@technomoron/agent-run 0.99.16 → 0.99.17

package/CHANGES

@@ -1,6 +1,11 @@
 CHANGES
 =======
 
+Version 0.99.17 (2026-05-06)
+----------------------------
+* Generate Codex native skills under `CODEX_HOME/skills` so runtime skill discovery matches generated profiles.
+* Remove stale legacy Codex skill copies from `live/.agents/skills` during profile updates.
+
 Version 0.99.16 (2026-05-03)
 ----------------------------
 * Move review history out of generated `live/` directories into persistent profile `reviews/` directories and migrate legacy live review files.

package/README.md

@@ -171,7 +171,7 @@ directory and rewrites generated files:
 - `AGENTS.md`
 - `CLAUDE.md`
 - `config.toml`
-- `.agents/skills/**`
+- `memories/codex-home/skills/**`
 - `.claude/**`
 - `bin/**`
 

package/dist/agent-run.js

@@ -1078,6 +1078,8 @@ function buildRenderContext(projectRoot, profileDir, configRoot, manifest, env)
         guardrails: manifest.guardrails
     };
     const reviewDir = resolveRuntimePath(configRoot, manifest.paths.reviewDir, env, baseContext);
+    const memoriesDir = resolveRuntimePath(configRoot, manifest.paths.memoriesDir, env, baseContext);
+    const codexHomeDir = path.join(memoriesDir, 'codex-home');
     const paths = {
         profileDir,
         liveDir,
@@ -1087,11 +1089,11 @@ function buildRenderContext(projectRoot, profileDir, configRoot, manifest, env)
         reviewConsolidatedFile: manifest.paths.reviewConsolidatedFile
             ? resolveRuntimePath(configRoot, manifest.paths.reviewConsolidatedFile, env, baseContext)
             : path.join(reviewDir, 'REVIEW.md'),
-        memoriesDir: resolveRuntimePath(configRoot, manifest.paths.memoriesDir, env, baseContext),
+        memoriesDir,
         globalMemoryDir: globalMemoryDir(configRoot),
-        codexHomeDir: path.join(resolveRuntimePath(configRoot, manifest.paths.memoriesDir, env, baseContext), 'codex-home'),
+        codexHomeDir,
         overridesDir: path.join(profileDir, 'overrides'),
-        codexSkillsDir: path.join(liveDir, '.agents', 'skills'),
+        codexSkillsDir: path.join(codexHomeDir, 'skills'),
         claudeSkillsDir: path.join(liveDir, '.claude', 'skills'),
         binDir: path.join(liveDir, 'bin')
     };
@@ -1445,13 +1447,27 @@ function syncRuntimeDirs(context) {
         fs.mkdirSync(dir, { recursive: true });
     }
     migrateLiveReviewFiles(context);
+    removeLegacyCodexSkillDirs(context);
     removeLegacyCodeReviewSkillDirs(context);
 }
+function removeLegacyCodexSkillDirs(context) {
+    const legacyCodexSkillsDir = path.join(context.paths.liveDir, '.agents', 'skills');
+    if (path.resolve(legacyCodexSkillsDir) === path.resolve(context.paths.codexSkillsDir)) {
+        return;
+    }
+    for (const skill of context.skills) {
+        const legacySkillDir = path.join(legacyCodexSkillsDir, skill.name);
+        if (fs.existsSync(legacySkillDir)) {
+            fs.rmSync(legacySkillDir, { recursive: true, force: true });
+        }
+    }
+}
 function removeLegacyCodeReviewSkillDirs(context) {
     if (!context.skills.some((skill) => skill.name === 'code-review-organizer')) {
         return;
     }
     for (const dir of [
+        path.join(context.paths.liveDir, '.agents', 'skills', 'code-review'),
         path.join(context.paths.codexSkillsDir, 'code-review'),
         path.join(context.paths.claudeSkillsDir, 'code-review')
     ]) {

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@technomoron/agent-run",
-  "version": "0.99.16",
+  "version": "0.99.17",
   "packageManager": "pnpm@10.28.1",
   "bin": {
     "agent-run": "dist/agent-run.js"