row entirely, for paths that should never have been registered (worktrees, temp dirs). Refuses when the row holds sessions — merge those first. Preview unless --execute is given. The directory itself is never touched. |
 | `pai projects` | Manage registered projects (list, cd, add, info, ...) |
 | `pai projects add <path>` | Register a project directory in the PAI registry |
 | `pai projects alias <slug> <alias>` | Register an alternative slug for a project |
@@ -126,6 +128,7 @@ Generated man pages for every `pai` command area. Read any page in the terminal
 | `pai projects info <slug>` | Show full details for a project |
 | `pai projects list` | Show the unified deduped listing (same as `pai`). |
 | `pai projects list-raw` | Raw registry listing with slug, path, status, last_active columns |
+| `pai projects merge <from> <into>` | Fold a duplicate project into another: move its sessions (renumbered), repoint its tags, aliases, compaction records and links, keep the old slug as an alias, then delete the row. Preview unless --execute is given. |
 | `pai projects move <slug> <new-path>` | Update the root path for a project |
 | `pai projects name <identifier> <shortname>` | Give a project a short name for quick access |
 | `pai projects names` | List named projects (your curated shortlist) |
@@ -134,6 +137,7 @@ Generated man pages for every `pai` command area. Read any page in the terminal
 | `pai projects tag <slug> <tags...>` | Add one or more tags to a project |
 | `pai projects unarchive <slug>` | Restore an archived project to active status |
 | `pai projects unname <shortname>` | Remove a project's short name |
+| `pai projects unregister <slug>` | Remove a project row entirely, for paths that should never have been registered (worktrees, temp dirs). Refuses when the row holds sessions — merge those first. Preview unless --execute is given. The directory itself is never touched. |
 | `pai registry` | Registry maintenance: scan, migrate, stats, rebuild |
 | `pai registry dedupe` | Merge registry rows that describe the same project. |
 | `pai registry lookup` | Find the project slug for a filesystem path (for use in scripts) |

package/docs/commands/project.md

@@ -20,6 +20,8 @@ pai project <subcommand> [options]
 | [`pai project add <path>`](#pai-project-add-path) | Register a project directory in the PAI registry |
 | [`pai project info <slug>`](#pai-project-info-slug) | Show full details for a project |
 | [`pai project archive <slug>`](#pai-project-archive-slug) | Archive a project |
+| [`pai project merge <from> <into>`](#pai-project-merge-from-into) | Fold a duplicate project into another: move its sessions (renumbered), repoint its tags, aliases, compaction records and links, keep the old slug as an alias, then delete the row. Preview unless --execute is given. |
+| [`pai project unregister <slug>`](#pai-project-unregister-slug) | Remove a project row entirely, for paths that should never have been registered (worktrees, temp dirs). Refuses when the row holds sessions — merge those first. Preview unless --execute is given. The directory itself is never touched. |
 | [`pai project unarchive <slug>`](#pai-project-unarchive-slug) | Restore an archived project to active status |
 | [`pai project move <slug> <new-path>`](#pai-project-move-slug-new-path) | Update the root path for a project |
 | [`pai project rebind <slug> <new-path>`](#pai-project-rebind-slug-new-path) | Manually update the root_path for a project (for when auto-detect found multiple matches). |
@@ -119,6 +121,42 @@ Archive a project
 | `<slug>` | required |
 
 
+### pai project merge <from> <into>
+
+Fold a duplicate project into another: move its sessions (renumbered), repoint its tags, aliases, compaction records and links, keep the old slug as an alias, then delete the row. Preview unless --execute is given.
+
+**Arguments**
+
+| Argument | Kind |
+|----------|------|
+| `<from>` | required |
+| `<into>` | required |
+
+**Options**
+
+| Option | Description | Default |
+|--------|-------------|---------|
+| `--execute` | Actually perform the merge |  |
+
+
+### pai project unregister <slug>
+
+Remove a project row entirely, for paths that should never have been registered (worktrees, temp dirs). Refuses when the row holds sessions — merge those first. Preview unless --execute is given. The directory itself is never touched.
+
+**Arguments**
+
+| Argument | Kind |
+|----------|------|
+| `<slug>` | required |
+
+**Options**
+
+| Option | Description | Default |
+|--------|-------------|---------|
+| `--execute` | Actually remove the row |  |
+| `--force` | Remove even though sessions would be deleted with it |  |
+
+
 ### pai project unarchive <slug>
 
 Restore an archived project to active status

package/docs/commands/projects.md

@@ -20,6 +20,8 @@ pai projects <subcommand> [options]
 | [`pai projects add <path>`](#pai-projects-add-path) | Register a project directory in the PAI registry |
 | [`pai projects info <slug>`](#pai-projects-info-slug) | Show full details for a project |
 | [`pai projects archive <slug>`](#pai-projects-archive-slug) | Archive a project |
+| [`pai projects merge <from> <into>`](#pai-projects-merge-from-into) | Fold a duplicate project into another: move its sessions (renumbered), repoint its tags, aliases, compaction records and links, keep the old slug as an alias, then delete the row. Preview unless --execute is given. |
+| [`pai projects unregister <slug>`](#pai-projects-unregister-slug) | Remove a project row entirely, for paths that should never have been registered (worktrees, temp dirs). Refuses when the row holds sessions — merge those first. Preview unless --execute is given. The directory itself is never touched. |
 | [`pai projects unarchive <slug>`](#pai-projects-unarchive-slug) | Restore an archived project to active status |
 | [`pai projects move <slug> <new-path>`](#pai-projects-move-slug-new-path) | Update the root path for a project |
 | [`pai projects rebind <slug> <new-path>`](#pai-projects-rebind-slug-new-path) | Manually update the root_path for a project (for when auto-detect found multiple matches). |
@@ -119,6 +121,42 @@ Archive a project
 | `<slug>` | required |
 
 
+### pai projects merge <from> <into>
+
+Fold a duplicate project into another: move its sessions (renumbered), repoint its tags, aliases, compaction records and links, keep the old slug as an alias, then delete the row. Preview unless --execute is given.
+
+**Arguments**
+
+| Argument | Kind |
+|----------|------|
+| `<from>` | required |
+| `<into>` | required |
+
+**Options**
+
+| Option | Description | Default |
+|--------|-------------|---------|
+| `--execute` | Actually perform the merge |  |
+
+
+### pai projects unregister <slug>
+
+Remove a project row entirely, for paths that should never have been registered (worktrees, temp dirs). Refuses when the row holds sessions — merge those first. Preview unless --execute is given. The directory itself is never touched.
+
+**Arguments**
+
+| Argument | Kind |
+|----------|------|
+| `<slug>` | required |
+
+**Options**
+
+| Option | Description | Default |
+|--------|-------------|---------|
+| `--execute` | Actually remove the row |  |
+| `--force` | Remove even though sessions would be deleted with it |  |
+
+
 ### pai projects unarchive <slug>
 
 Restore an archived project to active status

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@tekmidian/pai",
-  "version": "0.31.0",
+  "version": "0.32.1",
   "description": "PAI Knowledge OS — Personal AI Infrastructure with federated memory and project management",
   "type": "module",
   "main": "dist/index.mjs",